AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052951

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052951.t1 MTR_0147s0010 84.800 375 39 5 21 391 21 381 0.0 577
MS.gene052951.t1 MTR_2g067440 49.085 328 156 4 74 391 60 386 2.16e-101 306
MS.gene052951.t1 MTR_2g077990 48.788 330 157 4 74 391 76 405 5.80e-99 300
MS.gene052951.t1 MTR_2g078610 48.182 330 159 4 74 391 76 405 1.32e-98 299
MS.gene052951.t1 MTR_2g078280 49.211 317 149 4 74 378 76 392 3.29e-95 290
MS.gene052951.t1 MTR_2g029850 41.411 326 168 4 69 391 24 329 5.32e-80 250
MS.gene052951.t1 MTR_2g067450 42.105 323 158 5 74 391 11 309 3.36e-79 246
MS.gene052951.t1 MTR_2g029820 39.571 326 174 4 69 391 24 329 1.84e-76 241
MS.gene052951.t1 MTR_4g114210 41.104 326 161 7 71 390 18 318 2.32e-76 239
MS.gene052951.t1 MTR_4g125940 41.304 322 162 5 72 388 26 325 3.18e-76 239
MS.gene052951.t1 MTR_1g054205 40.061 327 172 6 70 392 20 326 3.07e-75 237
MS.gene052951.t1 MTR_2g029860 38.769 325 176 4 70 391 25 329 4.02e-75 237
MS.gene052951.t1 MTR_2g040000 40.938 320 161 4 78 391 33 330 7.36e-75 236
MS.gene052951.t1 MTR_2g008710 40.823 316 159 5 78 389 31 322 1.35e-74 235
MS.gene052951.t1 MTR_3g092990 41.104 326 172 3 67 391 19 325 1.65e-74 235
MS.gene052951.t1 MTR_0155s0040 38.509 322 168 3 70 391 23 314 1.81e-74 234
MS.gene052951.t1 MTR_1g077000 39.937 318 161 4 74 391 39 326 2.54e-74 234
MS.gene052951.t1 MTR_2g088770 37.920 327 180 6 67 391 19 324 2.69e-74 234
MS.gene052951.t1 MTR_2g029815 39.692 325 173 4 70 391 25 329 3.51e-74 235
MS.gene052951.t1 MTR_2g099175 40.125 319 164 5 74 388 36 331 5.12e-74 234
MS.gene052951.t1 MTR_1g086490 40.060 332 184 5 63 391 20 339 5.67e-74 234
MS.gene052951.t1 MTR_2g029800 38.344 326 178 4 69 391 24 329 1.56e-73 233
MS.gene052951.t1 MTR_2g029910 38.957 326 177 4 69 391 25 331 3.14e-73 232
MS.gene052951.t1 MTR_2g029830 39.264 326 175 4 69 391 23 328 5.75e-73 232
MS.gene052951.t1 MTR_4g046713 38.390 323 178 4 68 389 21 323 1.24e-72 230
MS.gene052951.t1 MTR_1g022970 43.302 321 159 5 74 391 46 346 1.32e-72 231
MS.gene052951.t1 MTR_1g101830 39.130 322 173 4 70 391 23 321 3.49e-72 229
MS.gene052951.t1 MTR_7g107520 39.937 318 168 4 74 391 25 319 3.91e-72 228
MS.gene052951.t1 MTR_1g086320 40.060 332 177 5 63 391 20 332 3.94e-72 229
MS.gene052951.t1 MTR_5g074970 37.578 322 175 5 72 391 28 325 4.93e-72 228
MS.gene052951.t1 MTR_7g093370 38.344 326 177 5 70 391 65 370 6.87e-72 229
MS.gene052951.t1 MTR_7g086820 37.539 317 168 4 74 388 20 308 3.22e-71 226
MS.gene052951.t1 MTR_8g062780 41.401 314 163 3 77 388 26 320 3.35e-71 226
MS.gene052951.t1 MTR_2g029740 38.889 324 175 4 69 389 24 327 3.52e-71 227
MS.gene052951.t1 MTR_2g028980 38.769 325 176 4 70 391 25 329 5.13e-71 227
MS.gene052951.t1 MTR_2g029750 39.264 326 175 4 69 391 24 329 5.43e-71 226
MS.gene052951.t1 MTR_1g025980 38.838 327 176 3 66 392 16 318 5.97e-71 225
MS.gene052951.t1 MTR_4g029200 39.875 321 165 4 72 391 44 337 9.27e-71 226
MS.gene052951.t1 MTR_5g017850 37.578 322 178 5 72 391 25 325 1.70e-70 224
MS.gene052951.t1 MTR_2g029730 38.602 329 163 4 74 391 25 325 2.44e-70 224
MS.gene052951.t1 MTR_2g084080 36.420 324 178 4 69 391 20 316 5.79e-70 223
MS.gene052951.t1 MTR_5g017860 37.888 322 177 5 72 391 25 325 1.14e-69 222
MS.gene052951.t1 MTR_8g075100 38.580 324 172 5 69 391 21 318 2.07e-69 221
MS.gene052951.t1 MTR_4g029190 39.820 334 170 6 62 391 33 339 6.25e-69 221
MS.gene052951.t1 MTR_3g094650 36.533 323 179 3 69 390 23 320 1.29e-68 219
MS.gene052951.t1 MTR_5g022870 38.580 324 172 5 69 391 18 315 2.11e-68 219
MS.gene052951.t1 MTR_4g125940 41.812 287 140 5 107 388 6 270 3.28e-68 217
MS.gene052951.t1 MTR_2g084110 35.890 326 181 4 67 391 18 316 7.46e-68 217
MS.gene052951.t1 MTR_4g122640 37.237 333 185 5 61 391 25 335 9.00e-68 218
MS.gene052951.t1 MTR_7g072510 37.975 316 168 5 74 388 20 308 1.52e-67 216
MS.gene052951.t1 MTR_6g027440 37.618 319 166 5 74 388 21 310 1.79e-67 216
MS.gene052951.t1 MTR_2g029560 37.855 317 174 4 78 391 28 324 6.23e-67 216
MS.gene052951.t1 MTR_3g466200 34.356 326 187 4 68 391 19 319 9.12e-67 214
MS.gene052951.t1 MTR_1g090760 37.730 326 181 4 68 390 22 328 1.22e-66 215
MS.gene052951.t1 MTR_5g021060 38.291 316 173 4 78 391 34 329 1.28e-66 214
MS.gene052951.t1 MTR_4g083710 38.226 327 177 6 67 391 20 323 2.93e-66 213
MS.gene052951.t1 MTR_4g133800 37.261 314 169 5 79 391 46 332 3.94e-66 213
MS.gene052951.t1 MTR_3g466180 38.871 319 167 4 74 391 31 322 5.78e-66 213
MS.gene052951.t1 MTR_7g086870 38.924 316 162 5 74 388 22 307 1.09e-65 211
MS.gene052951.t1 MTR_3g072190 36.697 327 179 5 66 391 18 317 1.83e-65 211
MS.gene052951.t1 MTR_1g038680 38.415 328 165 6 75 391 30 331 4.78e-65 211
MS.gene052951.t1 MTR_7g072480 37.618 319 171 5 74 391 24 315 6.13e-65 210
MS.gene052951.t1 MTR_3g094670 36.842 323 178 3 69 390 23 320 6.48e-65 210
MS.gene052951.t1 MTR_2g084010 35.474 327 182 6 67 391 18 317 6.63e-65 210
