Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041037.t1 | XP_013466742.1 | 95.4 | 438 | 20 | 0 | 1 | 438 | 1 | 438 | 5.60E-241 | 843.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041037.t1 | Q9M3B4 | 55.2 | 446 | 180 | 8 | 1 | 436 | 1 | 436 | 3.3e-133 | 476.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041037.t1 | A0A072VH71 | 95.4 | 438 | 20 | 0 | 1 | 438 | 1 | 438 | 4.0e-241 | 843.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene041037 | MS.gene53503 | PPI |
| MS.gene041037 | MS.gene27974 | PPI |
| MS.gene041037 | MS.gene65332 | PPI |
| MS.gene041037 | MS.gene030899 | PPI |
| MS.gene72659 | MS.gene041037 | PPI |
| MS.gene004849 | MS.gene041037 | PPI |
| MS.gene041037 | MS.gene07384 | PPI |
| MS.gene066499 | MS.gene041037 | PPI |
| MS.gene85555 | MS.gene041037 | PPI |
| MS.gene64891 | MS.gene041037 | PPI |
| MS.gene52951 | MS.gene041037 | PPI |
| MS.gene05830 | MS.gene041037 | PPI |
| MS.gene69969 | MS.gene041037 | PPI |
| MS.gene041037 | MS.gene004394 | PPI |
| MS.gene96258 | MS.gene041037 | PPI |
| MS.gene99555 | MS.gene041037 | PPI |
| MS.gene47936 | MS.gene041037 | PPI |
| MS.gene041037 | MS.gene86544 | PPI |
| MS.gene002713 | MS.gene041037 | PPI |
| MS.gene23814 | MS.gene041037 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041037.t1 | MTR_1g034785 | 95.434 | 438 | 20 | 0 | 1 | 438 | 1 | 438 | 0.0 | 871 |
| MS.gene041037.t1 | MTR_7g016970 | 71.719 | 442 | 118 | 5 | 1 | 437 | 1 | 440 | 0.0 | 634 |
| MS.gene041037.t1 | MTR_4g103760 | 35.593 | 354 | 207 | 8 | 3 | 348 | 10 | 350 | 3.17e-68 | 225 |
| MS.gene041037.t1 | MTR_8g054430 | 27.430 | 463 | 264 | 17 | 2 | 445 | 3 | 412 | 1.30e-35 | 136 |
| MS.gene041037.t1 | MTR_4g119620 | 24.359 | 234 | 149 | 6 | 77 | 305 | 79 | 289 | 1.79e-15 | 77.4 |
| MS.gene041037.t1 | MTR_4g119620 | 23.980 | 196 | 134 | 4 | 116 | 310 | 25 | 206 | 4.81e-13 | 70.1 |
| MS.gene041037.t1 | MTR_1g072140 | 24.893 | 233 | 151 | 6 | 76 | 305 | 69 | 280 | 2.30e-15 | 77.0 |
| MS.gene041037.t1 | MTR_1g054300 | 27.174 | 276 | 134 | 12 | 82 | 314 | 167 | 418 | 2.86e-14 | 75.1 |
| MS.gene041037.t1 | MTR_4g007500 | 28.415 | 183 | 118 | 4 | 113 | 294 | 193 | 363 | 6.06e-14 | 73.6 |
| MS.gene041037.t1 | MTR_4g104380 | 23.182 | 220 | 147 | 3 | 86 | 305 | 240 | 437 | 1.18e-13 | 73.2 |
| MS.gene041037.t1 | MTR_7g076230 | 27.755 | 245 | 140 | 7 | 54 | 294 | 314 | 525 | 1.50e-13 | 73.6 |
| MS.gene041037.t1 | MTR_2g436510 | 22.973 | 222 | 146 | 7 | 77 | 297 | 213 | 410 | 1.53e-13 | 72.8 |
| MS.gene041037.t1 | MTR_2g034500 | 27.053 | 207 | 119 | 9 | 105 | 295 | 228 | 418 | 1.21e-12 | 70.9 |
| MS.gene041037.t1 | MTR_1g072740 | 25.397 | 189 | 115 | 5 | 109 | 293 | 284 | 450 | 4.36e-12 | 68.6 |
| MS.gene041037.t1 | MTR_4g102520 | 25.397 | 189 | 115 | 5 | 109 | 293 | 285 | 451 | 5.57e-12 | 68.2 |
| MS.gene041037.t1 | MTR_1g021590 | 29.730 | 222 | 121 | 10 | 114 | 326 | 215 | 410 | 1.35e-11 | 66.6 |
| MS.gene041037.t1 | MTR_1g087120 | 25.581 | 215 | 125 | 6 | 105 | 299 | 313 | 512 | 2.06e-11 | 67.0 |
| MS.gene041037.t1 | MTR_4g106480 | 27.434 | 226 | 131 | 7 | 114 | 328 | 176 | 379 | 5.05e-11 | 64.7 |
| MS.gene041037.t1 | MTR_8g092890 | 26.108 | 203 | 120 | 6 | 104 | 295 | 219 | 402 | 6.00e-11 | 65.1 |
| MS.gene041037.t1 | MTR_7g086360 | 22.764 | 246 | 170 | 6 | 78 | 320 | 100 | 328 | 9.07e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041037.t1 | AT3G49180 | 55.481 | 447 | 177 | 9 | 1 | 436 | 1 | 436 | 3.48e-173 | 493 |
| MS.gene041037.t1 | AT2G47410 | 28.761 | 226 | 129 | 9 | 105 | 318 | 41 | 246 | 8.86e-14 | 74.3 |
| MS.gene041037.t1 | AT2G47410 | 28.761 | 226 | 129 | 9 | 105 | 318 | 223 | 428 | 9.79e-14 | 74.3 |
| MS.gene041037.t1 | AT2G47410 | 28.761 | 226 | 129 | 9 | 105 | 318 | 222 | 427 | 1.01e-13 | 74.3 |
| MS.gene041037.t1 | AT4G02730 | 23.411 | 299 | 178 | 10 | 66 | 324 | 31 | 318 | 1.28e-13 | 72.0 |
| MS.gene041037.t1 | AT2G47410 | 27.234 | 235 | 131 | 8 | 105 | 318 | 41 | 256 | 1.30e-13 | 73.9 |
| MS.gene041037.t1 | AT2G47410 | 27.234 | 235 | 131 | 8 | 105 | 318 | 41 | 256 | 1.30e-13 | 73.9 |
| MS.gene041037.t1 | AT4G15900 | 22.523 | 222 | 147 | 7 | 77 | 297 | 219 | 416 | 1.49e-13 | 72.8 |
| MS.gene041037.t1 | AT2G47410 | 27.234 | 235 | 131 | 8 | 105 | 318 | 223 | 438 | 1.58e-13 | 73.6 |
| MS.gene041037.t1 | AT3G50390 | 33.690 | 187 | 86 | 8 | 117 | 293 | 210 | 368 | 1.43e-12 | 69.7 |
| MS.gene041037.t1 | AT1G58230 | 23.460 | 341 | 201 | 10 | 3 | 320 | 2063 | 2366 | 2.58e-12 | 69.7 |
| MS.gene041037.t1 | AT1G58230 | 23.754 | 341 | 200 | 11 | 3 | 320 | 2269 | 2572 | 3.05e-12 | 69.7 |
| MS.gene041037.t1 | AT1G58230 | 23.460 | 341 | 201 | 10 | 3 | 320 | 2269 | 2572 | 3.08e-12 | 69.7 |
| MS.gene041037.t1 | AT1G24130 | 30.270 | 185 | 105 | 8 | 114 | 293 | 188 | 353 | 4.68e-12 | 67.8 |
| MS.gene041037.t1 | AT5G50230 | 23.394 | 218 | 144 | 4 | 88 | 305 | 238 | 432 | 6.58e-12 | 67.8 |
| MS.gene041037.t1 | AT1G15440 | 26.400 | 250 | 156 | 7 | 85 | 331 | 315 | 539 | 8.36e-12 | 67.8 |
| MS.gene041037.t1 | AT1G15440 | 26.400 | 250 | 156 | 7 | 85 | 331 | 355 | 579 | 9.96e-12 | 67.8 |
| MS.gene041037.t1 | AT3G49660 | 23.333 | 240 | 160 | 7 | 78 | 314 | 73 | 291 | 1.69e-11 | 65.5 |
| MS.gene041037.t1 | AT3G49660 | 26.339 | 224 | 123 | 8 | 85 | 296 | 122 | 315 | 5.15e-11 | 63.9 |
| MS.gene041037.t1 | AT3G18130 | 24.675 | 231 | 146 | 6 | 79 | 305 | 66 | 272 | 5.05e-11 | 64.3 |
Find 97 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGGGAATTTGTTAATTTC+TGG | 0.180820 | 1.2:+19484141 | MS.gene041037:CDS |
