Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043239.t1 | AES77415.2 | 88.7 | 478 | 48 | 2 | 1 | 478 | 1 | 472 | 2.20E-185 | 659.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043239.t1 | G7L0X5 | 88.7 | 478 | 48 | 2 | 1 | 478 | 1 | 472 | 1.6e-185 | 659.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene85900 | MS.gene043239 | PPI |
| MS.gene043239 | MS.gene22316 | PPI |
| MS.gene043239 | MS.gene04307 | PPI |
| MS.gene043239 | MS.gene024674 | PPI |
| MS.gene043239 | MS.gene21656 | PPI |
| MS.gene043239 | MS.gene53118 | PPI |
| MS.gene043239 | MS.gene78555 | PPI |
| MS.gene043239 | MS.gene05659 | PPI |
| MS.gene043239 | MS.gene55323 | PPI |
| MS.gene043239 | MS.gene04185 | PPI |
| MS.gene94960 | MS.gene043239 | PPI |
| MS.gene043239 | MS.gene072735 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043239.t1 | MTR_7g010340 | 89.558 | 565 | 53 | 2 | 1 | 565 | 1 | 559 | 0.0 | 1004 |
| MS.gene043239.t1 | MTR_7g010340 | 82.677 | 127 | 21 | 1 | 522 | 647 | 434 | 560 | 1.68e-59 | 209 |
| MS.gene043239.t1 | MTR_7g010340 | 80.556 | 108 | 21 | 0 | 564 | 671 | 436 | 543 | 1.16e-46 | 174 |
| MS.gene043239.t1 | MTR_7g010340 | 86.903 | 565 | 52 | 3 | 1 | 565 | 1 | 543 | 0.0 | 961 |
| MS.gene043239.t1 | MTR_7g010340 | 82.677 | 127 | 21 | 1 | 522 | 647 | 418 | 544 | 1.50e-59 | 209 |
| MS.gene043239.t1 | MTR_7g010340 | 80.556 | 108 | 21 | 0 | 564 | 671 | 420 | 527 | 1.15e-46 | 174 |
| MS.gene043239.t1 | MTR_5g008420 | 59.701 | 670 | 130 | 16 | 1 | 539 | 1 | 661 | 0.0 | 649 |
| MS.gene043239.t1 | MTR_7g010360 | 66.275 | 255 | 47 | 6 | 1 | 235 | 1 | 236 | 6.86e-83 | 277 |
| MS.gene043239.t1 | MTR_1g016760 | 28.521 | 284 | 146 | 13 | 121 | 370 | 106 | 366 | 4.78e-14 | 75.9 |
| MS.gene043239.t1 | MTR_3g104280 | 27.798 | 277 | 151 | 12 | 127 | 370 | 86 | 346 | 9.25e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene043239.t1 | AT4G10070 | 33.544 | 632 | 282 | 32 | 1 | 542 | 1 | 584 | 8.62e-48 | 179 |
| MS.gene043239.t1 | AT1G33680 | 32.381 | 420 | 195 | 16 | 25 | 377 | 92 | 489 | 1.53e-42 | 165 |
Find 261 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCAATTTGAAGGATCTTT+TGG | 0.224942 | 7.2:+87091380 | MS.gene043239:CDS |
| ACCAGGCGAGATTCCGTATC+AGG | 0.257233 | 7.2:+87096518 | MS.gene043239:CDS |
| ACCAGGCGAGATTCCGTATC+AGG | 0.257233 | 7.2:+87097007 | MS.gene043239:CDS |
| CAGTTTCTCACTTTCTCATT+TGG | 0.272778 | 7.2:-87092125 | None:intergenic |
| ATGTTGTACCTAGGTAATTC+TGG | 0.295808 | 7.2:-87089243 | None:intergenic |
| TTTCAGCATGATACTTCTTC+TGG | 0.297812 | 7.2:+87089930 | MS.gene043239:CDS |
| TCATATGCACCTACTCCTTA+TGG | 0.300051 | 7.2:+87096081 | MS.gene043239:CDS |
| GAAAGGACTGTCCAAGTTAC+TGG | 0.320619 | 7.2:+87092941 | MS.gene043239:CDS |
| CTGAACAGGGGATGGACTTA+TGG | 0.321988 | 7.2:-87096310 | None:intergenic |
| TTCTTTAGAATCATCGGCTT+CGG | 0.324296 | 7.2:-87092921 | None:intergenic |
| CCAAGGAGCAGTTACGGTTC+TGG | 0.331193 | 7.2:+87096126 | MS.gene043239:CDS |