MS.gene052951.t1 MTR_5g083860 35.474 327 185 3 66 391 23 324 1.26e-64 209
MS.gene052951.t1 MTR_2g084020 34.769 325 183 6 69 391 20 317 1.63e-64 209
MS.gene052951.t1 MTR_2g084090 35.276 326 184 4 67 391 18 317 1.86e-64 209
MS.gene052951.t1 MTR_3g092990 38.957 326 168 4 67 391 19 314 1.26e-63 206
MS.gene052951.t1 MTR_5g016010 34.954 329 190 4 67 391 20 328 4.13e-63 205
MS.gene052951.t1 MTR_4g087965 37.695 321 176 5 74 389 42 343 4.66e-63 206
MS.gene052951.t1 MTR_8g076820 37.578 322 179 4 72 391 28 329 5.73e-63 205
MS.gene052951.t1 MTR_4g029170 35.604 323 178 6 72 391 25 320 5.85e-63 205
MS.gene052951.t1 MTR_7g029030 37.309 327 174 6 68 390 19 318 1.77e-62 203
MS.gene052951.t1 MTR_1g115900 36.278 317 174 5 74 388 27 317 1.46e-61 201
MS.gene052951.t1 MTR_4g012865 82.400 125 17 2 21 141 21 144 1.58e-61 195
MS.gene052951.t1 MTR_3g094630 35.077 325 185 4 69 392 23 322 3.82e-61 200
MS.gene052951.t1 MTR_2g084000 34.969 326 183 6 68 391 20 318 4.64e-61 200
MS.gene052951.t1 MTR_5g033470 38.050 318 177 5 74 388 73 373 1.00e-60 201
MS.gene052951.t1 MTR_2g437770 35.093 322 180 7 71 391 47 340 1.25e-60 199
MS.gene052951.t1 MTR_4g074995 36.697 327 169 8 67 391 17 307 1.33e-60 198
MS.gene052951.t1 MTR_4g029180 34.906 318 177 7 77 391 30 320 2.86e-60 198
MS.gene052951.t1 MTR_7g026990 36.615 325 173 5 67 388 24 318 3.87e-60 197
MS.gene052951.t1 MTR_5g074860 35.866 329 177 7 70 392 25 325 3.92e-60 197
MS.gene052951.t1 MTR_4g132110 35.802 324 186 4 66 389 24 325 5.71e-59 195
MS.gene052951.t1 MTR_5g049280 34.347 329 190 7 69 391 28 336 9.39e-59 194
MS.gene052951.t1 MTR_4g074990 35.938 320 164 6 74 391 24 304 1.32e-58 193
MS.gene052951.t1 MTR_5g074760 35.802 324 174 7 74 391 25 320 4.52e-58 192
MS.gene052951.t1 MTR_6g043240 34.375 320 177 5 74 391 42 330 4.96e-58 193
MS.gene052951.t1 MTR_6g043460 36.593 317 171 5 74 388 36 324 8.53e-58 192
MS.gene052951.t1 MTR_5g014100 36.254 331 180 6 70 391 22 330 1.04e-57 191
MS.gene052951.t1 MTR_3g105790 36.111 324 182 5 68 389 19 319 1.44e-57 191
MS.gene052951.t1 MTR_1g009750 36.025 322 181 5 74 391 27 327 1.46e-57 191
MS.gene052951.t1 MTR_2g029830 39.130 276 145 4 119 391 5 260 1.53e-57 190
MS.gene052951.t1 MTR_4g074980 35.185 324 159 7 69 391 20 293 1.56e-57 190
MS.gene052951.t1 MTR_4g030890 34.769 325 188 4 68 391 94 395 4.00e-57 192
MS.gene052951.t1 MTR_4g127670 36.449 321 177 5 74 390 24 321 4.87e-57 189
MS.gene052951.t1 MTR_2g008730 36.392 316 149 5 78 389 31 298 6.14e-57 189
MS.gene052951.t1 MTR_3g467600 34.743 331 183 8 67 391 20 323 8.81e-57 189
MS.gene052951.t1 MTR_4g132110 35.258 329 186 5 66 389 24 330 1.14e-56 189
MS.gene052951.t1 MTR_4g132490 35.110 319 185 4 74 391 29 326 1.19e-55 186
MS.gene052951.t1 MTR_4g031140 33.333 315 186 5 78 391 32 323 1.21e-55 186
MS.gene052951.t1 MTR_5g074740 34.259 324 179 7 74 391 25 320 1.41e-55 186
MS.gene052951.t1 MTR_4g095450 35.312 320 178 5 74 389 27 321 9.47e-55 184
MS.gene052951.t1 MTR_5g074710 33.951 324 180 7 74 391 25 320 1.01e-54 183
MS.gene052951.t1 MTR_2g008160 34.049 326 186 7 69 389 19 320 1.35e-54 183
MS.gene052951.t1 MTR_6g043280 32.036 334 194 7 62 391 27 331 1.59e-54 183
MS.gene052951.t1 MTR_1g066710 31.875 320 196 3 72 391 25 322 1.24e-53 181
MS.gene052951.t1 MTR_3g072190 36.594 276 147 5 117 391 2 250 1.49e-53 178
MS.gene052951.t1 MTR_0286s0010 32.615 325 195 5 70 391 30 333 3.60e-53 180
MS.gene052951.t1 MTR_6g008075 32.615 325 195 5 70 391 30 333 3.60e-53 180
MS.gene052951.t1 MTR_4g074980 43.386 189 106 1 69 256 20 208 4.97e-52 174
MS.gene052951.t1 MTR_1g066380 31.250 320 198 3 72 391 25 322 1.23e-51 176
MS.gene052951.t1 MTR_1g066640 31.562 320 197 3 72 391 25 322 3.73e-51 174
MS.gene052951.t1 MTR_1g066680 31.861 317 193 4 72 388 25 318 9.53e-51 173
MS.gene052951.t1 MTR_2g078560 42.793 222 116 2 181 391 98 319 3.86e-50 171
MS.gene052951.t1 MTR_1g009750 33.962 318 176 5 74 391 27 310 4.40e-48 166
MS.gene052951.t1 MTR_0147s0040 87.805 82 10 0 310 391 1 82 8.32e-46 152
MS.gene052951.t1 MTR_2g077980 33.818 275 161 4 136 391 11 283 6.65e-41 146
MS.gene052951.t1 MTR_2g008160 29.755 326 165 7 69 389 19 285 8.81e-40 143
MS.gene052951.t1 MTR_1g066380 31.022 274 167 3 118 391 3 254 3.23e-39 141
MS.gene052951.t1 MTR_2g008160 40.113 177 103 2 69 245 19 192 5.92e-39 139
MS.gene052951.t1 MTR_3g105790 35.271 258 145 4 134 389 6 243 2.99e-37 135
MS.gene052951.t1 MTR_5g074860 43.210 162 88 3 70 227 25 186 3.01e-34 128
MS.gene052951.t1 MTR_2g029880 33.175 211 109 3 183 391 7 187 1.98e-30 116
MS.gene052951.t1 MTR_5g074700 30.522 249 130 6 146 391 5 213 2.93e-30 116
MS.gene052951.t1 MTR_3g072260 50.943 106 51 1 77 181 29 134 2.57e-27 105
MS.gene052951.t1 MTR_6g048160 63.380 71 23 1 112 182 21 88 8.63e-24 94.7
MS.gene052951.t1 MTR_7g072490 50.526 95 46 1 120 213 2 96 7.46e-23 95.9
MS.gene052951.t1 MTR_7g086790 37.838 148 73 3 121 268 17 145 2.09e-21 91.3
MS.gene052951.t1 MTR_3g072210 30.000 210 118 6 184 391 55 237 2.65e-19 86.7