| ATCACCACTGCTGATAATTA+TGG | 0.213558 | 1.2:+19483943 | MS.gene041037:CDS |
| TATGAGAACTTGCACGAATT+TGG | 0.227639 | 1.2:+19485861 | MS.gene041037:CDS |
| GTGAAGTATGGAGGTTGTTT+TGG | 0.285280 | 1.2:+19480743 | None:intergenic |
| TAATCACATTAAGGAGCTTC+AGG | 0.315950 | 1.2:+19485464 | MS.gene041037:CDS |
| CTTGCACGAATTTGGTATAA+AGG | 0.332053 | 1.2:+19485869 | MS.gene041037:CDS |
| GTGGGAATTTGTTAATTTCT+GGG | 0.342559 | 1.2:+19484142 | MS.gene041037:CDS |
| TGTGATATCTAATCACATTA+AGG | 0.353822 | 1.2:+19485455 | MS.gene041037:CDS |
| ACAACAAGAATATTAGTTAT+AGG | 0.359437 | 1.2:-19485249 | None:intergenic |
| GATGACTCACTGCTGATATC+TGG | 0.365366 | 1.2:+19482741 | MS.gene041037:CDS |
| ATTTGGTATAAAGGAGCTAT+TGG | 0.374097 | 1.2:+19485878 | MS.gene041037:CDS |
| TAGCCATCTCCATTGTCCTT+TGG | 0.382041 | 1.2:-19485821 | None:intergenic |
| ACAATGGCATTAATTATTGA+TGG | 0.388339 | 1.2:-19483841 | None:intergenic |
| AGGATGGAATAGTTCGTGTT+TGG | 0.400519 | 1.2:+19484169 | MS.gene041037:CDS |
| TTCCATGGCCTTGTCTCTCT+CGG | 0.403999 | 1.2:+19480852 | MS.gene041037:CDS |
| ATTATTTGTAAGGTTGAAAC+TGG | 0.404070 | 1.2:+19482657 | MS.gene041037:intron |
| AAGATGGATATGTAAGAGTT+TGG | 0.419112 | 1.2:+19482769 | MS.gene041037:CDS |
| AATAATTAATGCCATTGTCT+TGG | 0.429313 | 1.2:+19483846 | MS.gene041037:CDS |
| GCCTCTTCCTCTGTTGACGA+TGG | 0.429881 | 1.2:+19480765 | MS.gene041037:CDS |
| CTGATATCTGGTTCTGAAGA+TGG | 0.441099 | 1.2:+19482753 | MS.gene041037:CDS |
| TCACCACTGCTGATAATTAT+GGG | 0.441219 | 1.2:+19483944 | MS.gene041037:CDS |
| GTCCGGTGATATATACTTGT+GGG | 0.442984 | 1.2:+19481648 | MS.gene041037:CDS |
| CGCATGTTTAAACATGCTAA+AGG | 0.445611 | 1.2:+19484216 | MS.gene041037:CDS |
| TTAGAAGATGTACGATTGCT+TGG | 0.449877 | 1.2:-19485288 | None:intergenic |
| GTCTTATTTACTCCCTCCAT+TGG | 0.455842 | 1.2:+19485338 | MS.gene041037:CDS |
| CTGGCAGATTGCTTAAGAAA+TGG | 0.457303 | 1.2:+19482676 | MS.gene041037:CDS |
| AGAAATGGCATGCTCATTTG+AGG | 0.457810 | 1.2:+19482691 | MS.gene041037:CDS |
| TTTGAGGGCCGTCACTTGCC+TGG | 0.460055 | 1.2:+19482707 | MS.gene041037:CDS |
| ATCAGACGATCGGACGTGTA+AGG | 0.460520 | 1.2:+19483271 | MS.gene041037:CDS |
| GGTTGTTGGGACCTTCATAC+AGG | 0.466610 | 1.2:+19480792 | MS.gene041037:CDS |
| TTGACGATGGGATAGGTTGT+TGG | 0.469907 | 1.2:+19480778 | MS.gene041037:CDS |
| CTAGTTGGCGGAGCTTTGTC+CGG | 0.476553 | 1.2:+19481631 | MS.gene041037:CDS |
| CTCCATCTCGATTTCAGAAG+CGG | 0.478651 | 1.2:-19485781 | None:intergenic |
| CTATCAACCTAGGTGATAGC+AGG | 0.478817 | 1.2:+19485400 | MS.gene041037:CDS |
| TTAATTTCTGGGTCTGAGGA+TGG | 0.480417 | 1.2:+19484153 | MS.gene041037:CDS |
| AAGAAAACAGAAGCAGAAGA+AGG | 0.480574 | 1.2:-19480909 | None:intergenic |
| TTTCTTCTGGTCCTTCTCCA+AGG | 0.483192 | 1.2:+19480926 | MS.gene041037:CDS |
| TAGAAGATGTACGATTGCTT+GGG | 0.483277 | 1.2:-19485287 | None:intergenic |
| TCCTCTGTTGACGATGGGAT+AGG | 0.500735 | 1.2:+19480771 | MS.gene041037:CDS |
| TCATGTTCTTCACCTTTCCA+TGG | 0.503394 | 1.2:+19480837 | MS.gene041037:CDS |
| GAAATGGCATGCTCATTTGA+GGG | 0.512057 | 1.2:+19482692 | MS.gene041037:CDS |
| ACTGATGTTGTGATTGGTAA+TGG | 0.514197 | 1.2:+19483221 | MS.gene041037:CDS |
| CAATGGCATTAATTATTGAT+GGG | 0.515934 | 1.2:-19483840 | None:intergenic |
| TGACGATGGGATAGGTTGTT+GGG | 0.516644 | 1.2:+19480779 | MS.gene041037:CDS |
| CCTCTTCCTCTGTTGACGAT+GGG | 0.518306 | 1.2:+19480766 | MS.gene041037:CDS |
| CGCGTAACTGATGTTGTGAT+TGG | 0.519045 | 1.2:+19483215 | MS.gene041037:CDS |
| AGGTGATAGCAGGGGATGCA+TGG | 0.521018 | 1.2:+19485410 | MS.gene041037:CDS |
| CCCATCGTCAACAGAGGAAG+AGG | 0.523292 | 1.2:-19480766 | None:intergenic |
| TTATTTGTCATCTTCATCGA+AGG | 0.524621 | 1.2:-19485919 | None:intergenic |
| CCCCTTGCTGCTAATCATCA+AGG | 0.525393 | 1.2:+19481601 | MS.gene041037:CDS |
| CATCAAGGAACATATCTAGT+TGG | 0.526932 | 1.2:+19481616 | MS.gene041037:CDS |
| TTTGTTAATTTCTGGGTCTG+AGG | 0.529152 | 1.2:+19484149 | MS.gene041037:CDS |
| TATTTGATGATTTGAGAAGC+CGG | 0.531299 | 1.2:+19483147 | MS.gene041037:CDS |
| GCATAAAACACATGTTCAGC+TGG | 0.534177 | 1.2:-19483871 | None:intergenic |
| TGCTTAGCATATAGCAAAGG+TGG | 0.536767 | 1.2:+19484123 | MS.gene041037:CDS |
| TCCTTGATGATTAGCAGCAA+GGG | 0.537506 | 1.2:-19481602 | None:intergenic |
| TTCCTTGATGATTAGCAGCA+AGG | 0.539334 | 1.2:-19481603 | None:intergenic |
| AGAAAACAGAAGCAGAAGAA+GGG | 0.541561 | 1.2:-19480908 | None:intergenic |
| AACCGAGAGAGACAAGGCCA+TGG | 0.553818 | 1.2:-19480854 | None:intergenic |
| GTTGCTCAGCACCTGTATGA+AGG | 0.555551 | 1.2:-19480803 | None:intergenic |
| TGTCCGGTGATATATACTTG+TGG | 0.562629 | 1.2:+19481647 | MS.gene041037:CDS |
| TAGATAAAATACCTTGGAGA+AGG | 0.564747 | 1.2:-19480937 | None:intergenic |
| CAAGGAACATATCTAGTTGG+CGG | 0.571699 | 1.2:+19481619 | MS.gene041037:CDS |
| ATTTGATGATTTGAGAAGCC+GGG | 0.571886 | 1.2:+19483148 | MS.gene041037:CDS |
| AGAAAATACCAGGCAAGTGA+CGG | 0.572365 | 1.2:-19482715 | None:intergenic |
| GGTATAAAGGAGCTATTGGA+TGG | 0.575688 | 1.2:+19485882 | MS.gene041037:CDS |
| AATTATGGGATGCATATCAC+TGG | 0.576852 | 1.2:+19483958 | MS.gene041037:CDS |
| AACTAAAGCACGAGTACCAA+AGG | 0.577418 | 1.2:+19485805 | MS.gene041037:CDS |
| CACAACATCAGTTACGCGCA+TGG | 0.580262 | 1.2:-19483210 | None:intergenic |
| AGGGGCTTAATAGCTTCAGC+AGG | 0.582260 | 1.2:-19481583 | None:intergenic |
| CTCCCACAAGTATATATCAC+CGG | 0.584664 | 1.2:-19481650 | None:intergenic |
| TAGTTTCAGCATCAGACGAT+CGG | 0.588292 | 1.2:+19483261 | MS.gene041037:CDS |
