AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene042253

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042253.t1 MTR_4g131750 97.922 385 8 0 16 400 96 480 0.0 783
MS.gene042253.t1 MTR_3g083690 31.915 376 198 14 12 362 155 497 1.87e-33 132
MS.gene042253.t1 MTR_2g063080 26.698 427 230 10 20 391 127 525 1.67e-30 123
MS.gene042253.t1 MTR_4g105100 28.969 359 220 9 10 362 210 539 1.49e-29 120
MS.gene042253.t1 MTR_1g054630 30.352 369 212 12 12 362 164 505 1.95e-29 120
MS.gene042253.t1 MTR_2g100230 27.681 401 237 11 10 391 104 470 3.11e-29 119
MS.gene042253.t1 MTR_4g114120 29.973 377 198 15 16 362 154 494 3.71e-28 117
MS.gene042253.t1 MTR_7g056830 28.532 361 225 11 17 374 25 355 2.79e-27 112
MS.gene042253.t1 MTR_2g039960 26.509 381 233 12 20 391 59 401 4.22e-27 112
MS.gene042253.t1 MTR_3g467550 30.833 360 198 15 21 362 105 431 5.14e-27 112
MS.gene042253.t1 MTR_3g467550 30.833 360 198 15 21 362 136 462 5.44e-27 113
MS.gene042253.t1 MTR_6g082080 28.255 361 226 11 17 374 25 355 7.39e-27 111
MS.gene042253.t1 MTR_2g032630 28.841 371 211 9 8 362 499 832 1.61e-26 112
MS.gene042253.t1 MTR_6g039840 26.316 399 238 14 16 392 124 488 7.19e-26 110
MS.gene042253.t1 MTR_5g027840 29.121 364 199 14 20 362 120 445 1.58e-25 108
MS.gene042253.t1 MTR_6g005550 28.401 419 229 14 5 392 161 539 2.26e-25 108
MS.gene042253.t1 MTR_4g079320 27.841 352 211 12 20 362 37 354 4.82e-25 107
MS.gene042253.t1 MTR_4g112340 26.989 352 223 8 18 362 113 437 4.91e-25 107
MS.gene042253.t1 MTR_2g099620 25.326 383 231 13 20 389 59 399 5.06e-25 105
MS.gene042253.t1 MTR_2g099620 25.326 383 231 13 20 389 43 383 6.02e-25 105
MS.gene042253.t1 MTR_4g059460 26.179 424 226 13 7 362 50 454 9.23e-25 106
MS.gene042253.t1 MTR_4g125970 26.571 350 214 10 20 362 59 372 9.69e-25 105
MS.gene042253.t1 MTR_4g125970 26.087 345 222 8 20 362 76 389 1.06e-24 105
MS.gene042253.t1 MTR_7g100820 26.287 369 211 11 10 362 142 465 1.62e-24 105
MS.gene042253.t1 MTR_1g026830 27.228 404 244 14 15 399 160 532 4.17e-24 104
MS.gene042253.t1 MTR_8g018400 26.571 350 214 10 20 362 59 372 8.68e-24 102
MS.gene042253.t1 MTR_1g095810 28.056 360 218 12 15 362 158 488 9.30e-24 103
MS.gene042253.t1 MTR_8g027770 27.838 370 213 14 16 363 215 552 9.74e-24 103
MS.gene042253.t1 MTR_7g076820 24.533 375 247 10 18 391 166 505 2.16e-23 102
MS.gene042253.t1 MTR_2g043360 25.943 424 227 13 7 362 47 451 2.35e-23 102
MS.gene042253.t1 MTR_2g055850 27.988 343 216 11 25 362 114 430 6.56e-23 100
MS.gene042253.t1 MTR_6g005320 26.478 389 221 13 16 375 263 615 1.58e-22 100
MS.gene042253.t1 MTR_4g134170 26.410 390 222 13 16 375 301 655 1.72e-22 100
MS.gene042253.t1 MTR_2g438110 25.000 356 216 11 18 362 50 365 4.47e-22 97.4
MS.gene042253.t1 MTR_3g107420 25.765 392 229 13 20 392 65 413 1.04e-21 96.7
MS.gene042253.t1 MTR_2g041140 28.291 357 212 13 17 362 156 479 1.37e-21 97.4
MS.gene042253.t1 MTR_2g007000 26.343 391 219 13 16 383 518 862 1.89e-21 97.4
MS.gene042253.t1 MTR_4g105100 28.182 330 202 9 10 333 210 510 2.01e-21 96.7
MS.gene042253.t1 MTR_3g467550 29.275 345 195 14 21 348 136 448 2.49e-21 95.9
MS.gene042253.t1 MTR_7g109720 28.346 381 226 15 20 391 250 592 3.18e-21 96.3
MS.gene042253.t1 MTR_3g049990 28.571 357 210 14 17 362 167 489 3.35e-21 96.3
MS.gene042253.t1 MTR_7g076830 23.733 375 250 10 18 391 159 498 4.60e-21 95.5
MS.gene042253.t1 MTR_2g066050 27.887 355 214 12 17 362 68 389 5.53e-21 95.1
MS.gene042253.t1 MTR_7g076800 23.733 375 250 10 18 391 157 496 6.38e-21 95.1
MS.gene042253.t1 MTR_5g092560 25.068 367 237 11 21 379 95 431 8.50e-21 95.1
MS.gene042253.t1 MTR_7g057250 25.527 427 227 14 16 375 177 579 1.09e-20 94.7
MS.gene042253.t1 MTR_8g027775 26.486 370 218 15 16 363 116 453 1.50e-20 94.0
MS.gene042253.t1 MTR_1g012420 25.000 392 232 13 20 392 65 413 2.01e-20 92.8
MS.gene042253.t1 MTR_4g010565 23.274 391 248 9 20 398 142 492 2.65e-20 93.2
MS.gene042253.t1 MTR_3g071620 24.528 371 250 7 5 362 20 373 6.09e-20 92.4
MS.gene042253.t1 MTR_3g449250 27.988 343 211 9 26 362 114 426 6.75e-20 92.0
MS.gene042253.t1 MTR_3g449250 27.624 362 225 9 7 362 96 426 6.98e-20 92.0
MS.gene042253.t1 MTR_5g090120 29.086 361 204 11 16 362 95 417 7.25e-20 92.0
MS.gene042253.t1 MTR_8g097000 25.272 368 217 14 20 363 306 639 1.74e-19 91.3
MS.gene042253.t1 MTR_6g033070 25.634 355 227 9 16 362 154 479 2.98e-19 90.1
MS.gene042253.t1 MTR_8g027780 25.543 368 222 13 16 362 120 456 3.95e-19 89.7
MS.gene042253.t1 MTR_4g068990 25.287 348 227 11 21 362 95 415 1.03e-18 88.6
MS.gene042253.t1 MTR_3g118120 23.958 384 233 11 10 362 140 495 7.31e-18 85.9
MS.gene042253.t1 MTR_6g056080 25.330 379 233 13 26 390 127 469 1.32e-16 82.0
MS.gene042253.t1 MTR_1g083130 22.980 396 235 10 24 374 48 418 2.09e-16 81.6
MS.gene042253.t1 MTR_6g039840 27.362 307 175 13 71 362 12 285 3.75e-16 80.5
MS.gene042253.t1 MTR_8g027780 25.217 345 206 13 16 339 120 433 6.59e-15 76.6
MS.gene042253.t1 MTR_1g061970 26.630 368 216 17 7 355 86 418 1.08e-14 75.9
MS.gene042253.t1 MTR_8g018370 22.985 335 201 11 31 363 2 281 6.69e-14 72.4
MS.gene042253.t1 MTR_1g102410 24.868 378 220 11 16 362 58 402 8.67e-14 73.6
MS.gene042253.t1 MTR_4g459350 27.885 208 129 5 4 202 44 239 2.06e-13 70.5
MS.gene042253.t1 MTR_0915s0010 26.111 180 121 4 18 197 5 172 5.91e-12 66.2
MS.gene042253.t1 MTR_8g062720 26.776 183 117 6 186 362 356 527 1.45e-11 66.6
MS.gene042253.t1 MTR_4g077370 30.270 185 110 5 17 196 265 435 3.65e-11 65.1
MS.gene042253.t1 MTR_3g107420 26.776 183 123 3 20 201 65 237 4.32e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042253.t1 AT5G19210 68.974 390 118 1 10 399 85 471 0.0 585
MS.gene042253.t1 AT5G19210 69.401 317 94 1 83 399 1 314 1.46e-168 474
MS.gene042253.t1 AT5G19210 69.401 317 94 1 83 399 1 314 1.46e-168 474
MS.gene042253.t1 AT1G12770 25.959 443 243 13 16 399 125 541 8.32e-32 127
MS.gene042253.t1 AT1G12770 25.959 443 243 13 16 399 125 541 8.32e-32 127
MS.gene042253.t1 AT3G58510 31.319 364 195 11 21 362 171 501 1.02e-30 124
MS.gene042253.t1 AT3G58510 31.319 364 195 11 21 362 171 501 1.02e-30 124
MS.gene042253.t1 AT3G58510 31.319 364 195 11 21 362 171 501 1.02e-30 124
MS.gene042253.t1 AT3G58570 31.105 389 211 12 12 372 157 516 1.67e-30 124
MS.gene042253.t1 AT2G42520 31.768 362 198 12 21 362 179 511 1.53e-29 120
MS.gene042253.t1 AT2G42520 31.768 362 198 12 21 362 179 511 1.53e-29 120
MS.gene042253.t1 AT2G42520 31.768 362 198 12 21 362 179 511 1.53e-29 120
MS.gene042253.t1 AT5G63120 28.804 368 226 11 1 362 166 503 2.27e-29 120
MS.gene042253.t1 AT5G60990 29.570 372 217 13 17 374 25 365 5.57e-28 115
MS.gene042253.t1 AT1G20920 29.843 382 217 14 16 383 206 550 1.53e-27 115
MS.gene042253.t1 AT1G20920 29.843 382 217 14 16 383 544 888 5.32e-27 114
MS.gene042253.t1 AT1G20920 29.843 382 217 14 16 383 544 888 5.32e-27 114
MS.gene042253.t1 AT1G20920 29.843 382 217 14 16 383 544 888 5.32e-27 114
MS.gene042253.t1 AT1G20920 29.843 382 217 14 16 383 544 888 5.32e-27 114