MS.gene052951.t1 MTR_1g089005 39.496 119 66 1 72 184 13 131 2.75e-19 84.3
MS.gene052951.t1 MTR_4g114220 48.193 83 34 2 98 180 27 100 3.64e-18 80.9
MS.gene052951.t1 MTR_7g086810 31.933 119 56 1 74 192 6 99 8.92e-14 70.9
MS.gene052951.t1 MTR_5g058120 28.889 180 97 3 209 388 7 155 2.44e-13 69.7
MS.gene052951.t1 MTR_7g086785 40.541 74 44 0 119 192 3 76 7.47e-13 65.9
MS.gene052951.t1 MTR_6g071110 39.773 88 41 2 141 228 81 156 1.98e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052951.t1 AT4G33870 53.274 336 140 4 72 391 66 400 1.72e-116 345
MS.gene052951.t1 AT5G06720 39.640 333 178 4 63 392 21 333 1.21e-76 241
MS.gene052951.t1 AT1G49570 39.080 348 183 6 45 389 26 347 1.83e-76 241
MS.gene052951.t1 AT2G38390 39.514 329 175 6 67 391 24 332 5.70e-75 237
MS.gene052951.t1 AT3G01190 38.291 316 170 6 74 388 26 317 1.23e-74 235
MS.gene052951.t1 AT1G05240 36.562 320 178 4 73 389 25 322 1.33e-74 235
MS.gene052951.t1 AT1G05250 36.562 320 178 4 73 389 25 322 1.33e-74 235
MS.gene052951.t1 AT5G17820 39.498 319 160 6 74 390 24 311 1.45e-74 234
MS.gene052951.t1 AT5G51890 39.557 316 169 4 70 385 22 315 1.56e-74 235
MS.gene052951.t1 AT2G38380 38.906 329 177 5 67 391 24 332 4.31e-74 234
MS.gene052951.t1 AT3G03670 39.048 315 172 2 74 388 23 317 5.44e-74 233
MS.gene052951.t1 AT5G06730 38.253 332 182 4 63 391 22 333 1.18e-73 234
MS.gene052951.t1 AT5G64120 38.217 314 169 5 78 391 39 327 3.84e-73 231
MS.gene052951.t1 AT5G17820 39.498 319 160 6 74 390 77 364 4.25e-73 233
MS.gene052951.t1 AT2G41480 40.798 326 164 7 71 391 26 327 5.91e-73 231
MS.gene052951.t1 AT5G15180 36.991 319 178 5 74 391 32 328 8.14e-73 231
MS.gene052951.t1 AT5G24070 40.252 318 166 6 74 388 35 331 4.61e-72 229
MS.gene052951.t1 AT1G44970 41.720 314 160 4 78 388 49 342 9.60e-72 228
MS.gene052951.t1 AT4G33420 38.994 318 164 4 74 391 37 324 1.65e-71 227
MS.gene052951.t1 AT4G33420 38.994 318 164 4 74 391 84 371 3.90e-71 228
MS.gene052951.t1 AT2G43480 40.184 326 161 7 74 391 35 334 4.57e-71 226
MS.gene052951.t1 AT4G11290 37.037 324 183 4 70 391 21 325 1.08e-70 225
MS.gene052951.t1 AT4G08770 38.788 330 175 6 68 391 18 326 2.28e-70 225
MS.gene052951.t1 AT4G36430 37.342 316 176 3 78 391 34 329 1.54e-69 222
MS.gene052951.t1 AT1G05260 38.486 317 174 4 74 389 26 322 2.70e-69 221
MS.gene052951.t1 AT2G18140 38.050 318 173 5 77 391 38 334 6.42e-69 221
MS.gene052951.t1 AT5G42180 36.508 315 176 4 78 392 27 317 4.52e-68 218
MS.gene052951.t1 AT3G21770 37.771 323 178 5 69 389 24 325 5.18e-68 218
MS.gene052951.t1 AT4G16270 35.493 355 205 5 39 391 15 347 1.25e-67 218
MS.gene052951.t1 AT2G18150 37.539 317 174 5 78 391 40 335 1.60e-67 217
MS.gene052951.t1 AT3G32980 38.066 331 178 5 67 391 24 333 2.21e-67 217
MS.gene052951.t1 AT3G49110 38.182 330 179 5 67 391 26 335 2.66e-67 217
MS.gene052951.t1 AT3G50990 37.879 330 183 5 64 391 31 340 2.95e-67 217
MS.gene052951.t1 AT5G66390 37.658 316 175 4 78 391 37 332 3.64e-67 216
MS.gene052951.t1 AT5G19890 38.125 320 167 7 74 388 30 323 4.03e-67 216
MS.gene052951.t1 AT4G08780 37.576 330 179 6 68 391 18 326 4.40e-67 216
MS.gene052951.t1 AT5G39580 39.683 315 164 6 78 391 29 318 1.04e-66 214
MS.gene052951.t1 AT4G37530 37.037 324 180 4 70 389 23 326 4.64e-66 213
MS.gene052951.t1 AT5G19880 38.415 328 176 6 70 391 21 328 4.69e-66 213
MS.gene052951.t1 AT4G17690 37.539 317 172 4 74 388 26 318 5.82e-65 210
MS.gene052951.t1 AT5G05340 33.832 334 189 4 59 391 21 323 7.03e-65 210
MS.gene052951.t1 AT3G49120 37.576 330 181 5 67 391 25 334 1.72e-64 210
MS.gene052951.t1 AT5G58390 38.957 326 172 5 67 390 14 314 2.23e-64 208
MS.gene052951.t1 AT4G26010 37.658 316 164 6 74 388 22 305 2.50e-64 208
MS.gene052951.t1 AT1G30870 37.037 324 172 7 71 390 48 343 2.60e-64 209
MS.gene052951.t1 AT2G18980 38.602 329 174 5 67 391 18 322 3.64e-64 208
MS.gene052951.t1 AT4G26010 37.658 316 164 6 74 388 50 333 5.06e-64 208
MS.gene052951.t1 AT3G28200 38.462 325 173 5 69 391 16 315 7.80e-64 207
MS.gene052951.t1 AT4G31760 38.154 325 176 3 69 391 24 325 1.53e-63 206
MS.gene052951.t1 AT5G22410 38.509 322 163 8 74 388 28 321 2.28e-63 206
MS.gene052951.t1 AT5G14130 37.963 324 177 5 68 389 26 327 2.89e-63 206
MS.gene052951.t1 AT2G24800 38.438 320 173 5 74 391 31 328 4.41e-63 205
MS.gene052951.t1 AT1G68850 35.276 326 182 7 74 391 30 334 6.94e-63 205
MS.gene052951.t1 AT5G64110 37.539 317 170 6 78 391 38 329 1.00e-62 204
MS.gene052951.t1 AT5G14130 37.963 324 177 5 68 389 67 368 1.22e-62 206
MS.gene052951.t1 AT4G30170 37.267 322 174 6 74 391 27 324 2.70e-62 203
MS.gene052951.t1 AT5G47000 35.604 323 183 4 68 388 27 326 2.93e-62 203
MS.gene052951.t1 AT1G14550 36.778 329 179 6 66 391 18 320 3.74e-62 203
MS.gene052951.t1 AT5G40150 37.386 329 176 5 67 391 25 327 5.35e-62 202
MS.gene052951.t1 AT1G14540 38.272 324 172 6 70 391 17 314 1.04e-61 201
MS.gene052951.t1 AT1G71695 36.562 320 172 6 74 389 44 336 1.42e-60 200
MS.gene052951.t1 AT5G64100 35.220 318 174 6 78 391 41 330 4.90e-60 197