| CCTTGATGATTAGCAGCAAG+GGG | 0.595743 | 1.2:-19481601 | None:intergenic |
| CAATGGAGATGGCTAACCAA+TGG | 0.599592 | 1.2:+19485829 | MS.gene041037:CDS |
| AGAGAGACAAGGCCATGGAA+AGG | 0.599801 | 1.2:-19480849 | None:intergenic |
| AGTCATCATCAGAAAATACC+AGG | 0.602655 | 1.2:-19482725 | None:intergenic |
| AGCGAGAACCGAGAGAGACA+AGG | 0.602699 | 1.2:-19480860 | None:intergenic |
| TCATCTATTTCTCAGCAACA+AGG | 0.603240 | 1.2:+19485750 | MS.gene041037:intron |
| TTAAAGACTGCTATCAACCT+AGG | 0.603770 | 1.2:+19485390 | MS.gene041037:CDS |
| CGCCGCTTCTGAAATCGAGA+TGG | 0.614970 | 1.2:+19485779 | MS.gene041037:CDS |
| GCTTAGCATATAGCAAAGGT+GGG | 0.621169 | 1.2:+19484124 | MS.gene041037:CDS |
| GTACCAAAGGACAATGGAGA+TGG | 0.632040 | 1.2:+19485818 | MS.gene041037:CDS |
| TGCATCCCCTGCTATCACCT+AGG | 0.634465 | 1.2:-19485407 | None:intergenic |
| TAGGTATGGAGCTTAGCGAA+AGG | 0.634540 | 1.2:+19483793 | MS.gene041037:intron |
| ACTTGCTTAGCATATAGCAA+AGG | 0.635996 | 1.2:+19484120 | MS.gene041037:CDS |
| CATCCCATAATTATCAGCAG+TGG | 0.638180 | 1.2:-19483947 | None:intergenic |
| GCACGAGTACCAAAGGACAA+TGG | 0.644048 | 1.2:+19485812 | MS.gene041037:CDS |
| TATCAACCTAGGTGATAGCA+GGG | 0.648083 | 1.2:+19485401 | MS.gene041037:CDS |
| GATGTTGTGATTGGTAATGG+AGG | 0.655310 | 1.2:+19483224 | MS.gene041037:CDS |
| TTCAGCTGGATCCAAGACAA+TGG | 0.658383 | 1.2:-19483857 | None:intergenic |
| ACCTATCCCATCGTCAACAG+AGG | 0.658456 | 1.2:-19480772 | None:intergenic |
| CGGTGATATATACTTGTGGG+AGG | 0.658844 | 1.2:+19481651 | MS.gene041037:CDS |
| AAGCTCTTAACTTCAACTTG+CGG | 0.660819 | 1.2:-19481559 | None:intergenic |
| ATAAAGGAGCTATTGGATGG+TGG | 0.682514 | 1.2:+19485885 | MS.gene041037:CDS |
| CATCTCGATTTCAGAAGCGG+CGG | 0.696583 | 1.2:-19485778 | None:intergenic |
| ATGTTGTGATTGGTAATGGA+GGG | 0.698348 | 1.2:+19483225 | MS.gene041037:CDS |
| ATCAACCTAGGTGATAGCAG+GGG | 0.734418 | 1.2:+19485402 | MS.gene041037:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTAAAAAAAAGAAAAATA+AGG | + | chr1.2:19482500-19482519 | MS.gene041037:intron | 10.0% |
| !! | ACAAAAAAATAAAATAACAA+AGG | - | chr1.2:19480965-19480984 | None:intergenic | 10.0% |
| !! | TTTCTAAATAACAATAATAA+TGG | - | chr1.2:19481476-19481495 | None:intergenic | 10.0% |
| !! | AATAATTAAATGTAATGACA+AGG | + | chr1.2:19481210-19481229 | MS.gene041037:intron | 15.0% |
| !! | ACATGAAAATTGTAAAAAAA+TGG | - | chr1.2:19485645-19485664 | None:intergenic | 15.0% |
| !! | ATAATTAAATGTAATGACAA+GGG | + | chr1.2:19481211-19481230 | MS.gene041037:intron | 15.0% |
| !! | ATTGTCTAATCAAAATTAAA+TGG | - | chr1.2:19484842-19484861 | None:intergenic | 15.0% |
| !! | TATTATAGTTTATTCTTAGA+TGG | + | chr1.2:19485154-19485173 | MS.gene041037:intron | 15.0% |
| !! | TTAATTTCTATGCTTATATA+TGG | + | chr1.2:19485128-19485147 | MS.gene041037:intron | 15.0% |
| !! | TTTAGAAAAATAGTAATCAA+TGG | + | chr1.2:19483324-19483343 | MS.gene041037:intron | 15.0% |
| !!! | AAATTTTCAAATAGTATAGA+TGG | - | chr1.2:19483385-19483404 | None:intergenic | 15.0% |
| !!! | AACTTTTTTTCCTTTTATTT+TGG | + | chr1.2:19483051-19483070 | MS.gene041037:intron | 15.0% |
| !!! | ACTTTTTTTCCTTTTATTTT+GGG | + | chr1.2:19483052-19483071 | MS.gene041037:intron | 15.0% |
| !!! | TGATTTATTTTCTTTTTTCT+AGG | + | chr1.2:19483774-19483793 | MS.gene041037:intron | 15.0% |
| !!! | TTGAAAATTTTAGTCATTTA+TGG | + | chr1.2:19483395-19483414 | MS.gene041037:intron | 15.0% |
| !!! | TTTCTTTTTTTTAGTTATTG+AGG | - | chr1.2:19482496-19482515 | None:intergenic | 15.0% |
| !! | AAAAACTATGTATTGAAAGT+GGG | + | chr1.2:19482591-19482610 | MS.gene041037:intron | 20.0% |
| !! | ACAACAAGAATATTAGTTAT+AGG | - | chr1.2:19485252-19485271 | None:intergenic | 20.0% |
| !! | AGTGATAACTAACAATTAAT+GGG | + | chr1.2:19484439-19484458 | MS.gene041037:intron | 20.0% |
| !! | ATGAACAAATTATTATTGTC+TGG | - | chr1.2:19483641-19483660 | None:intergenic | 20.0% |
| !! | ATTAAGTAGTTTATCTAAAC+AGG | - | chr1.2:19481811-19481830 | None:intergenic | 20.0% |
| !! | ATTACTAACAAGATTCATTT+AGG | + | chr1.2:19481365-19481384 | MS.gene041037:intron | 20.0% |
| !! | GTATATTATCCCAAAATAAA+AGG | - | chr1.2:19483064-19483083 | None:intergenic | 20.0% |
| !! | GTCACAATTAAATTAGTTAA+TGG | - | chr1.2:19485717-19485736 | None:intergenic | 20.0% |
| !! | TAAAAAAGACTGATAACTAT+AGG | - | chr1.2:19485507-19485526 | None:intergenic | 20.0% |
| !! | TTAAGTAGTTTATCTAAACA+GGG | - | chr1.2:19481810-19481829 | None:intergenic | 20.0% |
| !! | TTACTAACAAGATTCATTTA+GGG | + | chr1.2:19481366-19481385 | MS.gene041037:intron | 20.0% |
| !!! | AATCATTTAGAGTATATTGA+AGG | - | chr1.2:19485087-19485106 | None:intergenic | 20.0% |
| !!! | ATGTTGATTATTATAAGTCA+GGG | - | chr1.2:19484645-19484664 | None:intergenic | 20.0% |
| !!! | TAATTTTTTTTCTTCCCATT+TGG | + | chr1.2:19484056-19484075 | MS.gene041037:intron | 20.0% |
| !!! | TATGATTGGATGTAAAATTT+TGG | - | chr1.2:19482542-19482561 | None:intergenic | 20.0% |
| !!! | TATTTTCTTTTTTCTAGGTA+TGG | + | chr1.2:19483779-19483798 | MS.gene041037:intron | 20.0% |
| !!! | TTTAGATCAAGAGTTTTAAA+CGG | + | chr1.2:19481763-19481782 | MS.gene041037:intron | 20.0% |
| ! | AAAAATTAGAGGACATCAAA+AGG | - | chr1.2:19484044-19484063 | None:intergenic | 25.0% |
| ! | AAAATGTTCAATCTGAATGT+TGG | - | chr1.2:19485564-19485583 | None:intergenic | 25.0% |
| ! | AAGCATCCACAAAAAAAAAT+GGG | + | chr1.2:19485316-19485335 | MS.gene041037:CDS | 25.0% |
| ! | AATAATTAATGCCATTGTCT+TGG | + | chr1.2:19483846-19483865 | MS.gene041037:CDS | 25.0% |