| TAATTGTAATTAATCTGAAC+AGG | 0.338077 | 7.2:-87096324 | None:intergenic |
| AAGTTTATCACCTTCTCATT+TGG | 0.340261 | 7.2:-87091564 | None:intergenic |
| ATAAGGACCGGTACAGTGTT+GGG | 0.343519 | 7.2:-87096277 | None:intergenic |
| GATCTGGTGGTCCACCACTA+TGG | 0.343715 | 7.2:+87095980 | MS.gene043239:CDS |
| AGTTGTTCAATTGATTTAGA+TGG | 0.351055 | 7.2:-87089882 | None:intergenic |
| GGTCAGCAAGGTTCACATTA+TGG | 0.354937 | 7.2:+87096003 | MS.gene043239:CDS |
| TATGGCAGGCCACCATTGTT+TGG | 0.373347 | 7.2:+87096561 | MS.gene043239:CDS |
| TATGGCAGGCCACCATTGTT+TGG | 0.373347 | 7.2:+87096684 | MS.gene043239:CDS |
| TATGGCAGGCCACCATTGTT+TGG | 0.374810 | 7.2:+87096804 | MS.gene043239:CDS |
| TATCTCAGGCCACCATTGTT+TGG | 0.375787 | 7.2:+87096927 | MS.gene043239:CDS |
| TCTTTAGAATCATCGGCTTC+GGG | 0.381660 | 7.2:-87092920 | None:intergenic |
| CGCCTGGTTGAGTGGCTCTA+GGG | 0.386919 | 7.2:-87096626 | None:intergenic |
| CGCCTGGTTGAGTGGCTCTA+GGG | 0.386919 | 7.2:-87096749 | None:intergenic |
| CGCCTGGTTGAGTGGCTCTA+GGG | 0.386919 | 7.2:-87096869 | None:intergenic |
| CGCCTGGTTGAGTGGCTCTA+GGG | 0.386919 | 7.2:-87096992 | None:intergenic |
| CTGTGAACATGGCATCCATT+AGG | 0.387204 | 7.2:-87091425 | None:intergenic |
| CTCCCCTGCTCAGGCTATTG+TGG | 0.387651 | 7.2:+87092076 | MS.gene043239:CDS |
| CTCCTCAACGAGAATCTCTT+TGG | 0.388726 | 7.2:-87089859 | None:intergenic |
| AACGAGAATCTCTTTGGTAT+TGG | 0.395832 | 7.2:-87089853 | None:intergenic |
| AATTGAGGTTCCTAGCAATA+AGG | 0.397890 | 7.2:+87089998 | MS.gene043239:CDS |
| AAGGCCTCACCAGAGTTTGC+AGG | 0.398717 | 7.2:+87096158 | MS.gene043239:CDS |
| AGGGGCCGCCCTCACACAAC+AGG | 0.399074 | 7.2:+87096178 | MS.gene043239:CDS |
| ACTTATGGCCGAAGAAGAAT+TGG | 0.406832 | 7.2:+87089120 | None:intergenic |
| ATCTGGTGGTCCACCACTAT+GGG | 0.410501 | 7.2:+87095981 | MS.gene043239:CDS |
| TCCCCTGCTCAGGCTATTGT+GGG | 0.411748 | 7.2:+87092077 | MS.gene043239:CDS |
| TTGCTTGAGCCCAGGCTTGA+GGG | 0.412088 | 7.2:-87096395 | None:intergenic |
| AAGGACAACATCCAGTCTTA+TGG | 0.414360 | 7.2:+87097087 | MS.gene043239:CDS |
| TCGCCTGGTTGAGTGGCTCT+AGG | 0.418678 | 7.2:-87096504 | None:intergenic |
| TCGCCTGGTTGAGTGGCTCT+AGG | 0.418678 | 7.2:-87096627 | None:intergenic |
| TCGCCTGGTTGAGTGGCTCT+AGG | 0.418678 | 7.2:-87096750 | None:intergenic |
| TCGCCTGGTTGAGTGGCTCT+AGG | 0.418678 | 7.2:-87096870 | None:intergenic |
| TCGCCTGGTTGAGTGGCTCT+AGG | 0.418678 | 7.2:-87096993 | None:intergenic |
| AACAACAACCAATTCTTCTT+CGG | 0.421576 | 7.2:-87089128 | None:intergenic |
| GCCTCTTATCACCAGTAACT+TGG | 0.424651 | 7.2:-87092952 | None:intergenic |
| AACAGGGGTTATGATCATTA+TGG | 0.425468 | 7.2:+87096195 | MS.gene043239:CDS |
| GATGCACCTCCACAGCAGTA+TGG | 0.435538 | 7.2:+87096420 | MS.gene043239:CDS |
| ATATGAGTTCGAAAACCTAA+TGG | 0.435925 | 7.2:+87091410 | MS.gene043239:CDS |
| TACCGTCCGCCACAAGGATC+TGG | 0.447453 | 7.2:+87095964 | MS.gene043239:CDS |
| GTGGCGGACGGTAGGCCTGC+TGG | 0.447974 | 7.2:-87095954 | None:intergenic |
