Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55323.t1 | XP_003613959.1 | 99.5 | 212 | 1 | 0 | 1 | 212 | 29 | 240 | 1.60E-113 | 418.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55323.t1 | Q7KWX9 | 45.6 | 195 | 104 | 2 | 6 | 199 | 23 | 216 | 1.1e-41 | 171.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55323.t1 | B7FLI0 | 99.5 | 212 | 1 | 0 | 1 | 212 | 29 | 240 | 1.2e-113 | 418.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene27712 | MS.gene55323 | PPI |
| MS.gene025936 | MS.gene55323 | PPI |
| MS.gene072735 | MS.gene55323 | PPI |
| MS.gene55323 | MS.gene53118 | PPI |
| MS.gene55323 | MS.gene78555 | PPI |
| MS.gene55323 | MS.gene021698 | PPI |
| MS.gene85900 | MS.gene55323 | PPI |
| MS.gene023858 | MS.gene55323 | PPI |
| MS.gene42834 | MS.gene55323 | PPI |
| MS.gene024471 | MS.gene55323 | PPI |
| MS.gene91519 | MS.gene55323 | PPI |
| MS.gene55323 | MS.gene058147 | PPI |
| MS.gene55323 | MS.gene024734 | PPI |
| MS.gene21656 | MS.gene55323 | PPI |
| MS.gene55323 | MS.gene024674 | PPI |
| MS.gene55323 | MS.gene31317 | PPI |
| MS.gene043239 | MS.gene55323 | PPI |
| MS.gene55323 | MS.gene043576 | PPI |
| MS.gene55323 | MS.gene21710 | PPI |
| MS.gene55323 | MS.gene22822 | PPI |
| MS.gene21912 | MS.gene55323 | PPI |
| MS.gene55323 | MS.gene22316 | PPI |
| MS.gene55323 | MS.gene041852 | PPI |
| MS.gene79599 | MS.gene55323 | PPI |
| MS.gene050621 | MS.gene55323 | PPI |
| MS.gene52227 | MS.gene55323 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55323.t1 | MTR_5g043110 | 99.528 | 212 | 1 | 0 | 1 | 212 | 29 | 240 | 4.40e-157 | 434 |
| MS.gene55323.t1 | MTR_5g009430 | 90.909 | 121 | 11 | 0 | 92 | 212 | 22 | 142 | 2.64e-76 | 226 |
| MS.gene55323.t1 | MTR_5g009450 | 76.923 | 39 | 6 | 2 | 6 | 41 | 14 | 52 | 1.80e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55323.t1 | AT4G32175 | 75.000 | 208 | 52 | 0 | 1 | 208 | 29 | 236 | 6.12e-116 | 330 |
| MS.gene55323.t1 | AT2G25355 | 72.986 | 211 | 57 | 0 | 1 | 211 | 1 | 211 | 1.29e-115 | 328 |
| MS.gene55323.t1 | AT2G25355 | 72.986 | 211 | 57 | 0 | 1 | 211 | 29 | 239 | 2.54e-115 | 328 |
Find 57 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCCAGTACTTGATACTTT+AGG | 0.252105 | 5.2:+32845299 | MS.gene55323:CDS |
| CATGCAGAGGATTCAGTTCT+TGG | 0.279048 | 5.2:+32842574 | MS.gene55323:CDS |
| GTCCAGTACTTGATACTTTA+GGG | 0.280337 | 5.2:+32845300 | MS.gene55323:CDS |
| TCTCCAAGCCTAATAAATAC+TGG | 0.308371 | 5.2:+32841866 | MS.gene55323:CDS |
| CTTTCAACCCAGTATTTATT+AGG | 0.326945 | 5.2:-32841874 | None:intergenic |
| AGTGGGAAAGCTGGAGAGTT+TGG | 0.365780 | 5.2:+32845123 | MS.gene55323:CDS |
| TTTATACACACCTCAAACTT+AGG | 0.379556 | 5.2:-32843720 | None:intergenic |
| AACCCAGTATTTATTAGGCT+TGG | 0.381536 | 5.2:-32841869 | None:intergenic |
| CGCCTCCAAGCTTAATAGTC+TGG | 0.381633 | 5.2:-32840687 | None:intergenic |
| AAACTTTCTTACATCTGATC+TGG | 0.396631 | 5.2:-32842611 | None:intergenic |
| CTACCGGTGCTTGCATTTGA+AGG | 0.400781 | 5.2:+32843678 | MS.gene55323:CDS |
| GAGATAGCTGTTGGCTTGAA+TGG | 0.403935 | 5.2:+32845338 | MS.gene55323:CDS |
| TTGGCTTGAATGGACGTGTT+TGG | 0.414554 | 5.2:+32845348 | MS.gene55323:CDS |
| CCTGAGCTGTCTTGCACTGA+TGG | 0.416004 | 5.2:+32844965 | MS.gene55323:CDS |
| TATATGTTTGAGTGTTCAAC+TGG | 0.417882 | 5.2:+32845162 | MS.gene55323:CDS |
| GACAGCTCAGGATTCATTCC+AGG | 0.419077 | 5.2:-32844953 | None:intergenic |
| AAGAAATATACCTAAGTTTG+AGG | 0.419667 | 5.2:+32843710 | MS.gene55323:CDS |
| TGGCTTGAATGGACGTGTTT+GGG | 0.428587 | 5.2:+32845349 | MS.gene55323:CDS |
| GCTTGGAGGCGGTCTTCGTC+AGG | 0.443385 | 5.2:+32840699 | MS.gene55323:CDS |
| TTCCCTAAAGTATCAAGTAC+TGG | 0.458774 | 5.2:-32845302 | None:intergenic |
| TAATGAAGGCTGGAAGGCTT+AGG | 0.469724 | 5.2:+32841842 | MS.gene55323:CDS |
| GCTACGATGATAGTTGTAGA+TGG | 0.480268 | 5.2:-32845524 | None:intergenic |
| TGTTTAGCCAGTGGGAAAGC+TGG | 0.496155 | 5.2:+32845114 | MS.gene55323:intron |
| CTCCAAGCCTAATAAATACT+GGG | 0.501954 | 5.2:+32841867 | MS.gene55323:CDS |
| TGGTGTCCAACAGAAAATAA+TGG | 0.517813 | 5.2:+32845577 | MS.gene55323:CDS |
| ACCTACTTTAGCATTTCTAC+CGG | 0.519125 | 5.2:+32843662 | MS.gene55323:CDS |
| CTCTCGTTCGAGATAGCTGT+TGG | 0.520750 | 5.2:+32845329 | MS.gene55323:CDS |
| GTGATTTCTGTAATGAAGGC+TGG | 0.521605 | 5.2:+32841832 | MS.gene55323:CDS |
| AGTGTTCAACTGGTCTCTCA+AGG | 0.524837 | 5.2:+32845172 | MS.gene55323:CDS |
| TGGTGCTTTGCTTTATGTGC+GGG | 0.527438 | 5.2:+32844916 | MS.gene55323:CDS |
| CGGGTTGTTAAAGCAATCCC+TGG | 0.528699 | 5.2:+32844935 | MS.gene55323:CDS |
| CCATCAGTGCAAGACAGCTC+AGG | 0.529608 | 5.2:-32844965 | None:intergenic |
| GAGTTTGGTGCCCTAAAAGA+AGG | 0.530680 | 5.2:+32845138 | MS.gene55323:CDS |
| GGCTGAAAAGCTGCTGCAGA+GGG | 0.532622 | 5.2:+32845598 | MS.gene55323:CDS |
| AACCAGACTATTAAGCTTGG+AGG | 0.540367 | 5.2:+32840685 | MS.gene55323:CDS |
| TGTTATGGTGTTTAGCCAGT+GGG | 0.543275 | 5.2:+32845106 | MS.gene55323:intron |
| ACAAACCAGACTATTAAGCT+TGG | 0.554569 | 5.2:+32840682 | MS.gene55323:CDS |
| GGGTTGAAAGTTCTCAAAAG+AGG | 0.554866 | 5.2:+32841887 | MS.gene55323:CDS |