| ! | AATAGCTATGTTGTTAGTAA+CGG | + | chr1.2:19481951-19481970 | MS.gene041037:intron | 25.0% |
| ! | AATTGATTAGATGATAAGTG+AGG | + | chr1.2:19481494-19481513 | MS.gene041037:intron | 25.0% |
| ! | ACAATGGCATTAATTATTGA+TGG | - | chr1.2:19483844-19483863 | None:intergenic | 25.0% |
| ! | ATGGGAAGAAAAAAAATTAG+AGG | - | chr1.2:19484055-19484074 | None:intergenic | 25.0% |
| ! | ATTATTTGTAAGGTTGAAAC+TGG | + | chr1.2:19482657-19482676 | MS.gene041037:intron | 25.0% |
| ! | CAATGGCATTAATTATTGAT+GGG | - | chr1.2:19483843-19483862 | None:intergenic | 25.0% |
| ! | GAAAAACTATGTATTGAAAG+TGG | + | chr1.2:19482590-19482609 | MS.gene041037:intron | 25.0% |
| ! | GAGTGATAACTAACAATTAA+TGG | + | chr1.2:19484438-19484457 | MS.gene041037:intron | 25.0% |
| ! | GGAATGTTTATTCAACTTAA+TGG | + | chr1.2:19481713-19481732 | MS.gene041037:intron | 25.0% |
| ! | TAACAATTGAACTTAACAGT+GGG | - | chr1.2:19484705-19484724 | None:intergenic | 25.0% |
| ! | TAATGACTGAACTTAACAAA+GGG | + | chr1.2:19484942-19484961 | MS.gene041037:intron | 25.0% |
| ! | TCAACAGTAAAGATAGTTTA+GGG | - | chr1.2:19482134-19482153 | None:intergenic | 25.0% |
| ! | TGTGATATCTAATCACATTA+AGG | + | chr1.2:19485455-19485474 | MS.gene041037:CDS | 25.0% |
| ! | TTCAAATAGTATCAACTTGT+CGG | - | chr1.2:19481182-19481201 | None:intergenic | 25.0% |
| !! | ATTGGATGTAAAATTTTGGA+GGG | - | chr1.2:19482538-19482557 | None:intergenic | 25.0% |
| !! | CATGTTGATTATTATAAGTC+AGG | - | chr1.2:19484646-19484665 | None:intergenic | 25.0% |
| !! | GAATTTGCATATTTTTCCAA+TGG | - | chr1.2:19485357-19485376 | None:intergenic | 25.0% |
| !! | TCTTTACGAGTATAGTTTTT+CGG | + | chr1.2:19483181-19483200 | MS.gene041037:CDS | 25.0% |
| !!! | ATAAGACCCATTTTTTTTTG+TGG | - | chr1.2:19485325-19485344 | None:intergenic | 25.0% |
| !!! | TTAGATCAAGAGTTTTAAAC+GGG | + | chr1.2:19481764-19481783 | MS.gene041037:intron | 25.0% |
| AAAAACCCTATTCCTTCATT+TGG | + | chr1.2:19482189-19482208 | MS.gene041037:intron | 30.0% | |
| AAAGGAAAAGTTCATGACAT+AGG | - | chr1.2:19484369-19484388 | None:intergenic | 30.0% | |
| AAATAGTCGCACTATAACAT+TGG | - | chr1.2:19483589-19483608 | None:intergenic | 30.0% | |
| AACAAAGGGAGCTTATTAAA+TGG | + | chr1.2:19484956-19484975 | MS.gene041037:intron | 30.0% | |
| AAGATGGATATGTAAGAGTT+TGG | + | chr1.2:19482769-19482788 | MS.gene041037:CDS | 30.0% | |
| AAGGAGTAGATAAAATACCT+TGG | - | chr1.2:19480946-19480965 | None:intergenic | 30.0% | |
| ACACACCAAAATATAGACTT+AGG | - | chr1.2:19482352-19482371 | None:intergenic | 30.0% | |
| ACTGACATACATATGAATAC+CGG | - | chr1.2:19485681-19485700 | None:intergenic | 30.0% | |
| AGTAGTTAACATTGAAGAAG+AGG | + | chr1.2:19482212-19482231 | MS.gene041037:intron | 30.0% | |
| AGTTGCATGCATTATTTGTA+AGG | + | chr1.2:19482647-19482666 | MS.gene041037:intron | 30.0% | |
| ATATAGACTTAGGTCATGTT+TGG | - | chr1.2:19482342-19482361 | None:intergenic | 30.0% | |
| ATGTATTGAAAGTGGGAAAT+TGG | + | chr1.2:19482598-19482617 | MS.gene041037:intron | 30.0% | |
| ATGTTAACTACTCCAAATGA+AGG | - | chr1.2:19482204-19482223 | None:intergenic | 30.0% | |
| ATTTGGTATAAAGGAGCTAT+TGG | + | chr1.2:19485878-19485897 | MS.gene041037:CDS | 30.0% | |
| CAAGCATCCACAAAAAAAAA+TGG | + | chr1.2:19485315-19485334 | MS.gene041037:CDS | 30.0% | |
| CATACAAGCTTTACTAAACA+TGG | - | chr1.2:19484320-19484339 | None:intergenic | 30.0% | |
| CTAACAATTGAACTTAACAG+TGG | - | chr1.2:19484706-19484725 | None:intergenic | 30.0% | |
| CTAATACCGCAAAAAGTTTA+GGG | - | chr1.2:19482565-19482584 | None:intergenic | 30.0% | |
| CTAATGACTGAACTTAACAA+AGG | + | chr1.2:19484941-19484960 | MS.gene041037:intron | 30.0% | |
| CTCAACAGTAAAGATAGTTT+AGG | - | chr1.2:19482135-19482154 | None:intergenic | 30.0% | |
| CTGTTAATCAATTTAGTCCA+TGG | + | chr1.2:19481341-19481360 | MS.gene041037:intron | 30.0% | |
| CTTCTTATTGAACGTATCTT+AGG | - | chr1.2:19481261-19481280 | None:intergenic | 30.0% | |
| GAATCTTGTTAGTAATTCCA+TGG | - | chr1.2:19481361-19481380 | None:intergenic | 30.0% | |
| GATAACTAACAATTAATGGG+TGG | + | chr1.2:19484442-19484461 | MS.gene041037:intron | 30.0% | |
| GGCATAAACTTCATGAAATA+TGG | + | chr1.2:19484242-19484261 | MS.gene041037:intron | 30.0% | |
| GTAGTTAACATTGAAGAAGA+GGG | + | chr1.2:19482213-19482232 | MS.gene041037:intron | 30.0% | |
| TAGATAAAATACCTTGGAGA+AGG | - | chr1.2:19480940-19480959 | None:intergenic | 30.0% | |
| TATTGACATGTTACGATTTC+AGG | - | chr1.2:19484674-19484693 | None:intergenic | 30.0% | |
| TCAGAGATTCTAATTTGACA+AGG | - | chr1.2:19484414-19484433 | None:intergenic | 30.0% | |
| TCCATTATGTAATTTCCCTA+TGG | + | chr1.2:19484553-19484572 | MS.gene041037:intron | 30.0% | |
| TCTAAACAAACTTACACTTC+AGG | - | chr1.2:19481749-19481768 | None:intergenic | 30.0% | |
| TGATTAGACAATTTCATCTC+TGG | + | chr1.2:19484850-19484869 | MS.gene041037:intron | 30.0% | |
| TGTTAAGTTCAGTCATTAGA+GGG | - | chr1.2:19484940-19484959 | None:intergenic | 30.0% | |
| TTAAATGTAATGACAAGGGA+CGG | + | chr1.2:19481215-19481234 | MS.gene041037:intron | 30.0% | |
| TTAGTATGAAGATGCCAAAT+GGG | - | chr1.2:19484073-19484092 | None:intergenic | 30.0% | |
| TTATTTGTCATCTTCATCGA+AGG | - | chr1.2:19485922-19485941 | None:intergenic | 30.0% | |
| TTCTTACATGTTAATCTCTC+TGG | + | chr1.2:19485215-19485234 | MS.gene041037:intron | 30.0% | |
| TTGACAAGGAAAAACAACTT+GGG | - | chr1.2:19484400-19484419 | None:intergenic | 30.0% | |
| TTGTTAAGTTCAGTCATTAG+AGG | - | chr1.2:19484941-19484960 | None:intergenic | 30.0% | |
