Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53118.t1 | XP_003613959.1 | 99.2 | 240 | 2 | 0 | 1 | 240 | 1 | 240 | 3.10E-129 | 471.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53118.t1 | Q7KWX9 | 44.7 | 215 | 114 | 3 | 14 | 227 | 6 | 216 | 2.6e-44 | 180.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53118.t1 | B7FLI0 | 99.2 | 240 | 2 | 0 | 1 | 240 | 1 | 240 | 2.2e-129 | 471.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene53118 | MS.gene31317 | PPI |
| MS.gene42834 | MS.gene53118 | PPI |
| MS.gene024471 | MS.gene53118 | PPI |
| MS.gene91519 | MS.gene53118 | PPI |
| MS.gene53118 | MS.gene22316 | PPI |
| MS.gene78555 | MS.gene53118 | PPI |
| MS.gene058147 | MS.gene53118 | PPI |
| MS.gene55323 | MS.gene53118 | PPI |
| MS.gene21656 | MS.gene53118 | PPI |
| MS.gene53118 | MS.gene041852 | PPI |
| MS.gene023858 | MS.gene53118 | PPI |
| MS.gene043239 | MS.gene53118 | PPI |
| MS.gene21912 | MS.gene53118 | PPI |
| MS.gene53118 | MS.gene021698 | PPI |
| MS.gene21710 | MS.gene53118 | PPI |
| MS.gene050621 | MS.gene53118 | PPI |
| MS.gene043576 | MS.gene53118 | PPI |
| MS.gene52227 | MS.gene53118 | PPI |
| MS.gene27712 | MS.gene53118 | PPI |
| MS.gene024674 | MS.gene53118 | PPI |
| MS.gene024734 | MS.gene53118 | PPI |
| MS.gene025936 | MS.gene53118 | PPI |
| MS.gene072735 | MS.gene53118 | PPI |
| MS.gene79599 | MS.gene53118 | PPI |
| MS.gene22822 | MS.gene53118 | PPI |
| MS.gene85900 | MS.gene53118 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53118.t1 | MTR_5g043110 | 99.167 | 240 | 2 | 0 | 1 | 240 | 1 | 240 | 4.57e-178 | 488 |
| MS.gene53118.t1 | MTR_5g009430 | 90.909 | 121 | 11 | 0 | 120 | 240 | 22 | 142 | 3.79e-76 | 227 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53118.t1 | AT4G32175 | 72.458 | 236 | 65 | 0 | 1 | 236 | 1 | 236 | 4.32e-127 | 360 |
| MS.gene53118.t1 | AT2G25355 | 70.711 | 239 | 70 | 0 | 1 | 239 | 1 | 239 | 1.54e-126 | 358 |
| MS.gene53118.t1 | AT2G25355 | 72.986 | 211 | 57 | 0 | 29 | 239 | 1 | 211 | 1.15e-115 | 330 |
Find 63 sgRNAs with CRISPR-Local
Find 357 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCCTGTACTTGATACTTT+AGG | 0.243843 | 5.4:+32229059 | MS.gene53118:CDS |
| CATGCAGAGGATTCAGTTCT+TGG | 0.279048 | 5.4:+32226271 | MS.gene53118:CDS |
| GTCCTGTACTTGATACTTTA+GGG | 0.284685 | 5.4:+32229060 | MS.gene53118:CDS |
| TCTCCAAGCCTAATAAATAC+TGG | 0.308371 | 5.4:+32225563 | MS.gene53118:CDS |
| CTTTCAACCCAGTATTTATT+AGG | 0.326945 | 5.4:-32225571 | None:intergenic |
| AGTGGGAAAGCTGGAGAGTT+TGG | 0.365780 | 5.4:+32228883 | MS.gene53118:CDS |
| AACCCAGTATTTATTAGGCT+TGG | 0.381536 | 5.4:-32225566 | None:intergenic |
| CGCCTCCAAGCTTAATAGTC+TGG | 0.381633 | 5.4:-32224468 | None:intergenic |
| AAACTTTCTTACATCTGATC+TGG | 0.396631 | 5.4:-32226308 | None:intergenic |
| CTACCGGTGCTTGCATTTGA+AGG | 0.400781 | 5.4:+32227395 | MS.gene53118:CDS |
| GAGATAGCTGTTGGCTTGAA+TGG | 0.403935 | 5.4:+32229098 | MS.gene53118:CDS |
| TTGGCTTGAATGGACGTGTT+TGG | 0.414554 | 5.4:+32229108 | MS.gene53118:CDS |
| CCTGAGCTGTCTTGCACTGA+TGG | 0.416004 | 5.4:+32228717 | MS.gene53118:CDS |
| TTTATGCACACCTCAAACTT+AGG | 0.416349 | 5.4:-32227437 | None:intergenic |
| TATATGTTTGAGTGTTCAAC+TGG | 0.417882 | 5.4:+32228922 | MS.gene53118:CDS |
| GACAGCTCAGGATTCATTCC+AGG | 0.419077 | 5.4:-32228705 | None:intergenic |
| AAGAAATATACCTAAGTTTG+AGG | 0.419667 | 5.4:+32227427 | MS.gene53118:CDS |
| TGGCTTGAATGGACGTGTTT+GGG | 0.428587 | 5.4:+32229109 | MS.gene53118:CDS |
| TTAAGCTTGGAGGCGGTCTT+CGG | 0.439165 | 5.4:+32224476 | MS.gene53118:CDS |
| TAATGAAGGCTGGAAGGCTT+AGG | 0.469724 | 5.4:+32225539 | MS.gene53118:CDS |
| AAATTTCGTAGATCAATTAG+TGG | 0.470821 | 5.4:+32224315 | MS.gene53118:CDS |
| GCTACGATGATAGTTGTAGA+TGG | 0.480268 | 5.4:-32229284 | None:intergenic |
| GCTTGGAGGCGGTCTTCGGC+AGG | 0.489590 | 5.4:+32224480 | MS.gene53118:CDS |
| TGTTTAGCCAGTGGGAAAGC+TGG | 0.496155 | 5.4:+32228874 | MS.gene53118:intron |
| CTCCAAGCCTAATAAATACT+GGG | 0.501954 | 5.4:+32225564 | MS.gene53118:CDS |
| TTCCCTAAAGTATCAAGTAC+AGG | 0.507293 | 5.4:-32229062 | None:intergenic |
| AGGTCAAGAACCACATCGCC+AGG | 0.509218 | 5.4:-32224430 | None:intergenic |
| TGGTGTCCAACAGAAAATAA+TGG | 0.517813 | 5.4:+32229337 | MS.gene53118:CDS |
| ACCTACTTTAGCATTTCTAC+CGG | 0.519125 | 5.4:+32227379 | MS.gene53118:CDS |
| CTCTCGTTCGAGATAGCTGT+TGG | 0.520750 | 5.4:+32229089 | MS.gene53118:CDS |
| GTGATTTCTGTAATGAAGGC+TGG | 0.521605 | 5.4:+32225529 | MS.gene53118:CDS |
| AGTGTTCAACTGGTCTCTCA+AGG | 0.524837 | 5.4:+32228932 | MS.gene53118:CDS |
| TGGTGCTTTGCTTTATGTGC+GGG | 0.527438 | 5.4:+32228668 | MS.gene53118:CDS |
| CGGGTTGTTAAAGCAATCCC+TGG | 0.528699 | 5.4:+32228687 | MS.gene53118:CDS |
| CCATCAGTGCAAGACAGCTC+AGG | 0.529608 | 5.4:-32228717 | None:intergenic |
| GAGTTTGGTGCCCTAAAAGA+AGG | 0.530680 | 5.4:+32228898 | MS.gene53118:CDS |
| GGCTGAAAAGCTGCTGCAGA+GGG | 0.532622 | 5.4:+32229358 | MS.gene53118:CDS |
| AACCAGACTATTAAGCTTGG+AGG | 0.540367 | 5.4:+32224466 | MS.gene53118:CDS |
| TGTTATGGTGTTTAGCCAGT+GGG | 0.543275 | 5.4:+32228866 | MS.gene53118:intron |
| ACAAACCAGACTATTAAGCT+TGG | 0.554569 | 5.4:+32224463 | MS.gene53118:CDS |
| GGGTTGAAAGTTCTCAAAAG+AGG | 0.554866 | 5.4:+32225584 | MS.gene53118:CDS |