| CTTAATAGTCTGGTTTGTCA+TGG | 0.554995 | 5.2:-32840677 | None:intergenic |
| AGTATCAAGTACTGGACATG+TGG | 0.565192 | 5.2:-32845294 | None:intergenic |
| ACAGCTCAGGATTCATTCCA+GGG | 0.572903 | 5.2:-32844952 | None:intergenic |
| TGATGTGATTTCTGTAATGA+AGG | 0.589317 | 5.2:+32841828 | MS.gene55323:CDS |
| TGGCTGAAAAGCTGCTGCAG+AGG | 0.589536 | 5.2:+32845597 | MS.gene55323:CDS |
| CCTCCTTCAAATGCAAGCAC+CGG | 0.589684 | 5.2:-32843681 | None:intergenic |
| AAACTCTCCAGCTTTCCCAC+TGG | 0.590205 | 5.2:-32845121 | None:intergenic |
| GGTTGAAAGTTCTCAAAAGA+GGG | 0.594216 | 5.2:+32841888 | MS.gene55323:CDS |
| TTTCTGTAATGAAGGCTGGA+AGG | 0.595028 | 5.2:+32841836 | MS.gene55323:CDS |
| ACAGTATGTGCCGCATGCAG+AGG | 0.603783 | 5.2:+32842561 | MS.gene55323:intron |
| ACCGGTAGAAATGCTAAAGT+AGG | 0.604930 | 5.2:-32843663 | None:intergenic |
| GATAGTTGTAGATGGAGATG+AGG | 0.610158 | 5.2:-32845516 | None:intergenic |
| TTGGTGCTTTGCTTTATGTG+CGG | 0.616378 | 5.2:+32844915 | MS.gene55323:CDS |
| CCGGTGCTTGCATTTGAAGG+AGG | 0.619754 | 5.2:+32843681 | MS.gene55323:CDS |
| CAGACTATTAAGCTTGGAGG+CGG | 0.619906 | 5.2:+32840688 | MS.gene55323:CDS |
| GTATCAAGTACTGGACATGT+GGG | 0.660523 | 5.2:-32845293 | None:intergenic |
| ATAAACTCAGAGGTATTGAG+TGG | 0.675537 | 5.2:+32845557 | MS.gene55323:CDS |
| TAATGCACTTATAAACTCAG+AGG | 0.703003 | 5.2:+32845547 | MS.gene55323:CDS |
| AGAACTGAATCCTCTGCATG+CGG | 0.725568 | 5.2:-32842571 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTATCTATTTTATATAAAAA+AGG | - | chr5.2:32843878-32843897 | None:intergenic | 10.0% |
| !! | AAATAAAAATAGTCATGTAT+TGG | - | chr5.2:32842908-32842927 | None:intergenic | 15.0% |
| !! | AACAAAATAAAAGAGATATA+CGG | - | chr5.2:32844575-32844594 | None:intergenic | 15.0% |
| !! | TAATATGAAAAATTACATGA+TGG | - | chr5.2:32845452-32845471 | None:intergenic | 15.0% |
| !!! | TACATGACTATTTTTATTTT+AGG | + | chr5.2:32842909-32842928 | MS.gene55323:intron | 15.0% |
| !!! | TCAGAAATTTGATAATTTTA+GGG | - | chr5.2:32841208-32841227 | None:intergenic | 15.0% |
| !!! | TTCAGAAATTTGATAATTTT+AGG | - | chr5.2:32841209-32841228 | None:intergenic | 15.0% |
| !!! | TTTTATTTTGTTTTAAGATG+TGG | + | chr5.2:32844583-32844602 | MS.gene55323:intron | 15.0% |
| !! | AAAAAAGAAATAATGCAACA+TGG | - | chr5.2:32845403-32845422 | None:intergenic | 20.0% |
| !! | AAATTCCTTTATATCATGAA+AGG | + | chr5.2:32845017-32845036 | MS.gene55323:intron | 20.0% |
| !! | AACATTATTTAACAGAAACA+AGG | - | chr5.2:32844826-32844845 | None:intergenic | 20.0% |
| !! | ACATTATTTAACAGAAACAA+GGG | - | chr5.2:32844825-32844844 | None:intergenic | 20.0% |
| !! | ACCACTAAAATAAAATGAAA+TGG | + | chr5.2:32844315-32844334 | MS.gene55323:intron | 20.0% |
| !! | AGTTAGATGTATTTGTATTT+GGG | + | chr5.2:32844635-32844654 | MS.gene55323:intron | 20.0% |
| !! | ATTATTGTGTATGCATATAT+TGG | + | chr5.2:32844698-32844717 | MS.gene55323:intron | 20.0% |
| !! | CCACTAAAATAAAATGAAAT+GGG | + | chr5.2:32844316-32844335 | MS.gene55323:intron | 20.0% |
| !! | CTGAAATCTTTAGATTAAAT+AGG | + | chr5.2:32841224-32841243 | MS.gene55323:intron | 20.0% |
| !! | GAGTTTCAACTAATATAATA+GGG | + | chr5.2:32841134-32841153 | MS.gene55323:intron | 20.0% |
| !! | TCAAAATTTGTCATTATATG+TGG | + | chr5.2:32842205-32842224 | MS.gene55323:intron | 20.0% |
| !! | TCTATTAACTATAAAGTACA+TGG | + | chr5.2:32842713-32842732 | MS.gene55323:intron | 20.0% |
| !! | TGAACATTTAATAGAAAAAC+AGG | - | chr5.2:32842339-32842358 | None:intergenic | 20.0% |
| !! | TGAGTTTCAACTAATATAAT+AGG | + | chr5.2:32841133-32841152 | MS.gene55323:intron | 20.0% |
| !! | TGTTATATGGTTATGTTAAA+AGG | - | chr5.2:32843031-32843050 | None:intergenic | 20.0% |
| !! | TTATGCTTGCAAAAATAAAA+TGG | - | chr5.2:32845071-32845090 | None:intergenic | 20.0% |
| !! | TTGTTAAATGCAATTTGTAT+AGG | + | chr5.2:32842689-32842708 | MS.gene55323:intron | 20.0% |
| !! | TTTCTGTTAAATAATGTTTC+CGG | + | chr5.2:32844828-32844847 | MS.gene55323:intron | 20.0% |
| !!! | AATTTTCTTGTGGATATAAA+AGG | + | chr5.2:32843639-32843658 | MS.gene55323:CDS | 20.0% |
| !!! | AGCAACTTTAATTTTTACAA+TGG | - | chr5.2:32841582-32841601 | None:intergenic | 20.0% |
| !!! | AGGATTTCAATTTTGAAATT+AGG | + | chr5.2:32842878-32842897 | MS.gene55323:intron | 20.0% |
| !!! | AGTTTAATCATTTTGTTCTT+AGG | - | chr5.2:32841097-32841116 | None:intergenic | 20.0% |
| !!! | ATTATAGTTACTTTGCTTTA+TGG | + | chr5.2:32843961-32843980 | MS.gene55323:intron | 20.0% |
| !!! | CATTATTTCTTTTTTGTTTC+TGG | + | chr5.2:32845408-32845427 | MS.gene55323:intron | 20.0% |
| !!! | CTCATTTTGTAACAATTTTT+AGG | + | chr5.2:32841801-32841820 | MS.gene55323:intron | 20.0% |
| !!! | GGATTTCAATTTTGAAATTA+GGG | + | chr5.2:32842879-32842898 | MS.gene55323:intron | 20.0% |
| !!! | TGATTTATTAAAAGTATGCA+TGG | - | chr5.2:32845231-32845250 | None:intergenic | 20.0% |
| !!! | TTACTATTCCTAGATATTTT+AGG | + | chr5.2:32840952-32840971 | MS.gene55323:intron | 20.0% |
| !!! | TTTTATATGTATTCCTAGAA+TGG | + | chr5.2:32842062-32842081 | MS.gene55323:intron | 20.0% |