| GATTGATTATGAGAGGGATA+TGG | 0.448365 | 7.2:-87096060 | None:intergenic |
| CTTTAAGGAGTTCAATTTGA+AGG | 0.450357 | 7.2:+87091371 | MS.gene043239:intron |
| CATGGCAGGCCACCATTGTA+TGG | 0.454068 | 7.2:+87097050 | MS.gene043239:CDS |
| GAAATTCCACAGGCTGATGC+TGG | 0.457417 | 7.2:+87091519 | MS.gene043239:intron |
| TAGGGTGGCCGCCATAAGAC+TGG | 0.458568 | 7.2:-87097098 | None:intergenic |
| GACAAAGGAAGCCTTGAGTC+AGG | 0.459926 | 7.2:+87092997 | MS.gene043239:CDS |
| GCCAGAGGAAAATGCTCATT+CGG | 0.461954 | 7.2:+87089779 | MS.gene043239:CDS |
| TGCATCATTTGCTTGAGCCC+AGG | 0.464220 | 7.2:-87096403 | None:intergenic |
| TATGGAAAGCCACCATTGTA+TGG | 0.466268 | 7.2:+87096438 | MS.gene043239:CDS |
| GAAATTCCACAGGCTGATGC+TGG | 0.467198 | 7.2:+87092023 | MS.gene043239:intron |
| TGATCATTATGGTGGACAAA+GGG | 0.467199 | 7.2:+87096206 | MS.gene043239:CDS |
| GAGCAGTTACGGTTCTGGTT+GGG | 0.467510 | 7.2:+87096131 | MS.gene043239:CDS |
| TCGAGGCCTCTCCCCTGCTC+AGG | 0.468246 | 7.2:+87092067 | MS.gene043239:CDS |
| TGGAAATTATCCTCAACATA+TGG | 0.468726 | 7.2:+87096101 | MS.gene043239:CDS |
| GATAGATCTGGGATGCGGGG+CGG | 0.470004 | 7.2:-87096253 | None:intergenic |
| CCTCCATATGGATATTGTGC+AGG | 0.471773 | 7.2:-87096360 | None:intergenic |
| CCCTGATACGGAATCTCGCC+TGG | 0.475637 | 7.2:-87096519 | None:intergenic |
| CCCTGATACGGAATCTCGCC+TGG | 0.475637 | 7.2:-87097008 | None:intergenic |
| GGACAACATCCAGAGTCTTA+TGG | 0.475815 | 7.2:+87096600 | MS.gene043239:CDS |
| GGACAACATCCAGAGTCTTA+TGG | 0.475815 | 7.2:+87096843 | MS.gene043239:CDS |
| TAAAGATAATTCAGAAGAAA+CGG | 0.480498 | 7.2:+87089821 | MS.gene043239:CDS |
| GGGGATAGATCTGGGATGCG+GGG | 0.482378 | 7.2:-87096256 | None:intergenic |
| GGCCTGCCATGTGATTGTGC+TGG | 0.483736 | 7.2:-87097038 | None:intergenic |
| TCATTTGGAACTTCACGTGC+AGG | 0.483750 | 7.2:-87091549 | None:intergenic |
| ATCAGGTGGTTTCAGCCAGC+AGG | 0.484565 | 7.2:+87095939 | MS.gene043239:CDS |
| CCAGAACCGTAACTGCTCCT+TGG | 0.490935 | 7.2:-87096126 | None:intergenic |
| AGTCCTTTCTTTAGAATCAT+CGG | 0.492156 | 7.2:-87092927 | None:intergenic |
| GTTGTGTCAGACCTGGATAT+AGG | 0.492547 | 7.2:-87089963 | None:intergenic |
| GCCCAGGCTTGAGGGTAGGT+TGG | 0.492941 | 7.2:-87096387 | None:intergenic |
| TAGCCTGTCAAGTCATCATC+AGG | 0.494848 | 7.2:+87095922 | MS.gene043239:intron |
| ATCCAACCTACCCTCAAGCC+TGG | 0.495983 | 7.2:+87096385 | MS.gene043239:CDS |
| CTCCAGCACAATCATATCTC+AGG | 0.497449 | 7.2:+87096913 | MS.gene043239:CDS |
| AGGGCGGCCCCTGCAAACTC+TGG | 0.497694 | 7.2:-87096167 | None:intergenic |
| GTATCTAACCTCTGCACTCA+TGG | 0.499696 | 7.2:-87091811 | None:intergenic |
| CGCCTGGTTGAGTGGCTCTA+GGG | 0.500281 | 7.2:-87096503 | None:intergenic |
| TGTTGAGGATAATTTCCATA+AGG | 0.501436 | 7.2:-87096096 | None:intergenic |
| GATCCCACAATAGCCTGAGC+AGG | 0.502943 | 7.2:-87092080 | None:intergenic |
| TCCAAGTTACTGGTGATAAG+AGG | 0.505553 | 7.2:+87092951 | MS.gene043239:CDS |
| TCTACTCCAGCACAATCATA+TGG | 0.505828 | 7.2:+87096543 | MS.gene043239:CDS |
