Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78555.t1 | XP_003613959.1 | 99.2 | 240 | 2 | 0 | 1 | 240 | 1 | 240 | 3.10E-129 | 471.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78555.t1 | Q7KWX9 | 44.7 | 215 | 114 | 3 | 14 | 227 | 6 | 216 | 2.6e-44 | 180.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78555.t1 | B7FLI0 | 99.2 | 240 | 2 | 0 | 1 | 240 | 1 | 240 | 2.2e-129 | 471.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene42834 | MS.gene78555 | PPI |
| MS.gene024471 | MS.gene78555 | PPI |
| MS.gene91519 | MS.gene78555 | PPI |
| MS.gene78555 | MS.gene53118 | PPI |
| MS.gene55323 | MS.gene78555 | PPI |
| MS.gene78555 | MS.gene021698 | PPI |
| MS.gene21656 | MS.gene78555 | PPI |
| MS.gene023858 | MS.gene78555 | PPI |
| MS.gene78555 | MS.gene058147 | PPI |
| MS.gene78555 | MS.gene024734 | PPI |
| MS.gene043239 | MS.gene78555 | PPI |
| MS.gene21912 | MS.gene78555 | PPI |
| MS.gene21710 | MS.gene78555 | PPI |
| MS.gene79599 | MS.gene78555 | PPI |
| MS.gene050621 | MS.gene78555 | PPI |
| MS.gene043576 | MS.gene78555 | PPI |
| MS.gene52227 | MS.gene78555 | PPI |
| MS.gene78555 | MS.gene31317 | PPI |
| MS.gene78555 | MS.gene22316 | PPI |
| MS.gene27712 | MS.gene78555 | PPI |
| MS.gene024674 | MS.gene78555 | PPI |
| MS.gene025936 | MS.gene78555 | PPI |
| MS.gene072735 | MS.gene78555 | PPI |
| MS.gene78555 | MS.gene041852 | PPI |
| MS.gene22822 | MS.gene78555 | PPI |
| MS.gene85900 | MS.gene78555 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78555.t1 | MTR_5g043110 | 99.167 | 240 | 2 | 0 | 1 | 240 | 1 | 240 | 4.57e-178 | 488 |
| MS.gene78555.t1 | MTR_5g009430 | 90.909 | 121 | 11 | 0 | 120 | 240 | 22 | 142 | 3.79e-76 | 227 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78555.t1 | AT4G32175 | 72.458 | 236 | 65 | 0 | 1 | 236 | 1 | 236 | 4.32e-127 | 360 |
| MS.gene78555.t1 | AT2G25355 | 70.711 | 239 | 70 | 0 | 1 | 239 | 1 | 239 | 1.54e-126 | 358 |
| MS.gene78555.t1 | AT2G25355 | 72.986 | 211 | 57 | 0 | 29 | 239 | 1 | 211 | 1.15e-115 | 330 |
Find 64 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCCTGTACTTGATACTTT+AGG | 0.243843 | 5.2:+32871620 | MS.gene78555:CDS |
| CATGCAGAGGATTCAGTTCT+TGG | 0.279048 | 5.2:+32869027 | MS.gene78555:CDS |
| GTCCTGTACTTGATACTTTA+GGG | 0.284685 | 5.2:+32871621 | MS.gene78555:CDS |
| TCTCCAAGCCTAATAAATAC+TGG | 0.308371 | 5.2:+32868328 | MS.gene78555:CDS |
| CTTTCAACCCAGTATTTATT+AGG | 0.326945 | 5.2:-32868336 | None:intergenic |
| AGTGGGAAAGCTGGAGAGTT+TGG | 0.365780 | 5.2:+32871444 | MS.gene78555:CDS |
| AACCCAGTATTTATTAGGCT+TGG | 0.381536 | 5.2:-32868331 | None:intergenic |
| CGCCTCCAAGCTTAATAGTC+TGG | 0.381633 | 5.2:-32867160 | None:intergenic |
| AAACTTTCTTACATCTGATC+TGG | 0.387573 | 5.2:-32869064 | None:intergenic |
| CTACCGGTGCTTGCATTTGA+AGG | 0.400781 | 5.2:+32869960 | MS.gene78555:CDS |
| GAGATAGCTGTTGGCTTGAA+TGG | 0.403935 | 5.2:+32871659 | MS.gene78555:CDS |
| TTGGCTTGAATGGACGTGTT+TGG | 0.414554 | 5.2:+32871669 | MS.gene78555:CDS |
| TAATGAAGGCTGGCAGGCTT+AGG | 0.414773 | 5.2:+32868304 | MS.gene78555:CDS |
| TTTATGCACACCTCAAACTT+AGG | 0.416349 | 5.2:-32870002 | None:intergenic |
| TATATGTTTGAGTGTTCAAC+TGG | 0.417882 | 5.2:+32871483 | MS.gene78555:CDS |
| AAGAAATATACCTAAGTTTG+AGG | 0.419667 | 5.2:+32869992 | MS.gene78555:CDS |
| TGGCTTGAATGGACGTGTTT+GGG | 0.428587 | 5.2:+32871670 | MS.gene78555:CDS |
| GCTTGGAGGCGGTCTTCGTC+AGG | 0.443385 | 5.2:+32867172 | MS.gene78555:CDS |
| GAAAGCTCAGGATTCATTCC+AGG | 0.447953 | 5.2:-32871267 | None:intergenic |
| AAATTTCGTAGATCAATTAG+TGG | 0.470821 | 5.2:+32867007 | MS.gene78555:CDS |
| TGTTTAGCCAGTGGGAAAGC+TGG | 0.480143 | 5.2:+32871435 | MS.gene78555:intron |
| GCTACGATGATAGTTGTAGA+TGG | 0.480268 | 5.2:-32871845 | None:intergenic |
| CTCCAAGCCTAATAAATACT+GGG | 0.501954 | 5.2:+32868329 | MS.gene78555:CDS |
| TTCCCTAAAGTATCAAGTAC+AGG | 0.507293 | 5.2:-32871623 | None:intergenic |
| AGGTCAAGAACCACATCGCC+AGG | 0.509218 | 5.2:-32867122 | None:intergenic |
| TTTCTGTAATGAAGGCTGGC+AGG | 0.512573 | 5.2:+32868298 | MS.gene78555:CDS |
| TGGTGTCCAACAGAAAATAA+TGG | 0.517813 | 5.2:+32871898 | MS.gene78555:CDS |
| ACCTACTTTAGCATTTCTAC+CGG | 0.519125 | 5.2:+32869944 | MS.gene78555:CDS |
| CTCTCGTTCGAGATAGCTGT+TGG | 0.520750 | 5.2:+32871650 | MS.gene78555:CDS |
| AGTGTTCAACTGGTCTCTCA+AGG | 0.524837 | 5.2:+32871493 | MS.gene78555:CDS |
| TGGTGCTTTGCTTTATGTGC+GGG | 0.527438 | 5.2:+32871230 | MS.gene78555:CDS |
| CGGGTTGTTAAAGCAATCCC+TGG | 0.528699 | 5.2:+32871249 | MS.gene78555:CDS |
| GAGTTTGGTGCCCTAAAAGA+AGG | 0.530680 | 5.2:+32871459 | MS.gene78555:CDS |
| GGCTGAAAAGCTGCTGCAGA+GGG | 0.532622 | 5.2:+32871919 | MS.gene78555:CDS |
| AACCAGACTATTAAGCTTGG+AGG | 0.540367 | 5.2:+32867158 | MS.gene78555:CDS |
| CCATCCGTGCATGAAAGCTC+AGG | 0.542269 | 5.2:-32871279 | None:intergenic |
| CCTGAGCTTTCATGCACGGA+TGG | 0.549458 | 5.2:+32871279 | MS.gene78555:CDS |
| ACAAACCAGACTATTAAGCT+TGG | 0.554569 | 5.2:+32867155 | MS.gene78555:CDS |
| GGGTTGAAAGTTCTCAAAAG+AGG | 0.554866 | 5.2:+32868349 | MS.gene78555:CDS |