| TTTGACAAGGAAAAACAACT+TGG | - | chr1.2:19484401-19484420 | None:intergenic | 30.0% | |
| ! | AAGCATTTGTAAGACTGTTT+TGG | - | chr1.2:19482288-19482307 | None:intergenic | 30.0% |
| ! | ACTATCAATGCTAACCATTT+TGG | + | chr1.2:19483093-19483112 | MS.gene041037:intron | 30.0% |
| ! | AGGTCAATATGTTTAAGATC+TGG | - | chr1.2:19484024-19484043 | None:intergenic | 30.0% |
| ! | ATCATACCCTAAACTTTTTG+CGG | + | chr1.2:19482556-19482575 | MS.gene041037:intron | 30.0% |
| ! | CAAAAAGTTTAGGGTATGAT+TGG | - | chr1.2:19482556-19482575 | None:intergenic | 30.0% |
| ! | CATGACCTAAGTCTATATTT+TGG | + | chr1.2:19482344-19482363 | MS.gene041037:intron | 30.0% |
| ! | CTATCAATGCTAACCATTTT+GGG | + | chr1.2:19483094-19483113 | MS.gene041037:intron | 30.0% |
| ! | GATTGGATGTAAAATTTTGG+AGG | - | chr1.2:19482539-19482558 | None:intergenic | 30.0% |
| ! | TAAGAAATGCATGCTTTAGA+AGG | - | chr1.2:19485201-19485220 | None:intergenic | 30.0% |
| ! | TATTTGATGATTTGAGAAGC+CGG | + | chr1.2:19483147-19483166 | MS.gene041037:CDS | 30.0% |
| ! | TCTCATACATTTTCTTCCAT+TGG | - | chr1.2:19485848-19485867 | None:intergenic | 30.0% |
| ! | TTGCATATTTTTCCAATGGA+GGG | - | chr1.2:19485353-19485372 | None:intergenic | 30.0% |
| ! | TTTGCATATTTTTCCAATGG+AGG | - | chr1.2:19485354-19485373 | None:intergenic | 30.0% |
| !! | ACTTTCTCATTTTAACAGCA+AGG | + | chr1.2:19484092-19484111 | MS.gene041037:intron | 30.0% |
| !! | ATGAAAGTGTTTCCAAATAG+CGG | + | chr1.2:19482927-19482946 | MS.gene041037:intron | 30.0% |
| !! | CTTGATGCTTGGATTTTAAT+GGG | + | chr1.2:19481692-19481711 | MS.gene041037:intron | 30.0% |
| !! | GTGGGAATTTGTTAATTTCT+GGG | + | chr1.2:19484142-19484161 | MS.gene041037:CDS | 30.0% |
| !! | TGTCAATGTCACTGTTTTAA+AGG | - | chr1.2:19481054-19481073 | None:intergenic | 30.0% |
| !!! | TGTTAGTTAGTTTTGTTCTG+CGG | + | chr1.2:19481313-19481332 | MS.gene041037:intron | 30.0% |
| AAATCATACAAACAACAGCC+AGG | - | chr1.2:19483726-19483745 | None:intergenic | 35.0% | |
| AAATCATGAATCCTAGCCAT+AGG | - | chr1.2:19484572-19484591 | None:intergenic | 35.0% | |
| AAGAAAACAGAAGCAGAAGA+AGG | - | chr1.2:19480912-19480931 | None:intergenic | 35.0% | |
| AAGCTCTTAACTTCAACTTG+CGG | - | chr1.2:19481562-19481581 | None:intergenic | 35.0% | |
| AATCATGAATCCTAGCCATA+GGG | - | chr1.2:19484571-19484590 | None:intergenic | 35.0% | |
| AATTATGGGATGCATATCAC+TGG | + | chr1.2:19483958-19483977 | MS.gene041037:CDS | 35.0% | |
| ACTACTCCAAATGAAGGAAT+AGG | - | chr1.2:19482198-19482217 | None:intergenic | 35.0% | |
| ACTGATGTTGTGATTGGTAA+TGG | + | chr1.2:19483221-19483240 | MS.gene041037:CDS | 35.0% | |
| ACTTGCTTAGCATATAGCAA+AGG | + | chr1.2:19484120-19484139 | MS.gene041037:CDS | 35.0% | |
| AGAAAACAGAAGCAGAAGAA+GGG | - | chr1.2:19480911-19480930 | None:intergenic | 35.0% | |
| AGACTGATAACTATAGGTCA+CGG | - | chr1.2:19485501-19485520 | None:intergenic | 35.0% | |
| AGCAAAAGCAATACTAAACC+AGG | - | chr1.2:19484274-19484293 | None:intergenic | 35.0% | |
| AGTCATCATCAGAAAATACC+AGG | - | chr1.2:19482728-19482747 | None:intergenic | 35.0% | |
| ATCACCACTGCTGATAATTA+TGG | + | chr1.2:19483943-19483962 | MS.gene041037:CDS | 35.0% | |
| ATTCATATGTATGTCAGTGC+TGG | + | chr1.2:19485683-19485702 | MS.gene041037:intron | 35.0% | |
| CAACTTATCATGTGCTATGT+TGG | - | chr1.2:19484481-19484500 | None:intergenic | 35.0% | |
| CATCAAGGAACATATCTAGT+TGG | + | chr1.2:19481616-19481635 | MS.gene041037:CDS | 35.0% | |
| CCTAATACCGCAAAAAGTTT+AGG | - | chr1.2:19482566-19482585 | None:intergenic | 35.0% | |
| CGCATGTTTAAACATGCTAA+AGG | + | chr1.2:19484216-19484235 | MS.gene041037:CDS | 35.0% | |
| CTACTCCAAATGAAGGAATA+GGG | - | chr1.2:19482197-19482216 | None:intergenic | 35.0% | |
| CTTGCACGAATTTGGTATAA+AGG | + | chr1.2:19485869-19485888 | MS.gene041037:CDS | 35.0% | |
| GATTAGATGATAAGTGAGGA+GGG | + | chr1.2:19481498-19481517 | MS.gene041037:intron | 35.0% | |
| GCCATAGGGAAATTACATAA+TGG | - | chr1.2:19484557-19484576 | None:intergenic | 35.0% | |
| GTCACCATATGTATCAATGT+CGG | - | chr1.2:19485608-19485627 | None:intergenic | 35.0% | |
| GTGACAGTATCACACATTTA+AGG | + | chr1.2:19481424-19481443 | MS.gene041037:intron | 35.0% | |
| GTTAGTATGAAGATGCCAAA+TGG | - | chr1.2:19484074-19484093 | None:intergenic | 35.0% | |
| GTTTAAACATGCTAAAGGTG+TGG | + | chr1.2:19484221-19484240 | MS.gene041037:intron | 35.0% | |
| TAATCACATTAAGGAGCTTC+AGG | + | chr1.2:19485464-19485483 | MS.gene041037:CDS | 35.0% | |
| TAATTCACACATCTTGCTTC+TGG | + | chr1.2:19483747-19483766 | MS.gene041037:intron | 35.0% | |
| TAGAAGATGTACGATTGCTT+GGG | - | chr1.2:19485290-19485309 | None:intergenic | 35.0% | |
| TATGAGAACTTGCACGAATT+TGG | + | chr1.2:19485861-19485880 | MS.gene041037:CDS | 35.0% | |
| TATGTAATTTCCCTATGGCT+AGG | + | chr1.2:19484558-19484577 | MS.gene041037:intron | 35.0% | |
| TCACAGATCGCGAAAAATAT+TGG | - | chr1.2:19482997-19483016 | None:intergenic | 35.0% | |
| TCACCACTGCTGATAATTAT+GGG | + | chr1.2:19483944-19483963 | MS.gene041037:CDS | 35.0% | |
| TCGTGGATCATGTAAAATAG+TGG | + | chr1.2:19483540-19483559 | MS.gene041037:intron | 35.0% | |
| TGAGAAATAGTCCATTCACT+CGG | - | chr1.2:19484597-19484616 | None:intergenic | 35.0% | |
| TGATTAGATGATAAGTGAGG+AGG | + | chr1.2:19481497-19481516 | MS.gene041037:intron | 35.0% | |
| TGCGACTATTTGACAACATT+TGG | + | chr1.2:19483598-19483617 | MS.gene041037:intron | 35.0% | |
| TGTCACTGCATTCACATAAT+AGG | + | chr1.2:19482044-19482063 | MS.gene041037:intron | 35.0% | |