| GCCTGGTTGAGTGGCTCTAG+GGG | 0.506058 | 7.2:-87096625 | None:intergenic |
| GCCTGGTTGAGTGGCTCTAG+GGG | 0.506058 | 7.2:-87096748 | None:intergenic |
| GCCTGGTTGAGTGGCTCTAG+GGG | 0.506058 | 7.2:-87096868 | None:intergenic |
| GCCTGGTTGAGTGGCTCTAG+GGG | 0.506058 | 7.2:-87096991 | None:intergenic |
| CTTATGGAGGGTAAAGGATA+AGG | 0.506258 | 7.2:-87096294 | None:intergenic |
| TTTGCTTGAGCCCAGGCTTG+AGG | 0.508013 | 7.2:-87096396 | None:intergenic |
| GGTTCTACTCCAGCACCATA+TGG | 0.508243 | 7.2:+87096786 | MS.gene043239:CDS |
| CCATGATACGGAATCTCGCC+TGG | 0.509473 | 7.2:-87096765 | None:intergenic |
| CCATGATACGGAATCTCGCC+TGG | 0.509473 | 7.2:-87096885 | None:intergenic |
| AGACAAGGCAGAAAAGCTAT+TGG | 0.511880 | 7.2:+87091785 | MS.gene043239:CDS |
| TGTACTCCAGCACAATCATA+TGG | 0.513671 | 7.2:+87096666 | MS.gene043239:CDS |
| ATGGCTCCAAGGAGCAGTTA+CGG | 0.518058 | 7.2:+87096120 | MS.gene043239:CDS |
| AACAATGGTGGCCTGCCATA+TGG | 0.518454 | 7.2:-87096801 | None:intergenic |
| TGTGGATGCTGCCCTTGTGA+AGG | 0.518910 | 7.2:-87096468 | None:intergenic |
| CCAGGCGAGATTCCGTATCA+TGG | 0.519439 | 7.2:+87096765 | MS.gene043239:CDS |
| CCAGGCGAGATTCCGTATCA+TGG | 0.519439 | 7.2:+87096885 | MS.gene043239:CDS |
| TGTGGTTGTTGTGTCAGACC+TGG | 0.519580 | 7.2:-87089970 | None:intergenic |
| CCATGATACGGAATCTCGCC+TGG | 0.519692 | 7.2:-87096642 | None:intergenic |
| CATATTACTATCAGCATCGC+TGG | 0.520981 | 7.2:+87096037 | MS.gene043239:CDS |
| TAACAGACATGATGAAAAGA+AGG | 0.521017 | 7.2:+87089749 | MS.gene043239:CDS |
| AGGCCTCGAGCTACAAGTGC+AGG | 0.522201 | 7.2:-87092053 | None:intergenic |
| GAAGTATCATGCTGAAAGGT+GGG | 0.522280 | 7.2:-87089924 | None:intergenic |
| CGGAATCTCGCCTGGTTGAG+TGG | 0.522392 | 7.2:-87096511 | None:intergenic |
| CGGAATCTCGCCTGGTTGAG+TGG | 0.522392 | 7.2:-87096634 | None:intergenic |
| CGGAATCTCGCCTGGTTGAG+TGG | 0.522392 | 7.2:-87096757 | None:intergenic |
| CGGAATCTCGCCTGGTTGAG+TGG | 0.522392 | 7.2:-87096877 | None:intergenic |
| CGGAATCTCGCCTGGTTGAG+TGG | 0.522392 | 7.2:-87097000 | None:intergenic |
| CACCCTAGAGCCACTCAACC+AGG | 0.523349 | 7.2:+87096501 | MS.gene043239:CDS |
| GATAAGGACCGGTACAGTGT+TGG | 0.525106 | 7.2:-87096278 | None:intergenic |
| GGATGTTGTCCTTGTGAAGG+TGG | 0.528344 | 7.2:-87096588 | None:intergenic |
| GGATGTTGTCCTTGTGAAGG+TGG | 0.528344 | 7.2:-87096711 | None:intergenic |
| GGATGTTGTCCTTGTGAAGG+TGG | 0.528344 | 7.2:-87096831 | None:intergenic |
| GGATGTTGTCCTTGTGAAGG+TGG | 0.528344 | 7.2:-87096954 | None:intergenic |
| CCACCTGATGATGACTTGAC+AGG | 0.529512 | 7.2:-87095925 | None:intergenic |
| GATGTACATACCTTATTGCT+AGG | 0.530908 | 7.2:-87090008 | None:intergenic |
| AGGCCTCACCAGAGTTTGCA+GGG | 0.531736 | 7.2:+87096159 | MS.gene043239:CDS |
| CAATAGCCTGAGCAGGGGAG+AGG | 0.532008 | 7.2:-87092073 | None:intergenic |
| TAGGTTGGATGTCCTCCATA+TGG | 0.532711 | 7.2:-87096372 | None:intergenic |
| GGTGGCCTGCCATATGGTGC+TGG | 0.532857 | 7.2:-87096795 | None:intergenic |
| ACGGTTCTGGTTGGGAGCAA+AGG | 0.533493 | 7.2:+87096139 | MS.gene043239:CDS |