MS.gene052951.t1 AT2G35380 39.062 320 170 8 78 391 34 334 7.12e-60 197
MS.gene052951.t1 AT5G58400 36.308 325 180 6 68 390 24 323 1.22e-59 196
MS.gene052951.t1 AT4G37520 35.312 320 183 5 74 389 27 326 2.28e-59 196
MS.gene052951.t1 AT4G21960 36.810 326 184 4 64 389 21 324 2.34e-59 196
MS.gene052951.t1 AT2G39040 36.471 340 189 8 58 391 31 349 2.61e-59 196
MS.gene052951.t1 AT3G17070 35.135 333 193 6 63 392 27 339 4.00e-59 196
MS.gene052951.t1 AT3G49960 35.385 325 186 4 69 389 22 326 2.26e-58 193
MS.gene052951.t1 AT5G67400 34.441 331 193 4 63 389 16 326 3.17e-58 193
MS.gene052951.t1 AT4G25980 34.769 325 176 6 74 389 26 323 5.04e-58 192
MS.gene052951.t1 AT1G34510 34.177 316 175 5 74 388 22 305 1.52e-57 191
MS.gene052951.t1 AT4G37520 34.688 320 182 6 74 389 27 323 6.30e-57 189
MS.gene052951.t1 AT1G77100 33.846 325 182 7 70 389 20 316 9.23e-56 186
MS.gene052951.t1 AT4G37530 37.319 276 149 4 70 341 23 278 2.31e-55 184
MS.gene052951.t1 AT2G22420 34.603 315 182 3 78 391 27 318 1.65e-54 183
MS.gene052951.t1 AT2G34060 35.202 321 182 6 74 388 42 342 1.38e-53 181
MS.gene052951.t1 AT2G37130 32.198 323 196 4 70 391 26 326 8.49e-52 176
MS.gene052951.t1 AT1G24110 33.750 320 188 5 74 390 22 320 7.18e-51 174
MS.gene052951.t1 AT2G37130 31.962 316 192 4 77 391 2 295 2.46e-50 171
MS.gene052951.t1 AT2G24800 45.238 168 89 1 74 241 31 195 7.57e-42 147
MS.gene052951.t1 AT3G17070 34.286 280 160 7 116 392 18 276 9.17e-42 148
MS.gene052951.t1 AT5G39580 47.205 161 81 2 78 238 29 185 1.08e-41 147
MS.gene052951.t1 AT4G25980 41.916 167 94 2 74 240 71 234 3.28e-40 144
MS.gene052951.t1 AT2G35380 37.262 263 140 8 135 391 3 246 2.56e-39 141
MS.gene052951.t1 AT3G42570 37.190 121 66 2 130 240 29 149 2.14e-16 76.3

Find 71 sgRNAs with CRISPR-Local

Find 188 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTCAAGCTTGGATTTAA+TGG 0.173312 4.1:+83543563 None:intergenic
TTGATGGAAGATATAGAATT+TGG 0.195232 4.1:+83544823 None:intergenic
GGGAATCTCTATCGAATTTC+AGG 0.228087 4.1:-83541986 MS.gene052951:CDS
TAATGAACCTGACCCTTCTT+TGG 0.235705 4.1:-83542144 MS.gene052951:CDS
AGAATCAGAAGAATTAATTT+TGG 0.264779 4.1:+83544943 None:intergenic
AGAGAAATGGTCACTCTCTT+AGG 0.301570 4.1:-83542831 MS.gene052951:intron
TGCAAGAGGTTCTGTTGTTC+TGG 0.307923 4.1:-83543496 MS.gene052951:intron
GTATTCTTGAACCCAATATC+TGG 0.331487 4.1:+83541887 None:intergenic
ATCAAATCCCCTTGATTTGA+AGG 0.342803 4.1:+83542857 None:intergenic
TTACAAAACTAATCCTGCTT+TGG 0.358007 4.1:-83544674 MS.gene052951:CDS
CTATGAAGATCAGCAGCTAA+TGG 0.384430 4.1:-83541922 MS.gene052951:CDS
TGATGGAAGATATAGAATTT+GGG 0.389856 4.1:+83544824 None:intergenic
CCGTTCTATCCTTTGAATAC+AGG 0.391059 4.1:-83542966 MS.gene052951:CDS
CTCTTGCATCCTTCAAATCA+AGG 0.406426 4.1:-83542866 MS.gene052951:CDS
AGGACATGCTTCTTCAAGCT+TGG 0.408651 4.1:+83543554 None:intergenic
CTATTACATCAAATCCTTTG+AGG 0.413058 4.1:+83543589 None:intergenic
TTGCAAGGGCAAAATCTTGA+TGG 0.437219 4.1:+83541844 None:intergenic
AATCCTTTGAGGCTATCATT+AGG 0.445147 4.1:+83543600 None:intergenic
AGAAATTCAGTATCCAAAGA+AGG 0.448061 4.1:+83542131 None:intergenic
TTGTTCGTTCTACGCTTCAC+CGG 0.448958 4.1:-83544699 MS.gene052951:CDS
GGGATTTGATGAAAGAGAAA+TGG 0.463559 4.1:-83542844 MS.gene052951:CDS
CTTCCAGGTGCCCACAGCAT+TGG 0.469196 4.1:-83542218 MS.gene052951:intron
TGCTCTTCAACTAATGAAGA+AGG 0.482256 4.1:+83542032 None:intergenic
AAGCTTGAAGAAGCATGTCC+TGG 0.495390 4.1:-83543552 MS.gene052951:CDS
AGAGCAACAAGAAATCACTA+TGG 0.503803 4.1:-83542015 MS.gene052951:CDS
AAGAAATCACTATGGACTCC+GGG 0.509209 4.1:-83542007 MS.gene052951:CDS
CGCAGACTATTACAAGGTAA+AGG 0.510150 4.1:-83541951 MS.gene052951:CDS
CAAAACCTATGGGACAGATT+CGG 0.515192 4.1:-83541791 MS.gene052951:CDS
TCAGTATCCAAAGAAGGGTC+AGG 0.516342 4.1:+83542137 None:intergenic
CCTCCTAATGATAGCCTCAA+AGG 0.519107 4.1:-83543603 MS.gene052951:CDS
ATGTACTGGAACAATGTTGA+TGG 0.528365 4.1:+83544861 None:intergenic
TCTTGCATCCTTCAAATCAA+GGG 0.531004 4.1:-83542865 MS.gene052951:CDS
ATAAGAGCAGGAACCAAAGC+AGG 0.535317 4.1:+83544661 None:intergenic
GAAATTCAGTATCCAAAGAA+GGG 0.536154 4.1:+83542132 None:intergenic
GAAGATCAGCAGCTAATGGA+AGG 0.548988 4.1:-83541918 MS.gene052951:CDS
CTGCGCCGAATCTGTCCCAT+AGG 0.555313 4.1:+83541786 None:intergenic
CAAGAAATCACTATGGACTC+CGG 0.557548 4.1:-83542008 MS.gene052951:CDS
TCCTTTGAATACAGGAAGGA+GGG 0.560437 4.1:-83542958 MS.gene052951:CDS
TCCCTCCTTCCTGTATTCAA+AGG 0.561425 4.1:+83542957 None:intergenic
TTAGCTGCTGATCTTCATAG+AGG 0.562285 4.1:+83541925 None:intergenic
ATTCTTGTACTTGCTGCAAG+AGG 0.564240 4.1:-83543510 MS.gene052951:CDS
AGGAGAGTTTCATCATTGCA+AGG 0.570715 4.1:+83541829 None:intergenic
TGAATATGCTGATGCTGAAG+TGG 0.571430 4.1:+83542067 None:intergenic
AGTTTGAGATAAATCTGCAT+AGG 0.573815 4.1:+83542887 None:intergenic
ATCCTTTGAATACAGGAAGG+AGG 0.575506 4.1:-83542959 MS.gene052951:CDS
TACCACTGAAGTTATAGAGA+CGG 0.576714 4.1:+83542168 None:intergenic
GAAATTCGATAGAGATTCCC+CGG 0.581532 4.1:+83541989 None:intergenic
GTTTGAGATAAATCTGCATA+GGG 0.582631 4.1:+83542888 None:intergenic