| !!! | TTTTCTATTCCTAGATTTTT+AGG | + | chr5.2:32840855-32840874 | MS.gene55323:intron | 20.0% |
| !!! | TTTTGTAACAATTTTTAGGA+TGG | + | chr5.2:32841805-32841824 | MS.gene55323:intron | 20.0% |
| ! | AAAACAGCATAATCAGAATA+TGG | - | chr5.2:32842539-32842558 | None:intergenic | 25.0% |
| ! | AAAACTATAGTTATGAGGAA+GGG | - | chr5.2:32843350-32843369 | None:intergenic | 25.0% |
| ! | AAATTTGTCATTATATGTGG+AGG | + | chr5.2:32842208-32842227 | MS.gene55323:intron | 25.0% |
| ! | AAGAAATATACCTAAGTTTG+AGG | + | chr5.2:32843710-32843729 | MS.gene55323:CDS | 25.0% |
| ! | AATCAAAACTTAAGTCCATT+TGG | - | chr5.2:32842408-32842427 | None:intergenic | 25.0% |
| ! | ACATAATTCCTTTACATAAG+TGG | + | chr5.2:32841609-32841628 | MS.gene55323:intron | 25.0% |
| ! | CAATATTCACAAATTTCCTA+TGG | - | chr5.2:32843103-32843122 | None:intergenic | 25.0% |
| ! | CACTTCATACATATATATTC+AGG | + | chr5.2:32842369-32842388 | MS.gene55323:intron | 25.0% |
| ! | CAGTTAGATGTATTTGTATT+TGG | + | chr5.2:32844634-32844653 | MS.gene55323:intron | 25.0% |
| ! | GAAAACCTTTCATGATATAA+AGG | - | chr5.2:32845025-32845044 | None:intergenic | 25.0% |
| ! | GAATAATATCCCAAAATCAA+TGG | + | chr5.2:32842149-32842168 | MS.gene55323:intron | 25.0% |
| ! | GGGTTATATTATTTGATGTT+TGG | + | chr5.2:32842972-32842991 | MS.gene55323:intron | 25.0% |
| ! | TAAGTTTGACCATAAACAAA+AGG | + | chr5.2:32841289-32841308 | MS.gene55323:intron | 25.0% |
| ! | TAGACAAAACTATAGTTATG+AGG | - | chr5.2:32843355-32843374 | None:intergenic | 25.0% |
| ! | TATAAAATAGATACCTGTCT+AGG | + | chr5.2:32843884-32843903 | MS.gene55323:intron | 25.0% |
| ! | TGCATATATTATCAGCTATT+TGG | - | chr5.2:32842021-32842040 | None:intergenic | 25.0% |
| ! | TGTTTGAAAATCATTACTAG+TGG | + | chr5.2:32844366-32844385 | MS.gene55323:intron | 25.0% |
| ! | TTAACAACACTGATGTTATA+TGG | - | chr5.2:32843044-32843063 | None:intergenic | 25.0% |
| ! | TTATTCGATTCTGTTAGTAA+CGG | + | chr5.2:32841775-32841794 | MS.gene55323:intron | 25.0% |
| ! | TTCTGTTAAATAATGTTTCC+GGG | + | chr5.2:32844829-32844848 | MS.gene55323:intron | 25.0% |
| !! | AAACATATAGCCTTCTTTTA+GGG | - | chr5.2:32845151-32845170 | None:intergenic | 25.0% |
| !! | AAAGATTAGTTAGGATATTG+TGG | - | chr5.2:32844216-32844235 | None:intergenic | 25.0% |
| !! | ACTTGACTTAAAGATTAGTT+AGG | - | chr5.2:32844225-32844244 | None:intergenic | 25.0% |
| !! | ATAACATCAGTGTTGTTAAA+TGG | + | chr5.2:32843045-32843064 | MS.gene55323:intron | 25.0% |
| !! | TATTGAGATATCTTTTTCCT+TGG | + | chr5.2:32843185-32843204 | MS.gene55323:intron | 25.0% |
| !! | TTTTATTCCAGCATATAGTA+GGG | + | chr5.2:32842952-32842971 | MS.gene55323:intron | 25.0% |
| !! | TTTTGACATAACTACTCAAA+AGG | - | chr5.2:32844168-32844187 | None:intergenic | 25.0% |
| !!! | AAAACTGAAACCATTGATTT+TGG | - | chr5.2:32842162-32842181 | None:intergenic | 25.0% |
| !!! | AAACTGAAACCATTGATTTT+GGG | - | chr5.2:32842161-32842180 | None:intergenic | 25.0% |
| !!! | AGAACTGACTTTTATTTCTT+AGG | + | chr5.2:32843480-32843499 | MS.gene55323:intron | 25.0% |
| !!! | ATAACTACTCAAAAGGTATT+AGG | - | chr5.2:32844161-32844180 | None:intergenic | 25.0% |
| !!! | ATGTTGATTTTCAATGTTAC+TGG | + | chr5.2:32841952-32841971 | MS.gene55323:intron | 25.0% |
| !!! | CCCATTTCATTTTATTTTAG+TGG | - | chr5.2:32844319-32844338 | None:intergenic | 25.0% |
| !!! | TTCTGTCTTTGATTTTGTTA+TGG | + | chr5.2:32845091-32845110 | MS.gene55323:intron | 25.0% |
| !!! | TTTTAGGATTTATTCCATGT+TGG | + | chr5.2:32842925-32842944 | MS.gene55323:intron | 25.0% |
| AAACTTTCTTACATCTGATC+TGG | - | chr5.2:32842614-32842633 | None:intergenic | 30.0% | |
| AACACACATACACTAGATAT+TGG | + | chr5.2:32841545-32841564 | MS.gene55323:intron | 30.0% | |
| AACAGGTTATAAAACCAGAA+TGG | - | chr5.2:32841985-32842004 | None:intergenic | 30.0% | |
| AACTAATATAATAGGGACCA+AGG | + | chr5.2:32841141-32841160 | MS.gene55323:intron | 30.0% | |
| AATATAACCCTACTATATGC+TGG | - | chr5.2:32842962-32842981 | None:intergenic | 30.0% | |
| AATATGCACCACTTATGTAA+AGG | - | chr5.2:32841620-32841639 | None:intergenic | 30.0% | |
| AATTATGCCTTTGGATGAAT+AGG | + | chr5.2:32844424-32844443 | MS.gene55323:intron | 30.0% | |
| ACAGGTTATAAAACCAGAAT+GGG | - | chr5.2:32841984-32842003 | None:intergenic | 30.0% | |
| ACAGTTATCATGAATGTTGA+GGG | + | chr5.2:32843996-32844015 | MS.gene55323:intron | 30.0% | |
| ATAGCATTTATCTGATCCTA+TGG | - | chr5.2:32842505-32842524 | None:intergenic | 30.0% | |
| ATGAATAGGATATCTCCAAA+TGG | + | chr5.2:32844438-32844457 | MS.gene55323:intron | 30.0% | |
| ATGGAAACTTCTATACTTTG+TGG | + | chr5.2:32841055-32841074 | MS.gene55323:intron | 30.0% | |
| ATTTCACCTAGAAATGATAG+TGG | + | chr5.2:32841657-32841676 | MS.gene55323:intron | 30.0% | |
| CAAAACTATAGTTATGAGGA+AGG | - | chr5.2:32843351-32843370 | None:intergenic | 30.0% | |
| CTAATAATTCTTCACTTTGC+AGG | + | chr5.2:32844892-32844911 | MS.gene55323:intron | 30.0% | |
| CTAGTCTATTCGTTATGAAA+CGG | - | chr5.2:32842472-32842491 | None:intergenic | 30.0% | |
| CTATAATATGAGACATTGTC+AGG | - | chr5.2:32843948-32843967 | None:intergenic | 30.0% | |