| CTTAATAGTCTGGTTTGTCA+TGG | 0.554995 | 5.4:-32224458 | None:intergenic |
| GAAATGGAAAGTAAATCTGC+TGG | 0.563734 | 5.4:+32224283 | None:intergenic |
| AGTATCAAGTACAGGACATG+TGG | 0.572780 | 5.4:-32229054 | None:intergenic |
| ACAGCTCAGGATTCATTCCA+GGG | 0.572903 | 5.4:-32228704 | None:intergenic |
| TGATGTGATTTCTGTAATGA+AGG | 0.589317 | 5.4:+32225525 | MS.gene53118:CDS |
| TGGCTGAAAAGCTGCTGCAG+AGG | 0.589536 | 5.4:+32229357 | MS.gene53118:CDS |
| CCTCCTTCAAATGCAAGCAC+CGG | 0.589684 | 5.4:-32227398 | None:intergenic |
| AAACTCTCCAGCTTTCCCAC+TGG | 0.590205 | 5.4:-32228881 | None:intergenic |
| GGTTGAAAGTTCTCAAAAGA+GGG | 0.594216 | 5.4:+32225585 | MS.gene53118:CDS |
| TTTCTGTAATGAAGGCTGGA+AGG | 0.595028 | 5.4:+32225533 | MS.gene53118:CDS |
| ACAGTATGTGCCGCATGCAG+AGG | 0.603783 | 5.4:+32226258 | MS.gene53118:intron |
| ACCGGTAGAAATGCTAAAGT+AGG | 0.604930 | 5.4:-32227380 | None:intergenic |
| GATAGTTGTAGATGGAGATG+AGG | 0.610158 | 5.4:-32229276 | None:intergenic |
| TTGGTGCTTTGCTTTATGTG+CGG | 0.616378 | 5.4:+32228667 | MS.gene53118:CDS |
| CCGGTGCTTGCATTTGAAGG+AGG | 0.619754 | 5.4:+32227398 | MS.gene53118:CDS |
| CAGACTATTAAGCTTGGAGG+CGG | 0.619906 | 5.4:+32224469 | MS.gene53118:CDS |
| TCTGGTTTGTCATGGTAGAG+AGG | 0.621859 | 5.4:-32224450 | None:intergenic |
| TTGATCTACGAAATTTGTAG+CGG | 0.645286 | 5.4:-32224308 | None:intergenic |
| GTATCAAGTACAGGACATGT+GGG | 0.672926 | 5.4:-32229053 | None:intergenic |
| ATAAACTCAGAGGTATTGAG+TGG | 0.675537 | 5.4:+32229317 | MS.gene53118:CDS |
| TAATGCACTTATAAACTCAG+AGG | 0.703003 | 5.4:+32229307 | MS.gene53118:CDS |
| AGAACTGAATCCTCTGCATG+CGG | 0.725568 | 5.4:-32226268 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTATCTATTTTATATAAAAA+AGG | - | chr5.4:32227595-32227614 | None:intergenic | 10.0% |
| !! | AAATAAAAATAGTCATGTAT+TGG | - | chr5.4:32226605-32226624 | None:intergenic | 15.0% |
| !! | AACAAAATAAAAGAGATATA+CGG | - | chr5.4:32228292-32228311 | None:intergenic | 15.0% |
| !! | TAATATGAAAAATTACATGA+TGG | - | chr5.4:32229212-32229231 | None:intergenic | 15.0% |
| !!! | TACATGACTATTTTTATTTT+AGG | + | chr5.4:32226606-32226625 | MS.gene53118:intron | 15.0% |
| !!! | TCAGAAATTTGATAATTTTA+GGG | - | chr5.4:32224905-32224924 | None:intergenic | 15.0% |
| !!! | TTCAGAAATTTGATAATTTT+AGG | - | chr5.4:32224906-32224925 | None:intergenic | 15.0% |
| !!! | TTTTATTTTGTTTTAAGATG+TGG | + | chr5.4:32228300-32228319 | MS.gene53118:intron | 15.0% |
| !! | AAAAAAGAAATAATGCAACA+TGG | - | chr5.4:32229163-32229182 | None:intergenic | 20.0% |
| !! | AAACTAAAGTCTTCTAATAT+TGG | + | chr5.4:32228450-32228469 | MS.gene53118:intron | 20.0% |
| !! | AAATTCCTTTATATCATGAA+AGG | + | chr5.4:32228777-32228796 | MS.gene53118:intron | 20.0% |
| !! | AACATTATTTAACAGAAACA+AGG | - | chr5.4:32228578-32228597 | None:intergenic | 20.0% |
| !! | ACATTATTTAACAGAAACAA+GGG | - | chr5.4:32228577-32228596 | None:intergenic | 20.0% |
| !! | ACCACTAAAATAAAATGAAA+TGG | + | chr5.4:32228032-32228051 | MS.gene53118:intron | 20.0% |
| !! | AGTTAGATGTATTTGTATTT+GGG | + | chr5.4:32228352-32228371 | MS.gene53118:intron | 20.0% |
| !! | CCACTAAAATAAAATGAAAT+GGG | + | chr5.4:32228033-32228052 | MS.gene53118:intron | 20.0% |
| !! | CTGAAATCTTTAGATTAAAT+AGG | + | chr5.4:32224921-32224940 | MS.gene53118:intron | 20.0% |
| !! | GAGTTTCAACTAATATAATA+GGG | + | chr5.4:32224831-32224850 | MS.gene53118:intron | 20.0% |
| !! | GTTAATAAAATTCATGTTTG+CGG | + | chr5.4:32224396-32224415 | MS.gene53118:intron | 20.0% |
| !! | TCAAAATTTGTCATTATATG+TGG | + | chr5.4:32225902-32225921 | MS.gene53118:intron | 20.0% |
| !! | TCTATTAACTATAAAGTACA+TGG | + | chr5.4:32226410-32226429 | MS.gene53118:intron | 20.0% |
| !! | TGAACATTTAATAGAAAAAC+AGG | - | chr5.4:32226036-32226055 | None:intergenic | 20.0% |
| !! | TGAGTTTCAACTAATATAAT+AGG | + | chr5.4:32224830-32224849 | MS.gene53118:intron | 20.0% |
| !! | TGTTATATGGTTATGTTAAA+AGG | - | chr5.4:32226728-32226747 | None:intergenic | 20.0% |
| !! | TTATGCTTGCAAAAATAAAA+TGG | - | chr5.4:32228831-32228850 | None:intergenic | 20.0% |
| !! | TTGTTAAATGCAATTTGTAT+AGG | + | chr5.4:32226386-32226405 | MS.gene53118:intron | 20.0% |
| !! | TTTCTGTTAAATAATGTTTC+CGG | + | chr5.4:32228580-32228599 | MS.gene53118:intron | 20.0% |
| !!! | AAGACTTTAGTTTAATCAAA+CGG | - | chr5.4:32228443-32228462 | None:intergenic | 20.0% |
| !!! | AATTTTCTTGTGGATATAAA+AGG | + | chr5.4:32227356-32227375 | MS.gene53118:CDS | 20.0% |
| !!! | AGCAACTTTAATTTTTACAA+TGG | - | chr5.4:32225279-32225298 | None:intergenic | 20.0% |
| !!! | AGGATTTCAATTTTGAAATT+AGG | + | chr5.4:32226575-32226594 | MS.gene53118:intron | 20.0% |
| !!! | AGTTTAATCATTTTGTTCTT+AGG | - | chr5.4:32224794-32224813 | None:intergenic | 20.0% |
| !!! | ATGTTTATATGGTGAATTTT+GGG | + | chr5.4:32226852-32226871 | MS.gene53118:intron | 20.0% |
| !!! | ATTATAGTTACTTTGCTTTA+TGG | + | chr5.4:32227678-32227697 | MS.gene53118:intron | 20.0% |
| !!! | CATTATTTCTTTTTTGTTTC+TGG | + | chr5.4:32229168-32229187 | MS.gene53118:intron | 20.0% |
| !!! | CTCATTTTGTAACAATTTTT+AGG | + | chr5.4:32225498-32225517 | MS.gene53118:intron | 20.0% |
| !!! | GGATTTCAATTTTGAAATTA+GGG | + | chr5.4:32226576-32226595 | MS.gene53118:intron | 20.0% |
| !!! | TATGTTTATATGGTGAATTT+TGG | + | chr5.4:32226851-32226870 | MS.gene53118:intron | 20.0% |