MS.gene042253.t1 AT1G20920 29.843 382 217 14 16 383 544 888 5.32e-27 114
MS.gene042253.t1 AT1G20920 29.843 382 217 14 16 383 544 888 5.32e-27 114
MS.gene042253.t1 AT3G01540 30.184 381 203 13 5 362 155 495 6.05e-27 113
MS.gene042253.t1 AT1G55150 28.056 360 222 10 10 362 133 462 6.42e-27 112
MS.gene042253.t1 AT3G01540 30.184 381 203 13 5 362 155 495 6.66e-27 113
MS.gene042253.t1 AT3G01540 30.184 381 203 13 5 362 155 495 6.66e-27 113
MS.gene042253.t1 AT3G01540 30.184 381 203 13 5 362 155 495 6.66e-27 113
MS.gene042253.t1 AT1G55150 28.056 360 222 10 10 362 108 437 7.92e-27 112
MS.gene042253.t1 AT1G72730 26.667 390 235 14 20 400 60 407 7.97e-27 111
MS.gene042253.t1 AT5G65900 29.155 367 225 11 2 362 156 493 1.46e-26 112
MS.gene042253.t1 AT1G77030 27.374 358 221 11 12 362 39 364 1.52e-26 112
MS.gene042253.t1 AT3G09720 25.556 360 227 11 9 362 149 473 3.01e-26 110
MS.gene042253.t1 AT3G09720 25.556 360 227 11 9 362 149 473 3.01e-26 110
MS.gene042253.t1 AT3G13920 25.641 390 239 13 20 400 53 400 1.92e-25 107
MS.gene042253.t1 AT3G13920 25.195 385 247 11 20 400 48 395 2.31e-25 107
MS.gene042253.t1 AT3G13920 25.641 390 239 13 20 400 58 405 2.56e-25 107
MS.gene042253.t1 AT1G54270 26.087 391 236 13 20 400 53 400 3.06e-25 106
MS.gene042253.t1 AT1G54270 26.087 391 236 13 20 400 58 405 4.28e-25 106
MS.gene042253.t1 AT4G33370 28.117 377 224 14 5 362 93 441 5.19e-25 107
MS.gene042253.t1 AT5G14610 28.371 356 219 10 13 362 42 367 1.01e-24 106
MS.gene042253.t1 AT5G14610 28.371 356 219 10 13 362 42 367 1.01e-24 106
MS.gene042253.t1 AT4G00660 26.385 379 235 10 18 391 148 487 1.25e-24 105
MS.gene042253.t1 AT4G00660 26.385 379 235 10 18 391 148 487 1.25e-24 105
MS.gene042253.t1 AT3G13920 24.932 369 242 9 20 386 62 397 1.60e-24 104
MS.gene042253.t1 AT3G13920 24.932 369 242 9 20 386 58 393 1.75e-24 104
MS.gene042253.t1 AT3G18600 26.685 356 220 10 16 362 104 427 2.27e-24 105
MS.gene042253.t1 AT5G51280 27.324 355 225 10 16 362 161 490 2.30e-24 105
MS.gene042253.t1 AT2G40700 26.777 422 216 15 13 362 43 443 2.59e-24 105
MS.gene042253.t1 AT5G14610 29.067 375 215 14 5 362 158 498 2.72e-24 105
MS.gene042253.t1 AT4G09730 26.768 396 240 14 16 392 127 491 2.78e-24 105
MS.gene042253.t1 AT5G14610 29.067 375 215 14 5 362 158 498 2.83e-24 105
MS.gene042253.t1 AT3G06480 27.479 353 214 8 19 362 453 772 3.28e-24 105
MS.gene042253.t1 AT5G63630 26.902 368 219 13 16 363 69 406 3.32e-24 104
MS.gene042253.t1 AT5G14610 29.134 381 207 15 5 362 166 506 3.41e-24 105
MS.gene042253.t1 AT1G16280 28.238 386 228 13 17 391 74 421 4.73e-24 103
MS.gene042253.t1 AT5G14610 28.412 359 215 11 13 362 241 566 6.02e-24 104
MS.gene042253.t1 AT3G61240 24.740 384 250 10 18 400 141 486 9.26e-24 103
MS.gene042253.t1 AT3G61240 24.740 384 250 10 18 400 141 486 9.26e-24 103
MS.gene042253.t1 AT5G63630 26.902 368 219 13 16 363 263 600 1.02e-23 103
MS.gene042253.t1 AT3G19760 25.424 354 217 11 18 362 52 367 1.37e-23 102
MS.gene042253.t1 AT1G71370 25.798 376 227 12 5 362 21 362 9.19e-23 100
MS.gene042253.t1 AT5G05450 24.103 390 225 11 5 362 21 371 1.67e-22 100
MS.gene042253.t1 AT2G45810 24.675 385 249 10 18 400 171 516 3.93e-22 98.6
MS.gene042253.t1 AT2G33730 27.110 391 218 12 16 375 328 682 7.17e-22 98.2
MS.gene042253.t1 AT1G51380 26.136 352 217 10 18 362 39 354 9.16e-22 96.7
MS.gene042253.t1 AT5G11170 26.142 394 233 14 20 398 65 415 2.43e-21 95.5
MS.gene042253.t1 AT5G11200 26.142 394 233 14 20 398 65 415 2.43e-21 95.5
MS.gene042253.t1 AT2G47330 27.177 379 231 15 21 391 248 589 1.16e-20 94.7
MS.gene042253.t1 AT5G63120 27.628 333 203 11 10 333 171 474 2.69e-20 92.8
MS.gene042253.t1 AT5G63120 27.628 333 203 11 10 333 171 474 2.69e-20 92.8
MS.gene042253.t1 AT5G63120 27.628 333 203 11 10 333 171 474 2.69e-20 92.8
MS.gene042253.t1 AT5G63120 27.628 333 203 11 10 333 171 474 3.24e-20 92.8
MS.gene042253.t1 AT5G11200 25.476 420 244 16 20 398 65 456 3.59e-20 92.4
MS.gene042253.t1 AT5G08620 26.954 371 215 14 16 363 95 432 3.91e-20 92.8
MS.gene042253.t1 AT3G02065 26.331 357 223 10 16 362 125 451 7.84e-20 91.7
MS.gene042253.t1 AT3G02065 26.331 357 223 10 16 362 125 451 7.84e-20 91.7
MS.gene042253.t1 AT3G09620 28.342 374 188 15 16 375 412 719 9.22e-20 92.0
MS.gene042253.t1 AT3G09620 28.342 374 188 15 16 375 411 718 9.65e-20 92.0
MS.gene042253.t1 AT5G11200 25.000 428 254 14 20 398 65 474 1.32e-19 90.9
MS.gene042253.t1 AT5G54910 26.005 373 222 11 6 362 77 411 1.76e-19 91.3
MS.gene042253.t1 AT4G16630 28.969 359 206 14 17 362 183 505 4.11e-19 90.1
MS.gene042253.t1 AT5G08610 26.630 368 220 13 16 363 397 734 5.98e-19 89.7
MS.gene042253.t1 AT3G16840 24.105 419 226 14 24 375 214 607 1.37e-18 88.6
MS.gene042253.t1 AT3G16840 24.105 419 226 14 24 375 213 606 1.47e-18 88.6
MS.gene042253.t1 AT3G22330 26.554 354 202 10 26 362 129 441 2.45e-18 87.4
MS.gene042253.t1 AT2G07750 24.205 409 238 15 20 400 394 758 6.29e-18 86.7
MS.gene042253.t1 AT5G14610 27.322 366 204 14 13 360 178 499 6.43e-18 85.9
MS.gene042253.t1 AT5G26742 25.556 360 222 10 16 362 117 443 7.60e-18 86.3
MS.gene042253.t1 AT5G26742 25.556 360 222 10 16 362 117 443 7.60e-18 86.3
MS.gene042253.t1 AT3G22310 25.797 345 216 7 26 362 141 453 1.07e-17 85.5
MS.gene042253.t1 AT3G22310 25.797 345 216 7 26 362 141 453 1.10e-17 85.5
MS.gene042253.t1 AT1G63250 24.205 409 238 15 20 400 347 711 1.18e-17 85.5
MS.gene042253.t1 AT3G06480 26.687 326 197 8 19 335 453 745 4.96e-17 83.6
MS.gene042253.t1 AT5G11170 25.337 371 225 12 40 398 2 332 6.92e-17 81.6
MS.gene042253.t1 AT1G71280 23.796 353 193 10 5 341 22 314 8.28e-17 82.4
MS.gene042253.t1 AT1G71280 23.782 349 190 10 5 337 22 310 8.42e-17 81.3
MS.gene042253.t1 AT3G06980 24.932 369 235 12 16 362 389 737 9.95e-17 82.8
MS.gene042253.t1 AT5G62190 27.869 366 208 14 26 372 121 449 2.97e-16 81.3
MS.gene042253.t1 AT5G26742 25.740 338 205 10 38 362 46 350 8.52e-16 79.7
MS.gene042253.t1 AT1G28180 26.031 388 224 12 31 400 3 345 1.78e-15 77.8
MS.gene042253.t1 AT3G02065 25.507 345 213 11 30 362 2 314 2.58e-14 74.3
MS.gene042253.t1 AT4G34910 24.816 407 222 15 9 362 54 429 5.57e-14 73.9
MS.gene042253.t1 AT3G53110 25.995 377 224 16 7 362 98 440 5.50e-13 70.9
MS.gene042253.t1 AT1G51380 25.806 248 162 7 18 262 39 267 2.46e-11 64.3

Find 87 sgRNAs with CRISPR-Local

Find 380 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTATATGTGAGTCATTTC+TGG 0.194191 8.2:+3385984 None:intergenic
GATGAGGCAAAGCTTGTTTC+TGG 0.205005 8.2:+3390667 None:intergenic
TTTCTTATCTAGACAGGTTC+TGG 0.245869 8.2:-3389765 MS.gene042253:intron
AAGGCACAAGAGTTGGTTTA+AGG 0.253619 8.2:-3389415 MS.gene042253:intron
AAAGTTGTCTTTCAAGCATT+TGG 0.274712 8.2:+3388595 None:intergenic
CCACCGGACTAACGTGAATA+TGG 0.305745 8.2:+3387795 None:intergenic
CGGATTGTATCAAGGATAAC+AGG 0.308643 8.2:+3387496 None:intergenic
ACCATCATGGCTTTGTTAGA+TGG 0.349677 8.2:-3389450 MS.gene042253:CDS
TTTCTTCAATTCAGGAGGTT+AGG 0.380425 8.2:-3386064 MS.gene042253:intron
GCAGTCTGAGAAGTCGAAAA+AGG 0.395260 8.2:-3386771 MS.gene042253:intron