| CTTAATAGTCTGGTTTGTCA+TGG | 0.554995 | 5.2:-32867150 | None:intergenic |
| GAAATGGAAAGTAAATCTGC+TGG | 0.563734 | 5.2:+32866975 | None:intergenic |
| AGTATCAAGTACAGGACATG+TGG | 0.572780 | 5.2:-32871615 | None:intergenic |
| AAAGCTCAGGATTCATTCCA+GGG | 0.572903 | 5.2:-32871266 | None:intergenic |
| GTGATTTCTGTAATGAAGGC+TGG | 0.578880 | 5.2:+32868294 | MS.gene78555:CDS |
| GAATCCTGAGCTTTCATGCA+CGG | 0.588610 | 5.2:+32871275 | MS.gene78555:CDS |
| TGATGTGATTTCTGTAATGA+AGG | 0.589317 | 5.2:+32868290 | MS.gene78555:CDS |
| TGGCTGAAAAGCTGCTGCAG+AGG | 0.589536 | 5.2:+32871918 | MS.gene78555:CDS |
| CCTCCTTCAAATGCAAGCAC+CGG | 0.589684 | 5.2:-32869963 | None:intergenic |
| AAACTCTCCAGCTTTCCCAC+TGG | 0.590205 | 5.2:-32871442 | None:intergenic |
| GGTTGAAAGTTCTCAAAAGA+GGG | 0.594216 | 5.2:+32868350 | MS.gene78555:CDS |
| ACAGTATGTGCCGCATGCAG+AGG | 0.603783 | 5.2:+32869014 | MS.gene78555:intron |
| ACCGGTAGAAATGCTAAAGT+AGG | 0.604930 | 5.2:-32869945 | None:intergenic |
| GATAGTTGTAGATGGAGATG+AGG | 0.610158 | 5.2:-32871837 | None:intergenic |
| TTGGTGCTTTGCTTTATGTG+CGG | 0.616378 | 5.2:+32871229 | MS.gene78555:CDS |
| CCGGTGCTTGCATTTGAAGG+AGG | 0.619754 | 5.2:+32869963 | MS.gene78555:CDS |
| CAGACTATTAAGCTTGGAGG+CGG | 0.619906 | 5.2:+32867161 | MS.gene78555:CDS |
| TCTGGTTTGTCATGGTAGAG+AGG | 0.621859 | 5.2:-32867142 | None:intergenic |
| ATGGTGTATGTTTAGCCAGT+GGG | 0.625560 | 5.2:+32871427 | MS.gene78555:intron |
| TTTGTAGTATCCTGGCGATG+TGG | 0.632913 | 5.2:+32867112 | MS.gene78555:intron |
| TTGATCTACGAAATTTGTAG+CGG | 0.645286 | 5.2:-32867000 | None:intergenic |
| GTATCAAGTACAGGACATGT+GGG | 0.672926 | 5.2:-32871614 | None:intergenic |
| ATAAACTCAGAGGTATTGAG+TGG | 0.675537 | 5.2:+32871878 | MS.gene78555:CDS |
| TAATGCACTTATAAACTCAG+AGG | 0.703003 | 5.2:+32871868 | MS.gene78555:CDS |
| AGAACTGAATCCTCTGCATG+CGG | 0.725568 | 5.2:-32869024 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTATCTATTTTATATAAAAA+AGG | - | chr5.2:32870160-32870179 | None:intergenic | 10.0% |
| !! | AAATAAAAATAGTCATGAAT+TGG | - | chr5.2:32869245-32869264 | None:intergenic | 15.0% |
| !! | CACTAAAATAAAATGAAAAT+GGG | + | chr5.2:32870606-32870625 | MS.gene78555:intron | 15.0% |
| !!! | AGTTTAATCATTTTTTTCTT+AGG | - | chr5.2:32867572-32867591 | None:intergenic | 15.0% |
| !!! | TTCATGACTATTTTTATTTT+AGG | + | chr5.2:32869246-32869265 | MS.gene78555:intron | 15.0% |
| !!! | TTGTTAAATGCAATTTTTAT+AGG | + | chr5.2:32869146-32869165 | MS.gene78555:intron | 15.0% |
| !!! | TTTTATTTTGTTTTAAGATG+TGG | + | chr5.2:32870862-32870881 | MS.gene78555:intron | 15.0% |
| !! | AAAAAAGAAATAATGCAACA+TGG | - | chr5.2:32871724-32871743 | None:intergenic | 20.0% |
| !! | AAACTAAAGTCTTCTAATAT+TGG | + | chr5.2:32871013-32871032 | MS.gene78555:intron | 20.0% |
| !! | CAAGAAAACCATTATATAAA+TGG | - | chr5.2:32867957-32867976 | None:intergenic | 20.0% |
| !! | CCACTAAAATAAAATGAAAA+TGG | + | chr5.2:32870605-32870624 | MS.gene78555:intron | 20.0% |
| !! | GAGTTTCAACTAATATAATA+GGG | + | chr5.2:32867609-32867628 | MS.gene78555:intron | 20.0% |
| !! | GTTAATAAAATTCATGTTTG+CGG | + | chr5.2:32867088-32867107 | MS.gene78555:intron | 20.0% |
| !! | TAACAAAATCAAAGATAGAA+TGG | - | chr5.2:32871408-32871427 | None:intergenic | 20.0% |
| !! | TAACATGAAAAATTACATGA+TGG | - | chr5.2:32871773-32871792 | None:intergenic | 20.0% |
| !! | TATAAAATAGATACCTGTTT+AGG | + | chr5.2:32870166-32870185 | MS.gene78555:intron | 20.0% |
| !! | TGAAATCTTTAGACTAAATA+GGG | + | chr5.2:32867695-32867714 | MS.gene78555:intron | 20.0% |
| !! | TGAGTTTCAACTAATATAAT+AGG | + | chr5.2:32867608-32867627 | MS.gene78555:intron | 20.0% |
| !! | TGGACATTTAATAGAAAAAT+AGG | - | chr5.2:32868790-32868809 | None:intergenic | 20.0% |
| !! | TGTTATATGGTTATGTTAAA+AGG | - | chr5.2:32869367-32869386 | None:intergenic | 20.0% |
| !!! | AATTCCTTTTTGTTAAATCA+CGG | + | chr5.2:32871332-32871351 | MS.gene78555:intron | 20.0% |
| !!! | AATTTTCTTGTGGATATAAA+AGG | + | chr5.2:32869921-32869940 | MS.gene78555:CDS | 20.0% |
| !!! | AGGATTTCAATTTTGAAATT+AGG | + | chr5.2:32869215-32869234 | MS.gene78555:intron | 20.0% |
| !!! | ATTTGTAACAATTTTTAGGA+TGG | + | chr5.2:32868267-32868286 | MS.gene78555:intron | 20.0% |
| !!! | CATTATTTCTTTTTTGTTTC+TGG | + | chr5.2:32871729-32871748 | MS.gene78555:intron | 20.0% |
| !!! | CCATTTTCATTTTATTTTAG+TGG | - | chr5.2:32870608-32870627 | None:intergenic | 20.0% |
| !!! | GGATTTCAATTTTGAAATTA+GGG | + | chr5.2:32869216-32869235 | MS.gene78555:intron | 20.0% |
| !!! | TAATGAGATATGTTTTTCTT+TGG | + | chr5.2:32869542-32869561 | MS.gene78555:intron | 20.0% |
| !!! | TCAGAAATTTGATGATTTTA+GGG | - | chr5.2:32867678-32867697 | None:intergenic | 20.0% |
| !!! | TCTCATTTGTAACAATTTTT+AGG | + | chr5.2:32868263-32868282 | MS.gene78555:intron | 20.0% |
| !!! | TGATTTATTAAAAGTATGCA+TGG | - | chr5.2:32871552-32871571 | None:intergenic | 20.0% |
| !!! | TTACTATTCCTAGATTTTTT+AGG | + | chr5.2:32867425-32867444 | MS.gene78555:intron | 20.0% |
| !!! | TTCAGAAATTTGATGATTTT+AGG | - | chr5.2:32867679-32867698 | None:intergenic | 20.0% |