| !!! | TGATTTATTAAAAGTATGCA+TGG | - | chr5.4:32228991-32229010 | None:intergenic | 20.0% |
| !!! | TTTTATATGTATTCCTAGAA+TGG | + | chr5.4:32225759-32225778 | MS.gene53118:intron | 20.0% |
| !!! | TTTTCTATTCCTAGATTTTT+AGG | + | chr5.4:32224636-32224655 | MS.gene53118:intron | 20.0% |
| !!! | TTTTGTAACAATTTTTAGGA+TGG | + | chr5.4:32225502-32225521 | MS.gene53118:intron | 20.0% |
| ! | AAAACAGCATAATCAGAATA+TGG | - | chr5.4:32226236-32226255 | None:intergenic | 25.0% |
| ! | AAAACTATAGTTATGAGGAA+GGG | - | chr5.4:32227067-32227086 | None:intergenic | 25.0% |
| ! | AAATTTCGTAGATCAATTAG+TGG | + | chr5.4:32224315-32224334 | MS.gene53118:CDS | 25.0% |
| ! | AAATTTGTCATTATATGTGG+AGG | + | chr5.4:32225905-32225924 | MS.gene53118:intron | 25.0% |
| ! | AAGAAATATACCTAAGTTTG+AGG | + | chr5.4:32227427-32227446 | MS.gene53118:CDS | 25.0% |
| ! | AATCAAAACTTATGTCCATT+TGG | - | chr5.4:32226105-32226124 | None:intergenic | 25.0% |
| ! | ACATAATTCCTTTACATAAG+TGG | + | chr5.4:32225306-32225325 | MS.gene53118:intron | 25.0% |
| ! | ATATTATACAATGTTGTCGA+TGG | - | chr5.4:32226885-32226904 | None:intergenic | 25.0% |
| ! | CAATATTCATAAATTTCCTG+TGG | - | chr5.4:32226800-32226819 | None:intergenic | 25.0% |
| ! | CACTTCATACATATATATTC+AGG | + | chr5.4:32226066-32226085 | MS.gene53118:intron | 25.0% |
| ! | CAGTTAGATGTATTTGTATT+TGG | + | chr5.4:32228351-32228370 | MS.gene53118:intron | 25.0% |
| ! | CTTATGTAAAGGAATTATGT+AGG | - | chr5.4:32225306-32225325 | None:intergenic | 25.0% |
| ! | GAAAACCTTTCATGATATAA+AGG | - | chr5.4:32228785-32228804 | None:intergenic | 25.0% |
| ! | GAATAATATCCCAAAATCAA+TGG | + | chr5.4:32225846-32225865 | MS.gene53118:intron | 25.0% |
| ! | GGGTTATATTATTTGATGTT+TGG | + | chr5.4:32226669-32226688 | MS.gene53118:intron | 25.0% |
| ! | TAAGTTTGACCATAAACAAA+AGG | + | chr5.4:32224986-32225005 | MS.gene53118:intron | 25.0% |
| ! | TAGACAAAACTATAGTTATG+AGG | - | chr5.4:32227072-32227091 | None:intergenic | 25.0% |
| ! | TATAAAATAGATACCTGTCT+AGG | + | chr5.4:32227601-32227620 | MS.gene53118:intron | 25.0% |
| ! | TGCATATATTATCAGCTATT+TGG | - | chr5.4:32225718-32225737 | None:intergenic | 25.0% |
| ! | TGTTTGAAAATCATTACTAG+TGG | + | chr5.4:32228083-32228102 | MS.gene53118:intron | 25.0% |
| ! | TTAACAACACTGATGTTATA+TGG | - | chr5.4:32226741-32226760 | None:intergenic | 25.0% |
| ! | TTATTCAATTCTGCTAGTAA+CGG | + | chr5.4:32225472-32225491 | MS.gene53118:intron | 25.0% |
| ! | TTCTGTTAAATAATGTTTCC+GGG | + | chr5.4:32228581-32228600 | MS.gene53118:intron | 25.0% |
| ! | TTGATAAAAACAAGTGTCTA+CGG | - | chr5.4:32224612-32224631 | None:intergenic | 25.0% |
| !! | AAACATATAGCCTTCTTTTA+GGG | - | chr5.4:32228911-32228930 | None:intergenic | 25.0% |
| !! | AAAGATTAGTTAGGATATTG+TGG | - | chr5.4:32227933-32227952 | None:intergenic | 25.0% |
| !! | ACTTGACTTAAAGATTAGTT+AGG | - | chr5.4:32227942-32227961 | None:intergenic | 25.0% |
| !! | ATAACATCAGTGTTGTTAAA+TGG | + | chr5.4:32226742-32226761 | MS.gene53118:intron | 25.0% |
| !! | TATTGAGATATCTTTTTCCT+TGG | + | chr5.4:32226902-32226921 | MS.gene53118:intron | 25.0% |
| !! | TTTTATTCCAGCATATAGTA+GGG | + | chr5.4:32226649-32226668 | MS.gene53118:intron | 25.0% |
| !! | TTTTGACATAACTACTCAAA+AGG | - | chr5.4:32227885-32227904 | None:intergenic | 25.0% |
| !!! | AAAACTGAAACCATTGATTT+TGG | - | chr5.4:32225859-32225878 | None:intergenic | 25.0% |
| !!! | AAACTGAAACCATTGATTTT+GGG | - | chr5.4:32225858-32225877 | None:intergenic | 25.0% |
| !!! | AGAACTGACTTTTATTTCTT+AGG | + | chr5.4:32227197-32227216 | MS.gene53118:intron | 25.0% |
| !!! | ATAACTACTCAAAAGGTATT+GGG | - | chr5.4:32227878-32227897 | None:intergenic | 25.0% |
| !!! | ATGTTGATTTTCAATGTTAC+TGG | + | chr5.4:32225649-32225668 | MS.gene53118:intron | 25.0% |
| !!! | CCCATTTCATTTTATTTTAG+TGG | - | chr5.4:32228036-32228055 | None:intergenic | 25.0% |
| !!! | TTCTGTCTTTGATTTTGTTA+TGG | + | chr5.4:32228851-32228870 | MS.gene53118:intron | 25.0% |
| !!! | TTTTAGGATTTATTCCATGT+TGG | + | chr5.4:32226622-32226641 | MS.gene53118:intron | 25.0% |
| AAACTTTCTTACATCTGATC+TGG | - | chr5.4:32226311-32226330 | None:intergenic | 30.0% | |
| AACACACATACACTAGATAT+TGG | + | chr5.4:32225242-32225261 | MS.gene53118:intron | 30.0% | |
| AACAGGTTATAAAACCAGAA+TGG | - | chr5.4:32225682-32225701 | None:intergenic | 30.0% | |
| AACTAATATAATAGGGACGA+AGG | + | chr5.4:32224838-32224857 | MS.gene53118:intron | 30.0% | |
| AATATAACCCTACTATATGC+TGG | - | chr5.4:32226659-32226678 | None:intergenic | 30.0% | |
| AATATGCACCACTTATGTAA+AGG | - | chr5.4:32225317-32225336 | None:intergenic | 30.0% | |
| AATTATGCCTTTGGATGAAT+AGG | + | chr5.4:32228141-32228160 | MS.gene53118:intron | 30.0% | |
| ACAGGTTATAAAACCAGAAT+GGG | - | chr5.4:32225681-32225700 | None:intergenic | 30.0% | |
| ACAGTTATCATGAATGTTGA+GGG | + | chr5.4:32227713-32227732 | MS.gene53118:intron | 30.0% | |
| ATAGCATTTATCTGATCCTA+TGG | - | chr5.4:32226202-32226221 | None:intergenic | 30.0% | |
| ATGAATAGGATATCTCCAAA+TGG | + | chr5.4:32228155-32228174 | MS.gene53118:intron | 30.0% | |
| ATGGAAACTTCTATACTTTG+TGG | + | chr5.4:32224752-32224771 | MS.gene53118:intron | 30.0% | |
| ATTTCACCTAGAAATGATAG+TGG | + | chr5.4:32225354-32225373 | MS.gene53118:intron | 30.0% | |