| CTGCAAAGTGAAGAATTATT+AGG | - | chr5.2:32844894-32844913 | None:intergenic | 30.0% | |
| CTTTCAACCCAGTATTTATT+AGG | - | chr5.2:32841877-32841896 | None:intergenic | 30.0% | |
| GAAAAATTACATGATGGTCA+GGG | - | chr5.2:32845446-32845465 | None:intergenic | 30.0% | |
| GATACTGTTAGCAAAACATT+TGG | + | chr5.2:32843003-32843022 | MS.gene55323:intron | 30.0% | |
| TAAAATGAAATGGGTACACT+CGG | + | chr5.2:32844325-32844344 | MS.gene55323:intron | 30.0% | |
| TAATGCACTTATAAACTCAG+AGG | + | chr5.2:32845547-32845566 | MS.gene55323:CDS | 30.0% | |
| TAGTCTATTCGTTATGAAAC+GGG | - | chr5.2:32842471-32842490 | None:intergenic | 30.0% | |
| TATACCAATCACAAGAAGAT+TGG | + | chr5.2:32844121-32844140 | MS.gene55323:intron | 30.0% | |
| TATATGTATGAAGTGTGCTA+AGG | - | chr5.2:32842364-32842383 | None:intergenic | 30.0% | |
| TATATGTTTGAGTGTTCAAC+TGG | + | chr5.2:32845162-32845181 | MS.gene55323:CDS | 30.0% | |
| TATGCATACACAATAATCTG+TGG | - | chr5.2:32844695-32844714 | None:intergenic | 30.0% | |
| TATTCACAAATTTCCTATGG+TGG | - | chr5.2:32843100-32843119 | None:intergenic | 30.0% | |
| TGAAAAATTACATGATGGTC+AGG | - | chr5.2:32845447-32845466 | None:intergenic | 30.0% | |
| TGAATAGGATATCTCCAAAT+GGG | + | chr5.2:32844439-32844458 | MS.gene55323:intron | 30.0% | |
| TGATGTGATTTCTGTAATGA+AGG | + | chr5.2:32841828-32841847 | MS.gene55323:CDS | 30.0% | |
| TGGAAACTTCTATACTTTGT+GGG | + | chr5.2:32841056-32841075 | MS.gene55323:intron | 30.0% | |
| TGGAATAAAACAATCCAACA+TGG | - | chr5.2:32842942-32842961 | None:intergenic | 30.0% | |
| TTAGTGAATCCAAGAGATTT+GGG | - | chr5.2:32844532-32844551 | None:intergenic | 30.0% | |
| TTATAAAACCAGAATGGGAT+AGG | - | chr5.2:32841979-32841998 | None:intergenic | 30.0% | |
| TTGAAAAACGATGTTTGCAT+TGG | + | chr5.2:32840905-32840924 | MS.gene55323:intron | 30.0% | |
| TTTAGTGAATCCAAGAGATT+TGG | - | chr5.2:32844533-32844552 | None:intergenic | 30.0% | |
| TTTATACACACCTCAAACTT+AGG | - | chr5.2:32843723-32843742 | None:intergenic | 30.0% | |
| ! | AATCATTTTGTTCTTAGGCA+GGG | - | chr5.2:32841092-32841111 | None:intergenic | 30.0% |
| ! | ACTTGACATGTAATTTGTGT+TGG | + | chr5.2:32842235-32842254 | MS.gene55323:intron | 30.0% |
| ! | AGAAGTTGTATGTTGTTTGT+AGG | + | chr5.2:32845258-32845277 | MS.gene55323:intron | 30.0% |
| ! | AGTCCTTAATGTTGACTAAA+AGG | + | chr5.2:32843297-32843316 | MS.gene55323:intron | 30.0% |
| ! | ATATCATGAAAGGTTTTCTC+TGG | + | chr5.2:32845027-32845046 | MS.gene55323:intron | 30.0% |
| ! | ATTTGTGCAGAATTTTCTTG+TGG | + | chr5.2:32843629-32843648 | MS.gene55323:intron | 30.0% |
| ! | CAAACATATAGCCTTCTTTT+AGG | - | chr5.2:32845152-32845171 | None:intergenic | 30.0% |
| ! | GACACAAGAGTATGTTTATA+TGG | + | chr5.2:32843144-32843163 | MS.gene55323:intron | 30.0% |
| ! | GACATTTAAAATGTTTGCCA+TGG | + | chr5.2:32842257-32842276 | MS.gene55323:intron | 30.0% |
| ! | GTCCTTAATGTTGACTAAAA+GGG | + | chr5.2:32843298-32843317 | MS.gene55323:intron | 30.0% |
| ! | TAATCATTTTGTTCTTAGGC+AGG | - | chr5.2:32841093-32841112 | None:intergenic | 30.0% |
| ! | TATTTCTTAGGCTTGAGTTT+TGG | + | chr5.2:32843492-32843511 | MS.gene55323:intron | 30.0% |
| ! | TATTTTGTACAAGCTGTAAC+TGG | - | chr5.2:32841353-32841372 | None:intergenic | 30.0% |
| ! | TCAAACCATTTTGAATGAGA+AGG | + | chr5.2:32842287-32842306 | MS.gene55323:intron | 30.0% |
| ! | TCCTTAATGTTGACTAAAAG+GGG | + | chr5.2:32843299-32843318 | MS.gene55323:intron | 30.0% |
| ! | TCTGATTTGTATGTTGCATT+AGG | - | chr5.2:32841518-32841537 | None:intergenic | 30.0% |
| ! | TGAATTGTGCAAGTAGTTTT+AGG | + | chr5.2:32842738-32842757 | MS.gene55323:intron | 30.0% |
| ! | TTTCAGCCATTATTTTCTGT+TGG | - | chr5.2:32845586-32845605 | None:intergenic | 30.0% |
| !! | ATTCCTAGATTTTTAGGCTT+GGG | + | chr5.2:32840861-32840880 | MS.gene55323:intron | 30.0% |
| !! | GTTTTATTCCAGCATATAGT+AGG | + | chr5.2:32842951-32842970 | MS.gene55323:intron | 30.0% |
| !! | TATTCCTAGATTTTTAGGCT+TGG | + | chr5.2:32840860-32840879 | MS.gene55323:intron | 30.0% |
| !! | TTCCTAGATATTTTAGGCTT+TGG | + | chr5.2:32840958-32840977 | MS.gene55323:intron | 30.0% |
| !! | TTGAAATTGCTGTTTCATCT+AGG | + | chr5.2:32845487-32845506 | MS.gene55323:intron | 30.0% |
| !!! | GAGTTTTGGATAGAACATTA+TGG | + | chr5.2:32843506-32843525 | MS.gene55323:intron | 30.0% |
| !!! | GTATGTCTGTTTTTATAGGA+GGG | + | chr5.2:32844855-32844874 | MS.gene55323:intron | 30.0% |
| !!! | GTTGATTTGCCTTTTGTTTA+TGG | - | chr5.2:32841301-32841320 | None:intergenic | 30.0% |
| !!! | GTTGGTATGTCTGTTTTTAT+AGG | + | chr5.2:32844851-32844870 | MS.gene55323:intron | 30.0% |
| !!! | TAGATATTTTAGGCTTTGGA+GGG | + | chr5.2:32840962-32840981 | MS.gene55323:intron | 30.0% |
| AAAATGAAATGGGTACACTC+GGG | + | chr5.2:32844326-32844345 | MS.gene55323:intron | 35.0% | |
| AAACTTCTATACTTTGTGGG+TGG | + | chr5.2:32841059-32841078 | MS.gene55323:intron | 35.0% | |
| AACCCAGTATTTATTAGGCT+TGG | - | chr5.2:32841872-32841891 | None:intergenic | 35.0% | |
| AACTCTTGAACCCTCTATTT+CGG | + | chr5.2:32843452-32843471 | MS.gene55323:intron | 35.0% | |