AGATCAGCAGCTAATGGAAG+GGG 0.582860 4.1:-83541916 MS.gene052951:CDS
GATAAATCTGCATAGGGTGA+AGG 0.583301 4.1:+83542894 None:intergenic
AAGATCAGCAGCTAATGGAA+GGG 0.584228 4.1:-83541917 MS.gene052951:CDS
TCAGCACAAGAAACAACTCC+AGG 0.586737 4.1:+83543534 None:intergenic
CTTGCATCCTTCAAATCAAG+GGG 0.587953 4.1:-83542864 MS.gene052951:CDS
AAAGCAAGACGAATAAGAGC+AGG 0.590078 4.1:+83544649 None:intergenic
TTGAATACAGGAAGGAGGGA+TGG 0.592411 4.1:-83542954 MS.gene052951:CDS
CCTTTGAGGCTATCATTAGG+AGG 0.595960 4.1:+83543603 None:intergenic
CTTTACCTTGTAATAGTCTG+CGG 0.596742 4.1:+83541952 None:intergenic
GTTGATGGAGTTGAATGTGT+TGG 0.602221 4.1:+83544876 None:intergenic
AACCGTCTCTATAACTTCAG+TGG 0.606555 4.1:-83542170 MS.gene052951:CDS
AGGGGATTACACCAATGCTG+TGG 0.609851 4.1:+83542207 None:intergenic
GGAGAGTTTCATCATTGCAA+GGG 0.610563 4.1:+83541830 None:intergenic
AAGAAGATGATTCTGATACA+TGG 0.617105 4.1:+83544782 None:intergenic
TTCAACTAATGAAGAAGGCG+AGG 0.617383 4.1:+83542037 None:intergenic
CCTGTATTCAAAGGATAGAA+CGG 0.621159 4.1:+83542966 None:intergenic
TACTACCGCAGACTATTACA+AGG 0.624819 4.1:-83541957 MS.gene052951:CDS
TCTATCCTTTGAATACAGGA+AGG 0.629877 4.1:-83542962 MS.gene052951:CDS
CGAACAATGTGTTCTGCATG+TGG 0.636060 4.1:+83544715 None:intergenic
GGGGATTACACCAATGCTGT+GGG 0.641154 4.1:+83542208 None:intergenic
CAAAGGATAGAACGGACCAC+CGG 0.642747 4.1:+83542974 None:intergenic
CTGCATGTGGACATGAACTA+CGG 0.677272 4.1:+83544728 None:intergenic
AGAAATCACTATGGACTCCG+GGG 0.690565 4.1:-83542006 MS.gene052951:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAAACAAGAAAATACA+TGG + chr4.1:83542162-83542181 None:intergenic 15.0%
!!! ATTCAAATTGTTTTCTTATA+AGG - chr4.1:83542772-83542791 MS.gene052951:intron 15.0%
!!! TATATATAAGCTCTTTAAAA+AGG + chr4.1:83544163-83544182 None:intergenic 15.0%
!!! TTATTATTTTTGTCATTTTC+TGG - chr4.1:83542217-83542236 MS.gene052951:intron 15.0%
!! AAAAGAAAGAAGAAAGAAAA+AGG + chr4.1:83542130-83542149 None:intergenic 20.0%
!! AAAGAAAGAAGAAAGAAAAA+GGG + chr4.1:83542129-83542148 None:intergenic 20.0%
!! AGACTATATGAAAAAATCTA+TGG + chr4.1:83542876-83542895 None:intergenic 20.0%
!! TAAAATAAATGTTTGTGATC+TGG - chr4.1:83543987-83544006 MS.gene052951:intron 20.0%
!! TATTTCCACAAATATCTAAA+TGG - chr4.1:83543645-83543664 MS.gene052951:CDS 20.0%
!!! AGAATCAGAAGAATTAATTT+TGG + chr4.1:83541791-83541810 None:intergenic 20.0%
!!! ATTAATTTTGGTAGTATCAA+TGG + chr4.1:83541779-83541798 None:intergenic 20.0%
!!! ATTTTTTCATATAGTCTCAA+AGG - chr4.1:83542879-83542898 MS.gene052951:CDS 20.0%
!!! TGTTTACCTTTTATAGATTT+AGG - chr4.1:83542650-83542669 MS.gene052951:intron 20.0%
!!! TTTGATAAGTTGATTTTTGA+AGG - chr4.1:83542424-83542443 MS.gene052951:intron 20.0%
! AAACTTGAAAAAGAATGTAC+TGG + chr4.1:83541887-83541906 None:intergenic 25.0%
! AATAAGCTGAAAAGAACATA+CGG - chr4.1:83542507-83542526 MS.gene052951:intron 25.0%
! ACATAGCCTAAATCTATAAA+AGG + chr4.1:83542659-83542678 None:intergenic 25.0%
! ACATTATGCTCTAATTTGAT+CGG + chr4.1:83543601-83543620 None:intergenic 25.0%
! GAAATTTATTGACCAAAGAT+TGG + chr4.1:83542277-83542296 None:intergenic 25.0%
! GATCAAAGAACAAAGAATTA+CGG + chr4.1:83544405-83544424 None:intergenic 25.0%
! TATATATTTCAGCTTAGACA+AGG - chr4.1:83544135-83544154 MS.gene052951:intron 25.0%
! TATCACCATTTAGATATTTG+TGG + chr4.1:83543653-83543672 None:intergenic 25.0%
! TCTAAGCTTGAATAATAGTA+AGG - chr4.1:83543447-83543466 MS.gene052951:intron 25.0%
! TGATCTTAACCCAAATTTAA+AGG - chr4.1:83544193-83544212 MS.gene052951:intron 25.0%
! TGATGGAAGATATAGAATTT+GGG + chr4.1:83541910-83541929 None:intergenic 25.0%
! TTATAGATTTAGGCTATGTT+TGG - chr4.1:83542660-83542679 MS.gene052951:intron 25.0%
! TTGATGGAAGATATAGAATT+TGG + chr4.1:83541911-83541930 None:intergenic 25.0%
! TTTCCAAAAACTCTTCAATA+TGG + chr4.1:83542817-83542836 None:intergenic 25.0%
!! TACCTTTTTCTATGAAACTT+GGG - chr4.1:83542977-83542996 MS.gene052951:CDS 25.0%
!! TAGGTGTATTTTCTTATTCA+TGG - chr4.1:83542243-83542262 MS.gene052951:intron 25.0%
!! TTACCTTTTTCTATGAAACT+TGG - chr4.1:83542976-83542995 MS.gene052951:CDS 25.0%
!!! TCGCAATTTTTTGAATACTT+CGG + chr4.1:83544070-83544089 None:intergenic 25.0%
!!! TGAATAATAGTAAGGTATTG+TGG - chr4.1:83543455-83543474 MS.gene052951:intron 25.0%
!!! TTTTGAAGGATTATATGTCA+TGG - chr4.1:83542438-83542457 MS.gene052951:intron 25.0%
AAAAGGGAAAAGTTCCTTTA+AGG + chr4.1:83544241-83544260 None:intergenic 30.0%
AAATACACACCAAACACTAA+GGG + chr4.1:83542949-83542968 None:intergenic 30.0%
AACCCAAGTTTCATAGAAAA+AGG + chr4.1:83542982-83543001 None:intergenic 30.0%
AACTGCAAAAAGTTTCATAG+AGG + chr4.1:83544282-83544301 None:intergenic 30.0%
AAGAAGATGATTCTGATACA+TGG + chr4.1:83541952-83541971 None:intergenic 30.0%
ACAACGATGACGAAATATAT+AGG + chr4.1:83543277-83543296 None:intergenic 30.0%
AGAAATTCAGTATCCAAAGA+AGG + chr4.1:83544603-83544622 None:intergenic 30.0%
ATAGAACTCAGAACATAGAT+AGG - chr4.1:83544307-83544326 MS.gene052951:intron 30.0%
ATTCTATATTGGAGAGCTTA+TGG - chr4.1:83542483-83542502 MS.gene052951:intron 30.0%