| CAAAACTATAGTTATGAGGA+AGG | - | chr5.4:32227068-32227087 | None:intergenic | 30.0% | |
| CTAATAATTCTTCACTTTGC+AGG | + | chr5.4:32228644-32228663 | MS.gene53118:intron | 30.0% | |
| CTAGTCTATTCGTTATGAAA+CGG | - | chr5.4:32226169-32226188 | None:intergenic | 30.0% | |
| CTATAATATGAGACATTGTC+AGG | - | chr5.4:32227665-32227684 | None:intergenic | 30.0% | |
| CTGCAAAGTGAAGAATTATT+AGG | - | chr5.4:32228646-32228665 | None:intergenic | 30.0% | |
| CTTTCAACCCAGTATTTATT+AGG | - | chr5.4:32225574-32225593 | None:intergenic | 30.0% | |
| GAAAAATTACATGATGGTCA+GGG | - | chr5.4:32229206-32229225 | None:intergenic | 30.0% | |
| GATACTGTTAGCAAAACATT+TGG | + | chr5.4:32226700-32226719 | MS.gene53118:intron | 30.0% | |
| GCCACTATTATTAAATTCTG+CGG | + | chr5.4:32228374-32228393 | MS.gene53118:intron | 30.0% | |
| TAAAATGAAATGGGTACACT+CGG | + | chr5.4:32228042-32228061 | MS.gene53118:intron | 30.0% | |
| TAATGCACTTATAAACTCAG+AGG | + | chr5.4:32229307-32229326 | MS.gene53118:CDS | 30.0% | |
| TAGTCTATTCGTTATGAAAC+GGG | - | chr5.4:32226168-32226187 | None:intergenic | 30.0% | |
| TATACCAATCACAAGAAGAT+TGG | + | chr5.4:32227838-32227857 | MS.gene53118:intron | 30.0% | |
| TATATGTATGAAGTGTGCTA+AGG | - | chr5.4:32226061-32226080 | None:intergenic | 30.0% | |
| TATATGTTTGAGTGTTCAAC+TGG | + | chr5.4:32228922-32228941 | MS.gene53118:CDS | 30.0% | |
| TATTCATAAATTTCCTGTGG+TGG | - | chr5.4:32226797-32226816 | None:intergenic | 30.0% | |
| TGAAAAATTACATGATGGTC+AGG | - | chr5.4:32229207-32229226 | None:intergenic | 30.0% | |
| TGAATAGGATATCTCCAAAT+GGG | + | chr5.4:32228156-32228175 | MS.gene53118:intron | 30.0% | |
| TGATAAAAACAAGTGTCTAC+GGG | - | chr5.4:32224611-32224630 | None:intergenic | 30.0% | |
| TGATGTGATTTCTGTAATGA+AGG | + | chr5.4:32225525-32225544 | MS.gene53118:CDS | 30.0% | |
| TGGAAACTTCTATACTTTGT+GGG | + | chr5.4:32224753-32224772 | MS.gene53118:intron | 30.0% | |
| TGGAATAAAACAATCCAACA+TGG | - | chr5.4:32226639-32226658 | None:intergenic | 30.0% | |
| TTAGTGAATCCAAGAGATTT+GGG | - | chr5.4:32228249-32228268 | None:intergenic | 30.0% | |
| TTATAAAACCAGAATGGGAT+AGG | - | chr5.4:32225676-32225695 | None:intergenic | 30.0% | |
| TTGATCTACGAAATTTGTAG+CGG | - | chr5.4:32224311-32224330 | None:intergenic | 30.0% | |
| TTTAGTGAATCCAAGAGATT+TGG | - | chr5.4:32228250-32228269 | None:intergenic | 30.0% | |
| ! | AATCATTTTGTTCTTAGGCA+GGG | - | chr5.4:32224789-32224808 | None:intergenic | 30.0% |
| ! | ACTTGACATGTAATTTGTGT+TGG | + | chr5.4:32225932-32225951 | MS.gene53118:intron | 30.0% |
| ! | AGAAGTTGTATGTTGTTTGT+AGG | + | chr5.4:32229018-32229037 | MS.gene53118:intron | 30.0% |
| ! | AGTCCTTAATGTTGACTAAA+AGG | + | chr5.4:32227014-32227033 | MS.gene53118:intron | 30.0% |
| ! | ATATCATGAAAGGTTTTCTC+TGG | + | chr5.4:32228787-32228806 | MS.gene53118:intron | 30.0% |
| ! | ATTTGTGCAGAATTTTCTTG+TGG | + | chr5.4:32227346-32227365 | MS.gene53118:intron | 30.0% |
| ! | CAAACATATAGCCTTCTTTT+AGG | - | chr5.4:32228912-32228931 | None:intergenic | 30.0% |
| ! | CATAACTACTCAAAAGGTAT+TGG | - | chr5.4:32227879-32227898 | None:intergenic | 30.0% |
| ! | GACACAAGAGTATGTTTATA+TGG | + | chr5.4:32226841-32226860 | MS.gene53118:intron | 30.0% |
| ! | GACATTTAAAATGTTTGCCA+TGG | + | chr5.4:32225954-32225973 | MS.gene53118:intron | 30.0% |
| ! | GTCCTTAATGTTGACTAAAA+GGG | + | chr5.4:32227015-32227034 | MS.gene53118:intron | 30.0% |
| ! | TAATCATTTTGTTCTTAGGC+AGG | - | chr5.4:32224790-32224809 | None:intergenic | 30.0% |
| ! | TATTTCTTAGGCTTGAGTTT+TGG | + | chr5.4:32227209-32227228 | MS.gene53118:intron | 30.0% |
| ! | TATTTTGTACAAGCAGTAAC+TGG | - | chr5.4:32225050-32225069 | None:intergenic | 30.0% |
| ! | TCAAACCATTTTGAATGAGA+AGG | + | chr5.4:32225984-32226003 | MS.gene53118:intron | 30.0% |
| ! | TCCTTAATGTTGACTAAAAG+GGG | + | chr5.4:32227016-32227035 | MS.gene53118:intron | 30.0% |
| ! | TCTGATTTGTATGTTGCATT+AGG | - | chr5.4:32225215-32225234 | None:intergenic | 30.0% |
| ! | TGAATTGTGCAAGTAGTTTT+AGG | + | chr5.4:32226435-32226454 | MS.gene53118:intron | 30.0% |
| ! | TTTCAGCCATTATTTTCTGT+TGG | - | chr5.4:32229346-32229365 | None:intergenic | 30.0% |
| !! | GTTTTATTCCAGCATATAGT+AGG | + | chr5.4:32226648-32226667 | MS.gene53118:intron | 30.0% |
| !! | TTGAAATTGCTGTTTCATCT+AGG | + | chr5.4:32229247-32229266 | MS.gene53118:intron | 30.0% |
| !!! | GAGTTTTGGATAGAACATTA+TGG | + | chr5.4:32227223-32227242 | MS.gene53118:intron | 30.0% |
| !!! | GTATGTCTGTTTTTATAGGA+GGG | + | chr5.4:32228607-32228626 | MS.gene53118:intron | 30.0% |
| !!! | GTTGATTTGCCTTTTGTTTA+TGG | - | chr5.4:32224998-32225017 | None:intergenic | 30.0% |
| !!! | GTTGGTATGTCTGTTTTTAT+AGG | + | chr5.4:32228603-32228622 | MS.gene53118:intron | 30.0% |
| AAAATGAAATGGGTACACTC+GGG | + | chr5.4:32228043-32228062 | MS.gene53118:intron | 35.0% | |
| AACCCAGTATTTATTAGGCT+TGG | - | chr5.4:32225569-32225588 | None:intergenic | 35.0% | |
| AACTCTTGAACCCTCTATTT+CGG | + | chr5.4:32227169-32227188 | MS.gene53118:intron | 35.0% | |
| AACTTATGTCCATTTGGAGA+TGG | - | chr5.4:32226099-32226118 | None:intergenic | 35.0% | |
| AAGTATGCATGGACAGAAAA+AGG | - | chr5.4:32228980-32228999 | None:intergenic | 35.0% | |
| AATGGTTTGAAAGAGATCCA+TGG | - | chr5.4:32225974-32225993 | None:intergenic | 35.0% | |