| GACAAAAGCAACCTATATCC+AGG | 0.533532 | 7.2:+87089952 | MS.gene043239:CDS |
| GGATGCTGCCCTTGTGAAGG+TGG | 0.534828 | 7.2:-87096465 | None:intergenic |
| TAATTAATCTGAACAGGGGA+TGG | 0.535256 | 7.2:-87096318 | None:intergenic |
| CCAGGCGAGATTCCGTATCA+TGG | 0.541393 | 7.2:+87096642 | MS.gene043239:CDS |
| TTGAGCCCAGGCTTGAGGGT+AGG | 0.542149 | 7.2:-87096391 | None:intergenic |
| CTACTCCAGCACCATATGGC+AGG | 0.542173 | 7.2:+87096790 | MS.gene043239:CDS |
| AGGAACCTCAATTTCTTGTG+TGG | 0.543235 | 7.2:-87089988 | None:intergenic |
| CTCCATATGGATATTGTGCA+GGG | 0.544808 | 7.2:-87096359 | None:intergenic |
| GGCCTGCCATATGATTGTGC+TGG | 0.545310 | 7.2:-87096549 | None:intergenic |
| GGCCTGCCATATGATTGTGC+TGG | 0.545310 | 7.2:-87096672 | None:intergenic |
| AAGCCGATGATTCTAAAGAA+AGG | 0.546417 | 7.2:+87092924 | MS.gene043239:CDS |
| CTCCAGCACAATCATATGGC+AGG | 0.546666 | 7.2:+87096670 | MS.gene043239:CDS |
| CTCCAGCACAATCATATGGC+AGG | 0.547509 | 7.2:+87096547 | MS.gene043239:CDS |
| AGATCCTTGTGGCGGACGGT+AGG | 0.547916 | 7.2:-87095962 | None:intergenic |
| AGAATCTCTTTGGTATTGGT+AGG | 0.550145 | 7.2:-87089849 | None:intergenic |
| TGCATATGATTGATTATGAG+AGG | 0.551522 | 7.2:-87096067 | None:intergenic |
| AACAACCACACAAGAAATTG+AGG | 0.552466 | 7.2:+87089983 | MS.gene043239:CDS |
| GGCTTTCCATACTGCTGTGG+AGG | 0.552499 | 7.2:-87096426 | None:intergenic |
| TAAGGACCGGTACAGTGTTG+GGG | 0.552946 | 7.2:-87096276 | None:intergenic |
| TTCACAAGGGCAGCATCCAC+AGG | 0.553792 | 7.2:+87096470 | MS.gene043239:CDS |
| GTATCTAACCTCTGTGAACA+TGG | 0.556597 | 7.2:-87091436 | None:intergenic |
| AGAAGTATCATGCTGAAAGG+TGG | 0.557514 | 7.2:-87089925 | None:intergenic |
| GGAGCAGTTACGGTTCTGGT+TGG | 0.559653 | 7.2:+87096130 | MS.gene043239:CDS |
| CCTGGTTGAGTGGCTCTAGG+GGG | 0.559737 | 7.2:-87096747 | None:intergenic |
| CAGGCCTACCGTCCGCCACA+AGG | 0.560264 | 7.2:+87095958 | MS.gene043239:CDS |
| TCTGGATGTTGTCCTTGTGA+AGG | 0.560326 | 7.2:-87096957 | None:intergenic |
| TCCAACCTACCCTCAAGCCT+GGG | 0.561080 | 7.2:+87096386 | MS.gene043239:CDS |
| CCTGGTTGAGTGGCTCTAGG+GGG | 0.564374 | 7.2:-87096624 | None:intergenic |
| CCTGGTTGAGTGGCTCTAGG+GGG | 0.564374 | 7.2:-87096867 | None:intergenic |
| CCTGGTTGAGTGGCTCTAGG+GGG | 0.564374 | 7.2:-87096990 | None:intergenic |
| GGCCTGAGATATGATTGTGC+TGG | 0.566446 | 7.2:-87096915 | None:intergenic |
| CTCCAGCACAATCACATGGC+AGG | 0.569765 | 7.2:+87097036 | MS.gene043239:CDS |
| GGATGTTGTCCTTGTGAAGG+TGG | 0.573281 | 7.2:-87097077 | None:intergenic |
| CTCCTTGGAGCCATATGTTG+AGG | 0.573692 | 7.2:-87096111 | None:intergenic |
| AAAGGTGGGATCATTCGAGC+TGG | 0.574288 | 7.2:-87089910 | None:intergenic |
| GGACAACATCCAGAGTCCTA+TGG | 0.576552 | 7.2:+87096966 | MS.gene043239:CDS |
| CTGGTTGAGTGGCTCTAGGG+GGG | 0.579347 | 7.2:-87096746 | None:intergenic |
| GAGGCAAATTGAAATTGCAC+AGG | 0.580541 | 7.2:+87092970 | MS.gene043239:CDS |
| GGCCCCTGCAAACTCTGGTG+AGG | 0.583174 | 7.2:-87096162 | None:intergenic |