| !!! | TTCTATCTTTGATTTTGTTA+TGG | + | chr5.2:32871408-32871427 | MS.gene78555:intron | 20.0% |
| !!! | TTTTCTATTCCTAGATTTTT+AGG | + | chr5.2:32867328-32867347 | MS.gene78555:intron | 20.0% |
| !!! | TTTTTCAGTTAGATGTATTT+GGG | + | chr5.2:32870909-32870928 | MS.gene78555:intron | 20.0% |
| !!! | TTTTTTCAGTTAGATGTATT+TGG | + | chr5.2:32870908-32870927 | MS.gene78555:intron | 20.0% |
| ! | AAAAAAAAACCATCTCCTAA+TGG | + | chr5.2:32868843-32868862 | MS.gene78555:intron | 25.0% |
| ! | AAAAAAAACCATCTCCTAAT+GGG | + | chr5.2:32868844-32868863 | MS.gene78555:intron | 25.0% |
| ! | AAACATTATTTAACAGCAAC+AGG | - | chr5.2:32871143-32871162 | None:intergenic | 25.0% |
| ! | AAATTTCGTAGATCAATTAG+TGG | + | chr5.2:32867007-32867026 | MS.gene78555:CDS | 25.0% |
| ! | AACAGGTTATAAAACTAGAA+TGG | - | chr5.2:32868448-32868467 | None:intergenic | 25.0% |
| ! | AACATTATTTAACAGCAACA+GGG | - | chr5.2:32871142-32871161 | None:intergenic | 25.0% |
| ! | AAGAAATATACCTAAGTTTG+AGG | + | chr5.2:32869992-32870011 | MS.gene78555:CDS | 25.0% |
| ! | ACAATAGTGTATTTATATGG+TGG | + | chr5.2:32869484-32869503 | MS.gene78555:intron | 25.0% |
| ! | ACAATTATCATGAATGTTGA+GGG | + | chr5.2:32870278-32870297 | MS.gene78555:intron | 25.0% |
| ! | ACAGGTTATAAAACTAGAAT+GGG | - | chr5.2:32868447-32868466 | None:intergenic | 25.0% |
| ! | ATTCATTCACAAATTTCCTA+TGG | - | chr5.2:32869439-32869458 | None:intergenic | 25.0% |
| ! | CACATCATACATATATATTC+TGG | + | chr5.2:32868820-32868839 | MS.gene78555:intron | 25.0% |
| ! | CTGAAATCTTTAGACTAAAT+AGG | + | chr5.2:32867694-32867713 | MS.gene78555:intron | 25.0% |
| ! | GTAATAGTATGTTGAAATCT+TGG | - | chr5.2:32868024-32868043 | None:intergenic | 25.0% |
| ! | GTATAAACGGAAAATTTCAA+TGG | - | chr5.2:32868082-32868101 | None:intergenic | 25.0% |
| ! | GTCACAATAGTGTATTTATA+TGG | + | chr5.2:32869481-32869500 | MS.gene78555:intron | 25.0% |
| ! | GTGGCAAAATTTAATAATAG+TGG | - | chr5.2:32870935-32870954 | None:intergenic | 25.0% |
| ! | TAGTGAATTTCAAGAGATTT+GGG | - | chr5.2:32870810-32870829 | None:intergenic | 25.0% |
| ! | TCTAATAAATAAACCCCATT+TGG | - | chr5.2:32870742-32870761 | None:intergenic | 25.0% |
| ! | TCTGTTAACTATAAATTACG+CGG | + | chr5.2:32869170-32869189 | MS.gene78555:intron | 25.0% |
| ! | TGCATATATTATCAGCTATT+TGG | - | chr5.2:32868484-32868503 | None:intergenic | 25.0% |
| ! | TGCTGTTAAATAATGTTTCT+GGG | + | chr5.2:32871145-32871164 | MS.gene78555:intron | 25.0% |
| ! | TTAACAACACTGATGTTATA+TGG | - | chr5.2:32869380-32869399 | None:intergenic | 25.0% |
| ! | TTAGTGAATTTCAAGAGATT+TGG | - | chr5.2:32870811-32870830 | None:intergenic | 25.0% |
| ! | TTATAAAACTAGAATGGGAT+TGG | - | chr5.2:32868442-32868461 | None:intergenic | 25.0% |
| ! | TTATTATCCAATGTTGTCAA+TGG | - | chr5.2:32869525-32869544 | None:intergenic | 25.0% |
| !! | AAACATATAGCCTTCTTTTA+GGG | - | chr5.2:32871472-32871491 | None:intergenic | 25.0% |
| !! | AAGACTTTAGTTTAACCAAA+CGG | - | chr5.2:32871006-32871025 | None:intergenic | 25.0% |
| !! | ACTATAGTTACTTTGCTTTA+TGG | + | chr5.2:32870243-32870262 | MS.gene78555:intron | 25.0% |
| !! | AGTTCTTTTTACCAAAATAG+AGG | - | chr5.2:32869754-32869773 | None:intergenic | 25.0% |
| !! | ATAACATCAGTGTTGTTAAA+CGG | + | chr5.2:32869381-32869400 | MS.gene78555:intron | 25.0% |
| !! | ATGGAAACTTTTATACTTTG+TGG | + | chr5.2:32867530-32867549 | MS.gene78555:intron | 25.0% |
| !! | GAGTTTTTGATAGAACATTA+TGG | + | chr5.2:32869790-32869809 | MS.gene78555:intron | 25.0% |
| !! | GTTCTTTTTACCAAAATAGA+GGG | - | chr5.2:32869753-32869772 | None:intergenic | 25.0% |
| !! | TGGAAACTTTTATACTTTGT+GGG | + | chr5.2:32867531-32867550 | MS.gene78555:intron | 25.0% |
| !! | TTGCTGTTAAATAATGTTTC+TGG | + | chr5.2:32871144-32871163 | MS.gene78555:intron | 25.0% |
| !!! | AAAACTGAAACCATTGATTT+CGG | - | chr5.2:32868616-32868635 | None:intergenic | 25.0% |
| !!! | AATCATTTTTTTCTTAGGCA+GGG | - | chr5.2:32867567-32867586 | None:intergenic | 25.0% |
| !!! | GTATTTATATGGTGGATTTT+CGG | + | chr5.2:32869492-32869511 | MS.gene78555:intron | 25.0% |
| !!! | TAATCATTTTTTTCTTAGGC+AGG | - | chr5.2:32867568-32867587 | None:intergenic | 25.0% |
| !!! | TGTTGATTTTTCAATGTTAC+TGG | + | chr5.2:32868415-32868434 | MS.gene78555:intron | 25.0% |
| !!! | TTAATTGTGCAAGTTGTTTT+AGG | + | chr5.2:32869195-32869214 | MS.gene78555:intron | 25.0% |
| !!! | TTTTAGGATTTATTCCATGT+TGG | + | chr5.2:32869262-32869281 | MS.gene78555:intron | 25.0% |
| AAAATGAAAATGGGTACACT+CGG | + | chr5.2:32870615-32870634 | MS.gene78555:intron | 30.0% | |
| AAACTTTCTTACATCTGATC+TGG | - | chr5.2:32869067-32869086 | None:intergenic | 30.0% | |
| AACTAATATAATAGGGACCA+AGG | + | chr5.2:32867616-32867635 | MS.gene78555:intron | 30.0% | |
| AATCAAAACTTATGCCCATT+AGG | - | chr5.2:32868861-32868880 | None:intergenic | 30.0% | |
| AATTATGCCTTTGGATGAAT+AGG | + | chr5.2:32870710-32870729 | MS.gene78555:intron | 30.0% | |
| ACAGATCAGTTAGAATATTG+TGG | - | chr5.2:32870505-32870524 | None:intergenic | 30.0% | |
| AGTTCAGCAAAGTGTATAAA+CGG | - | chr5.2:32868095-32868114 | None:intergenic | 30.0% | |
| ATAGCATTTATCTGATCCTA+CGG | - | chr5.2:32868958-32868977 | None:intergenic | 30.0% | |