| AACTTAAGTCCATTTGGAGA+TGG | - | chr5.2:32842402-32842421 | None:intergenic | 35.0% | |
| AAGGGGAATTAGCAATTACA+TGG | + | chr5.2:32843316-32843335 | MS.gene55323:intron | 35.0% | |
| AAGTATGCATGGACAGAAAA+AGG | - | chr5.2:32845220-32845239 | None:intergenic | 35.0% | |
| AATGGTTTGAAAGAGATCCA+TGG | - | chr5.2:32842277-32842296 | None:intergenic | 35.0% | |
| ACAAACCAGACTATTAAGCT+TGG | + | chr5.2:32840682-32840701 | MS.gene55323:CDS | 35.0% | |
| ACAAGCAATTCACGTGTTAT+AGG | - | chr5.2:32843424-32843443 | None:intergenic | 35.0% | |
| ACATGGAATGTGAAAACTAG+AGG | - | chr5.2:32845386-32845405 | None:intergenic | 35.0% | |
| ACCTACTTTAGCATTTCTAC+CGG | + | chr5.2:32843662-32843681 | MS.gene55323:CDS | 35.0% | |
| ACTATGAGTAATGAGAGTCT+AGG | - | chr5.2:32843785-32843804 | None:intergenic | 35.0% | |
| ATCATTACTAGTGGTGTATG+TGG | + | chr5.2:32844375-32844394 | MS.gene55323:intron | 35.0% | |
| CAATTCACGTGTTATAGGTT+AGG | - | chr5.2:32843419-32843438 | None:intergenic | 35.0% | |
| CACAGTTATCATGAATGTTG+AGG | + | chr5.2:32843995-32844014 | MS.gene55323:intron | 35.0% | |
| CAGCATAATCAGAATATGGA+AGG | - | chr5.2:32842535-32842554 | None:intergenic | 35.0% | |
| CAGTTATCATGAATGTTGAG+GGG | + | chr5.2:32843997-32844016 | MS.gene55323:intron | 35.0% | |
| CTCCAAAGCCTAAAATATCT+AGG | - | chr5.2:32840963-32840982 | None:intergenic | 35.0% | |
| CTCCAAGCCTAATAAATACT+GGG | + | chr5.2:32841867-32841886 | MS.gene55323:CDS | 35.0% | |
| CTTGGTCTAAATTATGCCTT+TGG | + | chr5.2:32844415-32844434 | MS.gene55323:intron | 35.0% | |
| GAATAGGATATCTCCAAATG+GGG | + | chr5.2:32844440-32844459 | MS.gene55323:intron | 35.0% | |
| GACTACCTTCTCATTCAAAA+TGG | - | chr5.2:32842295-32842314 | None:intergenic | 35.0% | |
| GAGAAATAAGTATCCTAGAC+AGG | - | chr5.2:32843900-32843919 | None:intergenic | 35.0% | |
| GAGATATCCTATTCATCCAA+AGG | - | chr5.2:32844434-32844453 | None:intergenic | 35.0% | |
| GAGTAGGTTCAAGTATTTCT+TGG | + | chr5.2:32844397-32844416 | MS.gene55323:intron | 35.0% | |
| GCAATGTACTAATCTGACTT+GGG | - | chr5.2:32843222-32843241 | None:intergenic | 35.0% | |
| GCTAATAACTAAACCCCATT+TGG | - | chr5.2:32844456-32844475 | None:intergenic | 35.0% | |
| GGTTGAAAGTTCTCAAAAGA+GGG | + | chr5.2:32841888-32841907 | MS.gene55323:CDS | 35.0% | |
| GTCCAGTACTTGATACTTTA+GGG | + | chr5.2:32845300-32845319 | MS.gene55323:CDS | 35.0% | |
| GTTAAATAATGTTTCCGGGT+TGG | + | chr5.2:32844833-32844852 | MS.gene55323:intron | 35.0% | |
| GTTTCCATTCTACAACAAGA+GGG | + | chr5.2:32842102-32842121 | MS.gene55323:intron | 35.0% | |
| TAAAAACAGACATACCAACC+CGG | - | chr5.2:32844850-32844869 | None:intergenic | 35.0% | |
| TAATTCTTCACTTTGCAGGT+TGG | + | chr5.2:32844896-32844915 | MS.gene55323:intron | 35.0% | |
| TAGACTTTACCAGCAATAAC+TGG | + | chr5.2:32841377-32841396 | MS.gene55323:intron | 35.0% | |
| TATATAGTTTAGCCCAATGC+TGG | - | chr5.2:32842438-32842457 | None:intergenic | 35.0% | |
| TCATACAAAAATTCGAGCAG+AGG | - | chr5.2:32841476-32841495 | None:intergenic | 35.0% | |
| TCCATACTTGGTATCTTCTT+AGG | + | chr5.2:32841711-32841730 | MS.gene55323:intron | 35.0% | |
| TCCTAAGAAGATACCAAGTA+TGG | - | chr5.2:32841715-32841734 | None:intergenic | 35.0% | |
| TCTCCAAGCCTAATAAATAC+TGG | + | chr5.2:32841866-32841885 | MS.gene55323:CDS | 35.0% | |
| TCTTTACTCATCTCCATACT+TGG | + | chr5.2:32841699-32841718 | MS.gene55323:intron | 35.0% | |
| TGATAAAAACGAGTGTCTAC+AGG | - | chr5.2:32840830-32840849 | None:intergenic | 35.0% | |
| TGGTGTCCAACAGAAAATAA+TGG | + | chr5.2:32845577-32845596 | MS.gene55323:CDS | 35.0% | |
| TGTCCAGTACTTGATACTTT+AGG | + | chr5.2:32845299-32845318 | MS.gene55323:CDS | 35.0% | |
| TGTTTCCATTCTACAACAAG+AGG | + | chr5.2:32842101-32842120 | MS.gene55323:intron | 35.0% | |
| TTGGCTGAAAATAGAGAAAC+AGG | - | chr5.2:32842002-32842021 | None:intergenic | 35.0% | |
| ! | ACATCAGTGTTGTTAAATGG+TGG | + | chr5.2:32843048-32843067 | MS.gene55323:intron | 35.0% |
| ! | AGTTCTTTTCACCGAAATAG+AGG | - | chr5.2:32843466-32843485 | None:intergenic | 35.0% |
| ! | CACACAATTTGGAACTCTAA+AGG | - | chr5.2:32841026-32841045 | None:intergenic | 35.0% |
| ! | CTAGGATACTTATTTCTCTG+TGG | + | chr5.2:32843902-32843921 | MS.gene55323:intron | 35.0% |
| ! | CTGCTCGAATTTTTGTATGA+TGG | + | chr5.2:32841476-32841495 | MS.gene55323:intron | 35.0% |
| ! | GACTAGCAATGTTTTTCCAT+AGG | + | chr5.2:32842486-32842505 | MS.gene55323:intron | 35.0% |
| ! | GTCAGGACTAATTCTAGAAA+AGG | - | chr5.2:32843931-32843950 | None:intergenic | 35.0% |
| ! | GTTCTTTTCACCGAAATAGA+GGG | - | chr5.2:32843465-32843484 | None:intergenic | 35.0% |
| ! | TCCCCTTTTAGTCAACATTA+AGG | - | chr5.2:32843303-32843322 | None:intergenic | 35.0% |
| ! | TGATTTTCCTTTCCAGCATT+GGG | + | chr5.2:32842423-32842442 | MS.gene55323:intron | 35.0% |
| ! | TTCCCTAAAGTATCAAGTAC+TGG | - | chr5.2:32845305-32845324 | None:intergenic | 35.0% |
| ! | TTGATTTTCCTTTCCAGCAT+TGG | + | chr5.2:32842422-32842441 | MS.gene55323:intron | 35.0% |
| !! | ATAAACTCAGAGGTATTGAG+TGG | + | chr5.2:32845557-32845576 | MS.gene55323:CDS | 35.0% |