| ATGATCATTATGGTGGACAA+AGG | 0.586741 | 7.2:+87096205 | MS.gene043239:CDS |
| GGATAATTTCCATAAGGAGT+AGG | 0.588588 | 7.2:-87096090 | None:intergenic |
| TCTGGATGTTGTCCTTGTGA+AGG | 0.589660 | 7.2:-87096591 | None:intergenic |
| TCTGGATGTTGTCCTTGTGA+AGG | 0.589660 | 7.2:-87096714 | None:intergenic |
| TCTGGATGTTGTCCTTGTGA+AGG | 0.589660 | 7.2:-87096834 | None:intergenic |
| GATGGACTTATGGAGGGTAA+AGG | 0.592593 | 7.2:-87096300 | None:intergenic |
| CACCAGATCCTTGTGGCGGA+CGG | 0.592623 | 7.2:-87095966 | None:intergenic |
| ATCCCACAATAGCCTGAGCA+GGG | 0.592936 | 7.2:-87092079 | None:intergenic |
| AACAGGGGATGGACTTATGG+AGG | 0.593055 | 7.2:-87096307 | None:intergenic |
| CTGGTTGAGTGGCTCTAGGG+GGG | 0.596393 | 7.2:-87096623 | None:intergenic |
| CTGGTTGAGTGGCTCTAGGG+GGG | 0.596393 | 7.2:-87096866 | None:intergenic |
| CTGGTTGAGTGGCTCTAGGG+GGG | 0.596393 | 7.2:-87096989 | None:intergenic |
| GAACTTGCGCTTACAATCAG+AGG | 0.601991 | 7.2:-87089164 | None:intergenic |
| ATCCTCAACATATGGCTCCA+AGG | 0.603445 | 7.2:+87096109 | MS.gene043239:CDS |
| GGTGGCTTTCCATACTGCTG+TGG | 0.604041 | 7.2:-87096429 | None:intergenic |
| TACCAAAGAGATTCTCGTTG+AGG | 0.605338 | 7.2:+87089857 | MS.gene043239:CDS |
| AGTCAAACAAACCTGACTCA+AGG | 0.609370 | 7.2:-87093008 | None:intergenic |
| CCAGGCGAGATTCCGTATCA+GGG | 0.609811 | 7.2:+87096519 | MS.gene043239:CDS |
| CCAGGCGAGATTCCGTATCA+GGG | 0.609811 | 7.2:+87097008 | MS.gene043239:CDS |
| TTTGGCATGCCACCTTCACA+AGG | 0.611493 | 7.2:+87096579 | MS.gene043239:CDS |
| TTTGGCATGCCACCTTCACA+AGG | 0.611493 | 7.2:+87096702 | MS.gene043239:CDS |
| TTTGGCATGCCACCTTCACA+AGG | 0.611493 | 7.2:+87096822 | MS.gene043239:CDS |
| TTTGGCATGCCACCTTCACA+AGG | 0.611493 | 7.2:+87096945 | MS.gene043239:CDS |
| CCACCACTATGGGGTCAGCA+AGG | 0.612728 | 7.2:+87095991 | MS.gene043239:CDS |
| TATGGCGTGCCACCTTCACA+AGG | 0.616928 | 7.2:+87096456 | MS.gene043239:CDS |
| CGATGCTGATAGTAATATGA+TGG | 0.617010 | 7.2:-87096033 | None:intergenic |
| TCGGCTTCGGGAAGATGTTG+AGG | 0.617094 | 7.2:-87092908 | None:intergenic |
| TAACCCCTGTTGTGTGAGGG+CGG | 0.617324 | 7.2:-87096183 | None:intergenic |
| CTGGTTGAGTGGCTCTAGGG+TGG | 0.617348 | 7.2:-87096500 | None:intergenic |
| AAGGACCGGTACAGTGTTGG+GGG | 0.617380 | 7.2:-87096275 | None:intergenic |
| AGAAGAAGTATCATGCTGAA+AGG | 0.621992 | 7.2:-87089928 | None:intergenic |
| GGGGCCGCCCTCACACAACA+GGG | 0.626489 | 7.2:+87096179 | MS.gene043239:CDS |
| GGAGGGTAAAGGATAAGGAC+CGG | 0.627635 | 7.2:-87096289 | None:intergenic |
| AGGGGTTATGATCATTATGG+TGG | 0.627740 | 7.2:+87096198 | MS.gene043239:CDS |
| TGCTGATAGTAATATGATGG+TGG | 0.628397 | 7.2:-87096030 | None:intergenic |
| GAAGATCAACACTCTGATGA+CGG | 0.628431 | 7.2:+87089187 | MS.gene043239:CDS |
| ACGTGAAGTTCCAAATGAGA+AGG | 0.630318 | 7.2:+87091554 | MS.gene043239:CDS |
| GCTGGAGTAGAACCCTGATA+CGG | 0.630359 | 7.2:-87096531 | None:intergenic |
| GCTGGAGTAGAACCCTGATA+CGG | 0.630359 | 7.2:-87097020 | None:intergenic |