ACGAAGCTGTGCAGCAGAAA+TGG 0.398801 8.2:-3387936 MS.gene042253:CDS
ACTGTTGCAACTACTATTGC+TGG 0.408826 8.2:+3388630 None:intergenic
TGCTCCCCTTCAACTCCTGT+TGG 0.415557 8.2:+3389483 None:intergenic
TGCTTGATGAAGATAATCTA+TGG 0.419150 8.2:+3385941 None:intergenic
CAATCCGATGCTCCCAAGTC+TGG 0.430922 8.2:-3387480 MS.gene042253:CDS
AGTACAATTCACATCAGAAA+AGG 0.436765 8.2:+3385899 None:intergenic
TACCAAGGTTGCTAGGATAC+TGG 0.442206 8.2:-3389514 MS.gene042253:CDS
AATATGAGGTCAAAATCTTC+CGG 0.442699 8.2:+3388025 None:intergenic
CATTATATTTGTTAGTGAGC+AGG 0.459913 8.2:-3387457 MS.gene042253:intron
CATTGAGAAGGCACAAGAGT+TGG 0.474974 8.2:-3389422 MS.gene042253:CDS
GGTTTCAGGATGGAAGAAGT+TGG 0.479405 8.2:-3390711 MS.gene042253:intron
TTACTTGCATGCCAAGTTCA+CGG 0.485189 8.2:+3389658 None:intergenic
TTCTTATCTAGACAGGTTCT+GGG 0.487069 8.2:-3389764 MS.gene042253:intron
TTGGTGCCCACCCGTGAACT+TGG 0.487776 8.2:-3389669 MS.gene042253:CDS
TACTTGCATGCCAAGTTCAC+GGG 0.491088 8.2:+3389659 None:intergenic
GCAAAGCCAACAGGAGTTGA+AGG 0.491708 8.2:-3389489 MS.gene042253:CDS
GCTTGGAACCTTGCGGGTGT+TGG 0.493949 8.2:-3388568 MS.gene042253:CDS
AACAAATATAATGCCAGACT+TGG 0.496013 8.2:+3387467 None:intergenic
ATACTGGCTGCAAAGCCAAC+AGG 0.501290 8.2:-3389498 MS.gene042253:CDS
GTACAATTCACATCAGAAAA+GGG 0.505001 8.2:+3385900 None:intergenic
ATAGATTATCTTCATCAAGC+AGG 0.508103 8.2:-3385939 MS.gene042253:CDS
GCTTGTTTCTGGACCGGTGT+AGG 0.508652 8.2:+3390678 None:intergenic
GGCAAAGCTTGTTTCTGGAC+CGG 0.513600 8.2:+3390672 None:intergenic
GATCCATATTCACGTTAGTC+CGG 0.519341 8.2:-3387798 MS.gene042253:CDS
CACCAGCATTATAGTCTCGC+AGG 0.522768 8.2:-3385874 MS.gene042253:CDS
TCATGTCATCTTCGAGGAGG+AGG 0.523824 8.2:+3386678 None:intergenic
ATCAGAAAAGGGTTTCCTAC+AGG 0.525591 8.2:+3385911 None:intergenic
CGAGACGGCATGGGCTCCAC+CGG 0.526533 8.2:+3387779 None:intergenic
ATGAGATAGACGAGACGGCA+TGG 0.531411 8.2:+3387769 None:intergenic
TCCATCTAACAAAGCCATGA+TGG 0.537850 8.2:+3389449 None:intergenic
TGAAATTCATGTCATCTTCG+AGG 0.542019 8.2:+3386672 None:intergenic
CAAAGCAAGTGAGTTCTCTC+CGG 0.545982 8.2:-3388044 MS.gene042253:CDS
AATGCCAGACTTGGGAGCAT+CGG 0.548051 8.2:+3387476 None:intergenic
TTCACGAGCAGCTTCTCTGT+TGG 0.548108 8.2:-3386648 MS.gene042253:intron
TGACTGCATACTTCATGCTC+AGG 0.549288 8.2:-3390631 MS.gene042253:intron
ACAAGGTTACCAAGGTTGCT+AGG 0.555693 8.2:-3389521 MS.gene042253:intron
ATGAAGTATGCAGTCACGAC+CGG 0.557707 8.2:+3390638 None:intergenic
GGGAGCATCGGATTGTATCA+AGG 0.557881 8.2:+3387488 None:intergenic
CTCCTGCGAGACTATAATGC+TGG 0.560387 8.2:+3385872 None:intergenic
AAAGTCAATCACAAGGGACG+TGG 0.566234 8.2:+3386733 None:intergenic
GCGGGTGTTGGTTGTTGATG+AGG 0.566555 8.2:-3388556 MS.gene042253:intron
TGAGATAGACGAGACGGCAT+GGG 0.566865 8.2:+3387770 None:intergenic
ATTCAGGAGGTTAGGAAAGG+TGG 0.567056 8.2:-3386056 MS.gene042253:intron
TCAATTCAGGAGGTTAGGAA+AGG 0.571959 8.2:-3386059 MS.gene042253:intron
GTGCTGTGGTATAGATGCAC+TGG 0.576066 8.2:+3387972 None:intergenic
TTGCATGCCAAGTTCACGGG+TGG 0.578362 8.2:+3389662 None:intergenic
CAAAGCCAACAGGAGTTGAA+GGG 0.578993 8.2:-3389488 MS.gene042253:CDS
TGTGCAGCAGAAATGGACTA+AGG 0.582058 8.2:-3387929 MS.gene042253:intron
AGCCAGTATCCTAGCAACCT+TGG 0.595049 8.2:+3389512 None:intergenic
CATAATTGTCTGAGAGTGGT+GGG 0.595645 8.2:+3390850 None:intergenic
GCAAAGATCATGTACCATCA+TGG 0.597463 8.2:-3389463 MS.gene042253:CDS
ACAAATATAATGCCAGACTT+GGG 0.600019 8.2:+3387468 None:intergenic
GCATTATAGTCTCGCAGGAG+CGG 0.601083 8.2:-3385869 MS.gene042253:CDS
ATCATGGCTTTGTTAGATGG+AGG 0.601394 8.2:-3389447 MS.gene042253:CDS
TCAATCACAAGGGACGTGGA+TGG 0.602588 8.2:+3386737 None:intergenic
CCATATTCACGTTAGTCCGG+TGG 0.603339 8.2:-3387795 MS.gene042253:CDS
ATTTAATGACAAGGTTACCA+AGG 0.606643 8.2:-3389529 MS.gene042253:intron
TAGATTATCTTCATCAAGCA+GGG 0.613532 8.2:-3385938 MS.gene042253:CDS
GTTATTACAAGACGAATATG+AGG 0.618006 8.2:+3388011 None:intergenic
CAGGAGGTTAGGAAAGGTGG+CGG 0.618785 8.2:-3386053 MS.gene042253:CDS
TGGATATGTCATGCCTACAC+CGG 0.628469 8.2:-3390691 MS.gene042253:CDS
GCAACAGATGTAGCAGCTAG+AGG 0.629003 8.2:-3386017 MS.gene042253:CDS
ATCAAGCAGGGAGGACCTGT+AGG 0.629511 8.2:-3385926 MS.gene042253:CDS
AGAGATATGAAAATGAGTTG+AGG 0.645209 8.2:-3385836 MS.gene042253:CDS
TTAAGAAATCGATTGTGCTG+TGG 0.645279 8.2:+3387958 None:intergenic
TAGATGGAGGAACATTGAGA+AGG 0.646333 8.2:-3389434 MS.gene042253:CDS
ATCAACAACCAACACCCGCA+AGG 0.646378 8.2:+3388560 None:intergenic
TGCATGCCAAGTTCACGGGT+GGG 0.647137 8.2:+3389663 None:intergenic
AATCTATGAGATAGACGAGA+CGG 0.648321 8.2:+3387764 None:intergenic
AAAGCCAACAGGAGTTGAAG+GGG 0.649551 8.2:-3389487 MS.gene042253:CDS
ACATAATTGTCTGAGAGTGG+TGG 0.655527 8.2:+3390849 None:intergenic
GTTGCAACTACTATTGCTGG+AGG 0.676385 8.2:+3388633 None:intergenic
AATTCATGTCATCTTCGAGG+AGG 0.678357 8.2:+3386675 None:intergenic
TTGACATAATTGTCTGAGAG+TGG 0.679864 8.2:+3390846 None:intergenic
GGATTGTATCAAGGATAACA+GGG 0.686516 8.2:+3387497 None:intergenic
ATAATTGTCTGAGAGTGGTG+GGG 0.713559 8.2:+3390851 None:intergenic
ATTATCTTCATCAAGCAGGG+AGG 0.725433 8.2:-3385935 MS.gene042253:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATATATTTAATGACA+AGG - chr8.2:3387132-3387151 MS.gene042253:intron 10.0%
!! ATAATAATAATAAGGAATAA+TGG + chr8.2:3385894-3385913 None:intergenic 10.0%
!! ATTATAAAACTTAAACAAAA+TGG + chr8.2:3385937-3385956 None:intergenic 10.0%
!!! AATATTTGTTTTTTTTATGA+TGG - chr8.2:3386337-3386356 MS.gene042253:intron 10.0%
!!! TTTGTTTAAGTTTTATAATA+TGG - chr8.2:3385938-3385957 MS.gene042253:CDS 10.0%
!! AAATATAAAAATATAAAGCC+TGG - chr8.2:3388490-3388509 MS.gene042253:intron 15.0%
!! TATTTATAATCAAATAGATG+TGG - chr8.2:3387321-3387340 MS.gene042253:intron 15.0%
!! TCTAGATAAGAAATAAAATA+AGG + chr8.2:3386898-3386917 None:intergenic 15.0%
!!! TTTTAAGTCTTATATTTCAT+TGG - chr8.2:3387722-3387741 MS.gene042253:intron 15.0%
!! AAAAACTATTAGCAAAGATT+TGG - chr8.2:3386584-3386603 MS.gene042253:intron 20.0%
!! AAGCAATTATAGAAAGATAA+TGG + chr8.2:3388275-3388294 None:intergenic 20.0%
!! ATAACTTTATCATATTACCT+GGG + chr8.2:3389850-3389869 None:intergenic 20.0%
!! ATATAGAATGGTTTAAACTT+GGG - chr8.2:3389056-3389075 MS.gene042253:intron 20.0%
!! ATCCATATCAATCAATTAAA+TGG + chr8.2:3390054-3390073 None:intergenic 20.0%
!! ATTAATTACGAAAAAGCTAA+TGG + chr8.2:3389454-3389473 None:intergenic 20.0%
!! TAGACTGAAACAATATAATT+TGG + chr8.2:3390245-3390264 None:intergenic 20.0%
!! TATGCTAAATAACACTATTA+AGG + chr8.2:3388392-3388411 None:intergenic 20.0%
!! TTCTATCATAAACCATATTT+CGG + chr8.2:3386626-3386645 None:intergenic 20.0%
!! TTTAATTGATTGATATGGAT+TGG - chr8.2:3390054-3390073 MS.gene042253:intron 20.0%
!!! AAGTTTTATAATATGGTTTC+AGG - chr8.2:3385945-3385964 MS.gene042253:CDS 20.0%
!!! AGATTTTCTTGTGTTAATAA+TGG + chr8.2:3386963-3386982 None:intergenic 20.0%
!!! ATAATAAGGAATAATGGAAA+AGG + chr8.2:3385888-3385907 None:intergenic 20.0%
!!! ATTTGTTTTTTTTATGATGG+TGG - chr8.2:3386340-3386359 MS.gene042253:intron 20.0%
!!! ATTTTATTTCTTATCTAGAC+AGG - chr8.2:3386899-3386918 MS.gene042253:intron 20.0%