CAACGATGACGAAATATATA+GGG + chr4.1:83543276-83543295 None:intergenic 30.0%
CAGTTTAAAAAAACCAAACG+AGG + chr4.1:83543016-83543035 None:intergenic 30.0%
CTATTACATCAAATCCTTTG+AGG + chr4.1:83543145-83543164 None:intergenic 30.0%
CTTAACCCAAATTTAAAGGT+AGG - chr4.1:83544197-83544216 MS.gene052951:intron 30.0%
GAAATTCAGTATCCAAAGAA+GGG + chr4.1:83544602-83544621 None:intergenic 30.0%
TAAATATGCACCAAACACTA+GGG + chr4.1:83542627-83542646 None:intergenic 30.0%
TAAGCTCTCCAATATAGAAT+AGG + chr4.1:83542483-83542502 None:intergenic 30.0%
TTACAAAACTAATCCTGCTT+TGG - chr4.1:83542057-83542076 MS.gene052951:CDS 30.0%
TTCTATATTGGAGAGCTTAT+GGG - chr4.1:83542484-83542503 MS.gene052951:intron 30.0%
TTCTTCAAGCTTGGATTTAA+TGG + chr4.1:83543171-83543190 None:intergenic 30.0%
! AAGCCATATTGAAGAGTTTT+TGG - chr4.1:83542811-83542830 MS.gene052951:intron 30.0%
! AGTTTGAGATAAATCTGCAT+AGG + chr4.1:83543847-83543866 None:intergenic 30.0%
! GCTACTTTCCTATTCTATAT+TGG - chr4.1:83542472-83542491 MS.gene052951:intron 30.0%
! GTTTGAGATAAATCTGCATA+GGG + chr4.1:83543846-83543865 None:intergenic 30.0%
! TTTTCATATAGTCTCAAAGG+TGG - chr4.1:83542882-83542901 MS.gene052951:CDS 30.0%
! TTTTCATGATTGCTTCATTC+AGG - chr4.1:83542102-83542121 MS.gene052951:CDS 30.0%
!! AAAAATTTGGCTTTAGTCGA+AGG + chr4.1:83543968-83543987 None:intergenic 30.0%
!! AATTTTGGTAGTATCAATGG+TGG + chr4.1:83541776-83541795 None:intergenic 30.0%
!! TTGAGCATCGTGTATTTTAT+AGG - chr4.1:83543734-83543753 MS.gene052951:intron 30.0%
!! TTTTAACTGTGTTTGCATCA+GGG - chr4.1:83543047-83543066 MS.gene052951:intron 30.0%
!!! ATTTTAACTGTGTTTGCATC+AGG - chr4.1:83543046-83543065 MS.gene052951:intron 30.0%
!!! TTTTGTCATTTTCTGGTTCT+AGG - chr4.1:83542224-83542243 MS.gene052951:intron 30.0%
AAGGGGAAAAAACCAGATAT+TGG - chr4.1:83544832-83544851 MS.gene052951:CDS 35.0%
AATGGACAGATTAAGTCATC+AGG + chr4.1:83544488-83544507 None:intergenic 35.0%
AGAGCAACAAGAAATCACTA+TGG - chr4.1:83544716-83544735 MS.gene052951:CDS 35.0%
AGGGGAAAAAACCAGATATT+GGG - chr4.1:83544833-83544852 MS.gene052951:CDS 35.0%
ATGGTTCTTGTTCCAATCTT+TGG - chr4.1:83542262-83542281 MS.gene052951:intron 35.0%
ATGTACTGGAACAATGTTGA+TGG + chr4.1:83541873-83541892 None:intergenic 35.0%
CAACAAATGCACGTGTAAAA+AGG + chr4.1:83543326-83543345 None:intergenic 35.0%
CCAAACTCTGTGATTACATA+TGG - chr4.1:83543511-83543530 MS.gene052951:CDS 35.0%
CCATATGTAATCACAGAGTT+TGG + chr4.1:83543514-83543533 None:intergenic 35.0%
CCTGTATTCAAAGGATAGAA+CGG + chr4.1:83543768-83543787 None:intergenic 35.0%
CCTTTATCAGCTTACCTTAA+AGG - chr4.1:83544224-83544243 MS.gene052951:intron 35.0%
CTTTACCTTGTAATAGTCTG+CGG + chr4.1:83544782-83544801 None:intergenic 35.0%
GAAATACACACCAAACACTA+AGG + chr4.1:83542950-83542969 None:intergenic 35.0%
GCATGCCTACCTTTAAATTT+GGG + chr4.1:83544205-83544224 None:intergenic 35.0%
GGAAATAAGCTGAATACTTG+TGG - chr4.1:83542832-83542851 MS.gene052951:CDS 35.0%
GGATCATGTTAGAACAACAT+CGG + chr4.1:83543580-83543599 None:intergenic 35.0%
GGGATTTGATGAAAGAGAAA+TGG - chr4.1:83543887-83543906 MS.gene052951:intron 35.0%
GTAAATATGCACCAAACACT+AGG + chr4.1:83542628-83542647 None:intergenic 35.0%
GTATTCTTGAACCCAATATC+TGG + chr4.1:83544847-83544866 None:intergenic 35.0%
TACCACTGAAGTTATAGAGA+CGG + chr4.1:83544566-83544585 None:intergenic 35.0%
TATCTTCTTATGCTGCTACA+TGG - chr4.1:83544460-83544479 MS.gene052951:intron 35.0%
TCTATCCTTTGAATACAGGA+AGG - chr4.1:83543769-83543788 MS.gene052951:intron 35.0%
TCTTGCATCCTTCAAATCAA+GGG - chr4.1:83543866-83543885 MS.gene052951:intron 35.0%
TGCTCTTCAACTAATGAAGA+AGG + chr4.1:83544702-83544721 None:intergenic 35.0%
TTTAACTGTGTTTGCATCAG+GGG - chr4.1:83543048-83543067 MS.gene052951:intron 35.0%
! ACGGTTTTCGAAGAATTTAC+AGG + chr4.1:83544547-83544566 None:intergenic 35.0%
! ATCAAATCCCCTTGATTTGA+AGG + chr4.1:83543877-83543896 None:intergenic 35.0%
! CGGTTTTCGAAGAATTTACA+GGG + chr4.1:83544546-83544565 None:intergenic 35.0%
! CTTTTTACACGTGCATTTGT+TGG - chr4.1:83543324-83543343 MS.gene052951:intron 35.0%
! GAAACTTGGGTTGCATAATT+AGG - chr4.1:83542990-83543009 MS.gene052951:intron 35.0%
! GGTTTTCGAAGAATTTACAG+GGG + chr4.1:83544545-83544564 None:intergenic 35.0%
! GTTGTTGTTGTTGTTGTTGA+TGG + chr4.1:83541927-83541946 None:intergenic 35.0%
! TGTTTCTACGATTACGATTG+AGG - chr4.1:83544034-83544053 MS.gene052951:intron 35.0%
!! AATCCTTTGAGGCTATCATT+AGG + chr4.1:83543134-83543153 None:intergenic 35.0%
!! ATAGGTTTTGTCAAAACTCG+GGG + chr4.1:83544930-83544949 None:intergenic 35.0%
!! CATAGGTTTTGTCAAAACTC+GGG + chr4.1:83544931-83544950 None:intergenic 35.0%
!! CATTTTAGCAGTTCCAATCA+GGG + chr4.1:83544111-83544130 None:intergenic 35.0%
!! CCATAGGTTTTGTCAAAACT+CGG + chr4.1:83544932-83544951 None:intergenic 35.0%
!! CCTTTAAGGTAAGCTGATAA+AGG + chr4.1:83544227-83544246 None:intergenic 35.0%
!! CGAGTTTTGACAAAACCTAT+GGG - chr4.1:83544930-83544949 MS.gene052951:CDS 35.0%
!! TCATTTTAGCAGTTCCAATC+AGG + chr4.1:83544112-83544131 None:intergenic 35.0%