| ATGAATAGGTTATCTCCAAA+TGG | + | chr5.2:32870724-32870743 | MS.gene78555:intron | 30.0% | |
| ATGAGCTTGTATTTCTTAGT+CGG | - | chr5.2:32869660-32869679 | None:intergenic | 30.0% | |
| ATGGTGCTTGCAAAATAAAA+TGG | - | chr5.2:32871389-32871408 | None:intergenic | 30.0% | |
| CAATTATCATGAATGTTGAG+GGG | + | chr5.2:32870279-32870298 | MS.gene78555:intron | 30.0% | |
| CACAATTATCATGAATGTTG+AGG | + | chr5.2:32870277-32870296 | MS.gene78555:intron | 30.0% | |
| CATTATACCAATCACAAGAT+TGG | + | chr5.2:32870410-32870429 | MS.gene78555:intron | 30.0% | |
| CTAGTCTATTCGTTATGAAA+CGG | - | chr5.2:32868925-32868944 | None:intergenic | 30.0% | |
| CTTTCAACCCAGTATTTATT+AGG | - | chr5.2:32868339-32868358 | None:intergenic | 30.0% | |
| GAAAAATTACATGATGGTCA+GGG | - | chr5.2:32871767-32871786 | None:intergenic | 30.0% | |
| GAATAATATCCCGAAATCAA+TGG | + | chr5.2:32868603-32868622 | MS.gene78555:intron | 30.0% | |
| GAGAAATAAGTATCCTAAAC+AGG | - | chr5.2:32870182-32870201 | None:intergenic | 30.0% | |
| GAGTAGGTTTAAGTATTTCT+TGG | + | chr5.2:32870683-32870702 | MS.gene78555:intron | 30.0% | |
| GATACCATTAGCAAAACATT+TGG | + | chr5.2:32869339-32869358 | MS.gene78555:intron | 30.0% | |
| TAAGAAATACAAGCTCATGA+TGG | + | chr5.2:32869662-32869681 | MS.gene78555:intron | 30.0% | |
| TAATGCACTTATAAACTCAG+AGG | + | chr5.2:32871868-32871887 | MS.gene78555:CDS | 30.0% | |
| TAGTCTATTCGTTATGAAAC+GGG | - | chr5.2:32868924-32868943 | None:intergenic | 30.0% | |
| TATATAATTTAGCCCAATGC+TGG | - | chr5.2:32868891-32868910 | None:intergenic | 30.0% | |
| TATATGTATGATGTGTGCTA+AGG | - | chr5.2:32868815-32868834 | None:intergenic | 30.0% | |
| TATATGTTTGAGTGTTCAAC+TGG | + | chr5.2:32871483-32871502 | MS.gene78555:CDS | 30.0% | |
| TGAAAAATTACATGATGGTC+AGG | - | chr5.2:32871768-32871787 | None:intergenic | 30.0% | |
| TGAATAGGTTATCTCCAAAT+GGG | + | chr5.2:32870725-32870744 | MS.gene78555:intron | 30.0% | |
| TGATAAAAACGAGTGTCTAT+GGG | - | chr5.2:32867303-32867322 | None:intergenic | 30.0% | |
| TGATGTGATTTCTGTAATGA+AGG | + | chr5.2:32868290-32868309 | MS.gene78555:CDS | 30.0% | |
| TGTTTGAAAATCATCACTAG+TGG | + | chr5.2:32870652-32870671 | MS.gene78555:intron | 30.0% | |
| TTCTAATCACTTTATCCCTA+AGG | - | chr5.2:32867984-32868003 | None:intergenic | 30.0% | |
| TTGAAAAACGATGTTTGCAT+TGG | + | chr5.2:32867377-32867396 | MS.gene78555:intron | 30.0% | |
| TTGATAAAAACGAGTGTCTA+TGG | - | chr5.2:32867304-32867323 | None:intergenic | 30.0% | |
| TTGATCTACGAAATTTGTAG+CGG | - | chr5.2:32867003-32867022 | None:intergenic | 30.0% | |
| TTGGCTTAAAATAGACAAAC+AGG | - | chr5.2:32868465-32868484 | None:intergenic | 30.0% | |
| ! | AAACTTTTATACTTTGTGGG+TGG | + | chr5.2:32867534-32867553 | MS.gene78555:intron | 30.0% |
| ! | AACTATTGTACCCTCTATTT+TGG | + | chr5.2:32869740-32869759 | MS.gene78555:intron | 30.0% |
| ! | ACTTGTCATGTAATTTGTGT+TGG | + | chr5.2:32868689-32868708 | MS.gene78555:intron | 30.0% |
| ! | AGAAGTTGTATGTTGTTTGT+AGG | + | chr5.2:32871579-32871598 | MS.gene78555:intron | 30.0% |
| ! | ATTTGTGCAGAATTTTCTTG+TGG | + | chr5.2:32869911-32869930 | MS.gene78555:intron | 30.0% |
| ! | CAAACATATAGCCTTCTTTT+AGG | - | chr5.2:32871473-32871492 | None:intergenic | 30.0% |
| ! | TATTTTGTACAAGCAGTAAC+TGG | - | chr5.2:32867824-32867843 | None:intergenic | 30.0% |
| ! | TCAAACCATTTTGAATGAGA+GGG | + | chr5.2:32868739-32868758 | MS.gene78555:intron | 30.0% |
| ! | TCAAATTTTGTGTGAATCGA+AGG | + | chr5.2:32868115-32868134 | MS.gene78555:intron | 30.0% |
| ! | TTAGGATACTTATTTCTCTG+TGG | + | chr5.2:32870184-32870203 | MS.gene78555:intron | 30.0% |
| ! | TTCAAACCATTTTGAATGAG+AGG | + | chr5.2:32868738-32868757 | MS.gene78555:intron | 30.0% |
| ! | TTTCAGCCATTATTTTCTGT+TGG | - | chr5.2:32871907-32871926 | None:intergenic | 30.0% |
| ! | TTTTACACCTAGAACTAGAA+TGG | + | chr5.2:32868525-32868544 | MS.gene78555:intron | 30.0% |
| !! | AAAAAGAACTGACTTTTCTC+AGG | + | chr5.2:32869764-32869783 | MS.gene78555:intron | 30.0% |
| !! | AAACTGAAACCATTGATTTC+GGG | - | chr5.2:32868615-32868634 | None:intergenic | 30.0% |
| !! | ATCACTACTCAAAAGGTATT+GGG | - | chr5.2:32870450-32870469 | None:intergenic | 30.0% |
| !! | ATTCCTAGATTTTTAGGCTT+GGG | + | chr5.2:32867334-32867353 | MS.gene78555:intron | 30.0% |
| !! | GTTAAATAATGTTTCTGGGT+TGG | + | chr5.2:32871149-32871168 | MS.gene78555:intron | 30.0% |
| !! | TATCAGTTTTAACAGACAAG+AGG | - | chr5.2:32870568-32870587 | None:intergenic | 30.0% |
| !! | TATTCCTAGATTTTTAGGCT+TGG | + | chr5.2:32867333-32867352 | MS.gene78555:intron | 30.0% |
| !! | TTGAAATTGCTGTTTCATCT+AGG | + | chr5.2:32871808-32871827 | MS.gene78555:intron | 30.0% |
| !!! | ATTCCTAGATTTTTTAGGCT+TGG | + | chr5.2:32867430-32867449 | MS.gene78555:intron | 30.0% |
| !!! | TTCCTAGATTTTTTAGGCTT+GGG | + | chr5.2:32867431-32867450 | MS.gene78555:intron | 30.0% |
| !!! | TTGGTATGTCCTGTTTTTAT+AGG | + | chr5.2:32871168-32871187 | MS.gene78555:intron | 30.0% |
| AAATACACTATTGTGACCCA+CGG | - | chr5.2:32869478-32869497 | None:intergenic | 35.0% | |