| AATTGTAATTAATCTGAACA+GGG | 0.630538 | 7.2:-87096323 | None:intergenic |
| CCATATGGATATTGTGCAGG+GGG | 0.630768 | 7.2:-87096357 | None:intergenic |
| GATGATAACCAGAATTACCT+AGG | 0.632946 | 7.2:+87089235 | MS.gene043239:CDS |
| AACTTGCGCTTACAATCAGA+GGG | 0.633621 | 7.2:-87089163 | None:intergenic |
| GCTGGAGTAGAACCATGATA+CGG | 0.633938 | 7.2:-87096777 | None:intergenic |
| AAAGAAGGTTGCTGAGCCAG+AGG | 0.634204 | 7.2:+87089764 | MS.gene043239:CDS |
| GCATATGATTGATTATGAGA+GGG | 0.634444 | 7.2:-87096066 | None:intergenic |
| CTGGTTGAGTGGCTCTAGGG+TGG | 0.634984 | 7.2:-87097113 | None:intergenic |
| GAACCTTGCTGACCCCATAG+TGG | 0.636422 | 7.2:-87095994 | None:intergenic |
| CGTCCGCCACAAGGATCTGG+TGG | 0.637608 | 7.2:+87095967 | MS.gene043239:CDS |
| GCTGGAGTACAACCATGATA+CGG | 0.638390 | 7.2:-87096654 | None:intergenic |
| ATTCCACAGGCTGATGCTGG+AGG | 0.639608 | 7.2:+87092026 | MS.gene043239:intron |
| GATCATTATGGTGGACAAAG+GGG | 0.641676 | 7.2:+87096207 | MS.gene043239:CDS |
| GGTGGCACGCCATACAATGG+TGG | 0.642515 | 7.2:-87097059 | None:intergenic |
| TCTCCTGCACTTGTAGCTCG+AGG | 0.645902 | 7.2:+87092050 | MS.gene043239:CDS |
| ATCATAACCCCTGTTGTGTG+AGG | 0.648263 | 7.2:-87096187 | None:intergenic |
| GCTGGAGTAGAACCATGATA+CGG | 0.649951 | 7.2:-87096897 | None:intergenic |
| GGACCACCAGATCCTTGTGG+CGG | 0.656693 | 7.2:-87095970 | None:intergenic |
| TGGTTATCATCGTCAAGACA+AGG | 0.656873 | 7.2:-87089223 | None:intergenic |
| GGTGGCACGCCATACAATGG+TGG | 0.659754 | 7.2:-87096447 | None:intergenic |
| TATGGCGTGCCACCTTCACA+AGG | 0.660463 | 7.2:+87097068 | MS.gene043239:CDS |
| CTAGGGTGGACATAAGCCTG+TGG | 0.661544 | 7.2:-87096486 | None:intergenic |
| GACAACATCCAGTCTTATGG+CGG | 0.662824 | 7.2:+87097090 | MS.gene043239:CDS |
| AATTGCACAGGAAATGACAA+AGG | 0.663160 | 7.2:+87092982 | MS.gene043239:CDS |
| TCCCACAATAGCCTGAGCAG+GGG | 0.667257 | 7.2:-87092078 | None:intergenic |
| GGCCTCACCAGAGTTTGCAG+GGG | 0.668815 | 7.2:+87096160 | MS.gene043239:CDS |
| TCATAACCCCTGTTGTGTGA+GGG | 0.668905 | 7.2:-87096186 | None:intergenic |
| TCCATATGGATATTGTGCAG+GGG | 0.669519 | 7.2:-87096358 | None:intergenic |
| AGAGGAAAATGCTCATTCGG+AGG | 0.674893 | 7.2:+87089782 | MS.gene043239:CDS |
| ACTGGATGTTGTCCTTGTGA+AGG | 0.675212 | 7.2:-87097080 | None:intergenic |
| CCTGCACAATATCCATATGG+AGG | 0.675215 | 7.2:+87096360 | MS.gene043239:CDS |
| GCTGATAGTAATATGATGGT+GGG | 0.679017 | 7.2:-87096029 | None:intergenic |
| ATTGTAATTAATCTGAACAG+GGG | 0.679692 | 7.2:-87096322 | None:intergenic |
| TCTACTCCAGCACAATCACA+TGG | 0.682255 | 7.2:+87097032 | MS.gene043239:CDS |
| CCTTGCTGACCCCATAGTGG+TGG | 0.683281 | 7.2:-87095991 | None:intergenic |
| ATTGGATGCCATGAGTGCAG+AGG | 0.684700 | 7.2:+87091803 | MS.gene043239:CDS |
| CCTGTCAAGTCATCATCAGG+TGG | 0.685141 | 7.2:+87095925 | MS.gene043239:CDS |
| GGGCCGCCCTCACACAACAG+GGG | 0.685494 | 7.2:+87096180 | MS.gene043239:CDS |
| GAAGGTGGCACGCCATACAA+TGG | 0.687612 | 7.2:-87096450 | None:intergenic |