| ACAAACCAGACTATTAAGCT+TGG | + | chr5.4:32224463-32224482 | MS.gene53118:CDS | 35.0% | |
| ACAAGCAATTCACGTGTTAT+AGG | - | chr5.4:32227141-32227160 | None:intergenic | 35.0% | |
| ACATGGAATGTGAAAACTAG+AGG | - | chr5.4:32229146-32229165 | None:intergenic | 35.0% | |
| ACCTACTTTAGCATTTCTAC+CGG | + | chr5.4:32227379-32227398 | MS.gene53118:CDS | 35.0% | |
| ATCATTACTAGTGGTGTATG+TGG | + | chr5.4:32228092-32228111 | MS.gene53118:intron | 35.0% | |
| CAATTCACGTGTTATAGGTT+AGG | - | chr5.4:32227136-32227155 | None:intergenic | 35.0% | |
| CACAGTTATCATGAATGTTG+AGG | + | chr5.4:32227712-32227731 | MS.gene53118:intron | 35.0% | |
| CAGCATAATCAGAATATGGA+AGG | - | chr5.4:32226232-32226251 | None:intergenic | 35.0% | |
| CAGTTATCATGAATGTTGAG+GGG | + | chr5.4:32227714-32227733 | MS.gene53118:intron | 35.0% | |
| CTCCAAGCCTAATAAATACT+GGG | + | chr5.4:32225564-32225583 | MS.gene53118:CDS | 35.0% | |
| CTTGGTCTAAATTATGCCTT+TGG | + | chr5.4:32228132-32228151 | MS.gene53118:intron | 35.0% | |
| GAATAGGATATCTCCAAATG+GGG | + | chr5.4:32228157-32228176 | MS.gene53118:intron | 35.0% | |
| GAGAAATAAGTATCCTAGAC+AGG | - | chr5.4:32227617-32227636 | None:intergenic | 35.0% | |
| GAGATATCCTATTCATCCAA+AGG | - | chr5.4:32228151-32228170 | None:intergenic | 35.0% | |
| GAGTAGGTTCAAGTATTTCT+TGG | + | chr5.4:32228114-32228133 | MS.gene53118:intron | 35.0% | |
| GCCGCAGAATTTAATAATAG+TGG | - | chr5.4:32228378-32228397 | None:intergenic | 35.0% | |
| GCTAATAACTAAACCCCATT+TGG | - | chr5.4:32228173-32228192 | None:intergenic | 35.0% | |
| GGTTGAAAGTTCTCAAAAGA+GGG | + | chr5.4:32225585-32225604 | MS.gene53118:CDS | 35.0% | |
| GTCCTGTACTTGATACTTTA+GGG | + | chr5.4:32229060-32229079 | MS.gene53118:CDS | 35.0% | |
| GTTAAATAATGTTTCCGGGT+TGG | + | chr5.4:32228585-32228604 | MS.gene53118:intron | 35.0% | |
| GTTTCCATTCTACAACAAGA+GGG | + | chr5.4:32225799-32225818 | MS.gene53118:intron | 35.0% | |
| TAAAAACAGACATACCAACC+CGG | - | chr5.4:32228602-32228621 | None:intergenic | 35.0% | |
| TAATTCTTCACTTTGCAGGT+TGG | + | chr5.4:32228648-32228667 | MS.gene53118:intron | 35.0% | |
| TATATAGTTTAGCCCAATGC+TGG | - | chr5.4:32226135-32226154 | None:intergenic | 35.0% | |
| TATGCATACGCAATAATCTG+TGG | - | chr5.4:32228412-32228431 | None:intergenic | 35.0% | |
| TCATACAAAAATTCGAGCAG+AGG | - | chr5.4:32225173-32225192 | None:intergenic | 35.0% | |
| TCCATACTTGGTATCTTCTT+AGG | + | chr5.4:32225408-32225427 | MS.gene53118:intron | 35.0% | |
| TCCTAAGAAGATACCAAGTA+TGG | - | chr5.4:32225412-32225431 | None:intergenic | 35.0% | |
| TCTCCAAGCCTAATAAATAC+TGG | + | chr5.4:32225563-32225582 | MS.gene53118:CDS | 35.0% | |
| TCTTTACTCATCTCCATACT+TGG | + | chr5.4:32225396-32225415 | MS.gene53118:intron | 35.0% | |
| TGGTGTCCAACAGAAAATAA+TGG | + | chr5.4:32229337-32229356 | MS.gene53118:CDS | 35.0% | |
| TGTCCTGTACTTGATACTTT+AGG | + | chr5.4:32229059-32229078 | MS.gene53118:CDS | 35.0% | |
| TGTTTCCATTCTACAACAAG+AGG | + | chr5.4:32225798-32225817 | MS.gene53118:intron | 35.0% | |
| TTCTATACTTTGTGGGTAGA+GGG | + | chr5.4:32224760-32224779 | MS.gene53118:intron | 35.0% | |
| TTGACTTTACCAGCAATTAC+TGG | + | chr5.4:32225074-32225093 | MS.gene53118:intron | 35.0% | |
| TTGGCTGAAAATAGAGAAAC+AGG | - | chr5.4:32225699-32225718 | None:intergenic | 35.0% | |
| TTTATGCACACCTCAAACTT+AGG | - | chr5.4:32227440-32227459 | None:intergenic | 35.0% | |
| ! | AACCATTTTGAATGAGAAGG+TGG | + | chr5.4:32225987-32226006 | MS.gene53118:intron | 35.0% |
| ! | ACATCAGTGTTGTTAAATGG+TGG | + | chr5.4:32226745-32226764 | MS.gene53118:intron | 35.0% |
| ! | AGTTCTTTTCACCGAAATAG+AGG | - | chr5.4:32227183-32227202 | None:intergenic | 35.0% |
| ! | CTAGGATACTTATTTCTCTG+TGG | + | chr5.4:32227619-32227638 | MS.gene53118:intron | 35.0% |
| ! | CTGCTCGAATTTTTGTATGA+TGG | + | chr5.4:32225173-32225192 | MS.gene53118:intron | 35.0% |
| ! | CTTAATAGTCTGGTTTGTCA+TGG | - | chr5.4:32224461-32224480 | None:intergenic | 35.0% |
| ! | GACTAGCAATGTTTTTCCAT+AGG | + | chr5.4:32226183-32226202 | MS.gene53118:intron | 35.0% |
| ! | GTCAGGACTAATTCTAGAAA+AGG | - | chr5.4:32227648-32227667 | None:intergenic | 35.0% |
| ! | GTTCTTTTCACCGAAATAGA+GGG | - | chr5.4:32227182-32227201 | None:intergenic | 35.0% |
| ! | TCCCCTTTTAGTCAACATTA+AGG | - | chr5.4:32227020-32227039 | None:intergenic | 35.0% |
| ! | TGAATGCTGTTATTTGTCGA+TGG | + | chr5.4:32224342-32224361 | MS.gene53118:intron | 35.0% |
| ! | TGATTTTCCTTTCCAGCATT+GGG | + | chr5.4:32226120-32226139 | MS.gene53118:intron | 35.0% |
| ! | TTCCCTAAAGTATCAAGTAC+AGG | - | chr5.4:32229065-32229084 | None:intergenic | 35.0% |
| ! | TTGATTTTCCTTTCCAGCAT+TGG | + | chr5.4:32226119-32226138 | MS.gene53118:intron | 35.0% |
| !! | ATAAACTCAGAGGTATTGAG+TGG | + | chr5.4:32229317-32229336 | MS.gene53118:CDS | 35.0% |
| !! | CTAGATTTTTAGGCTTGAGA+GGG | + | chr5.4:32224646-32224665 | MS.gene53118:intron | 35.0% |
| !! | TACCAGTTTTAACAGACAAG+AGG | - | chr5.4:32227996-32228015 | None:intergenic | 35.0% |
| !! | TAGATTTTTAGGCTTGAGAG+GGG | + | chr5.4:32224647-32224666 | MS.gene53118:intron | 35.0% |
| !!! | GGTATGTCTGTTTTTATAGG+AGG | + | chr5.4:32228606-32228625 | MS.gene53118:intron | 35.0% |
| !!! | TTTGCGGTTTTTTAGTATCC+TGG | + | chr5.4:32224412-32224431 | MS.gene53118:intron | 35.0% |