| !! | CTAGATATTTTAGGCTTTGG+AGG | + | chr5.2:32840961-32840980 | MS.gene55323:intron | 35.0% |
| !! | CTTTAGAGTTCCAAATTGTG+TGG | + | chr5.2:32841024-32841043 | MS.gene55323:intron | 35.0% |
| !! | TACCAGTTTTAACAGACAAG+AGG | - | chr5.2:32844279-32844298 | None:intergenic | 35.0% |
| !!! | AGATATTTTAGGCTTTGGAG+GGG | + | chr5.2:32840963-32840982 | MS.gene55323:intron | 35.0% |
| !!! | GGTATGTCTGTTTTTATAGG+AGG | + | chr5.2:32844854-32844873 | MS.gene55323:intron | 35.0% |
| AAACATACTCTTGTGTCCCA+TGG | - | chr5.2:32843141-32843160 | None:intergenic | 40.0% | |
| AAATTGTGTGGAGCTGACTA+TGG | + | chr5.2:32841036-32841055 | MS.gene55323:intron | 40.0% | |
| AACAGAAACAAGGGAATGAC+AGG | - | chr5.2:32844816-32844835 | None:intergenic | 40.0% | |
| AACCAGACTATTAAGCTTGG+AGG | + | chr5.2:32840685-32840704 | MS.gene55323:CDS | 40.0% | |
| ACACAAATACAAGCCCATGA+TGG | + | chr5.2:32843374-32843393 | MS.gene55323:intron | 40.0% | |
| ACCAATCACAAGAAGATTGG+AGG | + | chr5.2:32844124-32844143 | MS.gene55323:intron | 40.0% | |
| ACCACTCTGAATTACCATCA+TGG | - | chr5.2:32843391-32843410 | None:intergenic | 40.0% | |
| ACCGGTAGAAATGCTAAAGT+AGG | - | chr5.2:32843666-32843685 | None:intergenic | 40.0% | |
| ACCTCCAATCTTCTTGTGAT+TGG | - | chr5.2:32844128-32844147 | None:intergenic | 40.0% | |
| AGGATATTGTGGCAAGTAAC+TGG | - | chr5.2:32844205-32844224 | None:intergenic | 40.0% | |
| ATAGTCAGCTCCACACAATT+TGG | - | chr5.2:32841037-32841056 | None:intergenic | 40.0% | |
| ATATCAACCCTCTTCGTTCA+AGG | - | chr5.2:32841254-32841273 | None:intergenic | 40.0% | |
| CAGTCATATCAGTCCATTCT+AGG | - | chr5.2:32842078-32842097 | None:intergenic | 40.0% | |
| CCACTCTGAATTACCATCAT+GGG | - | chr5.2:32843390-32843409 | None:intergenic | 40.0% | |
| GAGCATCCACTATCATTTCT+AGG | - | chr5.2:32841666-32841685 | None:intergenic | 40.0% | |
| GATAGTTGTAGATGGAGATG+AGG | - | chr5.2:32845519-32845538 | None:intergenic | 40.0% | |
| GCTACGATGATAGTTGTAGA+TGG | - | chr5.2:32845527-32845546 | None:intergenic | 40.0% | |
| GGAAGAAAACCATCTCCAAA+TGG | + | chr5.2:32842390-32842409 | MS.gene55323:intron | 40.0% | |
| GGCAATGTACTAATCTGACT+TGG | - | chr5.2:32843223-32843242 | None:intergenic | 40.0% | |
| GGGTGAGTATATAAGTGTGA+AGG | + | chr5.2:32841908-32841927 | MS.gene55323:intron | 40.0% | |
| GGGTTGAAAGTTCTCAAAAG+AGG | + | chr5.2:32841887-32841906 | MS.gene55323:CDS | 40.0% | |
| GTGATTTCTGTAATGAAGGC+TGG | + | chr5.2:32841832-32841851 | MS.gene55323:CDS | 40.0% | |
| TAAGGAATTGCCTTCAATGC+TGG | + | chr5.2:32841168-32841187 | MS.gene55323:intron | 40.0% | |
| TAGAGGGTTCAAGAGTTGAA+TGG | - | chr5.2:32843449-32843468 | None:intergenic | 40.0% | |
| TATTCGTTATGAAACGGGCA+AGG | - | chr5.2:32842466-32842485 | None:intergenic | 40.0% | |
| TGCCTCTTGTCTGTTAAAAC+TGG | + | chr5.2:32844274-32844293 | MS.gene55323:intron | 40.0% | |
| TGTTATGGTGTTTAGCCAGT+GGG | + | chr5.2:32845106-32845125 | MS.gene55323:intron | 40.0% | |
| TTCTATACTTTGTGGGTGGT+GGG | + | chr5.2:32841063-32841082 | MS.gene55323:intron | 40.0% | |
| TTGCAGGACAGAACAAAAGA+GGG | - | chr5.2:32844781-32844800 | None:intergenic | 40.0% | |
| TTGTTATGGTGTTTAGCCAG+TGG | + | chr5.2:32845105-32845124 | MS.gene55323:intron | 40.0% | |
| TTTCTGTAATGAAGGCTGGA+AGG | + | chr5.2:32841836-32841855 | MS.gene55323:CDS | 40.0% | |
| TTTGCAGGACAGAACAAAAG+AGG | - | chr5.2:32844782-32844801 | None:intergenic | 40.0% | |
| TTTGCATAGCCAGTTATTGC+TGG | - | chr5.2:32841389-32841408 | None:intergenic | 40.0% | |
| ! | GTGTTGTTAAATGGTGGTCA+TGG | + | chr5.2:32843054-32843073 | MS.gene55323:intron | 40.0% |
| ! | TATCATGCAACCAGCATTGA+AGG | - | chr5.2:32841181-32841200 | None:intergenic | 40.0% |
| ! | TTAGCCCTCTTGTTGTAGAA+TGG | - | chr5.2:32842109-32842128 | None:intergenic | 40.0% |
| ! | TTCAATGCTGGTTGCATGAT+AGG | + | chr5.2:32841180-32841199 | MS.gene55323:intron | 40.0% |
| ! | TTGGTGCTTTGCTTTATGTG+CGG | + | chr5.2:32844915-32844934 | MS.gene55323:CDS | 40.0% |
| !! | AGTATCAAGTACTGGACATG+TGG | - | chr5.2:32845297-32845316 | None:intergenic | 40.0% |
| !! | CTAGATTTTTAGGCTTGGGA+GGG | + | chr5.2:32840865-32840884 | MS.gene55323:intron | 40.0% |
| !! | GTATCAAGTACTGGACATGT+GGG | - | chr5.2:32845296-32845315 | None:intergenic | 40.0% |
| !! | TAGATTTTTAGGCTTGGGAG+GGG | + | chr5.2:32840866-32840885 | MS.gene55323:intron | 40.0% |
| !!! | GATTTTTGGTCAACCACCAT+AGG | + | chr5.2:32843084-32843103 | MS.gene55323:intron | 40.0% |
| AAGAGATTTGGGTGGAGACA+TGG | - | chr5.2:32844521-32844540 | None:intergenic | 45.0% | |
| AAGAGGGCTAAAGTGGATGT+TGG | + | chr5.2:32842118-32842137 | MS.gene55323:intron | 45.0% | |
| AAGATGTGGCCAAGACTATG+AGG | + | chr5.2:32844597-32844616 | MS.gene55323:intron | 45.0% | |
| AATAGGGACCAAGGCTTGTA+AGG | + | chr5.2:32841150-32841169 | MS.gene55323:intron | 45.0% | |
| ACAATAATCTGTGGCCGTGT+GGG | - | chr5.2:32844686-32844705 | None:intergenic | 45.0% | |
| ACAGCTCAGGATTCATTCCA+GGG | - | chr5.2:32844955-32844974 | None:intergenic | 45.0% | |
| ACTAGTGGTGTATGTGGAGT+AGG | + | chr5.2:32844381-32844400 | MS.gene55323:intron | 45.0% | |