| AAATGAAAATGGGTACACTC+GGG | + | chr5.2:32870616-32870635 | MS.gene78555:intron | 35.0% | |
| AACCCAGTATTTATTAGGCT+TGG | - | chr5.2:32868334-32868353 | None:intergenic | 35.0% | |
| AAGCTCATGATGGTAATTCA+GGG | + | chr5.2:32869672-32869691 | MS.gene78555:intron | 35.0% | |
| AAGTATGCATGGACAGAAAA+AGG | - | chr5.2:32871541-32871560 | None:intergenic | 35.0% | |
| ACAAACCAGACTATTAAGCT+TGG | + | chr5.2:32867155-32867174 | MS.gene78555:CDS | 35.0% | |
| ACAAGCAATTCACGAGTTAT+AGG | - | chr5.2:32869712-32869731 | None:intergenic | 35.0% | |
| ACACAACCTCCTATAAAAAC+AGG | - | chr5.2:32871180-32871199 | None:intergenic | 35.0% | |
| ACATGGAATGTGAAAACTAG+AGG | - | chr5.2:32871707-32871726 | None:intergenic | 35.0% | |
| ACCTACTTTAGCATTTCTAC+CGG | + | chr5.2:32869944-32869963 | MS.gene78555:CDS | 35.0% | |
| ACCTCCGTGATTTAACAAAA+AGG | - | chr5.2:32871339-32871358 | None:intergenic | 35.0% | |
| AGAATACGTTACTAGCAGAA+TGG | - | chr5.2:32868246-32868265 | None:intergenic | 35.0% | |
| AGAATATTGTGGCAAGTAAC+TGG | - | chr5.2:32870494-32870513 | None:intergenic | 35.0% | |
| ATATCAACCCTCTTCATTCA+AGG | - | chr5.2:32867724-32867743 | None:intergenic | 35.0% | |
| ATTTGCATAGCCAATTCATG+CGG | - | chr5.2:32867861-32867880 | None:intergenic | 35.0% | |
| CACACAATTTGGAAGTCTAA+AGG | - | chr5.2:32867501-32867520 | None:intergenic | 35.0% | |
| CATTCACAAATTTCCTATGG+CGG | - | chr5.2:32869436-32869455 | None:intergenic | 35.0% | |
| CCATTATATAAATGGAGCAG+AGG | - | chr5.2:32867949-32867968 | None:intergenic | 35.0% | |
| CCTCTGCTCCATTTATATAA+TGG | + | chr5.2:32867946-32867965 | MS.gene78555:intron | 35.0% | |
| CTATAGTATGAGACATTGTC+AGG | - | chr5.2:32870230-32870249 | None:intergenic | 35.0% | |
| CTCCAAGCCTAATAAATACT+GGG | + | chr5.2:32868329-32868348 | MS.gene78555:CDS | 35.0% | |
| CTGGAATAAACAATCCAACA+TGG | - | chr5.2:32869279-32869298 | None:intergenic | 35.0% | |
| CTTGGTCTAAATTATGCCTT+TGG | + | chr5.2:32870701-32870720 | MS.gene78555:intron | 35.0% | |
| CTTTAGACTTCCAAATTGTG+TGG | + | chr5.2:32867499-32867518 | MS.gene78555:intron | 35.0% | |
| GAATAGGTTATCTCCAAATG+GGG | + | chr5.2:32870726-32870745 | MS.gene78555:intron | 35.0% | |
| GAGATAACCTATTCATCCAA+AGG | - | chr5.2:32870720-32870739 | None:intergenic | 35.0% | |
| GGTTGAAAGTTCTCAAAAGA+GGG | + | chr5.2:32868350-32868369 | MS.gene78555:CDS | 35.0% | |
| GTCCTGTACTTGATACTTTA+GGG | + | chr5.2:32871621-32871640 | MS.gene78555:CDS | 35.0% | |
| GTTTCCATTCTACAACAAGA+GGG | + | chr5.2:32868556-32868575 | MS.gene78555:intron | 35.0% | |
| TATACCAATCACAAGATTGG+AGG | + | chr5.2:32870413-32870432 | MS.gene78555:intron | 35.0% | |
| TCTCCAAGCCTAATAAATAC+TGG | + | chr5.2:32868328-32868347 | MS.gene78555:CDS | 35.0% | |
| TCTTTACTCATCTCCATACT+TGG | + | chr5.2:32868161-32868180 | MS.gene78555:intron | 35.0% | |
| TGAATTTCAAGAGATTTGGG+TGG | - | chr5.2:32870807-32870826 | None:intergenic | 35.0% | |
| TGCTAAGAAGATACCAAGTA+TGG | - | chr5.2:32868177-32868196 | None:intergenic | 35.0% | |
| TGGTGTCCAACAGAAAATAA+TGG | + | chr5.2:32871898-32871917 | MS.gene78555:CDS | 35.0% | |
| TGTCCTGTACTTGATACTTT+AGG | + | chr5.2:32871620-32871639 | MS.gene78555:CDS | 35.0% | |
| TGTTTCCATTCTACAACAAG+AGG | + | chr5.2:32868555-32868574 | MS.gene78555:intron | 35.0% | |
| TTGACTATTTCCGCATGAAT+TGG | + | chr5.2:32867848-32867867 | MS.gene78555:intron | 35.0% | |
| TTGGATTGTTTATTCCAGCA+TGG | + | chr5.2:32869281-32869300 | MS.gene78555:intron | 35.0% | |
| TTTATGCACACCTCAAACTT+AGG | - | chr5.2:32870005-32870024 | None:intergenic | 35.0% | |
| ! | ATGGTTTTCTTGTTCTCCTT+AGG | + | chr5.2:32867965-32867984 | MS.gene78555:intron | 35.0% |
| ! | CATCACTACTCAAAAGGTAT+TGG | - | chr5.2:32870451-32870470 | None:intergenic | 35.0% |
| ! | CTTAATAGTCTGGTTTGTCA+TGG | - | chr5.2:32867153-32867172 | None:intergenic | 35.0% |
| ! | TAGAGGGTACAATAGTTGAA+TGG | - | chr5.2:32869737-32869756 | None:intergenic | 35.0% |
| ! | TATTATGCAACCAGCATTGA+AGG | - | chr5.2:32867651-32867670 | None:intergenic | 35.0% |
| ! | TCCTTTTTGTTAAATCACGG+AGG | + | chr5.2:32871335-32871354 | MS.gene78555:intron | 35.0% |
| ! | TGATTTTCCTTTCCAGCATT+GGG | + | chr5.2:32868876-32868895 | MS.gene78555:intron | 35.0% |
| ! | TGGATGCTGTTATTTGTTGA+TGG | + | chr5.2:32867034-32867053 | MS.gene78555:intron | 35.0% |
| ! | TGGTTTTCTTGTTCTCCTTA+GGG | + | chr5.2:32867966-32867985 | MS.gene78555:intron | 35.0% |
| ! | TTCAATGCTGGTTGCATAAT+AGG | + | chr5.2:32867650-32867669 | MS.gene78555:intron | 35.0% |
| ! | TTCCCTAAAGTATCAAGTAC+AGG | - | chr5.2:32871626-32871645 | None:intergenic | 35.0% |
| ! | TTGATTTTCCTTTCCAGCAT+TGG | + | chr5.2:32868875-32868894 | MS.gene78555:intron | 35.0% |
| ! | TTTTATACTTTGTGGGTGGT+GGG | + | chr5.2:32867538-32867557 | MS.gene78555:intron | 35.0% |
| ! | TTTTGCCATCACTACTCAAA+AGG | - | chr5.2:32870457-32870476 | None:intergenic | 35.0% |
| !! | ATAAACTCAGAGGTATTGAG+TGG | + | chr5.2:32871878-32871897 | MS.gene78555:CDS | 35.0% |
| !! | CAATACCTTTTGAGTAGTGA+TGG | + | chr5.2:32870449-32870468 | MS.gene78555:intron | 35.0% |
| !! | TATCAGTCCATTCTAGTTCT+AGG | - | chr5.2:32868535-32868554 | None:intergenic | 35.0% |