| TTAAAGACTGCTATCAACCT+AGG | + | chr1.2:19485390-19485409 | MS.gene041037:CDS | 35.0% | |
| TTAGAAGATGTACGATTGCT+TGG | - | chr1.2:19485291-19485310 | None:intergenic | 35.0% | |
| TTGTCAACTAGTGGCTATAA+TGG | + | chr1.2:19482838-19482857 | MS.gene041037:intron | 35.0% | |
| ! | ATTTGATGATTTGAGAAGCC+GGG | + | chr1.2:19483148-19483167 | MS.gene041037:CDS | 35.0% |
| ! | CCTAAACTTTTTGCGGTATT+AGG | + | chr1.2:19482563-19482582 | MS.gene041037:intron | 35.0% |
| ! | CGTAAAGATTCTTTTCTTCC+CGG | - | chr1.2:19483169-19483188 | None:intergenic | 35.0% |
| ! | GAAATTACATAATGGAGCAC+AGG | - | chr1.2:19484549-19484568 | None:intergenic | 35.0% |
| ! | GCTTGATGCTTGGATTTTAA+TGG | + | chr1.2:19481691-19481710 | MS.gene041037:intron | 35.0% |
| ! | TATTTTTCCATCACTACTCC+CGG | - | chr1.2:19483896-19483915 | None:intergenic | 35.0% |
| ! | TATTTTTCGCGATCTGTGAT+TGG | + | chr1.2:19482998-19483017 | MS.gene041037:intron | 35.0% |
| ! | TCATCTATTTCTCAGCAACA+AGG | + | chr1.2:19485750-19485769 | MS.gene041037:intron | 35.0% |
| ! | TGTTTAAGATCTGGAAAACG+AGG | - | chr1.2:19484015-19484034 | None:intergenic | 35.0% |
| ! | TTTGTTAATTTCTGGGTCTG+AGG | + | chr1.2:19484149-19484168 | MS.gene041037:CDS | 35.0% |
| !! | ATGTTGTGATTGGTAATGGA+GGG | + | chr1.2:19483225-19483244 | MS.gene041037:CDS | 35.0% |
| !! | GATGTAAAATTTTGGAGGGT+AGG | - | chr1.2:19482534-19482553 | None:intergenic | 35.0% |
| !! | GGTGGGAATTTGTTAATTTC+TGG | + | chr1.2:19484141-19484160 | MS.gene041037:CDS | 35.0% |
| !! | TAAAATTTTGGAGGGTAGGA+GGG | - | chr1.2:19482530-19482549 | None:intergenic | 35.0% |
| !! | TAGTATTGCTTTTGCTTGAC+AGG | + | chr1.2:19484278-19484297 | MS.gene041037:intron | 35.0% |
| !!! | AGTTTTAAACGGGACAGTTT+TGG | + | chr1.2:19481774-19481793 | MS.gene041037:intron | 35.0% |
| !!! | CTATATTTTGGTGTGTGTGT+GGG | + | chr1.2:19482356-19482375 | MS.gene041037:intron | 35.0% |
| !!! | TCTATATTTTGGTGTGTGTG+TGG | + | chr1.2:19482355-19482374 | MS.gene041037:intron | 35.0% |
| AAAGCCAACCATTGCGATAA+CGG | - | chr1.2:19481986-19482005 | None:intergenic | 40.0% | |
| AACTAAAGCACGAGTACCAA+AGG | + | chr1.2:19485805-19485824 | MS.gene041037:CDS | 40.0% | |
| AATGGCGTGTTACAATTCCA+TGG | + | chr1.2:19484974-19484993 | MS.gene041037:intron | 40.0% | |
| ACAACTTGGGCATTAGGAAA+AGG | - | chr1.2:19484387-19484406 | None:intergenic | 40.0% | |
| AGAAAATACCAGGCAAGTGA+CGG | - | chr1.2:19482718-19482737 | None:intergenic | 40.0% | |
| AGAAATGGCATGCTCATTTG+AGG | + | chr1.2:19482691-19482710 | MS.gene041037:CDS | 40.0% | |
| AGGATGGAATAGTTCGTGTT+TGG | + | chr1.2:19484169-19484188 | MS.gene041037:CDS | 40.0% | |
| ATAAAGGAGCTATTGGATGG+TGG | + | chr1.2:19485885-19485904 | MS.gene041037:CDS | 40.0% | |
| ATATCACTGCCACATCTCTA+GGG | + | chr1.2:19484777-19484796 | MS.gene041037:intron | 40.0% | |
| CAAGGAACATATCTAGTTGG+CGG | + | chr1.2:19481619-19481638 | MS.gene041037:CDS | 40.0% | |
| CAGAGTAGTGTATCCCAAAA+TGG | - | chr1.2:19483110-19483129 | None:intergenic | 40.0% | |
| CATCCCATAATTATCAGCAG+TGG | - | chr1.2:19483950-19483969 | None:intergenic | 40.0% | |
| CATGAAATATGGCATACTCC+TGG | + | chr1.2:19484253-19484272 | MS.gene041037:intron | 40.0% | |
| CATTTAACGACACTACTGCA+GGG | + | chr1.2:19483700-19483719 | MS.gene041037:intron | 40.0% | |
| CGAATTAGCGATTTCATCCA+TGG | - | chr1.2:19484994-19485013 | None:intergenic | 40.0% | |
| CGTCAAGTGATGTAATGACT+TGG | - | chr1.2:19484812-19484831 | None:intergenic | 40.0% | |
| CTATAACATTGGTGCATAGC+TGG | - | chr1.2:19483578-19483597 | None:intergenic | 40.0% | |
| CTCCCACAAGTATATATCAC+CGG | - | chr1.2:19481653-19481672 | None:intergenic | 40.0% | |
| CTGGCAGATTGCTTAAGAAA+TGG | + | chr1.2:19482676-19482695 | MS.gene041037:CDS | 40.0% | |
| GAAATGGCATGCTCATTTGA+GGG | + | chr1.2:19482692-19482711 | MS.gene041037:CDS | 40.0% | |
| GACTTAGGTCATGTTTGGAT+TGG | - | chr1.2:19482337-19482356 | None:intergenic | 40.0% | |
| GAGAAATAGTCCATTCACTC+GGG | - | chr1.2:19484596-19484615 | None:intergenic | 40.0% | |
| GAGGAGAAAAAGATAACCTG+TGG | - | chr1.2:19483996-19484015 | None:intergenic | 40.0% | |
| GAGTCCGACATTGATACATA+TGG | + | chr1.2:19485601-19485620 | MS.gene041037:intron | 40.0% | |
| GCATAAAACACATGTTCAGC+TGG | - | chr1.2:19483874-19483893 | None:intergenic | 40.0% | |
| GCTTAGCATATAGCAAAGGT+GGG | + | chr1.2:19484124-19484143 | MS.gene041037:CDS | 40.0% | |
| GGAAAAACAACTTGGGCATT+AGG | - | chr1.2:19484393-19484412 | None:intergenic | 40.0% | |
| GGTATAAAGGAGCTATTGGA+TGG | + | chr1.2:19485882-19485901 | MS.gene041037:CDS | 40.0% | |
| GTCCGGTGATATATACTTGT+GGG | + | chr1.2:19481648-19481667 | MS.gene041037:CDS | 40.0% | |
| GTGAAAACTTCAGTATGCCA+GGG | - | chr1.2:19483435-19483454 | None:intergenic | 40.0% | |
| TAGTTTCAGCATCAGACGAT+CGG | + | chr1.2:19483261-19483280 | MS.gene041037:CDS | 40.0% | |
| TATAGATGGAAGTAGCAAGC+AGG | - | chr1.2:19483371-19483390 | None:intergenic | 40.0% | |
| TATATCACTGCCACATCTCT+AGG | + | chr1.2:19484776-19484795 | MS.gene041037:intron | 40.0% | |
| TATCAACCTAGGTGATAGCA+GGG | + | chr1.2:19485401-19485420 | MS.gene041037:CDS | 40.0% | |
| TCAGAGTCATCTACTTGTGT+CGG | - | chr1.2:19481082-19481101 | None:intergenic | 40.0% | |
| TCATGTTCTTCACCTTTCCA+TGG | + | chr1.2:19480837-19480856 | MS.gene041037:CDS | 40.0% | |
| TCATTTAACGACACTACTGC+AGG | + | chr1.2:19483699-19483718 | MS.gene041037:intron | 40.0% | |
| TGAAGATGTGACACTTGACA+TGG | + | chr1.2:19484749-19484768 | MS.gene041037:intron | 40.0% | |