!!! CAGGATTAGTTTTGTAAAGC+CGG + chr4.1:83542054-83542073 None:intergenic 35.0%
AAAGCAAGACGAATAAGAGC+AGG + chr4.1:83542085-83542104 None:intergenic 40.0%
AACCGTCTCTATAACTTCAG+TGG - chr4.1:83544561-83544580 MS.gene052951:intron 40.0%
AAGAAATCACTATGGACTCC+GGG - chr4.1:83544724-83544743 MS.gene052951:CDS 40.0%
AAGATCAGCAGCTAATGGAA+GGG - chr4.1:83544814-83544833 MS.gene052951:CDS 40.0%
ACTCGTAGCTTACTAATACG+TGG - chr4.1:83543358-83543377 MS.gene052951:intron 40.0%
AGAGAAATGGTCACTCTCTT+AGG - chr4.1:83543900-83543919 MS.gene052951:intron 40.0%
AGCTTACTAATACGTGGAAC+TGG - chr4.1:83543364-83543383 MS.gene052951:intron 40.0%
AGGAGAGTTTCATCATTGCA+AGG + chr4.1:83544905-83544924 None:intergenic 40.0%
AGTGATATCCAAAGCATGGA+CGG + chr4.1:83544372-83544391 None:intergenic 40.0%
ATCCTTTGAATACAGGAAGG+AGG - chr4.1:83543772-83543791 MS.gene052951:intron 40.0%
CAAAACCTATGGGACAGATT+CGG - chr4.1:83544940-83544959 MS.gene052951:CDS 40.0%
CAAGAAATCACTATGGACTC+CGG - chr4.1:83544723-83544742 MS.gene052951:CDS 40.0%
CCACAATTGAAAACCCTGAT+TGG - chr4.1:83544095-83544114 MS.gene052951:intron 40.0%
CCGTTCTATCCTTTGAATAC+AGG - chr4.1:83543765-83543784 MS.gene052951:intron 40.0%
CGCAGACTATTACAAGGTAA+AGG - chr4.1:83544780-83544799 MS.gene052951:CDS 40.0%
CTATGAAGATCAGCAGCTAA+TGG - chr4.1:83544809-83544828 MS.gene052951:CDS 40.0%
CTCTTGCATCCTTCAAATCA+AGG - chr4.1:83543865-83543884 MS.gene052951:intron 40.0%
CTTGCATCCTTCAAATCAAG+GGG - chr4.1:83543867-83543886 MS.gene052951:intron 40.0%
GAAATTCGATAGAGATTCCC+CGG + chr4.1:83544745-83544764 None:intergenic 40.0%
GATAAATCTGCATAGGGTGA+AGG + chr4.1:83543840-83543859 None:intergenic 40.0%
GGAGAGTTTCATCATTGCAA+GGG + chr4.1:83544904-83544923 None:intergenic 40.0%
GGCATGCCTACCTTTAAATT+TGG + chr4.1:83544206-83544225 None:intergenic 40.0%
GGGAATCTCTATCGAATTTC+AGG - chr4.1:83544745-83544764 MS.gene052951:CDS 40.0%
TAATGAACCTGACCCTTCTT+TGG - chr4.1:83544587-83544606 MS.gene052951:intron 40.0%
TACTACCGCAGACTATTACA+AGG - chr4.1:83544774-83544793 MS.gene052951:CDS 40.0%
TCCTTTGAATACAGGAAGGA+GGG - chr4.1:83543773-83543792 MS.gene052951:intron 40.0%
TGAATATGCTGATGCTGAAG+TGG + chr4.1:83544667-83544686 None:intergenic 40.0%
TGATTACATATGGCACGTTC+TGG - chr4.1:83543521-83543540 MS.gene052951:CDS 40.0%
TTAGCTGCTGATCTTCATAG+AGG + chr4.1:83544809-83544828 None:intergenic 40.0%
TTCAACTAATGAAGAAGGCG+AGG + chr4.1:83544697-83544716 None:intergenic 40.0%
TTGCAAGGGCAAAATCTTGA+TGG + chr4.1:83544890-83544909 None:intergenic 40.0%
TTGCATAATTAGGCCTCGTT+TGG - chr4.1:83543000-83543019 MS.gene052951:intron 40.0%
TTTGGATATCACTGCACTCA+TGG - chr4.1:83544379-83544398 MS.gene052951:intron 40.0%
! AACTTTTCCCTTTTAGCACC+AGG - chr4.1:83544247-83544266 MS.gene052951:intron 40.0%
! ATTCTTGTACTTGCTGCAAG+AGG - chr4.1:83543221-83543240 MS.gene052951:intron 40.0%
! CAAAATGCCTGGTGCTAAAA+GGG + chr4.1:83544257-83544276 None:intergenic 40.0%
! CCAATCAGGGTTTTCAATTG+TGG + chr4.1:83544098-83544117 None:intergenic 40.0%
! GCATCGTGTATTTTATAGGC+CGG - chr4.1:83543738-83543757 MS.gene052951:intron 40.0%
! GTTGATGGAGTTGAATGTGT+TGG + chr4.1:83541858-83541877 None:intergenic 40.0%
! TAATACGTGGAACTGGTTCA+AGG - chr4.1:83543371-83543390 MS.gene052951:intron 40.0%
! TTTTGTCAAAACTCGGGGAT+AGG + chr4.1:83544925-83544944 None:intergenic 40.0%
!! CCGAGTTTTGACAAAACCTA+TGG - chr4.1:83544929-83544948 MS.gene052951:CDS 40.0%
!! TCTGTCCATTTTTACCTTCC+AGG - chr4.1:83544498-83544517 MS.gene052951:intron 40.0%
AGAAATCACTATGGACTCCG+GGG - chr4.1:83544725-83544744 MS.gene052951:CDS 45.0%
AGATCAGCAGCTAATGGAAG+GGG - chr4.1:83544815-83544834 MS.gene052951:CDS 45.0%
AGGACATGCTTCTTCAAGCT+TGG + chr4.1:83543180-83543199 None:intergenic 45.0%
ATAAGAGCAGGAACCAAAGC+AGG + chr4.1:83542073-83542092 None:intergenic 45.0%
CCAAACACTAAGGGTCTGTT+TGG + chr4.1:83542940-83542959 None:intergenic 45.0%
CCAAACAGACCCTTAGTGTT+TGG - chr4.1:83542937-83542956 MS.gene052951:CDS 45.0%
CCTCCTAATGATAGCCTCAA+AGG - chr4.1:83543128-83543147 MS.gene052951:intron 45.0%
CGAACAATGTGTTCTGCATG+TGG + chr4.1:83542019-83542038 None:intergenic 45.0%
CGGATGCGGGTAAAATAACA+TGG + chr4.1:83544352-83544371 None:intergenic 45.0%
CTGCATGTGGACATGAACTA+CGG + chr4.1:83542006-83542025 None:intergenic 45.0%
GAAGATCAGCAGCTAATGGA+AGG - chr4.1:83544813-83544832 MS.gene052951:CDS 45.0%
GTGCAGTGATATCCAAAGCA+TGG + chr4.1:83544376-83544395 None:intergenic 45.0%
TCAGCACAAGAAACAACTCC+AGG + chr4.1:83543200-83543219 None:intergenic 45.0%
TCAGTATCCAAAGAAGGGTC+AGG + chr4.1:83544597-83544616 None:intergenic 45.0%
TCATAGAGGTCCAAAATGCC+TGG + chr4.1:83544268-83544287 None:intergenic 45.0%
TCCCTCCTTCCTGTATTCAA+AGG + chr4.1:83543777-83543796 None:intergenic 45.0%
TGCAAGAGGTTCTGTTGTTC+TGG - chr4.1:83543235-83543254 MS.gene052951:intron 45.0%
TTGAATACAGGAAGGAGGGA+TGG - chr4.1:83543777-83543796 MS.gene052951:intron 45.0%
TTGTTCGTTCTACGCTTCAC+CGG - chr4.1:83542032-83542051 MS.gene052951:CDS 45.0%
! AAGCTTGAAGAAGCATGTCC+TGG - chr4.1:83543179-83543198 MS.gene052951:intron 45.0%