!!! TAATAAGGAATAATGGAAAA+GGG + chr8.2:3385887-3385906 None:intergenic 20.0%
!!! TATTCAATTTTTCAATCATC+AGG - chr8.2:3389123-3389142 MS.gene042253:intron 20.0%
!!! TTGTTGAAATCATTTTAGAT+AGG - chr8.2:3386711-3386730 MS.gene042253:CDS 20.0%
!!! TTTCTAAAAACATCATATCA+TGG - chr8.2:3389957-3389976 MS.gene042253:intron 20.0%
! AAACAGTCAGAATGAATTTA+AGG + chr8.2:3388833-3388852 None:intergenic 25.0%
! AATCTTTGATATTGTTTCCT+TGG - chr8.2:3390313-3390332 MS.gene042253:intron 25.0%
! ACATGAAAATCAATAATGCA+AGG + chr8.2:3390113-3390132 None:intergenic 25.0%
! AGATTTGGAAATTAATGAGT+TGG - chr8.2:3386599-3386618 MS.gene042253:intron 25.0%
! ATACAAGTCAAACTCTTATT+TGG - chr8.2:3390215-3390234 MS.gene042253:intron 25.0%
! ATACTATTTGCTTGAAAATG+AGG + chr8.2:3389734-3389753 None:intergenic 25.0%
! CAATTTGATTACTCATCAAT+TGG - chr8.2:3389272-3389291 MS.gene042253:intron 25.0%
! CACAAAATAACACTATAACA+TGG + chr8.2:3389509-3389528 None:intergenic 25.0%
! GATAACTTTATCATATTACC+TGG + chr8.2:3389851-3389870 None:intergenic 25.0%
! GATATAGAATGGTTTAAACT+TGG - chr8.2:3389055-3389074 MS.gene042253:intron 25.0%
! GATTAATGGCAAAATGAATT+TGG + chr8.2:3390142-3390161 None:intergenic 25.0%
! GTTACAAGTGCATTAAAAAA+AGG + chr8.2:3389005-3389024 None:intergenic 25.0%
! GTTTCGATACAATTATTTAC+TGG - chr8.2:3387629-3387648 MS.gene042253:intron 25.0%
! TCTATCATAAACCATATTTC+GGG + chr8.2:3386625-3386644 None:intergenic 25.0%
! TGGTTTATGATAGAACATTA+TGG - chr8.2:3386631-3386650 MS.gene042253:intron 25.0%
! TTATAAGTTTGTGATGCATA+TGG - chr8.2:3387752-3387771 MS.gene042253:intron 25.0%
! TTGATGAGTAATCAAATTGA+AGG + chr8.2:3389271-3389290 None:intergenic 25.0%
! TTTATAATATGGTTTCAGGA+TGG - chr8.2:3385949-3385968 MS.gene042253:CDS 25.0%
!! AACCTCTTTTGTAAAAAACA+GGG - chr8.2:3389587-3389606 MS.gene042253:intron 25.0%
!! ATGGTTGAAATCATTTTATG+TGG - chr8.2:3386494-3386513 MS.gene042253:intron 25.0%
!! CTTCAATGAGTTGTATTTTA+TGG - chr8.2:3387298-3387317 MS.gene042253:intron 25.0%
!! CTTTTTATTCTTATCTGCTT+AGG - chr8.2:3388582-3388601 MS.gene042253:CDS 25.0%
!! GAACATTTAGTTCAAAAGTT+GGG - chr8.2:3390389-3390408 MS.gene042253:intron 25.0%
!! GATCAACTTTCTTCAATTTT+AGG - chr8.2:3388009-3388028 MS.gene042253:CDS 25.0%
!! GTTTTGTGTATTTGATATGT+TGG - chr8.2:3387832-3387851 MS.gene042253:intron 25.0%
!! TCTTTGCTAATAGTTTTTCT+AGG + chr8.2:3386582-3386601 None:intergenic 25.0%
!! TGCCATTTAATTGATTGATA+TGG - chr8.2:3390049-3390068 MS.gene042253:intron 25.0%
!! TTCAACATACAAGTTTTCAA+AGG - chr8.2:3386286-3386305 MS.gene042253:intron 25.0%
!! TTTATGTGGATTTTGTAGTA+AGG - chr8.2:3386508-3386527 MS.gene042253:intron 25.0%
!!! ATTTTAGATAGGCACTTTTT+TGG - chr8.2:3386722-3386741 MS.gene042253:CDS 25.0%
!!! CATTTTCAAGCAAATAGTAT+AGG - chr8.2:3389734-3389753 MS.gene042253:CDS 25.0%
!!! CTTAATATGCATTTTGATGA+GGG + chr8.2:3390471-3390490 None:intergenic 25.0%
!!! TGTTGGTCTTTTTTTTTACA+TGG - chr8.2:3388791-3388810 MS.gene042253:intron 25.0%
!!! TTCATTTCTTATTTGCTATG+TGG - chr8.2:3386166-3386185 MS.gene042253:intron 25.0%
!!! TTGCATTATTGATTTTCATG+TGG - chr8.2:3390112-3390131 MS.gene042253:intron 25.0%
!!! TTTTAGAAAGTCAATCACAA+GGG + chr8.2:3389946-3389965 None:intergenic 25.0%
!!! TTTTAGATAGGCACTTTTTT+GGG - chr8.2:3386723-3386742 MS.gene042253:CDS 25.0%
!!! TTTTTAGAAAGTCAATCACA+AGG + chr8.2:3389947-3389966 None:intergenic 25.0%
AAAGTTGTCTTTCAAGCATT+TGG + chr8.2:3388078-3388097 None:intergenic 30.0%
AAATACACAAAACACACACA+AGG + chr8.2:3387825-3387844 None:intergenic 30.0%
AAATTTACTAATGCCCAACA+TGG + chr8.2:3389096-3389115 None:intergenic 30.0%
AACAAATATAATGCCAGACT+TGG + chr8.2:3389206-3389225 None:intergenic 30.0%
AACCATTCTATATCTTTCCA+AGG + chr8.2:3389049-3389068 None:intergenic 30.0%
AAGGGAACTAAAAAAGAAGT+TGG + chr8.2:3388536-3388555 None:intergenic 30.0%
AATATGAGGTCAAAATCTTC+CGG + chr8.2:3388648-3388667 None:intergenic 30.0%
AATGGCAAAATGAATTTGGA+TGG + chr8.2:3390138-3390157 None:intergenic 30.0%
AATTTACTAATGCCCAACAT+GGG + chr8.2:3389095-3389114 None:intergenic 30.0%
ACAAATATAATGCCAGACTT+GGG + chr8.2:3389205-3389224 None:intergenic 30.0%
AGAGATATGAAAATGAGTTG+AGG - chr8.2:3390834-3390853 MS.gene042253:intron 30.0%
AGGGAACTAAAAAAGAAGTT+GGG + chr8.2:3388535-3388554 None:intergenic 30.0%
AGTACAATTCACATCAGAAA+AGG + chr8.2:3390774-3390793 None:intergenic 30.0%
AGTACTTACAAAATTGCTCA+AGG + chr8.2:3388555-3388574 None:intergenic 30.0%
ATAAAAAGCAACGTTAACAG+AGG + chr8.2:3387919-3387938 None:intergenic 30.0%
ATAGATTATCTTCATCAAGC+AGG - chr8.2:3390731-3390750 MS.gene042253:intron 30.0%
ATCTTTGATGCAACATATCA+AGG - chr8.2:3387075-3387094 MS.gene042253:intron 30.0%
ATGAAATAACAAAAGGGAGA+TGG - chr8.2:3386868-3386887 MS.gene042253:intron 30.0%
ATGAGTAATCAAATTGAAGG+AGG + chr8.2:3389268-3389287 None:intergenic 30.0%
ATTTAATGACAAGGTTACCA+AGG - chr8.2:3387141-3387160 MS.gene042253:intron 30.0%
CAAGGATACTAGAAAATTAG+AGG + chr8.2:3390095-3390114 None:intergenic 30.0%
CAATTATTATCAGTGAGATG+TGG + chr8.2:3387513-3387532 None:intergenic 30.0%
CCATCCATGAAATAACAAAA+GGG - chr8.2:3386862-3386881 MS.gene042253:intron 30.0%
CTATTGCAGCATAAAAAGAA+AGG + chr8.2:3387585-3387604 None:intergenic 30.0%
CTCAACACAAAATTTCCAAA+AGG + chr8.2:3388465-3388484 None:intergenic 30.0%
CTCTGTCATTATGAAATTGA+AGG - chr8.2:3386417-3386436 MS.gene042253:intron 30.0%
CTCTTATAAATACCCATGTT+GGG - chr8.2:3389080-3389099 MS.gene042253:intron 30.0%
GGTACTTATATACCACAATT+TGG + chr8.2:3387687-3387706 None:intergenic 30.0%
GGTTACTACAATATACCAAA+CGG - chr8.2:3389613-3389632 MS.gene042253:intron 30.0%
GTACAATTCACATCAGAAAA+GGG + chr8.2:3390773-3390792 None:intergenic 30.0%
GTACTTACAAAATTGCTCAA+GGG + chr8.2:3388554-3388573 None:intergenic 30.0%
GTTATTACAAGACGAATATG+AGG + chr8.2:3388662-3388681 None:intergenic 30.0%
TAGATTATCTTCATCAAGCA+GGG - chr8.2:3390732-3390751 MS.gene042253:intron 30.0%
TATATCTTTCCAAGGTCAAA+GGG + chr8.2:3389041-3389060 None:intergenic 30.0%
TCCATCCATGAAATAACAAA+AGG - chr8.2:3386861-3386880 MS.gene042253:intron 30.0%
TCCTTAAACTAGCATACTTA+TGG + chr8.2:3390507-3390526 None:intergenic 30.0%
TCTCTTATAAATACCCATGT+TGG - chr8.2:3389079-3389098 MS.gene042253:intron 30.0%
TCTTTGATGCAACATATCAA+GGG - chr8.2:3387076-3387095 MS.gene042253:intron 30.0%
TGATTCGTCTGATTATTTGT+TGG - chr8.2:3388774-3388793 MS.gene042253:intron 30.0%
TGCTTGATGAAGATAATCTA+TGG + chr8.2:3390732-3390751 None:intergenic 30.0%
TGTATTAGATTATTCACCCA+TGG + chr8.2:3390164-3390183 None:intergenic 30.0%
TGTCATTATGAAATTGAAGG+TGG - chr8.2:3386420-3386439 MS.gene042253:intron 30.0%
TTGTATATGTGAGTCATTTC+TGG + chr8.2:3390689-3390708 None:intergenic 30.0%
TTTAGCTACATTAGATCACA+TGG + chr8.2:3388342-3388361 None:intergenic 30.0%
TTTGTGATGCATATGGTTAA+TGG - chr8.2:3387759-3387778 MS.gene042253:intron 30.0%
! ACCATAAGTATGCTAGTTTA+AGG - chr8.2:3390503-3390522 MS.gene042253:intron 30.0%
! AGATAATCTATGGCAGTTTT+TGG + chr8.2:3390722-3390741 None:intergenic 30.0%
! ATTATTCACCCATGGATTAA+TGG + chr8.2:3390156-3390175 None:intergenic 30.0%