| TGATCAGTGTTGTCAACTAG+TGG | + | chr1.2:19482829-19482848 | MS.gene041037:intron | 40.0% | |
| TGCTTAGCATATAGCAAAGG+TGG | + | chr1.2:19484123-19484142 | MS.gene041037:CDS | 40.0% | |
| TGTCCGGTGATATATACTTG+TGG | + | chr1.2:19481647-19481666 | MS.gene041037:CDS | 40.0% | |
| TGTGAAAACTTCAGTATGCC+AGG | - | chr1.2:19483436-19483455 | None:intergenic | 40.0% | |
| TTAATCTCTCTGGATGTTGC+AGG | + | chr1.2:19485225-19485244 | MS.gene041037:intron | 40.0% | |
| TTACTGTTGAGTCATCACAG+AGG | + | chr1.2:19482144-19482163 | MS.gene041037:intron | 40.0% | |
| TTTCCAAATAGCGGCTATAG+TGG | + | chr1.2:19482936-19482955 | MS.gene041037:intron | 40.0% | |
| ! | CTGAACATGTGTTTTATGCC+GGG | + | chr1.2:19483875-19483894 | MS.gene041037:CDS | 40.0% |
| ! | CTGGTTCATTTTCTAACCAC+AGG | + | chr1.2:19483977-19483996 | MS.gene041037:CDS | 40.0% |
| ! | CTTCTGCTTCTGTTTTCTTC+TGG | + | chr1.2:19480913-19480932 | MS.gene041037:CDS | 40.0% |
| ! | GCTGAACATGTGTTTTATGC+CGG | + | chr1.2:19483874-19483893 | MS.gene041037:CDS | 40.0% |
| ! | TCATGATTTTCCCGAGTGAA+TGG | + | chr1.2:19484583-19484602 | MS.gene041037:intron | 40.0% |
| ! | TCCTTGATGATTAGCAGCAA+GGG | - | chr1.2:19481605-19481624 | None:intergenic | 40.0% |
| ! | TGCAGTAGTGTCGTTAAATG+AGG | - | chr1.2:19483700-19483719 | None:intergenic | 40.0% |
| ! | TGTAGCTGACCCAATTTTGT+CGG | + | chr1.2:19483498-19483517 | MS.gene041037:intron | 40.0% |
| ! | TTAATTTCTGGGTCTGAGGA+TGG | + | chr1.2:19484153-19484172 | MS.gene041037:CDS | 40.0% |
| ! | TTCCTTGATGATTAGCAGCA+AGG | - | chr1.2:19481606-19481625 | None:intergenic | 40.0% |
| !! | AAAAAGTGCCGTTATCGCAA+TGG | + | chr1.2:19481975-19481994 | MS.gene041037:intron | 40.0% |
| !! | AAAATTTTGGAGGGTAGGAG+GGG | - | chr1.2:19482529-19482548 | None:intergenic | 40.0% |
| !! | CTGATATCTGGTTCTGAAGA+TGG | + | chr1.2:19482753-19482772 | MS.gene041037:CDS | 40.0% |
| !! | GAATGTTGGTGCTACATAGA+TGG | - | chr1.2:19485550-19485569 | None:intergenic | 40.0% |
| !! | GATGTTGTGATTGGTAATGG+AGG | + | chr1.2:19483224-19483243 | MS.gene041037:CDS | 40.0% |
| !! | GTAAAATTTTGGAGGGTAGG+AGG | - | chr1.2:19482531-19482550 | None:intergenic | 40.0% |
| !! | GTCTTATTTACTCCCTCCAT+TGG | + | chr1.2:19485338-19485357 | MS.gene041037:CDS | 40.0% |
| !! | TTTAAACGGGACAGTTTTGG+AGG | + | chr1.2:19481777-19481796 | MS.gene041037:intron | 40.0% |
| !!! | TAAGAGTTTGGTCGCTTTTC+AGG | + | chr1.2:19482781-19482800 | MS.gene041037:CDS | 40.0% |
| AAACTTCAGTATGCCAGGGT+TGG | - | chr1.2:19483431-19483450 | None:intergenic | 45.0% | |
| ACAATGATGTGGAGTCCATG+TGG | + | chr1.2:19484880-19484899 | MS.gene041037:intron | 45.0% | |
| ATCAACCTAGGTGATAGCAG+GGG | + | chr1.2:19485402-19485421 | MS.gene041037:CDS | 45.0% | |
| CAATGGAGATGGCTAACCAA+TGG | + | chr1.2:19485829-19485848 | MS.gene041037:CDS | 45.0% | |
| CGCGTAACTGATGTTGTGAT+TGG | + | chr1.2:19483215-19483234 | MS.gene041037:CDS | 45.0% | |
| CGGTGATATATACTTGTGGG+AGG | + | chr1.2:19481651-19481670 | MS.gene041037:CDS | 45.0% | |
| CTATCAACCTAGGTGATAGC+AGG | + | chr1.2:19485400-19485419 | MS.gene041037:CDS | 45.0% | |
| CTCCATCTCGATTTCAGAAG+CGG | - | chr1.2:19485784-19485803 | None:intergenic | 45.0% | |
| CTGGAGACATGACAATGATG+TGG | + | chr1.2:19484869-19484888 | MS.gene041037:intron | 45.0% | |
| GATGACTCACTGCTGATATC+TGG | + | chr1.2:19482741-19482760 | MS.gene041037:CDS | 45.0% | |
| GGACACGTTAAACGAAGATG+CGG | - | chr1.2:19484910-19484929 | None:intergenic | 45.0% | |
| GTACCAAAGGACAATGGAGA+TGG | + | chr1.2:19485818-19485837 | MS.gene041037:CDS | 45.0% | |
| TAGCATCCCCTAAGTGATAG+CGG | + | chr1.2:19482020-19482039 | MS.gene041037:intron | 45.0% | |
| TAGCCATCTCCATTGTCCTT+TGG | - | chr1.2:19485824-19485843 | None:intergenic | 45.0% | |
| TAGGTATGGAGCTTAGCGAA+AGG | + | chr1.2:19483793-19483812 | MS.gene041037:intron | 45.0% | |
| TCACATTCACGCTTGATGCT+TGG | + | chr1.2:19481681-19481700 | MS.gene041037:intron | 45.0% | |
| TCATGTGTCAGTGTCGTATC+CGG | + | chr1.2:19485659-19485678 | MS.gene041037:intron | 45.0% | |
| TGACGATGGGATAGGTTGTT+GGG | + | chr1.2:19480779-19480798 | MS.gene041037:CDS | 45.0% | |
| TGGACTTGCCCGACAAAATT+GGG | - | chr1.2:19483510-19483529 | None:intergenic | 45.0% | |
| TGGTTACTTGTAACCAACCC+TGG | + | chr1.2:19483415-19483434 | MS.gene041037:intron | 45.0% | |
| TTAGTGACGCTGTAGCATAG+AGG | - | chr1.2:19483667-19483686 | None:intergenic | 45.0% | |
| TTCAGCTGGATCCAAGACAA+TGG | - | chr1.2:19483860-19483879 | None:intergenic | 45.0% | |
| TTGACGATGGGATAGGTTGT+TGG | + | chr1.2:19480778-19480797 | MS.gene041037:CDS | 45.0% | |
| TTTCTTCTGGTCCTTCTCCA+AGG | + | chr1.2:19480926-19480945 | MS.gene041037:CDS | 45.0% | |
| ! | CCTTGATGATTAGCAGCAAG+GGG | - | chr1.2:19481604-19481623 | None:intergenic | 45.0% |
| ! | GTAGCTGACCCAATTTTGTC+GGG | + | chr1.2:19483499-19483518 | MS.gene041037:intron | 45.0% |
| ! | TTTTATGCCGGGAGTAGTGA+TGG | + | chr1.2:19483886-19483905 | MS.gene041037:CDS | 45.0% |
| !! | GCATGCTTTAGAAGGTGACT+CGG | - | chr1.2:19485193-19485212 | None:intergenic | 45.0% |
| !!! | CTTTTTTATTTTTAATTTAA+AGG | + | chr1.2:19485519-19485538 | MS.gene041037:intron | 5.0% |
| AAGTCCAGTGCTGTCAATCG+TGG | + | chr1.2:19483523-19483542 | MS.gene041037:intron | 50.0% | |
| ACCTATCCCATCGTCAACAG+AGG | - | chr1.2:19480775-19480794 | None:intergenic | 50.0% | |
| AGAGAGACAAGGCCATGGAA+AGG | - | chr1.2:19480852-19480871 | None:intergenic | 50.0% | |
| AGGGGCTTAATAGCTTCAGC+AGG | - | chr1.2:19481586-19481605 | None:intergenic | 50.0% | |