| AGAACTGAATCCTCTGCATG+CGG | - | chr5.2:32842574-32842593 | None:intergenic | 45.0% | |
| AGAGGCAAGATTTCTCAAGC+AGG | - | chr5.2:32844261-32844280 | None:intergenic | 45.0% | |
| AGATTAGTACATTGCCCCAG+AGG | + | chr5.2:32843227-32843246 | MS.gene55323:intron | 45.0% | |
| AGGATGTCCTTGAACGAAGA+GGG | + | chr5.2:32841244-32841263 | MS.gene55323:intron | 45.0% | |
| AGGCAATTCCTTACAAGCCT+TGG | - | chr5.2:32841161-32841180 | None:intergenic | 45.0% | |
| AGTTTAGCCCAATGCTGGAA+AGG | - | chr5.2:32842433-32842452 | None:intergenic | 45.0% | |
| ATCATGAATGTTGAGGGGCT+TGG | + | chr5.2:32844002-32844021 | MS.gene55323:intron | 45.0% | |
| ATGTCTCCACCCAAATCTCT+TGG | + | chr5.2:32844520-32844539 | MS.gene55323:intron | 45.0% | |
| CAGACTATTAAGCTTGGAGG+CGG | + | chr5.2:32840688-32840707 | MS.gene55323:CDS | 45.0% | |
| CATGCAGAGGATTCAGTTCT+TGG | + | chr5.2:32842574-32842593 | MS.gene55323:CDS | 45.0% | |
| CCCATGATGGTAATTCAGAG+TGG | + | chr5.2:32843387-32843406 | MS.gene55323:intron | 45.0% | |
| CCTCCCAAGCCTAAAAATCT+AGG | - | chr5.2:32840867-32840886 | None:intergenic | 45.0% | |
| CTACAACAAGAGGGCTAAAG+TGG | + | chr5.2:32842111-32842130 | MS.gene55323:intron | 45.0% | |
| CTGATGTAGAGCTATAAGCC+TGG | - | chr5.2:32843259-32843278 | None:intergenic | 45.0% | |
| CTTCTATACTTTGTGGGTGG+TGG | + | chr5.2:32841062-32841081 | MS.gene55323:intron | 45.0% | |
| CTTGGGTTTCAGAAACTCCA+AGG | - | chr5.2:32843205-32843224 | None:intergenic | 45.0% | |
| GAAGATTGGAGGTCAAACGT+TGG | + | chr5.2:32844135-32844154 | MS.gene55323:intron | 45.0% | |
| GTGAATCCAAGAGATTTGGG+TGG | - | chr5.2:32844529-32844548 | None:intergenic | 45.0% | |
| TAATGAAGGCTGGAAGGCTT+AGG | + | chr5.2:32841842-32841861 | MS.gene55323:CDS | 45.0% | |
| TAGGATGTCCTTGAACGAAG+AGG | + | chr5.2:32841243-32841262 | MS.gene55323:intron | 45.0% | |
| TCATGAATGTTGAGGGGCTT+GGG | + | chr5.2:32844003-32844022 | MS.gene55323:intron | 45.0% | |
| TGAATGGACGTGTTTGGGTA+TGG | + | chr5.2:32845354-32845373 | MS.gene55323:intron | 45.0% | |
| TGGCTTGAATGGACGTGTTT+GGG | + | chr5.2:32845349-32845368 | MS.gene55323:CDS | 45.0% | |
| TGGTGCTTTGCTTTATGTGC+GGG | + | chr5.2:32844916-32844935 | MS.gene55323:CDS | 45.0% | |
| TTACTGGTCCTATCCCATTC+TGG | + | chr5.2:32841968-32841987 | MS.gene55323:intron | 45.0% | |
| TTTGTGAATATTGCCCGCCA+TGG | + | chr5.2:32843110-32843129 | MS.gene55323:intron | 45.0% | |
| ! | AAAGTGGATGTTGGTGGGAT+GGG | + | chr5.2:32842127-32842146 | MS.gene55323:intron | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr5.2:32843555-32843574 | None:intergenic | 45.0% |
| ! | ACTGGTCTCTCAAGGATGTA+TGG | + | chr5.2:32845180-32845199 | MS.gene55323:intron | 45.0% |
| ! | AGTGTTCAACTGGTCTCTCA+AGG | + | chr5.2:32845172-32845191 | MS.gene55323:CDS | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr5.2:32843556-32843575 | None:intergenic | 45.0% |
| ! | TAAAGTGGATGTTGGTGGGA+TGG | + | chr5.2:32842126-32842145 | MS.gene55323:intron | 45.0% |
| ! | TTGGCTTGAATGGACGTGTT+TGG | + | chr5.2:32845348-32845367 | MS.gene55323:CDS | 45.0% |
| !! | CCTAGATTTTTAGGCTTGGG+AGG | + | chr5.2:32840864-32840883 | MS.gene55323:intron | 45.0% |
| !! | GAGATAGCTGTTGGCTTGAA+TGG | + | chr5.2:32845338-32845357 | MS.gene55323:CDS | 45.0% |
| !! | GAGTTTGGTGCCCTAAAAGA+AGG | + | chr5.2:32845138-32845157 | MS.gene55323:CDS | 45.0% |
| !!! | TATCTATTTTATATAAAAAA+GGG | - | chr5.2:32843877-32843896 | None:intergenic | 5.0% |
| AAACTCTCCAGCTTTCCCAC+TGG | - | chr5.2:32845124-32845143 | None:intergenic | 50.0% | |
| ACCATGCAACAAGCGTTCAC+AGG | - | chr5.2:32844487-32844506 | None:intergenic | 50.0% | |
| ACTAAGTGGGGTCGGATACA+TGG | - | chr5.2:32843543-32843562 | None:intergenic | 50.0% | |
| AGGGCTAAAGTGGATGTTGG+TGG | + | chr5.2:32842121-32842140 | MS.gene55323:intron | 50.0% | |
| AGTGGGAAAGCTGGAGAGTT+TGG | + | chr5.2:32845123-32845142 | MS.gene55323:CDS | 50.0% | |
| ATACGCCAGCCTCATAGTCT+TGG | - | chr5.2:32844609-32844628 | None:intergenic | 50.0% | |
| ATGTATCCGACCCCACTTAG+TGG | + | chr5.2:32843542-32843561 | MS.gene55323:intron | 50.0% | |
| CACAATAATCTGTGGCCGTG+TGG | - | chr5.2:32844687-32844706 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr5.2:32843554-32843573 | MS.gene55323:intron | 50.0% | |
| CCTCCTTCAAATGCAAGCAC+CGG | - | chr5.2:32843684-32843703 | None:intergenic | 50.0% | |
| CGCCTCCAAGCTTAATAGTC+TGG | - | chr5.2:32840690-32840709 | None:intergenic | 50.0% | |
| CGGGTTGTTAAAGCAATCCC+TGG | + | chr5.2:32844935-32844954 | MS.gene55323:CDS | 50.0% | |
| CTACCGGTGCTTGCATTTGA+AGG | + | chr5.2:32843678-32843697 | MS.gene55323:CDS | 50.0% | |
| CTCTCGTTCGAGATAGCTGT+TGG | + | chr5.2:32845329-32845348 | MS.gene55323:CDS | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr5.2:32843551-32843570 | None:intergenic | 50.0% | |
| GACAGCTCAGGATTCATTCC+AGG | - | chr5.2:32844956-32844975 | None:intergenic | 50.0% | |
| GGGAATGACAGGTCAAGTGT+TGG | - | chr5.2:32844805-32844824 | None:intergenic | 50.0% | |
| GGGCTAAAGTGGATGTTGGT+GGG | + | chr5.2:32842122-32842141 | MS.gene55323:intron | 50.0% | |