! CAGAGCTATTATATAGCTTT+TGG + chr8.2:3387885-3387904 None:intergenic 30.0%
! CATTATATTTGTTAGTGAGC+AGG - chr8.2:3389213-3389232 MS.gene042253:intron 30.0%
! CTTTTGTAAAAAACAGGGTA+AGG - chr8.2:3389592-3389611 MS.gene042253:intron 30.0%
! GAACCTCTTTTGTAAAAAAC+AGG - chr8.2:3389586-3389605 MS.gene042253:intron 30.0%
! GGAACATTTAGTTCAAAAGT+TGG - chr8.2:3390388-3390407 MS.gene042253:intron 30.0%
! GTAATGACTAGTGTTGAAAA+GGG - chr8.2:3390563-3390582 MS.gene042253:intron 30.0%
! TAAGTATGCTAGTTTAAGGA+TGG - chr8.2:3390507-3390526 MS.gene042253:intron 30.0%
! TCATTTTGCCATTAATCCAT+GGG - chr8.2:3390145-3390164 MS.gene042253:intron 30.0%
! TTCATTTTGCCATTAATCCA+TGG - chr8.2:3390144-3390163 MS.gene042253:intron 30.0%
!! AAAATTGCCTTTGGAGTAAT+TGG + chr8.2:3385864-3385883 None:intergenic 30.0%
!! AAATGCTGTTTCTTCAATTC+AGG - chr8.2:3390538-3390557 MS.gene042253:intron 30.0%
!! ATTGTATACTTGTGCTGTTT+AGG - chr8.2:3388174-3388193 MS.gene042253:intron 30.0%
!! GCTTAATATGCATTTTGATG+AGG + chr8.2:3390472-3390491 None:intergenic 30.0%
!! TTCTTTTCAAGCACTAGTTT+TGG - chr8.2:3386982-3387001 MS.gene042253:intron 30.0%
!! TTGTATACTTGTGCTGTTTA+GGG - chr8.2:3388175-3388194 MS.gene042253:intron 30.0%
!! TTGTTATTTCATGGATGGAT+CGG + chr8.2:3386860-3386879 None:intergenic 30.0%
!!! ATCTCCCTTTTGTTATTTCA+TGG + chr8.2:3386869-3386888 None:intergenic 30.0%
!!! TACCCTGTTTTTTACAAAAG+AGG + chr8.2:3389592-3389611 None:intergenic 30.0%
!!! TAGTGTTATTTTGTGCTCAA+CGG - chr8.2:3389514-3389533 MS.gene042253:CDS 30.0%
AAAAAAGAAGTTGGGAGACA+GGG + chr8.2:3388527-3388546 None:intergenic 35.0%
AATCTATGAGATAGACGAGA+CGG + chr8.2:3388909-3388928 None:intergenic 35.0%
AATGCATATTAAGCCTAGTG+CGG - chr8.2:3390478-3390497 MS.gene042253:intron 35.0%
ACAGAAGAACAACTTAGGTT+GGG - chr8.2:3386225-3386244 MS.gene042253:intron 35.0%
ACATTAAATGCACACGTTTG+GGG + chr8.2:3389814-3389833 None:intergenic 35.0%
ACTACAATATACCAAACGGT+AGG - chr8.2:3389617-3389636 MS.gene042253:intron 35.0%
AGAACGATGTTTATCCTCAA+GGG - chr8.2:3390367-3390386 MS.gene042253:intron 35.0%
AGACATTAAATGCACACGTT+TGG + chr8.2:3389816-3389835 None:intergenic 35.0%
AGCAATGAGAAGATACGAAT+CGG + chr8.2:3386097-3386116 None:intergenic 35.0%
AGTAATCAAATTGAAGGAGG+AGG + chr8.2:3389265-3389284 None:intergenic 35.0%
ATATACCACAATTTGGCCAA+CGG + chr8.2:3387680-3387699 None:intergenic 35.0%
ATCACATGGATAGATGAGAA+TGG + chr8.2:3388328-3388347 None:intergenic 35.0%
ATGAGACAGAAGAACAACTT+AGG - chr8.2:3386220-3386239 MS.gene042253:intron 35.0%
ATTAACTCCCAAGCATCTAA+TGG + chr8.2:3389697-3389716 None:intergenic 35.0%
ATTTCCACATTTCCATGAGT+CGG - chr8.2:3388424-3388443 MS.gene042253:intron 35.0%
CAAGCAAATAGTATAGGACT+TGG - chr8.2:3389740-3389759 MS.gene042253:CDS 35.0%
CTATATCTTTCCAAGGTCAA+AGG + chr8.2:3389042-3389061 None:intergenic 35.0%
CTCGAATGTCAATCAAGTTT+AGG - chr8.2:3387552-3387571 MS.gene042253:intron 35.0%
CTTTGATATTGTTTCCTTGG+AGG - chr8.2:3390316-3390335 MS.gene042253:intron 35.0%
CTTTGATGCAACATATCAAG+GGG - chr8.2:3387077-3387096 MS.gene042253:intron 35.0%
GACATTAAATGCACACGTTT+GGG + chr8.2:3389815-3389834 None:intergenic 35.0%
GACCTTGGAAAGATATAGAA+TGG - chr8.2:3389044-3389063 MS.gene042253:intron 35.0%
GGATTGTATCAAGGATAACA+GGG + chr8.2:3389176-3389195 None:intergenic 35.0%
GTATATAAGTACCATGCTCT+TGG - chr8.2:3387694-3387713 MS.gene042253:intron 35.0%
GTATATCCTACCATGTTGTT+CGG - chr8.2:3386808-3386827 MS.gene042253:intron 35.0%
TAAAAAAGAAGTTGGGAGAC+AGG + chr8.2:3388528-3388547 None:intergenic 35.0%
TACTAGACATGTTCCCAATA+CGG + chr8.2:3386372-3386391 None:intergenic 35.0%
TAGATGTGGTGACTAACAAA+TGG - chr8.2:3387335-3387354 MS.gene042253:intron 35.0%
TATATCCTACCATGTTGTTC+GGG - chr8.2:3386809-3386828 MS.gene042253:intron 35.0%
TCACATGGATAGATGAGAAT+GGG + chr8.2:3388327-3388346 None:intergenic 35.0%
TGAAATTCATGTCATCTTCG+AGG + chr8.2:3390001-3390020 None:intergenic 35.0%
TGATATGTTGGACCTATGTT+GGG - chr8.2:3387844-3387863 MS.gene042253:intron 35.0%
TGATGCATATGGTTAATGGA+TGG - chr8.2:3387763-3387782 MS.gene042253:CDS 35.0%
TGTATCGAAACAAACACAAC+AGG + chr8.2:3387620-3387639 None:intergenic 35.0%
TTAAGAAATCGATTGTGCTG+TGG + chr8.2:3388715-3388734 None:intergenic 35.0%
TTACAAAAGAGGTTCTTTCC+AGG + chr8.2:3389581-3389600 None:intergenic 35.0%
TTCAAAAGTTGGGATGTCTT+TGG - chr8.2:3390399-3390418 MS.gene042253:intron 35.0%
TTCAAACCATTTCCCAACAT+AGG + chr8.2:3387859-3387878 None:intergenic 35.0%
TTCTCTTCGCATTTGAATTG+TGG - chr8.2:3388145-3388164 MS.gene042253:intron 35.0%
TTCTTATCTAGACAGGTTCT+GGG - chr8.2:3386906-3386925 MS.gene042253:intron 35.0%
TTGAACTAAATGTTCCCTTG+AGG + chr8.2:3390384-3390403 None:intergenic 35.0%
TTGACATAATTGTCTGAGAG+TGG + chr8.2:3385827-3385846 None:intergenic 35.0%
TTGATATGTTGGACCTATGT+TGG - chr8.2:3387843-3387862 MS.gene042253:intron 35.0%
TTGTATCATGTGCAGAAGAA+AGG + chr8.2:3386757-3386776 None:intergenic 35.0%
TTTCTTATCTAGACAGGTTC+TGG - chr8.2:3386905-3386924 MS.gene042253:intron 35.0%
TTTCTTCAATTCAGGAGGTT+AGG - chr8.2:3390606-3390625 MS.gene042253:intron 35.0%
! AAACTACAATTCCACTGACT+CGG - chr8.2:3386464-3386483 MS.gene042253:intron 35.0%
! AAGGGGTTTTTCATACCTTT+TGG - chr8.2:3388447-3388466 MS.gene042253:intron 35.0%
! ATGCATATGGTTAATGGATG+GGG - chr8.2:3387765-3387784 MS.gene042253:CDS 35.0%
! GATGCATATGGTTAATGGAT+GGG - chr8.2:3387764-3387783 MS.gene042253:CDS 35.0%
! GGTAATGACTAGTGTTGAAA+AGG - chr8.2:3390562-3390581 MS.gene042253:intron 35.0%
!! GTTTGCTGTTTCTTCAATTC+AGG - chr8.2:3390598-3390617 MS.gene042253:intron 35.0%
!! TGTTATTTCATGGATGGATC+GGG + chr8.2:3386859-3386878 None:intergenic 35.0%
!!! CCCTTTTGTTATTTCATGGA+TGG + chr8.2:3386865-3386884 None:intergenic 35.0%
!!! GAAAGACAACTTTTTTCGCT+TGG - chr8.2:3388085-3388104 MS.gene042253:intron 35.0%
AAAAGCAACGTTAACAGAGG+TGG + chr8.2:3387916-3387935 None:intergenic 40.0%
AACCGATGTTCCCAGTTAAT+CGG + chr8.2:3390269-3390288 None:intergenic 40.0%
AATTCATGTCATCTTCGAGG+AGG + chr8.2:3389998-3390017 None:intergenic 40.0%
ACATAATTGTCTGAGAGTGG+TGG + chr8.2:3385824-3385843 None:intergenic 40.0%
ACTGTTGCAACTACTATTGC+TGG + chr8.2:3388043-3388062 None:intergenic 40.0%
AGAATCACTGAAGGCAAATC+TGG + chr8.2:3388223-3388242 None:intergenic 40.0%
AGTAAGGAGAGTAGATCAGA+TGG - chr8.2:3386524-3386543 MS.gene042253:intron 40.0%
AGTAGCACTCATGAAACCTT+GGG + chr8.2:3390435-3390454 None:intergenic 40.0%
ATAATTGTCTGAGAGTGGTG+GGG + chr8.2:3385822-3385841 None:intergenic 40.0%
ATATTGTTTCCTTGGAGGAG+GGG - chr8.2:3390321-3390340 MS.gene042253:intron 40.0%
ATCAGAAAAGGGTTTCCTAC+AGG + chr8.2:3390762-3390781 None:intergenic 40.0%
ATCATGTGCAGAAGAAAGGA+AGG + chr8.2:3386753-3386772 None:intergenic 40.0%
ATTATCTTCATCAAGCAGGG+AGG - chr8.2:3390735-3390754 MS.gene042253:intron 40.0%
CATAATTGTCTGAGAGTGGT+GGG + chr8.2:3385823-3385842 None:intergenic 40.0%
CCATATAAAATCCGAGTCAG+TGG + chr8.2:3386478-3386497 None:intergenic 40.0%
CGCATATCCATTAGATGCTT+GGG - chr8.2:3389687-3389706 MS.gene042253:CDS 40.0%
CGGATTGTATCAAGGATAAC+AGG + chr8.2:3389177-3389196 None:intergenic 40.0%