| AGTGACAGCCGCTATCACTT+AGG | - | chr1.2:19482031-19482050 | None:intergenic | 50.0% | |
| ATCAGACGATCGGACGTGTA+AGG | + | chr1.2:19483271-19483290 | MS.gene041037:CDS | 50.0% | |
| CACAACATCAGTTACGCGCA+TGG | - | chr1.2:19483213-19483232 | None:intergenic | 50.0% | |
| CACTTCCATCCCTAGAGATG+TGG | - | chr1.2:19484789-19484808 | None:intergenic | 50.0% | |
| CATCTCGATTTCAGAAGCGG+CGG | - | chr1.2:19485781-19485800 | None:intergenic | 50.0% | |
| CCCCTTGCTGCTAATCATCA+AGG | + | chr1.2:19481601-19481620 | MS.gene041037:CDS | 50.0% | |
| CCTCTTCCTCTGTTGACGAT+GGG | + | chr1.2:19480766-19480785 | MS.gene041037:CDS | 50.0% | |
| CTGGACTTGCCCGACAAAAT+TGG | - | chr1.2:19483511-19483530 | None:intergenic | 50.0% | |
| GCACCACTATAGCCGCTATT+TGG | - | chr1.2:19482942-19482961 | None:intergenic | 50.0% | |
| GCACGAGTACCAAAGGACAA+TGG | + | chr1.2:19485812-19485831 | MS.gene041037:CDS | 50.0% | |
| GGGAGATGTGTTTGCAACAG+TGG | + | chr1.2:19482233-19482252 | MS.gene041037:intron | 50.0% | |
| GGTTGTTGGGACCTTCATAC+AGG | + | chr1.2:19480792-19480811 | MS.gene041037:CDS | 50.0% | |
| GTGACAGCCGCTATCACTTA+GGG | - | chr1.2:19482030-19482049 | None:intergenic | 50.0% | |
| GTTGCTCAGCACCTGTATGA+AGG | - | chr1.2:19480806-19480825 | None:intergenic | 50.0% | |
| TCCTCTGTTGACGATGGGAT+AGG | + | chr1.2:19480771-19480790 | MS.gene041037:CDS | 50.0% | |
| TGACAGCCGCTATCACTTAG+GGG | - | chr1.2:19482029-19482048 | None:intergenic | 50.0% | |
| TGATCCACGATTGACAGCAC+TGG | - | chr1.2:19483530-19483549 | None:intergenic | 50.0% | |
| ! | AGTGCCGTTATCGCAATGGT+TGG | + | chr1.2:19481979-19481998 | MS.gene041037:intron | 50.0% |
| ! | CAGTCATTAGAGGGCATGAC+AGG | - | chr1.2:19484931-19484950 | None:intergenic | 50.0% |
| !! | TTCCATGGCCTTGTCTCTCT+CGG | + | chr1.2:19480852-19480871 | MS.gene041037:CDS | 50.0% |
| AACCGAGAGAGACAAGGCCA+TGG | - | chr1.2:19480857-19480876 | None:intergenic | 55.0% | |
| AGCGAGAACCGAGAGAGACA+AGG | - | chr1.2:19480863-19480882 | None:intergenic | 55.0% | |
| AGGTGATAGCAGGGGATGCA+TGG | + | chr1.2:19485410-19485429 | MS.gene041037:CDS | 55.0% | |
| CCCATCGTCAACAGAGGAAG+AGG | - | chr1.2:19480769-19480788 | None:intergenic | 55.0% | |
| CGAAGATGCGGAAGTCCACA+TGG | - | chr1.2:19484898-19484917 | None:intergenic | 55.0% | |
| GCCTCTTCCTCTGTTGACGA+TGG | + | chr1.2:19480765-19480784 | MS.gene041037:CDS | 55.0% | |
| TGCATCCCCTGCTATCACCT+AGG | - | chr1.2:19485410-19485429 | None:intergenic | 55.0% | |
| ! | CACTGCCACATCTCTAGGGA+TGG | + | chr1.2:19484781-19484800 | MS.gene041037:intron | 55.0% |
| ! | CTAGTTGGCGGAGCTTTGTC+CGG | + | chr1.2:19481631-19481650 | MS.gene041037:CDS | 55.0% |
| !! | CGCCGCTTCTGAAATCGAGA+TGG | + | chr1.2:19485779-19485798 | MS.gene041037:CDS | 55.0% |
| !! | GACAAGGGACGGTGTCATGT+TGG | + | chr1.2:19481226-19481245 | MS.gene041037:intron | 55.0% |
| AACGACACTACTGCAGGGCC+TGG | + | chr1.2:19483705-19483724 | MS.gene041037:intron | 60.0% | |
| CTTAGGGGATGCTACGCTGC+TGG | - | chr1.2:19482014-19482033 | None:intergenic | 60.0% | |
| GCGCGCACACACAGAAAGGA+TGG | - | chr1.2:19484508-19484527 | None:intergenic | 60.0% | |
| TTGCGCGCGCACACACAGAA+AGG | - | chr1.2:19484512-19484531 | None:intergenic | 60.0% | |
| TTTCTGTGTGTGCGCGCGCA+AGG | + | chr1.2:19484511-19484530 | MS.gene041037:intron | 60.0% | |
| TTTGAGGGCCGTCACTTGCC+TGG | + | chr1.2:19482707-19482726 | MS.gene041037:CDS | 60.0% | |
| AGGGGATGCTACGCTGCTGG+TGG | - | chr1.2:19482011-19482030 | None:intergenic | 65.0% | |
| GGGATGCTACGCTGCTGGTG+GGG | - | chr1.2:19482009-19482028 | None:intergenic | 65.0% | |
| GGGGATGCTACGCTGCTGGT+GGG | - | chr1.2:19482010-19482029 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 19480750 | 19485941 | 19480750 | ID=MS.gene041037 |
| chr1.2 | mRNA | 19480750 | 19485941 | 19480750 | ID=MS.gene041037.t1;Parent=MS.gene041037 |
| chr1.2 | exon | 19480750 | 19480947 | 19480750 | ID=MS.gene041037.t1.exon1;Parent=MS.gene041037.t1 |
| chr1.2 | CDS | 19480750 | 19480947 | 19480750 | ID=cds.MS.gene041037.t1;Parent=MS.gene041037.t1 |
| chr1.2 | exon | 19481559 | 19481672 | 19481559 | ID=MS.gene041037.t1.exon2;Parent=MS.gene041037.t1 |
| chr1.2 | CDS | 19481559 | 19481672 | 19481559 | ID=cds.MS.gene041037.t1;Parent=MS.gene041037.t1 |
| chr1.2 | exon | 19482669 | 19482802 | 19482669 | ID=MS.gene041037.t1.exon3;Parent=MS.gene041037.t1 |
| chr1.2 | CDS | 19482669 | 19482802 | 19482669 | ID=cds.MS.gene041037.t1;Parent=MS.gene041037.t1 |
| chr1.2 | exon | 19483145 | 19483292 | 19483145 | ID=MS.gene041037.t1.exon4;Parent=MS.gene041037.t1 |
| chr1.2 | CDS | 19483145 | 19483292 | 19483145 | ID=cds.MS.gene041037.t1;Parent=MS.gene041037.t1 |
| chr1.2 | exon | 19483796 | 19483998 | 19483796 | ID=MS.gene041037.t1.exon5;Parent=MS.gene041037.t1 |
| chr1.2 | CDS | 19483796 | 19483998 | 19483796 | ID=cds.MS.gene041037.t1;Parent=MS.gene041037.t1 |
| chr1.2 | exon | 19484110 | 19484237 | 19484110 | ID=MS.gene041037.t1.exon6;Parent=MS.gene041037.t1 |
| chr1.2 | CDS | 19484110 | 19484237 | 19484110 | ID=cds.MS.gene041037.t1;Parent=MS.gene041037.t1 |
| chr1.2 | exon | 19485247 | 19485485 | 19485247 | ID=MS.gene041037.t1.exon7;Parent=MS.gene041037.t1 |
| chr1.2 | CDS | 19485247 | 19485485 | 19485247 | ID=cds.MS.gene041037.t1;Parent=MS.gene041037.t1 |
| chr1.2 | exon | 19485765 | 19485941 | 19485765 | ID=MS.gene041037.t1.exon8;Parent=MS.gene041037.t1 |
| chr1.2 | CDS | 19485765 | 19485941 | 19485765 | ID=cds.MS.gene041037.t1;Parent=MS.gene041037.t1 |
| Gene Sequence |
| Protein sequence |