| GAAGGTGGCACGCCATACAA+TGG | 0.687612 | 7.2:-87097062 | None:intergenic |
| GGTGGACCACCAGATCCTTG+TGG | 0.688140 | 7.2:-87095973 | None:intergenic |
| TCTGGTGGTCCACCACTATG+GGG | 0.696904 | 7.2:+87095982 | MS.gene043239:CDS |
| GGTGGCATGCCAAACAATGG+TGG | 0.699630 | 7.2:-87096570 | None:intergenic |
| GGTGGCATGCCAAACAATGG+TGG | 0.699630 | 7.2:-87096693 | None:intergenic |
| GGTGGCATGCCAAACAATGG+TGG | 0.699630 | 7.2:-87096813 | None:intergenic |
| GGTGGCATGCCAAACAATGG+TGG | 0.699630 | 7.2:-87096936 | None:intergenic |
| ACAGGGGATGGACTTATGGA+GGG | 0.703309 | 7.2:-87096306 | None:intergenic |
| GAAGGTGGCATGCCAAACAA+TGG | 0.715515 | 7.2:-87096573 | None:intergenic |
| GAAGGTGGCATGCCAAACAA+TGG | 0.715515 | 7.2:-87096696 | None:intergenic |
| GAAGGTGGCATGCCAAACAA+TGG | 0.715515 | 7.2:-87096816 | None:intergenic |
| GAAGGTGGCATGCCAAACAA+TGG | 0.715515 | 7.2:-87096939 | None:intergenic |
| GATAGTAATATGATGGTGGG+TGG | 0.723828 | 7.2:-87096026 | None:intergenic |
| ATGGCGTGCCACCTTCACAA+GGG | 0.726964 | 7.2:+87096457 | MS.gene043239:CDS |
| AATGGATGCCATGTTCACAG+AGG | 0.777271 | 7.2:+87091428 | MS.gene043239:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 87089124 | 87097121 | 87089124 | ID=MS.gene043239 |
| chr7.2 | mRNA | 87089124 | 87097121 | 87089124 | ID=MS.gene043239.t1;Parent=MS.gene043239 |
| chr7.2 | exon | 87089124 | 87089256 | 87089124 | ID=MS.gene043239.t1.exon1;Parent=MS.gene043239.t1 |
| chr7.2 | CDS | 87089124 | 87089256 | 87089124 | ID=cds.MS.gene043239.t1;Parent=MS.gene043239.t1 |
| chr7.2 | exon | 87089742 | 87090019 | 87089742 | ID=MS.gene043239.t1.exon2;Parent=MS.gene043239.t1 |
| chr7.2 | CDS | 87089742 | 87090019 | 87089742 | ID=cds.MS.gene043239.t1;Parent=MS.gene043239.t1 |
| chr7.2 | exon | 87091378 | 87091449 | 87091378 | ID=MS.gene043239.t1.exon3;Parent=MS.gene043239.t1 |
| chr7.2 | CDS | 87091378 | 87091449 | 87091378 | ID=cds.MS.gene043239.t1;Parent=MS.gene043239.t1 |
| chr7.2 | exon | 87091531 | 87091575 | 87091531 | ID=MS.gene043239.t1.exon4;Parent=MS.gene043239.t1 |
| chr7.2 | CDS | 87091531 | 87091575 | 87091531 | ID=cds.MS.gene043239.t1;Parent=MS.gene043239.t1 |
| chr7.2 | exon | 87091753 | 87091824 | 87091753 | ID=MS.gene043239.t1.exon5;Parent=MS.gene043239.t1 |
| chr7.2 | CDS | 87091753 | 87091824 | 87091753 | ID=cds.MS.gene043239.t1;Parent=MS.gene043239.t1 |
| chr7.2 | exon | 87092035 | 87092136 | 87092035 | ID=MS.gene043239.t1.exon6;Parent=MS.gene043239.t1 |
| chr7.2 | CDS | 87092035 | 87092136 | 87092035 | ID=cds.MS.gene043239.t1;Parent=MS.gene043239.t1 |
| chr7.2 | exon | 87092902 | 87093018 | 87092902 | ID=MS.gene043239.t1.exon7;Parent=MS.gene043239.t1 |
| chr7.2 | CDS | 87092902 | 87093018 | 87092902 | ID=cds.MS.gene043239.t1;Parent=MS.gene043239.t1 |
| chr7.2 | exon | 87095925 | 87097121 | 87095925 | ID=MS.gene043239.t1.exon8;Parent=MS.gene043239.t1 |
| chr7.2 | CDS | 87095925 | 87097121 | 87095925 | ID=cds.MS.gene043239.t1;Parent=MS.gene043239.t1 |
| Gene Sequence |
| Protein sequence |