GACAGAAGAACAACTTAGGT+TGG - chr8.2:3386224-3386243 MS.gene042253:intron 40.0%
GACAGGGCTTATATAATTCC+AGG + chr8.2:3388511-3388530 None:intergenic 40.0%
GAGAACGATGTTTATCCTCA+AGG - chr8.2:3390366-3390385 MS.gene042253:intron 40.0%
GATATTGTTTCCTTGGAGGA+GGG - chr8.2:3390320-3390339 MS.gene042253:intron 40.0%
GATCCATATTCACGTTAGTC+CGG - chr8.2:3388872-3388891 MS.gene042253:intron 40.0%
GCAAAGATCATGTACCATCA+TGG - chr8.2:3387207-3387226 MS.gene042253:intron 40.0%
GGAAAAGGGAAAATTGCCTT+TGG + chr8.2:3385873-3385892 None:intergenic 40.0%
GTTGTTGTCATGTGACTGAA+AGG - chr8.2:3389541-3389560 MS.gene042253:intron 40.0%
TACACACACAGAATCACTGA+AGG + chr8.2:3388232-3388251 None:intergenic 40.0%
TAGATGGAGGAACATTGAGA+AGG - chr8.2:3387236-3387255 MS.gene042253:intron 40.0%
TATAAGTACCATGCTCTTGG+AGG - chr8.2:3387697-3387716 MS.gene042253:intron 40.0%
TCAATTCAGGAGGTTAGGAA+AGG - chr8.2:3390611-3390630 MS.gene042253:intron 40.0%
TCCATCTAACAAAGCCATGA+TGG + chr8.2:3387224-3387243 None:intergenic 40.0%
TCCATTGCAATTGCATTGCA+CGG + chr8.2:3387364-3387383 None:intergenic 40.0%
TCTGTCTCATTTACTCACTC+AGG + chr8.2:3386210-3386229 None:intergenic 40.0%
TGAAATTGAAGGTGGCTATC+TGG - chr8.2:3386428-3386447 MS.gene042253:intron 40.0%
TGATATTGTTTCCTTGGAGG+AGG - chr8.2:3390319-3390338 MS.gene042253:intron 40.0%
TTAAAACACCTCCAAGAGCA+TGG + chr8.2:3387708-3387727 None:intergenic 40.0%
TTAACTTTACATCTCGCCGT+TGG - chr8.2:3387661-3387680 MS.gene042253:intron 40.0%
TTACTTGCATGCCAAGTTCA+CGG + chr8.2:3387015-3387034 None:intergenic 40.0%
TTCAGAACATTTGTCCTGTG+AGG - chr8.2:3389377-3389396 MS.gene042253:intron 40.0%
TTCAGTCTACCCGATTAACT+GGG - chr8.2:3390256-3390275 MS.gene042253:intron 40.0%
TTTCAGTCTACCCGATTAAC+TGG - chr8.2:3390255-3390274 MS.gene042253:intron 40.0%
! AACTATTTCTCATGCCTCAC+AGG + chr8.2:3389394-3389413 None:intergenic 40.0%
! AAGCCTTATCCCACTAATTG+GGG + chr8.2:3386680-3386699 None:intergenic 40.0%
! AAGGCACAAGAGTTGGTTTA+AGG - chr8.2:3387255-3387274 MS.gene042253:intron 40.0%
! CAAGCCTTATCCCACTAATT+GGG + chr8.2:3386681-3386700 None:intergenic 40.0%
! CAGTCATTTGCCTTTTCCAA+GGG + chr8.2:3387107-3387126 None:intergenic 40.0%
! GTTATTTCATGGATGGATCG+GGG + chr8.2:3386858-3386877 None:intergenic 40.0%
! TAATGAGTTGGCCCGAAATA+TGG - chr8.2:3386611-3386630 MS.gene042253:intron 40.0%
! TCAGTCATTTGCCTTTTCCA+AGG + chr8.2:3387108-3387127 None:intergenic 40.0%
! TCTCATTGCTGTTGTTGTTG+TGG - chr8.2:3386107-3386126 MS.gene042253:intron 40.0%
! TGACTAGTGTTGAAAAGGGA+TGG - chr8.2:3390567-3390586 MS.gene042253:intron 40.0%
! TGCATATGGTTAATGGATGG+GGG - chr8.2:3387766-3387785 MS.gene042253:CDS 40.0%
! TTTACTCACTCAGGAGTGTA+AGG + chr8.2:3386201-3386220 None:intergenic 40.0%
!! AAGAACAACTTAGGTTGGGA+GGG - chr8.2:3386229-3386248 MS.gene042253:intron 40.0%
!! ACCATCATGGCTTTGTTAGA+TGG - chr8.2:3387220-3387239 MS.gene042253:intron 40.0%
!! ATCATGGCTTTGTTAGATGG+AGG - chr8.2:3387223-3387242 MS.gene042253:intron 40.0%
!! TAACTGGGAACATCGGTTTA+AGG - chr8.2:3390271-3390290 MS.gene042253:intron 40.0%
!! TGCTGTTTCTTCAATTCAGG+AGG - chr8.2:3390541-3390560 MS.gene042253:intron 40.0%
!! TTGCCTTTGGAGTAATTGGT+CGG + chr8.2:3385860-3385879 None:intergenic 40.0%
!!! CCACTGACTCGGATTTTATA+TGG - chr8.2:3386475-3386494 MS.gene042253:intron 40.0%
!!! GACTGTTTTTGCTTTCCAGA+GGG - chr8.2:3388845-3388864 MS.gene042253:intron 40.0%
!!! GCTTTGCCTCATCTTTTTTC+CGG - chr8.2:3386013-3386032 MS.gene042253:CDS 40.0%
!!! GTGGAATTGTAGTTTTGTGC+AGG + chr8.2:3386459-3386478 None:intergenic 40.0%
!!! TGACTGTTTTTGCTTTCCAG+AGG - chr8.2:3388844-3388863 MS.gene042253:intron 40.0%
!!! TTTTTTCGCTTGGAACCTTG+CGG - chr8.2:3388095-3388114 MS.gene042253:intron 40.0%
AAAGCCAACAGGAGTTGAAG+GGG - chr8.2:3387183-3387202 MS.gene042253:intron 45.0%
AAAGTCAATCACAAGGGACG+TGG + chr8.2:3389940-3389959 None:intergenic 45.0%
AAGCCTGAATGAGCAGCATA+AGG + chr8.2:3387988-3388007 None:intergenic 45.0%
AAGGAGAGTAGATCAGATGG+AGG - chr8.2:3386527-3386546 MS.gene042253:intron 45.0%
ACAAGGTTACCAAGGTTGCT+AGG - chr8.2:3387149-3387168 MS.gene042253:intron 45.0%
ACATTTCCATGAGTCGGAAG+GGG - chr8.2:3388430-3388449 MS.gene042253:intron 45.0%
ACCCGATTAACTGGGAACAT+CGG - chr8.2:3390264-3390283 MS.gene042253:intron 45.0%
ACCGATGTTCCCAGTTAATC+GGG + chr8.2:3390268-3390287 None:intergenic 45.0%
AGCCTGAATGAGCAGCATAA+GGG + chr8.2:3387987-3388006 None:intergenic 45.0%
AGGAGAGTAGATCAGATGGA+GGG - chr8.2:3386528-3386547 MS.gene042253:intron 45.0%
AGTCAAATCACTAGAGGCAG+AGG - chr8.2:3386552-3386571 MS.gene042253:intron 45.0%
ATACTTATGGTAGCCGCACT+AGG + chr8.2:3390494-3390513 None:intergenic 45.0%
ATCTTTCCAAGGTCAAAGGG+TGG + chr8.2:3389038-3389057 None:intergenic 45.0%
ATGAAGTATGCAGTCACGAC+CGG + chr8.2:3386035-3386054 None:intergenic 45.0%
ATGTCTGTTTGAATCAGCCC+AGG - chr8.2:3389830-3389849 MS.gene042253:intron 45.0%
ATTAGTGGGATAAGGCTTGG+TGG - chr8.2:3386682-3386701 MS.gene042253:CDS 45.0%
ATTCAGGAGGTTAGGAAAGG+TGG - chr8.2:3390614-3390633 MS.gene042253:intron 45.0%
CAAAGCAAGTGAGTTCTCTC+CGG - chr8.2:3388626-3388645 MS.gene042253:CDS 45.0%
CAAAGCCAACAGGAGTTGAA+GGG - chr8.2:3387182-3387201 MS.gene042253:intron 45.0%
CACATTTCCATGAGTCGGAA+GGG - chr8.2:3388429-3388448 MS.gene042253:intron 45.0%
CACTGGCAAAAACTGTCTGA+CGG + chr8.2:3388684-3388703 None:intergenic 45.0%
CCAATTAGTGGGATAAGGCT+TGG - chr8.2:3386679-3386698 MS.gene042253:CDS 45.0%
CTTATCCCACTAATTGGGGT+CGG + chr8.2:3386676-3386695 None:intergenic 45.0%
GAATATGGATCACATCCCTC+TGG + chr8.2:3388863-3388882 None:intergenic 45.0%
GAGGGTAGTCAAATCACTAG+AGG - chr8.2:3386546-3386565 MS.gene042253:intron 45.0%
GAGTAGCACTCATGAAACCT+TGG + chr8.2:3390436-3390455 None:intergenic 45.0%
GCAGTCTGAGAAGTCGAAAA+AGG - chr8.2:3389899-3389918 MS.gene042253:intron 45.0%
GCGCATATCCATTAGATGCT+TGG - chr8.2:3389686-3389705 MS.gene042253:CDS 45.0%
GGATGGGGGAATTACAGATT+AGG - chr8.2:3387780-3387799 MS.gene042253:CDS 45.0%
GGTTTCAGGATGGAAGAAGT+TGG - chr8.2:3385959-3385978 MS.gene042253:CDS 45.0%
GTTGCAACTACTATTGCTGG+AGG + chr8.2:3388040-3388059 None:intergenic 45.0%
GTTGGACCTATGTTGGGAAA+TGG - chr8.2:3387850-3387869 MS.gene042253:intron 45.0%
TACCAAGGTTGCTAGGATAC+TGG - chr8.2:3387156-3387175 MS.gene042253:intron 45.0%
TACTTGCATGCCAAGTTCAC+GGG + chr8.2:3387014-3387033 None:intergenic 45.0%
TAGACATGTTCCCAATACGG+CGG + chr8.2:3386369-3386388 None:intergenic 45.0%
TATTGTTTCCTTGGAGGAGG+GGG - chr8.2:3390322-3390341 MS.gene042253:intron 45.0%
TCACGACCGGAAAAAAGATG+AGG + chr8.2:3386022-3386041 None:intergenic 45.0%
TCATGTGACTGAAAGGTCAC+AGG - chr8.2:3389548-3389567 MS.gene042253:intron 45.0%
TCCGTGCAATGCAATTGCAA+TGG - chr8.2:3387360-3387379 MS.gene042253:intron 45.0%
TCTGAGAAGTCGAAAAAGGC+TGG - chr8.2:3389903-3389922 MS.gene042253:intron 45.0%
TCTTTCCAAGGTCAAAGGGT+GGG + chr8.2:3389037-3389056 None:intergenic 45.0%
TGACTGCATACTTCATGCTC+AGG - chr8.2:3386039-3386058 MS.gene042253:CDS 45.0%
TGAGATGTGGCTGCAAAATG+TGG + chr8.2:3387500-3387519 None:intergenic 45.0%
TGGATATGTCATGCCTACAC+CGG - chr8.2:3385979-3385998 MS.gene042253:CDS 45.0%