| !!! | GTATGTCCTGTTTTTATAGG+AGG | + | chr5.2:32871171-32871190 | MS.gene78555:intron | 35.0% |
| !!! | TAGATTTTTTAGGCTTGGGA+GGG | + | chr5.2:32867435-32867454 | MS.gene78555:intron | 35.0% |
| AAAGCTCAGGATTCATTCCA+GGG | - | chr5.2:32871269-32871288 | None:intergenic | 40.0% | |
| AAAGTGGAACTTGTAGGGAT+GGG | + | chr5.2:32868581-32868600 | MS.gene78555:intron | 40.0% | |
| AAATTGTGTGGAGCTGACTA+TGG | + | chr5.2:32867511-32867530 | MS.gene78555:intron | 40.0% | |
| AACAGGGAAATGACAGATCA+AGG | - | chr5.2:32871126-32871145 | None:intergenic | 40.0% | |
| AACCAGACTATTAAGCTTGG+AGG | + | chr5.2:32867158-32867177 | MS.gene78555:CDS | 40.0% | |
| AACCTGCAAGGTGAAGAATT+AGG | - | chr5.2:32871211-32871230 | None:intergenic | 40.0% | |
| AACTTATGCCCATTAGGAGA+TGG | - | chr5.2:32868855-32868874 | None:intergenic | 40.0% | |
| AATTTAGCCCAATGCTGGAA+AGG | - | chr5.2:32868886-32868905 | None:intergenic | 40.0% | |
| ACAGGGAAATGACAGATCAA+GGG | - | chr5.2:32871125-32871144 | None:intergenic | 40.0% | |
| ACCGGTAGAAATGCTAAAGT+AGG | - | chr5.2:32869948-32869967 | None:intergenic | 40.0% | |
| AGTATCAAGTACAGGACATG+TGG | - | chr5.2:32871618-32871637 | None:intergenic | 40.0% | |
| ATAGTCAGCTCCACACAATT+TGG | - | chr5.2:32867512-32867531 | None:intergenic | 40.0% | |
| ATCATCACTAGTGGTGTATG+TGG | + | chr5.2:32870661-32870680 | MS.gene78555:intron | 40.0% | |
| ATGGTGTATGTTTAGCCAGT+GGG | + | chr5.2:32871427-32871446 | MS.gene78555:intron | 40.0% | |
| CAAGATTGGAGGTCAAACAT+TGG | + | chr5.2:32870424-32870443 | MS.gene78555:intron | 40.0% | |
| CAAGCTCATGATGGTAATTC+AGG | + | chr5.2:32869671-32869690 | MS.gene78555:intron | 40.0% | |
| CGAGTTTGAGCGTAAACAAA+AGG | + | chr5.2:32867758-32867777 | MS.gene78555:intron | 40.0% | |
| CTCCCAAGCCTAAAAAATCT+AGG | - | chr5.2:32867436-32867455 | None:intergenic | 40.0% | |
| CTGATGTAGAGCTATAAGCA+TGG | - | chr5.2:32869616-32869635 | None:intergenic | 40.0% | |
| GACATTGTCAGGACTAATTG+TGG | - | chr5.2:32870219-32870238 | None:intergenic | 40.0% | |
| GATAGTTGTAGATGGAGATG+AGG | - | chr5.2:32871840-32871859 | None:intergenic | 40.0% | |
| GCAATGTACTCATCTGACTT+GGG | - | chr5.2:32869579-32869598 | None:intergenic | 40.0% | |
| GCTACGATGATAGTTGTAGA+TGG | - | chr5.2:32871848-32871867 | None:intergenic | 40.0% | |
| GGGTGAGTATATTAGTGTGA+AGG | + | chr5.2:32868370-32868389 | MS.gene78555:intron | 40.0% | |
| GGGTTGAAAGTTCTCAAAAG+AGG | + | chr5.2:32868349-32868368 | MS.gene78555:CDS | 40.0% | |
| GTAGATCAATTAGTGGTGAG+TGG | + | chr5.2:32867014-32867033 | MS.gene78555:intron | 40.0% | |
| GTATCAAGTACAGGACATGT+GGG | - | chr5.2:32871617-32871636 | None:intergenic | 40.0% | |
| GTCAGGACTAATTGTGGAAA+AGG | - | chr5.2:32870213-32870232 | None:intergenic | 40.0% | |
| GTGATTTCTGTAATGAAGGC+TGG | + | chr5.2:32868294-32868313 | MS.gene78555:CDS | 40.0% | |
| GTTTATTCCAGCATGGAGTA+GGG | + | chr5.2:32869288-32869307 | MS.gene78555:intron | 40.0% | |
| TAAAGTGGAACTTGTAGGGA+TGG | + | chr5.2:32868580-32868599 | MS.gene78555:intron | 40.0% | |
| TAATTCTTCACCTTGCAGGT+TGG | + | chr5.2:32871210-32871229 | MS.gene78555:intron | 40.0% | |
| TATGGTGTATGTTTAGCCAG+TGG | + | chr5.2:32871426-32871445 | MS.gene78555:intron | 40.0% | |
| TGTTTATTCCAGCATGGAGT+AGG | + | chr5.2:32869287-32869306 | MS.gene78555:intron | 40.0% | |
| TTCTGTGAATGCATGTTGCA+TGG | + | chr5.2:32870769-32870788 | MS.gene78555:intron | 40.0% | |
| TTGACCTCCAATCTTGTGAT+TGG | - | chr5.2:32870420-32870439 | None:intergenic | 40.0% | |
| TTGCAGGACGAAACAAAAGA+GGG | - | chr5.2:32871097-32871116 | None:intergenic | 40.0% | |
| TTTGCAGGACGAAACAAAAG+AGG | - | chr5.2:32871098-32871117 | None:intergenic | 40.0% | |
| ! | AACCATTTTGAATGAGAGGG+TGG | + | chr5.2:32868742-32868761 | MS.gene78555:intron | 40.0% |
| ! | AAGCTTTGTCCTACTAAGTG+GGG | - | chr5.2:32869839-32869858 | None:intergenic | 40.0% |
| ! | CAAGCTTTGTCCTACTAAGT+GGG | - | chr5.2:32869840-32869859 | None:intergenic | 40.0% |
| ! | CTTTTATACTTTGTGGGTGG+TGG | + | chr5.2:32867537-32867556 | MS.gene78555:intron | 40.0% |
| ! | GACTAGCAATGTTTTTCCGT+AGG | + | chr5.2:32868939-32868958 | MS.gene78555:intron | 40.0% |
| ! | GGTGCCAAATGTTTTGCTAA+TGG | - | chr5.2:32869346-32869365 | None:intergenic | 40.0% |
| ! | GTGTTGTTAAACGGTTGTCA+TGG | + | chr5.2:32869390-32869409 | MS.gene78555:intron | 40.0% |
| ! | TAAATCACGGAGGTTTTCTC+TGG | + | chr5.2:32871345-32871364 | MS.gene78555:intron | 40.0% |
| ! | TTAGCCCTCTTGTTGTAGAA+TGG | - | chr5.2:32868563-32868582 | None:intergenic | 40.0% |
| ! | TTGGTGCTTTGCTTTATGTG+CGG | + | chr5.2:32871229-32871248 | MS.gene78555:CDS | 40.0% |
| !! | CTAGATTTTTAGGCTTGGGA+GGG | + | chr5.2:32867338-32867357 | MS.gene78555:intron | 40.0% |
| !! | TTTGCGGTTTTGTAGTATCC+TGG | + | chr5.2:32867104-32867123 | MS.gene78555:intron | 40.0% |
| !!! | AGATTTTTTAGGCTTGGGAG+GGG | + | chr5.2:32867436-32867455 | MS.gene78555:intron | 40.0% |
| !!! | CTAGATTTTTTAGGCTTGGG+AGG | + | chr5.2:32867434-32867453 | MS.gene78555:intron | 40.0% |
| AAGATAACCCTACTCCATGC+TGG | - | chr5.2:32869298-32869317 | None:intergenic | 45.0% | |