| GTTAAATGGTGGTCATGGCG+TGG | + | chr5.2:32843059-32843078 | MS.gene55323:intron | 50.0% | |
| TGTATCCGACCCCACTTAGT+GGG | + | chr5.2:32843543-32843562 | MS.gene55323:intron | 50.0% | |
| TGTTTAGCCAGTGGGAAAGC+TGG | + | chr5.2:32845114-32845133 | MS.gene55323:intron | 50.0% | |
| ! | AGCTGTCTTGCACTGATGGT+TGG | + | chr5.2:32844969-32844988 | MS.gene55323:intron | 50.0% |
| ! | ATAAGCCTGGAGTACTCCTC+TGG | - | chr5.2:32843246-32843265 | None:intergenic | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr5.2:32843557-32843576 | None:intergenic | 50.0% |
| ! | TAAGCCTGGAGTACTCCTCT+GGG | - | chr5.2:32843245-32843264 | None:intergenic | 50.0% |
| ! | TCCTGTGAACGCTTGTTGCA+TGG | + | chr5.2:32844483-32844502 | MS.gene55323:intron | 50.0% |
| !! | CAGGTCAAGTGTTGGTTTGC+AGG | - | chr5.2:32844797-32844816 | None:intergenic | 50.0% |
| AAATGGTGGTCATGGCGTGG+CGG | + | chr5.2:32843062-32843081 | MS.gene55323:intron | 55.0% | |
| ACAGTATGTGCCGCATGCAG+AGG | + | chr5.2:32842561-32842580 | MS.gene55323:intron | 55.0% | |
| CCATCAGTGCAAGACAGCTC+AGG | - | chr5.2:32844968-32844987 | None:intergenic | 55.0% | |
| CCGGTGCTTGCATTTGAAGG+AGG | + | chr5.2:32843681-32843700 | MS.gene55323:CDS | 55.0% | |
| CCTGAGCTGTCTTGCACTGA+TGG | + | chr5.2:32844965-32844984 | MS.gene55323:CDS | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr5.2:32843549-32843568 | MS.gene55323:intron | 55.0% | |
| GAATGTTGAGGGGCTTGGGT+AGG | + | chr5.2:32844007-32844026 | MS.gene55323:intron | 55.0% | |
| GGCTGAAAAGCTGCTGCAGA+GGG | + | chr5.2:32845598-32845617 | MS.gene55323:CDS | 55.0% | |
| GGTACACTCGGGATGCTCAT+GGG | + | chr5.2:32844337-32844356 | MS.gene55323:intron | 55.0% | |
| GTGAATATTGCCCGCCATGG+AGG | + | chr5.2:32843113-32843132 | MS.gene55323:intron | 55.0% | |
| TGGCTGAAAAGCTGCTGCAG+AGG | + | chr5.2:32845597-32845616 | MS.gene55323:CDS | 55.0% | |
| TGTGGCCAAGACTATGAGGC+TGG | + | chr5.2:32844601-32844620 | MS.gene55323:intron | 55.0% | |
| ! | AAGCCTGGAGTACTCCTCTG+GGG | - | chr5.2:32843244-32843263 | None:intergenic | 55.0% |
| !!! | GTCATGGCGTGGCGGATTTT+TGG | + | chr5.2:32843070-32843089 | MS.gene55323:intron | 55.0% |
| ACACTCGGGATGCTCATGGG+AGG | + | chr5.2:32844340-32844359 | MS.gene55323:intron | 60.0% | |
| CACTCGGGATGCTCATGGGA+GGG | + | chr5.2:32844341-32844360 | MS.gene55323:intron | 60.0% | |
| GGGTACACTCGGGATGCTCA+TGG | + | chr5.2:32844336-32844355 | MS.gene55323:intron | 60.0% | |
| TGTGTCCCATGGTGCCTCCA+TGG | - | chr5.2:32843130-32843149 | None:intergenic | 60.0% | |
| !! | TTGCCCCAGAGGAGTACTCC+AGG | + | chr5.2:32843238-32843257 | MS.gene55323:intron | 60.0% |
| GCTTGGAGGCGGTCTTCGTC+AGG | + | chr5.2:32840699-32840718 | MS.gene55323:CDS | 65.0% | |
| GGAGGCGGTCTTCGTCAGGT+AGG | + | chr5.2:32840703-32840722 | MS.gene55323:intron | 65.0% | |
| GTCCCATGGTGCCTCCATGG+CGG | - | chr5.2:32843127-32843146 | None:intergenic | 65.0% | |
| TCCCATGGTGCCTCCATGGC+GGG | - | chr5.2:32843126-32843145 | None:intergenic | 65.0% | |
| !! | GCCCGCCATGGAGGCACCAT+GGG | + | chr5.2:32843122-32843141 | MS.gene55323:intron | 70.0% |
| !! | TGCCCGCCATGGAGGCACCA+TGG | + | chr5.2:32843121-32843140 | MS.gene55323:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 32840679 | 32845628 | 32840679 | ID=MS.gene55323 |
| chr5.2 | mRNA | 32840679 | 32845628 | 32840679 | ID=MS.gene55323.t1;Parent=MS.gene55323 |
| chr5.2 | exon | 32840679 | 32840720 | 32840679 | ID=MS.gene55323.t1.exon1;Parent=MS.gene55323.t1 |
| chr5.2 | CDS | 32840679 | 32840720 | 32840679 | ID=cds.MS.gene55323.t1;Parent=MS.gene55323.t1 |
| chr5.2 | exon | 32841823 | 32841909 | 32841823 | ID=MS.gene55323.t1.exon2;Parent=MS.gene55323.t1 |
| chr5.2 | CDS | 32841823 | 32841909 | 32841823 | ID=cds.MS.gene55323.t1;Parent=MS.gene55323.t1 |
| chr5.2 | exon | 32842565 | 32842621 | 32842565 | ID=MS.gene55323.t1.exon3;Parent=MS.gene55323.t1 |
| chr5.2 | CDS | 32842565 | 32842621 | 32842565 | ID=cds.MS.gene55323.t1;Parent=MS.gene55323.t1 |
| chr5.2 | exon | 32843639 | 32843731 | 32843639 | ID=MS.gene55323.t1.exon4;Parent=MS.gene55323.t1 |
| chr5.2 | CDS | 32843639 | 32843731 | 32843639 | ID=cds.MS.gene55323.t1;Parent=MS.gene55323.t1 |
| chr5.2 | exon | 32844914 | 32844986 | 32844914 | ID=MS.gene55323.t1.exon5;Parent=MS.gene55323.t1 |
| chr5.2 | CDS | 32844914 | 32844986 | 32844914 | ID=cds.MS.gene55323.t1;Parent=MS.gene55323.t1 |
| chr5.2 | exon | 32845121 | 32845196 | 32845121 | ID=MS.gene55323.t1.exon6;Parent=MS.gene55323.t1 |
| chr5.2 | CDS | 32845121 | 32845196 | 32845121 | ID=cds.MS.gene55323.t1;Parent=MS.gene55323.t1 |
| chr5.2 | exon | 32845280 | 32845370 | 32845280 | ID=MS.gene55323.t1.exon7;Parent=MS.gene55323.t1 |
| chr5.2 | CDS | 32845280 | 32845370 | 32845280 | ID=cds.MS.gene55323.t1;Parent=MS.gene55323.t1 |
| chr5.2 | exon | 32845509 | 32845628 | 32845509 | ID=MS.gene55323.t1.exon8;Parent=MS.gene55323.t1 |
| chr5.2 | CDS | 32845509 | 32845628 | 32845509 | ID=cds.MS.gene55323.t1;Parent=MS.gene55323.t1 |
| Gene Sequence |
| Protein sequence |