TGTGGCTGCAAAATGTGGAA+TGG + chr8.2:3387495-3387514 None:intergenic 45.0%
TTCCCGACCAATTACTCCAA+AGG - chr8.2:3385854-3385873 MS.gene042253:CDS 45.0%
TTCCCTTATGCTGCTCATTC+AGG - chr8.2:3387982-3388001 MS.gene042253:CDS 45.0%
! CATTGAGAAGGCACAAGAGT+TGG - chr8.2:3387248-3387267 MS.gene042253:intron 45.0%
! CCAAGCCTTATCCCACTAAT+TGG + chr8.2:3386682-3386701 None:intergenic 45.0%
! CTTTGGCTTCAAATCACCCA+AGG - chr8.2:3390416-3390435 MS.gene042253:intron 45.0%
! GATGAGGCAAAGCTTGTTTC+TGG + chr8.2:3386006-3386025 None:intergenic 45.0%
! GCACAAGAGTTGGTTTAAGG+TGG - chr8.2:3387258-3387277 MS.gene042253:intron 45.0%
! TCAGGAGTGTAAGGAAACTC+AGG + chr8.2:3386192-3386211 None:intergenic 45.0%
! TTTTTCGCTTGGAACCTTGC+GGG - chr8.2:3388096-3388115 MS.gene042253:intron 45.0%
!! AGAACAACTTAGGTTGGGAG+GGG - chr8.2:3386230-3386249 MS.gene042253:intron 45.0%
!! GAAGAACAACTTAGGTTGGG+AGG - chr8.2:3386228-3386247 MS.gene042253:intron 45.0%
!! TGCCTTTGGAGTAATTGGTC+GGG + chr8.2:3385859-3385878 None:intergenic 45.0%
!! TGTGCAGCAGAAATGGACTA+AGG - chr8.2:3388741-3388760 MS.gene042253:intron 45.0%
!! GAATAATAATAATAATAATA+AGG + chr8.2:3385902-3385921 None:intergenic 5.0%
!!! ATAAAAAAAACAAATATTTT+TGG + chr8.2:3386335-3386354 None:intergenic 5.0%
!!! TAAAAAAAACAAATATTTTT+GGG + chr8.2:3386334-3386353 None:intergenic 5.0%
AAGGGGAACACCCTTGGAAA+AGG - chr8.2:3387094-3387113 MS.gene042253:intron 50.0%
AAGGTCACAGGTTCAAGTCC+TGG - chr8.2:3389560-3389579 MS.gene042253:intron 50.0%
ACAAAGCTCCCGCATATGCA+GGG + chr8.2:3389656-3389675 None:intergenic 50.0%
ACGAAGCTGTGCAGCAGAAA+TGG - chr8.2:3388734-3388753 MS.gene042253:intron 50.0%
ACTAATTGGGGTCGGCTACA+TGG + chr8.2:3386668-3386687 None:intergenic 50.0%
AGCCAGTATCCTAGCAACCT+TGG + chr8.2:3387161-3387180 None:intergenic 50.0%
AGGAGGGGGAATCAAGAATG+GGG - chr8.2:3390336-3390355 MS.gene042253:intron 50.0%
ATCAACAACCAACACCCGCA+AGG + chr8.2:3388113-3388132 None:intergenic 50.0%
ATGAGATAGACGAGACGGCA+TGG + chr8.2:3388904-3388923 None:intergenic 50.0%
ATGTAGCCGACCCCAATTAG+TGG - chr8.2:3386667-3386686 MS.gene042253:CDS 50.0%
CACCAGCATTATAGTCTCGC+AGG - chr8.2:3390796-3390815 MS.gene042253:intron 50.0%
CATATCAAGGGGAACACCCT+TGG - chr8.2:3387088-3387107 MS.gene042253:intron 50.0%
CCACATTTCCATGAGTCGGA+AGG - chr8.2:3388428-3388447 MS.gene042253:intron 50.0%
CCACCGGACTAACGTGAATA+TGG + chr8.2:3388878-3388897 None:intergenic 50.0%
CCATATTCACGTTAGTCCGG+TGG - chr8.2:3388875-3388894 MS.gene042253:intron 50.0%
CCTTCCGACTCATGGAAATG+TGG + chr8.2:3388431-3388450 None:intergenic 50.0%
CGACCCCAATTAGTGGGATA+AGG - chr8.2:3386674-3386693 MS.gene042253:CDS 50.0%
CTCCTGCGAGACTATAATGC+TGG + chr8.2:3390801-3390820 None:intergenic 50.0%
CTTTCCAAGGTCAAAGGGTG+GGG + chr8.2:3389036-3389055 None:intergenic 50.0%
GAAAAACCCCTTCCGACTCA+TGG + chr8.2:3388439-3388458 None:intergenic 50.0%
GAGATAGAGCCCGAACAACA+TGG + chr8.2:3386821-3386840 None:intergenic 50.0%
GAGGAGGGGGAATCAAGAAT+GGG - chr8.2:3390335-3390354 MS.gene042253:intron 50.0%
GCAAAGCCAACAGGAGTTGA+AGG - chr8.2:3387181-3387200 MS.gene042253:intron 50.0%
GCAACAGATGTAGCAGCTAG+AGG - chr8.2:3390653-3390672 MS.gene042253:CDS 50.0%
GCATTATAGTCTCGCAGGAG+CGG - chr8.2:3390801-3390820 MS.gene042253:intron 50.0%
GGGGAATCAAGAATGGGGAA+CGG - chr8.2:3390341-3390360 MS.gene042253:intron 50.0%
GTGCTGTGGTATAGATGCAC+TGG + chr8.2:3388701-3388720 None:intergenic 50.0%
TAGAGCCCGAACAACATGGT+AGG + chr8.2:3386817-3386836 None:intergenic 50.0%
TCAATCACAAGGGACGTGGA+TGG + chr8.2:3389936-3389955 None:intergenic 50.0%
TCATGTCATCTTCGAGGAGG+AGG + chr8.2:3389995-3390014 None:intergenic 50.0%
TGAGATAGACGAGACGGCAT+GGG + chr8.2:3388903-3388922 None:intergenic 50.0%
TGTAGCCGACCCCAATTAGT+GGG - chr8.2:3386668-3386687 MS.gene042253:CDS 50.0%
TTCACGAGCAGCTTCTCTGT+TGG - chr8.2:3390022-3390041 MS.gene042253:intron 50.0%
TTGAAGGTGGCTATCTGGCT+TGG - chr8.2:3386433-3386452 MS.gene042253:intron 50.0%
! AATGCCAGACTTGGGAGCAT+CGG + chr8.2:3389197-3389216 None:intergenic 50.0%
! ATACTGGCTGCAAAGCCAAC+AGG - chr8.2:3387172-3387191 MS.gene042253:intron 50.0%
! ATGGTGGAATCCGCCGTATT+GGG - chr8.2:3386356-3386375 MS.gene042253:intron 50.0%
! TCTAATGGATATGCGCAGCC+CGG + chr8.2:3389682-3389701 None:intergenic 50.0%
!! GGCAAAGCTTGTTTCTGGAC+CGG + chr8.2:3386001-3386020 None:intergenic 50.0%
!! GGGAGCATCGGATTGTATCA+AGG + chr8.2:3389185-3389204 None:intergenic 50.0%
ATCAAGCAGGGAGGACCTGT+AGG - chr8.2:3390744-3390763 MS.gene042253:intron 55.0%
CAATCCGATGCTCCCAAGTC+TGG - chr8.2:3389190-3389209 MS.gene042253:intron 55.0%
CACAAAGCTCCCGCATATGC+AGG + chr8.2:3389657-3389676 None:intergenic 55.0%
CAGGAGGTTAGGAAAGGTGG+CGG - chr8.2:3390617-3390636 MS.gene042253:intron 55.0%
CATATGCAGGGTTCGGGAAG+GGG + chr8.2:3389644-3389663 None:intergenic 55.0%
CTTCCCGAACCCTGCATATG+CGG - chr8.2:3389644-3389663 MS.gene042253:intron 55.0%
CTTTCCCCACCCTTTGACCT+TGG - chr8.2:3389029-3389048 MS.gene042253:intron 55.0%
GCATATGCAGGGTTCGGGAA+GGG + chr8.2:3389645-3389664 None:intergenic 55.0%
GGAGGAGGGGGAATCAAGAA+TGG - chr8.2:3390334-3390353 MS.gene042253:intron 55.0%
TCTCGCCGTTGGCCAAATTG+TGG - chr8.2:3387672-3387691 MS.gene042253:intron 55.0%
TCTTGATTCCCCCTCCTCCA+AGG + chr8.2:3390333-3390352 None:intergenic 55.0%
TGCATGCCAAGTTCACGGGT+GGG + chr8.2:3387010-3387029 None:intergenic 55.0%
TGCTCCCCTTCAACTCCTGT+TGG + chr8.2:3387190-3387209 None:intergenic 55.0%
TTCCCGAACCCTGCATATGC+GGG - chr8.2:3389645-3389664 MS.gene042253:intron 55.0%
TTGCATGCCAAGTTCACGGG+TGG + chr8.2:3387011-3387030 None:intergenic 55.0%
! TATGCGGGAGCTTTGTGCAC+CGG - chr8.2:3389660-3389679 MS.gene042253:intron 55.0%
!! GATGGTGGAATCCGCCGTAT+TGG - chr8.2:3386355-3386374 MS.gene042253:intron 55.0%
!! GCGGGTGTTGGTTGTTGATG+AGG - chr8.2:3388114-3388133 MS.gene042253:intron 55.0%
!! GCTTGTTTCTGGACCGGTGT+AGG + chr8.2:3385995-3386014 None:intergenic 55.0%
CGCATATGCAGGGTTCGGGA+AGG + chr8.2:3389646-3389665 None:intergenic 60.0%
CTCCCGCATATGCAGGGTTC+GGG + chr8.2:3389650-3389669 None:intergenic 60.0%
GCTCCCGCATATGCAGGGTT+CGG + chr8.2:3389651-3389670 None:intergenic 60.0%
GCTTGGAACCTTGCGGGTGT+TGG - chr8.2:3388102-3388121 MS.gene042253:intron 60.0%
! ATGCGGGAGCTTTGTGCACC+GGG - chr8.2:3389661-3389680 MS.gene042253:intron 60.0%
! TTGGTGCCCACCCGTGAACT+TGG - chr8.2:3387001-3387020 MS.gene042253:intron 60.0%
CGGGAAGGGGTCCTACCGTT+TGG + chr8.2:3389631-3389650 None:intergenic 65.0%
CGAGACGGCATGGGCTCCAC+CGG + chr8.2:3388894-3388913 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 3385809 3390883 3385809 ID=MS.gene042253
chr8.2 mRNA 3385809 3390883 3385809 ID=MS.gene042253.t1;Parent=MS.gene042253
chr8.2 exon 3390840 3390883 3390840 ID=MS.gene042253.t1.exon1;Parent=MS.gene042253.t1
chr8.2 CDS 3390840 3390883 3390840 ID=cds.MS.gene042253.t1;Parent=MS.gene042253.t1
chr8.2 exon 3390632 3390725 3390632 ID=MS.gene042253.t1.exon2;Parent=MS.gene042253.t1
chr8.2 CDS 3390632 3390725 3390632 ID=cds.MS.gene042253.t1;Parent=MS.gene042253.t1
chr8.2 exon 3389662 3389775 3389662 ID=MS.gene042253.t1.exon3;Parent=MS.gene042253.t1