| AAACATACTCTTGTGTCCCA+TGG | - | chr5.4:32226838-32226857 | None:intergenic | 40.0% | |
| AACAGAAACAAGGGAATGAC+AGG | - | chr5.4:32228568-32228587 | None:intergenic | 40.0% | |
| AACCAGACTATTAAGCTTGG+AGG | + | chr5.4:32224466-32224485 | MS.gene53118:CDS | 40.0% | |
| AAGGGGAATTAGCAATTGCA+TGG | + | chr5.4:32227033-32227052 | MS.gene53118:intron | 40.0% | |
| ACACAAATACAAGCCCATGA+TGG | + | chr5.4:32227091-32227110 | MS.gene53118:intron | 40.0% | |
| ACCAATCACAAGAAGATTGG+AGG | + | chr5.4:32227841-32227860 | MS.gene53118:intron | 40.0% | |
| ACCACTCTGAATTACCATCA+TGG | - | chr5.4:32227108-32227127 | None:intergenic | 40.0% | |
| ACCGGTAGAAATGCTAAAGT+AGG | - | chr5.4:32227383-32227402 | None:intergenic | 40.0% | |
| ACCTCCAATCTTCTTGTGAT+TGG | - | chr5.4:32227845-32227864 | None:intergenic | 40.0% | |
| ACTATGCGTAATGAGAGTCT+AGG | - | chr5.4:32227502-32227521 | None:intergenic | 40.0% | |
| AGGATATTGTGGCAAGTAAC+TGG | - | chr5.4:32227922-32227941 | None:intergenic | 40.0% | |
| AGTATCAAGTACAGGACATG+TGG | - | chr5.4:32229057-32229076 | None:intergenic | 40.0% | |
| ATATCAACCCTCTTCGTTCA+AGG | - | chr5.4:32224951-32224970 | None:intergenic | 40.0% | |
| ATCATGAATGTTGAGGGGAT+TGG | + | chr5.4:32227719-32227738 | MS.gene53118:intron | 40.0% | |
| CAGTCATATCAGTCCATTCT+AGG | - | chr5.4:32225775-32225794 | None:intergenic | 40.0% | |
| CCACTCTGAATTACCATCAT+GGG | - | chr5.4:32227107-32227126 | None:intergenic | 40.0% | |
| CCTCTCAAGCCTAAAAATCT+AGG | - | chr5.4:32224648-32224667 | None:intergenic | 40.0% | |
| CTTCTATACTTTGTGGGTAG+AGG | + | chr5.4:32224759-32224778 | MS.gene53118:intron | 40.0% | |
| GACCACCTTCTCATTCAAAA+TGG | - | chr5.4:32225992-32226011 | None:intergenic | 40.0% | |
| GAGCATCCACTATCATTTCT+AGG | - | chr5.4:32225363-32225382 | None:intergenic | 40.0% | |
| GATAGTTGTAGATGGAGATG+AGG | - | chr5.4:32229279-32229298 | None:intergenic | 40.0% | |
| GCAATGTGCTAATCTGACTT+GGG | - | chr5.4:32226939-32226958 | None:intergenic | 40.0% | |
| GCTACGATGATAGTTGTAGA+TGG | - | chr5.4:32229287-32229306 | None:intergenic | 40.0% | |
| GGAAGAAAACCATCTCCAAA+TGG | + | chr5.4:32226087-32226106 | MS.gene53118:intron | 40.0% | |
| GGGTGAGTATATAAGTGTGA+AGG | + | chr5.4:32225605-32225624 | MS.gene53118:intron | 40.0% | |
| GGGTTGAAAGTTCTCAAAAG+AGG | + | chr5.4:32225584-32225603 | MS.gene53118:CDS | 40.0% | |
| GTATCAAGTACAGGACATGT+GGG | - | chr5.4:32229056-32229075 | None:intergenic | 40.0% | |
| GTGATTTCTGTAATGAAGGC+TGG | + | chr5.4:32225529-32225548 | MS.gene53118:CDS | 40.0% | |
| TAAGGAATTGCCTTCAATGC+TGG | + | chr5.4:32224865-32224884 | MS.gene53118:intron | 40.0% | |
| TAGAGGGTTCAAGAGTTGAA+TGG | - | chr5.4:32227166-32227185 | None:intergenic | 40.0% | |
| TATTCGTTATGAAACGGGCA+AGG | - | chr5.4:32226163-32226182 | None:intergenic | 40.0% | |
| TCATGAATGTTGAGGGGATT+GGG | + | chr5.4:32227720-32227739 | MS.gene53118:intron | 40.0% | |
| TGCCTCTTGTCTGTTAAAAC+TGG | + | chr5.4:32227991-32228010 | MS.gene53118:intron | 40.0% | |
| TGTTATGGTGTTTAGCCAGT+GGG | + | chr5.4:32228866-32228885 | MS.gene53118:intron | 40.0% | |
| TTGCAGGACAGAACAAAAGA+GGG | - | chr5.4:32228533-32228552 | None:intergenic | 40.0% | |
| TTGTTATGGTGTTTAGCCAG+TGG | + | chr5.4:32228865-32228884 | MS.gene53118:intron | 40.0% | |
| TTTATGAATATTGCCCGCCA+TGG | + | chr5.4:32226807-32226826 | MS.gene53118:intron | 40.0% | |
| TTTCTGTAATGAAGGCTGGA+AGG | + | chr5.4:32225533-32225552 | MS.gene53118:CDS | 40.0% | |
| TTTGCAGGACAGAACAAAAG+AGG | - | chr5.4:32228534-32228553 | None:intergenic | 40.0% | |
| TTTGCATAGCCAGTAATTGC+TGG | - | chr5.4:32225086-32225105 | None:intergenic | 40.0% | |
| ! | GTGTTGTTAAATGGTGGTCA+TGG | + | chr5.4:32226751-32226770 | MS.gene53118:intron | 40.0% |
| ! | TATCATGCAACCAGCATTGA+AGG | - | chr5.4:32224878-32224897 | None:intergenic | 40.0% |
| ! | TTAGCCCTCTTGTTGTAGAA+TGG | - | chr5.4:32225806-32225825 | None:intergenic | 40.0% |
| ! | TTCAATGCTGGTTGCATGAT+AGG | + | chr5.4:32224877-32224896 | MS.gene53118:intron | 40.0% |
| ! | TTGGTGCTTTGCTTTATGTG+CGG | + | chr5.4:32228667-32228686 | MS.gene53118:CDS | 40.0% |
| !! | CCTAGATTTTTAGGCTTGAG+AGG | + | chr5.4:32224645-32224664 | MS.gene53118:intron | 40.0% |
| !! | TTTTTAGTATCCTGGCGATG+TGG | + | chr5.4:32224420-32224439 | MS.gene53118:intron | 40.0% |
| AAGAGATTTGGGTGGAGACA+TGG | - | chr5.4:32228238-32228257 | None:intergenic | 45.0% | |
| AAGAGGGCTAAAGTGGAAGT+TGG | + | chr5.4:32225815-32225834 | MS.gene53118:intron | 45.0% | |
| AAGATGTGGCCAAGACTATG+AGG | + | chr5.4:32228314-32228333 | MS.gene53118:intron | 45.0% | |
| AATAGGGACGAAGGCTTGTA+AGG | + | chr5.4:32224847-32224866 | MS.gene53118:intron | 45.0% | |
| ACAATGTTGTCGATGGCAGA+AGG | - | chr5.4:32226878-32226897 | None:intergenic | 45.0% | |
| ACAGCTCAGGATTCATTCCA+GGG | - | chr5.4:32228707-32228726 | None:intergenic | 45.0% | |
| ACTAGTGGTGTATGTGGAGT+AGG | + | chr5.4:32228098-32228117 | MS.gene53118:intron | 45.0% | |
| AGAACTGAATCCTCTGCATG+CGG | - | chr5.4:32226271-32226290 | None:intergenic | 45.0% | |
| AGAGGCAAGATTTCTCAAGC+AGG | - | chr5.4:32227978-32227997 | None:intergenic | 45.0% | |
| AGGATGTCCTTGAACGAAGA+GGG | + | chr5.4:32224941-32224960 | MS.gene53118:intron | 45.0% | |