| AAGATGTGGCCAAGACTATG+AGG | + | chr5.2:32870876-32870895 | MS.gene78555:intron | 45.0% | |
| AAGCATAACGCATTGCCGTT+TGG | + | chr5.2:32870988-32871007 | MS.gene78555:intron | 45.0% | |
| AATAGGGACCAAGGCTTGTA+AGG | + | chr5.2:32867625-32867644 | MS.gene78555:intron | 45.0% | |
| ACTAGTGGTGTATGTGGAGT+AGG | + | chr5.2:32870667-32870686 | MS.gene78555:intron | 45.0% | |
| AGAACTGAATCCTCTGCATG+CGG | - | chr5.2:32869027-32869046 | None:intergenic | 45.0% | |
| AGATGAGTACATTGCCCTAG+AGG | + | chr5.2:32869584-32869603 | MS.gene78555:intron | 45.0% | |
| AGGGCTAAAGTGGAACTTGT+AGG | + | chr5.2:32868575-32868594 | MS.gene78555:intron | 45.0% | |
| ATCATGAATGTTGAGGGGCT+TGG | + | chr5.2:32870284-32870303 | MS.gene78555:intron | 45.0% | |
| ATTGAAGGCCTTACAAGCCT+TGG | - | chr5.2:32867636-32867655 | None:intergenic | 45.0% | |
| CAGACTATTAAGCTTGGAGG+CGG | + | chr5.2:32867161-32867180 | MS.gene78555:CDS | 45.0% | |
| CATGCAGAGGATTCAGTTCT+TGG | + | chr5.2:32869027-32869046 | MS.gene78555:CDS | 45.0% | |
| CCAATGTTGTCAATGGCAGA+AGG | - | chr5.2:32869518-32869537 | None:intergenic | 45.0% | |
| CCACTTAGTAGGACAAAGCT+TGG | + | chr5.2:32869838-32869857 | MS.gene78555:intron | 45.0% | |
| CCTCCCAAGCCTAAAAATCT+AGG | - | chr5.2:32867340-32867359 | None:intergenic | 45.0% | |
| CCTTCTGCCATTGACAACAT+TGG | + | chr5.2:32869515-32869534 | MS.gene78555:intron | 45.0% | |
| CTACAACAAGAGGGCTAAAG+TGG | + | chr5.2:32868565-32868584 | MS.gene78555:intron | 45.0% | |
| CTCATGATGGTAATTCAGGG+AGG | + | chr5.2:32869675-32869694 | MS.gene78555:intron | 45.0% | |
| GAAAGCTCAGGATTCATTCC+AGG | - | chr5.2:32871270-32871289 | None:intergenic | 45.0% | |
| GAATCCTGAGCTTTCATGCA+CGG | + | chr5.2:32871275-32871294 | MS.gene78555:CDS | 45.0% | |
| GACCACCCTCTCATTCAAAA+TGG | - | chr5.2:32868747-32868766 | None:intergenic | 45.0% | |
| GATATTTGGACAACCGCCAT+AGG | + | chr5.2:32869420-32869439 | MS.gene78555:intron | 45.0% | |
| GGCAATGTACTCATCTGACT+TGG | - | chr5.2:32869580-32869599 | None:intergenic | 45.0% | |
| GGGCTAAAGTGGAACTTGTA+GGG | + | chr5.2:32868576-32868595 | MS.gene78555:intron | 45.0% | |
| GTATGATGTGTGCTAAGGAG+TGG | - | chr5.2:32868810-32868829 | None:intergenic | 45.0% | |
| TATTCGTTATGAAACGGGCG+AGG | - | chr5.2:32868919-32868938 | None:intergenic | 45.0% | |
| TCATGAATGTTGAGGGGCTT+GGG | + | chr5.2:32870285-32870304 | MS.gene78555:intron | 45.0% | |
| TGAATGGACGTGTTTGGGTA+TGG | + | chr5.2:32871675-32871694 | MS.gene78555:intron | 45.0% | |
| TGCCTAATTCTTCACCTTGC+AGG | + | chr5.2:32871206-32871225 | MS.gene78555:intron | 45.0% | |
| TGGCTTGAATGGACGTGTTT+GGG | + | chr5.2:32871670-32871689 | MS.gene78555:CDS | 45.0% | |
| TGGTGCTTTGCTTTATGTGC+GGG | + | chr5.2:32871230-32871249 | MS.gene78555:CDS | 45.0% | |
| TTTCTGTAATGAAGGCTGGC+AGG | + | chr5.2:32868298-32868317 | MS.gene78555:CDS | 45.0% | |
| TTTGTAGTATCCTGGCGATG+TGG | + | chr5.2:32867112-32867131 | MS.gene78555:intron | 45.0% | |
| TTTGTCCTACTAAGTGGGGT+CGG | - | chr5.2:32869835-32869854 | None:intergenic | 45.0% | |
| ! | AAATTTTGCCACTGCCCACA+CGG | + | chr5.2:32870943-32870962 | MS.gene78555:intron | 45.0% |
| ! | AAGCATGGAGTACTCCTCTA+GGG | - | chr5.2:32869601-32869620 | None:intergenic | 45.0% |
| ! | ACTGGTCTCTCAAGGATGTA+TGG | + | chr5.2:32871501-32871520 | MS.gene78555:intron | 45.0% |
| ! | AGGGTGTCCTTGAATGAAGA+GGG | + | chr5.2:32867714-32867733 | MS.gene78555:intron | 45.0% |
| ! | AGTGTTCAACTGGTCTCTCA+AGG | + | chr5.2:32871493-32871512 | MS.gene78555:CDS | 45.0% |
| ! | CCAAGCTTTGTCCTACTAAG+TGG | - | chr5.2:32869841-32869860 | None:intergenic | 45.0% |
| ! | TAAGCATGGAGTACTCCTCT+AGG | - | chr5.2:32869602-32869621 | None:intergenic | 45.0% |
| ! | TAGGGTGTCCTTGAATGAAG+AGG | + | chr5.2:32867713-32867732 | MS.gene78555:intron | 45.0% |
| ! | TCTGGTTTGTCATGGTAGAG+AGG | - | chr5.2:32867145-32867164 | None:intergenic | 45.0% |
| ! | TTGGCTTGAATGGACGTGTT+TGG | + | chr5.2:32871669-32871688 | MS.gene78555:CDS | 45.0% |
| !! | CAGATCAAGGGTTAGTTTGC+AGG | - | chr5.2:32871113-32871132 | None:intergenic | 45.0% |
| !! | CCTAGATTTTTAGGCTTGGG+AGG | + | chr5.2:32867337-32867356 | MS.gene78555:intron | 45.0% |
| !! | GAGATAGCTGTTGGCTTGAA+TGG | + | chr5.2:32871659-32871678 | MS.gene78555:CDS | 45.0% |
| !! | GAGTTTGGTGCCCTAAAAGA+AGG | + | chr5.2:32871459-32871478 | MS.gene78555:CDS | 45.0% |
| !!! | TATCTATTTTATATAAAAAA+GGG | - | chr5.2:32870159-32870178 | None:intergenic | 5.0% |
| AAACTCTCCAGCTTTCCCAC+TGG | - | chr5.2:32871445-32871464 | None:intergenic | 50.0% | |
| AGAGGCAAGATTTCTCGAGC+AGG | - | chr5.2:32870550-32870569 | None:intergenic | 50.0% | |
| AGCTTTCATGCACGGATGGT+TGG | + | chr5.2:32871283-32871302 | MS.gene78555:intron | 50.0% | |
| AGTGGGAAAGCTGGAGAGTT+TGG | + | chr5.2:32871444-32871463 | MS.gene78555:CDS | 50.0% | |
| CCTCCTTCAAATGCAAGCAC+CGG | - | chr5.2:32869966-32869985 | None:intergenic | 50.0% | |
| CGCCTCCAAGCTTAATAGTC+TGG | - | chr5.2:32867163-32867182 | None:intergenic | 50.0% | |
| CGGGTTGTTAAAGCAATCCC+TGG | + | chr5.2:32871249-32871268 | MS.gene78555:CDS | 50.0% | |