chr8.2 CDS 3389662 3389775 3389662 ID=cds.MS.gene042253.t1;Parent=MS.gene042253.t1
chr8.2 exon 3389416 3389538 3389416 ID=MS.gene042253.t1.exon4;Parent=MS.gene042253.t1
chr8.2 CDS 3389416 3389538 3389416 ID=cds.MS.gene042253.t1;Parent=MS.gene042253.t1
chr8.2 exon 3388557 3388661 3388557 ID=MS.gene042253.t1.exon5;Parent=MS.gene042253.t1
chr8.2 CDS 3388557 3388661 3388557 ID=cds.MS.gene042253.t1;Parent=MS.gene042253.t1
chr8.2 exon 3387930 3388088 3387930 ID=MS.gene042253.t1.exon6;Parent=MS.gene042253.t1
chr8.2 CDS 3387930 3388088 3387930 ID=cds.MS.gene042253.t1;Parent=MS.gene042253.t1
chr8.2 exon 3387760 3387828 3387760 ID=MS.gene042253.t1.exon7;Parent=MS.gene042253.t1
chr8.2 CDS 3387760 3387828 3387760 ID=cds.MS.gene042253.t1;Parent=MS.gene042253.t1
chr8.2 exon 3387458 3387547 3387458 ID=MS.gene042253.t1.exon8;Parent=MS.gene042253.t1
chr8.2 CDS 3387458 3387547 3387458 ID=cds.MS.gene042253.t1;Parent=MS.gene042253.t1
chr8.2 exon 3386649 3386789 3386649 ID=MS.gene042253.t1.exon9;Parent=MS.gene042253.t1
chr8.2 CDS 3386649 3386789 3386649 ID=cds.MS.gene042253.t1;Parent=MS.gene042253.t1
chr8.2 exon 3385809 3386072 3385809 ID=MS.gene042253.t1.exon10;Parent=MS.gene042253.t1
chr8.2 CDS 3385809 3386072 3385809 ID=cds.MS.gene042253.t1;Parent=MS.gene042253.t1
Gene Sequence

>MS.gene042253

ATGATACAGTCCCCACCACTCTCAGACAATTATGTCAATCACATGTTCCCGACCAATTACTCCAAAGGCAATTTTCCCTTTTCCATTATTCCTTATTATTATTATTATTATTCTCAAATTAATTTCCATTTTGTTTAAGTTTTATAATATGGTTTCAGGATGGAAGAAGTTGGATATGTCATGCCTACACCGGTCCAGAAACAAGCTTTGCCTCATCTTTTTTCCGGTCGTGACTGCATACTTCATGCTCAGGTTCTTTTTTTTTCTCTCTCTCTCTCTCTCTCTCCGATTCGTATCTTCTCATTGCTGTTGTTGTTGTGGCATTAATGATGATAAATACAATAATGTATACTCACTTTCATTTCTTATTTGCTATGTGGCCTGAGTTTCCTTACACTCCTGAGTGAGTAAATGAGACAGAAGAACAACTTAGGTTGGGAGGGGAAATAACTTGTGAAGAGATAGAATCAGAAAAATTTCAACATACAAGTTTTCAAAGGTTCAACATCTAATTATAAGCATCCCAAAAATATTTGTTTTTTTTATGATGGTGGAATCCGCCGTATTGGGAACATGTCTAGTATTCTATTCTGCAACTATTGATGAAGCTCTGTCATTATGAAATTGAAGGTGGCTATCTGGCTTGGCCTGCACAAAACTACAATTCCACTGACTCGGATTTTATATGGTTGAAATCATTTTATGTGGATTTTGTAGTAAGGAGAGTAGATCAGATGGAGGGTAGTCAAATCACTAGAGGCAGAGGAAGACCTAGAAAAACTATTAGCAAAGATTTGGAAATTAATGAGTTGGCCCGAAATATGGTTTATGATAGAACATTATGGCGTAATTTGATCCATGTAGCCGACCCCAATTAGTGGGATAAGGCTTGGTGGTTGTTGTTGTTGAAATCATTTTAGATAGGCACTTTTTTGGGCATGCCTTCCTTTCTTCTGCACATGATACAAATTCTATGAAGTTTCTATTATACTTTTCTATGTATATCCTACCATGTTGTTCGGGCTCTATCTCTGTCTAAGTATCATCCCCGATCCATCCATGAAATAACAAAAGGGAGATGGTTAACCTTATTTTATTTCTTATCTAGACAGGTTCTGGGAAGACACTTGCATACTTGCTTTTGATCTATTCCATTATTAACACAAGAAAATCTTCTTTTCAAGCACTAGTTTTGGTGCCCACCCGTGAACTTGGCATGCAAGTAAGATTTTGTATGAGCTATGATGTCATAGTGACATGTTAATTATCTTTGATGCAACATATCAAGGGGAACACCCTTGGAAAAGGCAAATGACTGAGTGCAAAAAATATATTTAATGACAAGGTTACCAAGGTTGCTAGGATACTGGCTGCAAAGCCAACAGGAGTTGAAGGGGAGCAAAGATCATGTACCATCATGGCTTTGTTAGATGGAGGAACATTGAGAAGGCACAAGAGTTGGTTTAAGGTGGAAATCTTTCATCATCTTCTTCAATGAGTTGTATTTTATGGTATTTATAATCAAATAGATGTGGTGACTAACAAATGGTTTCCGTGCAATGCAATTGCAATGGACTTTGTGTTTGCTTATATGTATATCTATCAGTTTGATATAAAAATTGACTCTTATTCAACATATGTGCAACTAATGCAGTTCATTTGTACTCAGTCAGTTAGTTTTTTCCATTCCACATTTTGCAGCCACATCTCACTGATAATAATTGATGCACAATACTGCAGTTTCTCGAATGTCAATCAAGTTTAGGATACTGTCCTTTCTTTTTATGCTGCAATAGTAAATTATTTAACCTGTTGTGTTTGTTTCGATACAATTATTTACTGGAGTAGTTATTTAACTTTACATCTCGCCGTTGGCCAAATTGTGGTATATAAGTACCATGCTCTTGGAGGTGTTTTAAGTCTTATATTTCATTGGATATATCTTATAAGTTTGTGATGCATATGGTTAATGGATGGGGGAATTACAGATTAGGCATGTATGATCAACTAATTCCTTGTGTGTGTTTTGTGTATTTGATATGTTGGACCTATGTTGGGAAATGGTTTGAATTTCCAAAAGCTATATAATAGCTCTGATTGAACACCACCTCTGTTAACGTTGCTTTTTATCTTTTGCTTAACTGCTCACTAGCTGCACTAGTATTATAGAGAATTCCCTTATGCTGCTCATTCAGGCTTTGATCAACTTTCTTCAATTTTAGGCTGAGCCTCCAGCAATAGTAGTTGCAACAGTTGAGAGTTTGTGCCAAATGCTTGAAAGACAACTTTTTTCGCTTGGAACCTTGCGGGTGTTGGTTGTTGATGAGGTAAAAGTTTTCTCTTCGCATTTGAATTGTGGCTTGTCATTGTATACTTGTGCTGTTTAGGGTAAGAACTAAGAAAGCGAAATTCCAGATTTGCCTTCAGTGATTCTGTGTGTGTATTTCAAAACATACAGCTGCACCATTATCTTTCTATAATTGCTTTAAAAACGATATAGAATGTTATTAGTCATCCCATTCTCATCTATCCATGTGATCTAATGTAGCTAAAGAAAGCAAGTAAAGTAATTTATAAGCACCTTAATAGTGTTATTTAGCATATTAGAGTACATTATTTCCACATTTCCATGAGTCGGAAGGGGTTTTTCATACCTTTTGGAAATTTTGTGTTGAGTTGAGAAATATAAAAATATAAAGCCTGGAATTATATAAGCCCTGTCTCCCAACTTCTTTTTTAGTTCCCTTGAGCAATTTTGTAAGTACTTATTATACTTTTTATTCTTATCTGCTTAGGTTGATTTCATTTTCAATTCTTCAAAGCAAGTGAGTTCTCTCCGGAAGATTTTGACCTCATATTCGTCTTGTAATAACCGTCAGACAGTTTTTGCCAGTGCATCTATACCACAGCACAATCGATTTCTTAACGAAGCTGTGCAGCAGAAATGGACTAAGGTATATTAATCTGATTCGTCTGATTATTTGTTGGTCTTTTTTTTTACATGGATTATTTGTTTGTCTGCCTTAAATTCATTCTGACTGTTTTTGCTTTCCAGAGGGATGTGATCCATATTCACGTTAGTCCGGTGGAGCCCATGCCGTCTCGTCTATCTCATAGATTTATAGTAAGAAATCTTGAGTATTAAAGTAACTTCTTGTATTTCTAATTTTCTATTACTTAAAACAAAACTTAGCCTTTTTTTAATGCACTTGTAACTCATCTTTCCCCACCCTTTGACCTTGGAAAGATATAGAATGGTTTAAACTTGGGTCTCTTATAAATACCCATGTTGGGCATTAGTAAATTTCTAATGCTATTCAATTTTTCAATCATCAGGTATGTGATATAAAAAGAAAACTACAAACCCTGTTATCCTTGATACAATCCGATGCTCCCAAGTCTGGCATTATATTTGTTAGTGAGCAGGTATGCTGATAATGTCTTCTTATATTACCTCCTCCTTCAATTTGATTACTCATCAATTGGATAATGCAATCAGTAGTCTATGCTCAGCGAGTAGATGAAATTTACTTTATAATTAGTAAGTGAATTACTTTGTTAATAATTTTTCAGAACATTTGTCCTGTGAGGCATGAGAAATAGTTGTAAGCTACATTAAATAATTTCAAAAATGAACTAATGCCATTAGCTTTTTCGTAATTAATGTTTGATGCATATTATAAGCGATGAGCGTTTTCCATGTTATAGTGTTATTTTGTGCTCAACGGTTAAGTTGTTGTCATGTGACTGAAAGGTCACAGGTTCAAGTCCTGGAAAGAACCTCTTTTGTAAAAAACAGGGTAAGGTTACTACAATATACCAAACGGTAGGACCCCTTCCCGAACCCTGCATATGCGGGAGCTTTGTGCACCGGGCTGCGCATATCCATTAGATGCTTGGGAGTTAATTTAGAGATCAGCTGCCTCATTTTCAAGCAAATAGTATAGGACTTGGTTGCTTGCATTATTTAGTACTTTACAGTTGACACCATTGAAATTATTACCCCAAACGTGTGCATTTAATGTCTGTTTGAATCAGCCCAGGTAATATGATAAAGTTATCAATCATCTAATATTATATATTCTATTATGCAGTCTGAGAAGTCGAAAAAGGCTGGTAATTCTCCATCCACGTCCCTTGTGATTGACTTTCTAAAAACATCATATCATGGTTCTTTAGATATCCTCCTCCTCGAAGATGACATGAATTTCAATTCACGAGCAGCTTCTCTGTTGGTAAGTGCCATTTAATTGATTGATATGGATTGGAAATCTCATTAGTAACCTCTAATTTTCTAGTATCCTTGCATTATTGATTTTCATGTGGCCATCCAAATTCATTTTGCCATTAATCCATGGGTGAATAATCTAATACAACTTATAACTGAGTTTGAAACAAGATTTAATATACAAGTCAAACTCTTATTTGGATAACCAAATTATATTGTTTCAGTCTACCCGATTAACTGGGAACATCGGTTTAAGGACAAACAACATTTTAATAAAATCTTTGATATTGTTTCCTTGGAGGAGGGGGAATCAAGAATGGGGAACGGCTGAGAACGATGTTTATCCTCAAGGGAACATTTAGTTCAAAAGTTGGGATGTCTTTGGCTTCAAATCACCCAAGGTTTCATGAGTGCTACTCTTATAGAATTGACCCTCATCAAAATGCATATTAAGCCTAGTGCGGCTACCATAAGTATGCTAGTTTAAGGATGGTAGTGTTAAAATGCTGTTTCTTCAATTCAGGAGGTAATGACTAGTGTTGAAAAGGGATGGTAATGATTGTTTGCTGTTTCTTCAATTCAGGAGGTTAGGAAAGGTGGCGGCTATCTTCTAGTAGCAACAGATGTAGCAGCTAGAGGAGTTGACTTTCCAGAAATGACTCACATATACAACTTTGATCTGCCAAAAACTGCCATAGATTATCTTCATCAAGCAGGGAGGACCTGTAGGAAACCCTTTTCTGATGTGAATTGTACTGTCACCAGCATTATAGTCTCGCAGGAGCGGTTTGTTCTGCAGAGATATGAAAATGAGTTGAGGTTTGTCTGTACAGAGCTTATTCCATAA
Protein sequence

>MS.gene042253.t1

MIQSPPLSDNYVNHMMEEVGYVMPTPVQKQALPHLFSGRDCILHAQTGSGKTLAYLLLIYSIINTRKSSFQALVLVPTRELGMQVTKVARILAAKPTGVEGEQRSCTIMALLDGGTLRRHKSWFKAEPPAIVVATVESLCQMLERQLFSLGTLRVLVVDEVDFIFNSSKQVSSLRKILTSYSSCNNRQTVFASASIPQHNRFLNEAVQQKWTKRDVIHIHVSPVEPMPSRLSHRFIVCDIKRKLQTLLSLIQSDAPKSGIIFVSEQSEKSKKAGNSPSTSLVIDFLKTSYHGSLDILLLEDDMNFNSRAASLLEVRKGGGYLLVATDVAARGVDFPEMTHIYNFDLPKTAIDYLHQAGRTCRKPFSDVNCTVTSIIVSQERFVLQRYENELRFVCTELIP