| AGTTTAGCCCAATGCTGGAA+AGG | - | chr5.4:32226130-32226149 | None:intergenic | 45.0% | |
| ATGTCTCCACCCAAATCTCT+TGG | + | chr5.4:32228237-32228256 | MS.gene53118:intron | 45.0% | |
| CACACAACTTGGCACTCTAA+AGG | - | chr5.4:32224714-32224733 | None:intergenic | 45.0% | |
| CAGACTATTAAGCTTGGAGG+CGG | + | chr5.4:32224469-32224488 | MS.gene53118:CDS | 45.0% | |
| CATGCAGAGGATTCAGTTCT+TGG | + | chr5.4:32226271-32226290 | MS.gene53118:CDS | 45.0% | |
| CCCATGATGGTAATTCAGAG+TGG | + | chr5.4:32227104-32227123 | MS.gene53118:intron | 45.0% | |
| CTACAACAAGAGGGCTAAAG+TGG | + | chr5.4:32225808-32225827 | MS.gene53118:intron | 45.0% | |
| CTGATGTAGAGCTATAAGCC+TGG | - | chr5.4:32226976-32226995 | None:intergenic | 45.0% | |
| CTTGGGTTTCAGAAACTCCA+AGG | - | chr5.4:32226922-32226941 | None:intergenic | 45.0% | |
| GAAGATTGGAGGTCAAACGT+TGG | + | chr5.4:32227852-32227871 | MS.gene53118:intron | 45.0% | |
| GGCAATGTGCTAATCTGACT+TGG | - | chr5.4:32226940-32226959 | None:intergenic | 45.0% | |
| GTGAATCCAAGAGATTTGGG+TGG | - | chr5.4:32228246-32228265 | None:intergenic | 45.0% | |
| TAATGAAGGCTGGAAGGCTT+AGG | + | chr5.4:32225539-32225558 | MS.gene53118:CDS | 45.0% | |
| TAGGATGTCCTTGAACGAAG+AGG | + | chr5.4:32224940-32224959 | MS.gene53118:intron | 45.0% | |
| TGAATGGACGTGTTTGGGTA+TGG | + | chr5.4:32229114-32229133 | MS.gene53118:intron | 45.0% | |
| TGGCTTGAATGGACGTGTTT+GGG | + | chr5.4:32229109-32229128 | MS.gene53118:CDS | 45.0% | |
| TGGTGCTTTGCTTTATGTGC+GGG | + | chr5.4:32228668-32228687 | MS.gene53118:CDS | 45.0% | |
| TTACTGGTCCTATCCCATTC+TGG | + | chr5.4:32225665-32225684 | MS.gene53118:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr5.4:32227272-32227291 | None:intergenic | 45.0% |
| ! | ACTGGTCTCTCAAGGATGTA+TGG | + | chr5.4:32228940-32228959 | MS.gene53118:intron | 45.0% |
| ! | AGTGTTCAACTGGTCTCTCA+AGG | + | chr5.4:32228932-32228951 | MS.gene53118:CDS | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr5.4:32227273-32227292 | None:intergenic | 45.0% |
| ! | TCTGGTTTGTCATGGTAGAG+AGG | - | chr5.4:32224453-32224472 | None:intergenic | 45.0% |
| ! | TTGGCTTGAATGGACGTGTT+TGG | + | chr5.4:32229108-32229127 | MS.gene53118:CDS | 45.0% |
| !! | AAAGTGGAAGTTGGTGGGAT+GGG | + | chr5.4:32225824-32225843 | MS.gene53118:intron | 45.0% |
| !! | CTTTAGAGTGCCAAGTTGTG+TGG | + | chr5.4:32224712-32224731 | MS.gene53118:intron | 45.0% |
| !! | GAGATAGCTGTTGGCTTGAA+TGG | + | chr5.4:32229098-32229117 | MS.gene53118:CDS | 45.0% |
| !! | GAGTTTGGTGCCCTAAAAGA+AGG | + | chr5.4:32228898-32228917 | MS.gene53118:CDS | 45.0% |
| !! | TAAAGTGGAAGTTGGTGGGA+TGG | + | chr5.4:32225823-32225842 | MS.gene53118:intron | 45.0% |
| !!! | GATTTTTGGTCAACCACCAC+AGG | + | chr5.4:32226781-32226800 | MS.gene53118:intron | 45.0% |
| !!! | TATCTATTTTATATAAAAAA+GGG | - | chr5.4:32227594-32227613 | None:intergenic | 5.0% |
| AAACTCTCCAGCTTTCCCAC+TGG | - | chr5.4:32228884-32228903 | None:intergenic | 50.0% | |
| ACCATGCAACAAGCGTTCAC+AGG | - | chr5.4:32228204-32228223 | None:intergenic | 50.0% | |
| ACTAAGTGGGGTCGGATACA+TGG | - | chr5.4:32227260-32227279 | None:intergenic | 50.0% | |
| AGATTAGCACATTGCCCCAG+AGG | + | chr5.4:32226944-32226963 | MS.gene53118:intron | 50.0% | |
| AGGGCTAAAGTGGAAGTTGG+TGG | + | chr5.4:32225818-32225837 | MS.gene53118:intron | 50.0% | |
| AGTGGGAAAGCTGGAGAGTT+TGG | + | chr5.4:32228883-32228902 | MS.gene53118:CDS | 50.0% | |
| ATACGCCAGCCTCATAGTCT+TGG | - | chr5.4:32228326-32228345 | None:intergenic | 50.0% | |
| ATGAATATTGCCCGCCATGG+AGG | + | chr5.4:32226810-32226829 | MS.gene53118:intron | 50.0% | |
| ATGTATCCGACCCCACTTAG+TGG | + | chr5.4:32227259-32227278 | MS.gene53118:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr5.4:32227271-32227290 | MS.gene53118:intron | 50.0% | |
| CCTCCTTCAAATGCAAGCAC+CGG | - | chr5.4:32227401-32227420 | None:intergenic | 50.0% | |
| CGCCTCCAAGCTTAATAGTC+TGG | - | chr5.4:32224471-32224490 | None:intergenic | 50.0% | |
| CGGGTTGTTAAAGCAATCCC+TGG | + | chr5.4:32228687-32228706 | MS.gene53118:CDS | 50.0% | |
| CTACCGGTGCTTGCATTTGA+AGG | + | chr5.4:32227395-32227414 | MS.gene53118:CDS | 50.0% | |
| CTCTCGTTCGAGATAGCTGT+TGG | + | chr5.4:32229089-32229108 | MS.gene53118:CDS | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr5.4:32227268-32227287 | None:intergenic | 50.0% | |
| GAATGTTGAGGGGATTGGGT+AGG | + | chr5.4:32227724-32227743 | MS.gene53118:intron | 50.0% | |
| GACAGCTCAGGATTCATTCC+AGG | - | chr5.4:32228708-32228727 | None:intergenic | 50.0% | |
| GCAATAATCTGTGGCCGTGT+GGG | - | chr5.4:32228403-32228422 | None:intergenic | 50.0% | |
| GGGAATGACAGGTCAAGTGT+TGG | - | chr5.4:32228557-32228576 | None:intergenic | 50.0% | |
| GTTAAATGGTGGTCATGGCG+TGG | + | chr5.4:32226756-32226775 | MS.gene53118:intron | 50.0% | |
| TGTATCCGACCCCACTTAGT+GGG | + | chr5.4:32227260-32227279 | MS.gene53118:intron | 50.0% | |
| TGTTTAGCCAGTGGGAAAGC+TGG | + | chr5.4:32228874-32228893 | MS.gene53118:intron | 50.0% | |
| TTAAGCTTGGAGGCGGTCTT+CGG | + | chr5.4:32224476-32224495 | MS.gene53118:CDS | 50.0% | |
| ! | AGCTGTCTTGCACTGATGGT+TGG | + | chr5.4:32228721-32228740 | MS.gene53118:intron | 50.0% |
| ! | ATAAGCCTGGAGTACTCCTC+TGG | - | chr5.4:32226963-32226982 | None:intergenic | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr5.4:32227274-32227293 | None:intergenic | 50.0% |