| CTACCGGTGCTTGCATTTGA+AGG | + | chr5.2:32869960-32869979 | MS.gene78555:CDS | 50.0% | |
| CTCTCGTTCGAGATAGCTGT+TGG | + | chr5.2:32871650-32871669 | MS.gene78555:CDS | 50.0% | |
| GCTTGTAAGGCCTTCAATGC+TGG | + | chr5.2:32867638-32867657 | MS.gene78555:intron | 50.0% | |
| GTTAAACGGTTGTCATGGCG+TGG | + | chr5.2:32869395-32869414 | MS.gene78555:intron | 50.0% | |
| TAATGAAGGCTGGCAGGCTT+AGG | + | chr5.2:32868304-32868323 | MS.gene78555:CDS | 50.0% | |
| TACGCCATGCCTCATAGTCT+TGG | - | chr5.2:32870888-32870907 | None:intergenic | 50.0% | |
| TGTTTAGCCAGTGGGAAAGC+TGG | + | chr5.2:32871435-32871454 | MS.gene78555:intron | 50.0% | |
| TTGTGAATGAATGCCCGCCA+TGG | + | chr5.2:32869447-32869466 | MS.gene78555:intron | 50.0% | |
| ! | AAGCAAAGCACCAACCTGCA+AGG | - | chr5.2:32871223-32871242 | None:intergenic | 50.0% |
| AAACGGTTGTCATGGCGTGG+CGG | + | chr5.2:32869398-32869417 | MS.gene78555:intron | 55.0% | |
| ACAGTATGTGCCGCATGCAG+AGG | + | chr5.2:32869014-32869033 | MS.gene78555:intron | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr5.2:32869827-32869846 | None:intergenic | 55.0% | |
| AGGTCAAGAACCACATCGCC+AGG | - | chr5.2:32867125-32867144 | None:intergenic | 55.0% | |
| CCATCCGTGCATGAAAGCTC+AGG | - | chr5.2:32871282-32871301 | None:intergenic | 55.0% | |
| CCGGTGCTTGCATTTGAAGG+AGG | + | chr5.2:32869963-32869982 | MS.gene78555:CDS | 55.0% | |
| CCTGAGCTTTCATGCACGGA+TGG | + | chr5.2:32871279-32871298 | MS.gene78555:CDS | 55.0% | |
| GCAAGATTTCTCGAGCAGGC+TGG | - | chr5.2:32870546-32870565 | None:intergenic | 55.0% | |
| GGCTGAAAAGCTGCTGCAGA+GGG | + | chr5.2:32871919-32871938 | MS.gene78555:CDS | 55.0% | |
| GTGGCCAAGACTATGAGGCA+TGG | + | chr5.2:32870881-32870900 | MS.gene78555:intron | 55.0% | |
| TGAATGAATGCCCGCCATGG+AGG | + | chr5.2:32869450-32869469 | MS.gene78555:intron | 55.0% | |
| TGGCTGAAAAGCTGCTGCAG+AGG | + | chr5.2:32871918-32871937 | MS.gene78555:CDS | 55.0% | |
| TGTAGCCGACCCCACTTAGT+AGG | + | chr5.2:32869827-32869846 | MS.gene78555:intron | 55.0% | |
| !! | GTCATGGCGTGGCGGATATT+TGG | + | chr5.2:32869406-32869425 | MS.gene78555:intron | 55.0% |
| GGGTACACTCGGGATGCTCA+CGG | + | chr5.2:32870626-32870645 | MS.gene78555:intron | 60.0% | |
| GGTACACTCGGGATGCTCAC+GGG | + | chr5.2:32870627-32870646 | MS.gene78555:intron | 60.0% | |
| ATCTGTGGCCGTGTGGGCAG+TGG | - | chr5.2:32870954-32870973 | None:intergenic | 65.0% | |
| GCTTGGAGGCGGTCTTCGTC+AGG | + | chr5.2:32867172-32867191 | MS.gene78555:CDS | 65.0% | |
| GGAGGCGGTCTTCGTCAGGT+AGG | + | chr5.2:32867176-32867195 | MS.gene78555:intron | 65.0% | |
| TGTGACCCACGGTGCCTCCA+TGG | - | chr5.2:32869467-32869486 | None:intergenic | 65.0% | |
| ACCCACGGTGCCTCCATGGC+GGG | - | chr5.2:32869463-32869482 | None:intergenic | 70.0% | |
| GACCCACGGTGCCTCCATGG+CGG | - | chr5.2:32869464-32869483 | None:intergenic | 70.0% | |
| !! | GCCCGCCATGGAGGCACCGT+GGG | + | chr5.2:32869459-32869478 | MS.gene78555:intron | 75.0% |
| !! | TGCCCGCCATGGAGGCACCG+TGG | + | chr5.2:32869458-32869477 | MS.gene78555:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 32866978 | 32871949 | 32866978 | ID=MS.gene78555 |
| chr5.2 | mRNA | 32866978 | 32871949 | 32866978 | ID=MS.gene78555.t1;Parent=MS.gene78555 |
| chr5.2 | exon | 32866978 | 32867028 | 32866978 | ID=MS.gene78555.t1.exon1;Parent=MS.gene78555.t1 |
| chr5.2 | CDS | 32866978 | 32867028 | 32866978 | ID=cds.MS.gene78555.t1;Parent=MS.gene78555.t1 |
| chr5.2 | exon | 32867119 | 32867193 | 32867119 | ID=MS.gene78555.t1.exon2;Parent=MS.gene78555.t1 |
| chr5.2 | CDS | 32867119 | 32867193 | 32867119 | ID=cds.MS.gene78555.t1;Parent=MS.gene78555.t1 |
| chr5.2 | exon | 32868285 | 32868371 | 32868285 | ID=MS.gene78555.t1.exon3;Parent=MS.gene78555.t1 |
| chr5.2 | CDS | 32868285 | 32868371 | 32868285 | ID=cds.MS.gene78555.t1;Parent=MS.gene78555.t1 |
| chr5.2 | exon | 32869018 | 32869074 | 32869018 | ID=MS.gene78555.t1.exon4;Parent=MS.gene78555.t1 |
| chr5.2 | CDS | 32869018 | 32869074 | 32869018 | ID=cds.MS.gene78555.t1;Parent=MS.gene78555.t1 |
| chr5.2 | exon | 32869921 | 32870013 | 32869921 | ID=MS.gene78555.t1.exon5;Parent=MS.gene78555.t1 |
| chr5.2 | CDS | 32869921 | 32870013 | 32869921 | ID=cds.MS.gene78555.t1;Parent=MS.gene78555.t1 |
| chr5.2 | exon | 32871228 | 32871300 | 32871228 | ID=MS.gene78555.t1.exon6;Parent=MS.gene78555.t1 |
| chr5.2 | CDS | 32871228 | 32871300 | 32871228 | ID=cds.MS.gene78555.t1;Parent=MS.gene78555.t1 |
| chr5.2 | exon | 32871442 | 32871517 | 32871442 | ID=MS.gene78555.t1.exon7;Parent=MS.gene78555.t1 |
| chr5.2 | CDS | 32871442 | 32871517 | 32871442 | ID=cds.MS.gene78555.t1;Parent=MS.gene78555.t1 |
| chr5.2 | exon | 32871601 | 32871691 | 32871601 | ID=MS.gene78555.t1.exon8;Parent=MS.gene78555.t1 |
| chr5.2 | CDS | 32871601 | 32871691 | 32871601 | ID=cds.MS.gene78555.t1;Parent=MS.gene78555.t1 |
| chr5.2 | exon | 32871830 | 32871949 | 32871830 | ID=MS.gene78555.t1.exon9;Parent=MS.gene78555.t1 |
| chr5.2 | CDS | 32871830 | 32871949 | 32871830 | ID=cds.MS.gene78555.t1;Parent=MS.gene78555.t1 |
| Gene Sequence |
| Protein sequence |