| ! | GGGCTAAAGTGGAAGTTGGT+GGG | + | chr5.4:32225819-32225838 | MS.gene53118:intron | 50.0% |
| ! | TAAGCCTGGAGTACTCCTCT+GGG | - | chr5.4:32226962-32226981 | None:intergenic | 50.0% |
| ! | TAGAGTGCCAAGTTGTGTGG+AGG | + | chr5.4:32224715-32224734 | MS.gene53118:intron | 50.0% |
| ! | TCCTGTGAACGCTTGTTGCA+TGG | + | chr5.4:32228200-32228219 | MS.gene53118:intron | 50.0% |
| !! | CAGGTCAAGTGTTGGTTTGC+AGG | - | chr5.4:32228549-32228568 | None:intergenic | 50.0% |
| AAATGGTGGTCATGGCGTGG+CGG | + | chr5.4:32226759-32226778 | MS.gene53118:intron | 55.0% | |
| AAATTCTGCGGCTGCCCACA+CGG | + | chr5.4:32228386-32228405 | MS.gene53118:intron | 55.0% | |
| ACAGTATGTGCCGCATGCAG+AGG | + | chr5.4:32226258-32226277 | MS.gene53118:intron | 55.0% | |
| AGGTCAAGAACCACATCGCC+AGG | - | chr5.4:32224433-32224452 | None:intergenic | 55.0% | |
| CCATCAGTGCAAGACAGCTC+AGG | - | chr5.4:32228720-32228739 | None:intergenic | 55.0% | |
| CCGGTGCTTGCATTTGAAGG+AGG | + | chr5.4:32227398-32227417 | MS.gene53118:CDS | 55.0% | |
| CCTGAGCTGTCTTGCACTGA+TGG | + | chr5.4:32228717-32228736 | MS.gene53118:CDS | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr5.4:32227266-32227285 | MS.gene53118:intron | 55.0% | |
| CGCAATAATCTGTGGCCGTG+TGG | - | chr5.4:32228404-32228423 | None:intergenic | 55.0% | |
| GGCTGAAAAGCTGCTGCAGA+GGG | + | chr5.4:32229358-32229377 | MS.gene53118:CDS | 55.0% | |
| GGTACACTCGGGATGCTCAT+GGG | + | chr5.4:32228054-32228073 | MS.gene53118:intron | 55.0% | |
| TCCACTGCCTCCACACAACT+TGG | - | chr5.4:32224725-32224744 | None:intergenic | 55.0% | |
| TGGCTGAAAAGCTGCTGCAG+AGG | + | chr5.4:32229357-32229376 | MS.gene53118:CDS | 55.0% | |
| TGTGGCCAAGACTATGAGGC+TGG | + | chr5.4:32228318-32228337 | MS.gene53118:intron | 55.0% | |
| ! | AAGCCTGGAGTACTCCTCTG+GGG | - | chr5.4:32226961-32226980 | None:intergenic | 55.0% |
| !!! | GTCATGGCGTGGCGGATTTT+TGG | + | chr5.4:32226767-32226786 | MS.gene53118:intron | 55.0% |
| ACACTCGGGATGCTCATGGG+AGG | + | chr5.4:32228057-32228076 | MS.gene53118:intron | 60.0% | |
| CACTCGGGATGCTCATGGGA+GGG | + | chr5.4:32228058-32228077 | MS.gene53118:intron | 60.0% | |
| GCCAAGTTGTGTGGAGGCAG+TGG | + | chr5.4:32224721-32224740 | MS.gene53118:intron | 60.0% | |
| GGAGGCAGTGGAGCTGACTA+TGG | + | chr5.4:32224733-32224752 | MS.gene53118:intron | 60.0% | |
| GGGTACACTCGGGATGCTCA+TGG | + | chr5.4:32228053-32228072 | MS.gene53118:intron | 60.0% | |
| TGTGTCCCATGGTGCCTCCA+TGG | - | chr5.4:32226827-32226846 | None:intergenic | 60.0% | |
| !! | TTGCCCCAGAGGAGTACTCC+AGG | + | chr5.4:32226955-32226974 | MS.gene53118:intron | 60.0% |
| GTCCCATGGTGCCTCCATGG+CGG | - | chr5.4:32226824-32226843 | None:intergenic | 65.0% | |
| TCCCATGGTGCCTCCATGGC+GGG | - | chr5.4:32226823-32226842 | None:intergenic | 65.0% | |
| GCTTGGAGGCGGTCTTCGGC+AGG | + | chr5.4:32224480-32224499 | MS.gene53118:CDS | 70.0% | |
| GGAGGCGGTCTTCGGCAGGT+AGG | + | chr5.4:32224484-32224503 | MS.gene53118:intron | 70.0% | |
| !! | GCCCGCCATGGAGGCACCAT+GGG | + | chr5.4:32226819-32226838 | MS.gene53118:intron | 70.0% |
| !! | TGCCCGCCATGGAGGCACCA+TGG | + | chr5.4:32226818-32226837 | MS.gene53118:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 32224286 | 32229388 | 32224286 | ID=MS.gene53118 |
| chr5.4 | mRNA | 32224286 | 32229388 | 32224286 | ID=MS.gene53118.t1;Parent=MS.gene53118 |
| chr5.4 | exon | 32224286 | 32224336 | 32224286 | ID=MS.gene53118.t1.exon1;Parent=MS.gene53118.t1 |
| chr5.4 | CDS | 32224286 | 32224336 | 32224286 | ID=cds.MS.gene53118.t1;Parent=MS.gene53118.t1 |
| chr5.4 | exon | 32224427 | 32224501 | 32224427 | ID=MS.gene53118.t1.exon2;Parent=MS.gene53118.t1 |
| chr5.4 | CDS | 32224427 | 32224501 | 32224427 | ID=cds.MS.gene53118.t1;Parent=MS.gene53118.t1 |
| chr5.4 | exon | 32225520 | 32225606 | 32225520 | ID=MS.gene53118.t1.exon3;Parent=MS.gene53118.t1 |
| chr5.4 | CDS | 32225520 | 32225606 | 32225520 | ID=cds.MS.gene53118.t1;Parent=MS.gene53118.t1 |
| chr5.4 | exon | 32226262 | 32226318 | 32226262 | ID=MS.gene53118.t1.exon4;Parent=MS.gene53118.t1 |
| chr5.4 | CDS | 32226262 | 32226318 | 32226262 | ID=cds.MS.gene53118.t1;Parent=MS.gene53118.t1 |
| chr5.4 | exon | 32227356 | 32227448 | 32227356 | ID=MS.gene53118.t1.exon5;Parent=MS.gene53118.t1 |
| chr5.4 | CDS | 32227356 | 32227448 | 32227356 | ID=cds.MS.gene53118.t1;Parent=MS.gene53118.t1 |
| chr5.4 | exon | 32228666 | 32228738 | 32228666 | ID=MS.gene53118.t1.exon6;Parent=MS.gene53118.t1 |
| chr5.4 | CDS | 32228666 | 32228738 | 32228666 | ID=cds.MS.gene53118.t1;Parent=MS.gene53118.t1 |
| chr5.4 | exon | 32228881 | 32228956 | 32228881 | ID=MS.gene53118.t1.exon7;Parent=MS.gene53118.t1 |
| chr5.4 | CDS | 32228881 | 32228956 | 32228881 | ID=cds.MS.gene53118.t1;Parent=MS.gene53118.t1 |
| chr5.4 | exon | 32229040 | 32229130 | 32229040 | ID=MS.gene53118.t1.exon8;Parent=MS.gene53118.t1 |
| chr5.4 | CDS | 32229040 | 32229130 | 32229040 | ID=cds.MS.gene53118.t1;Parent=MS.gene53118.t1 |
| chr5.4 | exon | 32229269 | 32229388 | 32229269 | ID=MS.gene53118.t1.exon9;Parent=MS.gene53118.t1 |
| chr5.4 | CDS | 32229269 | 32229388 | 32229269 | ID=cds.MS.gene53118.t1;Parent=MS.gene53118.t1 |
| Gene Sequence |
| Protein sequence |