! CCAAAATGCCTGGTGCTAAA+AGG + chr4.1:83544258-83544277 None:intergenic 45.0%
! CCTTTTAGCACCAGGCATTT+TGG - chr4.1:83544255-83544274 MS.gene052951:intron 45.0%
! TCGTGTATTTTATAGGCCGG+TGG - chr4.1:83543741-83543760 MS.gene052951:intron 45.0%
!! CCTTTGAGGCTATCATTAGG+AGG + chr4.1:83543131-83543150 None:intergenic 45.0%
!!! AAACATTTATTTTAAAAATT+TGG + chr4.1:83543981-83544000 None:intergenic 5.0%
ACCAAACACTAGGGTCTGCT+TGG + chr4.1:83542618-83542637 None:intergenic 50.0%
AGGGGATTACACCAATGCTG+TGG + chr4.1:83544527-83544546 None:intergenic 50.0%
ATCCAAAGCATGGACGGATG+CGG + chr4.1:83544366-83544385 None:intergenic 50.0%
CAAAGGATAGAACGGACCAC+CGG + chr4.1:83543760-83543779 None:intergenic 50.0%
GGGCACCTGGAAGGTAAAAA+TGG + chr4.1:83544506-83544525 None:intergenic 50.0%
GGGGATTACACCAATGCTGT+GGG + chr4.1:83544526-83544545 None:intergenic 50.0%
TCCAAGCAGACCCTAGTGTT+TGG - chr4.1:83542614-83542633 MS.gene052951:intron 50.0%
TCCAAAGCATGGACGGATGC+GGG + chr4.1:83544365-83544384 None:intergenic 55.0%
ACACCAATGCTGTGGGCACC+TGG + chr4.1:83544519-83544538 None:intergenic 60.0%
ACCCGCATCCGTCCATGCTT+TGG - chr4.1:83544361-83544380 MS.gene052951:intron 60.0%
CAATGCTGTGGGCACCTGGA+AGG + chr4.1:83544515-83544534 None:intergenic 60.0%
CTGCGCCGAATCTGTCCCAT+AGG + chr4.1:83544948-83544967 None:intergenic 60.0%
CTTCCAGGTGCCCACAGCAT+TGG - chr4.1:83544513-83544532 MS.gene052951:intron 60.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 83541767 83544986 83541767 ID=MS.gene052951
chr4.1 mRNA 83541767 83544986 83541767 ID=MS.gene052951.t1;Parent=MS.gene052951
chr4.1 exon 83544630 83544986 83544630 ID=MS.gene052951.t1.exon1;Parent=MS.gene052951.t1
chr4.1 CDS 83544630 83544986 83544630 ID=cds.MS.gene052951.t1;Parent=MS.gene052951.t1
chr4.1 exon 83543497 83543685 83543497 ID=MS.gene052951.t1.exon2;Parent=MS.gene052951.t1
chr4.1 CDS 83543497 83543685 83543497 ID=cds.MS.gene052951.t1;Parent=MS.gene052951.t1
chr4.1 exon 83542832 83542997 83542832 ID=MS.gene052951.t1.exon3;Parent=MS.gene052951.t1
chr4.1 CDS 83542832 83542997 83542832 ID=cds.MS.gene052951.t1;Parent=MS.gene052951.t1
chr4.1 exon 83541767 83542233 83541767 ID=MS.gene052951.t1.exon4;Parent=MS.gene052951.t1
chr4.1 CDS 83541767 83542233 83541767 ID=cds.MS.gene052951.t1;Parent=MS.gene052951.t1
Gene Sequence

>MS.gene052951

ATGGCACCACCATTGATACTACCAAAATTAATTCTTCTGATTCTTGTGTTATGTCTTTTATTTCAACACAAAAATCACAACAAGAACACCAACACATTCAACTCCATCAACATTGTTCCAGTACATTCTTTTTCAAGTTTCCCAAATTCTATATCTTCCATCAACAACAACAACAACAACAACCATGTATCAGAATCATCTTCTTCTTCTAACTCTCTTCTTGAATATGATTTCTACCGTAGTTCATGTCCACATGCAGAACACATTGTTCGTTCTACGCTTCACCGGCTTTACAAAACTAATCCTGCTTTGGTTCCTGCTCTTATTCGTCTTGCTTTTCATGATTGCTTCATTCAGGTCCCTTTTTCTTTCTTCTTTCTTTTTATTTACAACCATGTATTTTCTTGTTTATTATTTCAAAACTAGAAGAAAAAAATGTTTTATTTATTTTTATTATTTTTGTCATTTTCTGGTTCTAGGTGTATTTTCTTATTCATGGTTCTTGTTCCAATCTTTGGTCAATAAATTTCTAAGAACATACGCTTGACTAAATGTGATTGTATGAAAAGTTCTGATTTTTGAACTTTTTCATTGAAAATTCATTTTACTTTCAAGTCATAGTTTGACTGAAGTCAGAGAAATTAGAAATTGACTTATTTTGATAAGTTGATTTTTGAAGGATTATATGTCATGGTTAAGCTATTAGCTACTTTCCTATTCTATATTGGAGAGCTTATGGGAATAAGCTGAAAAGAACATACGGAGATGTCATAAGCTGTTTCTATAAGTTCTCTCGTATAATCTCGAAAGTGCTTGTGCTTATACAAGATAAACTCAAATAAATCAATCCAAGCAGACCCTAGTGTTTGGTGCATATTTACGATGTTTACCTTTTATAGATTTAGGCTATGTTTGGATAAATAGCTTAATTAAGAATGTATGATATAAGCACTTATCATATAAGTACTCATTTATAAGTTATTTCTAAAATGAAAAATCAAATAAATTCAAATTGTTTTCTTATAAGGTATAAGCTGCTTTCATAAGCCATATTGAAGAGTTTTTGGAAATAAGCTGAATACTTGTGGACATGTCATAAGTTGTTTCCATAGATTTTTTCATATAGTCTCAAAGGTGGTTATGCAAGTAGATAAACTCAAATAAATCAATCCAAACAGACCCTTAGTGTTTGGTGTGTATTTCTGATGTTTACCTTTTTCTATGAAACTTGGGTTGCATAATTAGGCCTCGTTTGGTTTTTTTAAACTGCATTGTGTTGATTTTAACTGTGTTTGCATCAGGGGTGTGATGCTTCTGTTTTGTTAGATAATGATGAATACATTGATTCAGAGAAAGATTCACCTCCTAATGATAGCCTCAAAGGATTTGATGTAATAGAGACCATTAAATCCAAGCTTGAAGAAGCATGTCCTGGAGTTGTTTCTTGTGCTGATATTCTTGTACTTGCTGCAAGAGGTTCTGTTGTTCTGGTAACATTATTTATTTCCCTATATATTTCGTCATCGTTGTATGTGTATATGTTTAAGAGATTAAAACCTTTTTACACGTGCATTTGTTGGATATGACTCGTACTCGTAGCTTACTAATACGTGGAACTGGTTCAAGGTAATCTTGTATATTGAAGTGTAGTATTTAAAAAACAAATTGAACTATGTAAACTCTAAGCTTGAATAATAGTAAGGTATTGTGGTCGTTCTGTACTCGAAGACATAGACACAATTGACCAAACTCTGTGATTACATATGGCACGTTCTGGTTTTGCTTTTTTCATAACTTTTTTACTTTTGAGCCGATGTTGTTCTAACATGATCCGATCAAATTAGAGCATAATGTCATTTTATTATATTTGTTTCTTAATATTTCCACAAATATCTAAATGGTGATATGTGATTAGATGCATACAAATTAAATCTTATGTTTAATTTTTAATAGACTTTGCAACATAATTGAGCATCGTGTATTTTATAGGCCGGTGGTCCGTTCTATCCTTTGAATACAGGAAGGAGGGATGGTTCTAACTCTTTTGCTGACATAGCAACAGATGAGCTTCCTTCACCCTATGCAGATTTATCTCAAACTCTTGCATCCTTCAAATCAAGGGGATTTGATGAAAGAGAAATGGTCACTCTCTTAGGTTAATTTCTAATTATGCTTTATGTCTTATTCTTTACATACTTCCTTCGACTAAAGCCAAATTTTTAAAATAAATGTTTGTGATCTGGATCACAATATCAAAGTTTCTTTTATGTTTCTACGATTACGATTGAGGCTGCACTGATCCGAAGTATTCAAAAAATTGCGACACAACCACAATTGAAAACCCTGATTGGAACTGCTAAAATGAAATTATATATTTCAGCTTAGACAAGGTTCCTTTTTAAAGAGCTTATATATAATGTATATTGTGATCTTAACCCAAATTTAAAGGTAGGCATGCCTTTATCAGCTTACCTTAAAGGAACTTTTCCCTTTTAGCACCAGGCATTTTGGACCTCTATGAAACTTTTTGCAGTTAAATAATAGAACTCAGAACATAGATAGGATAAATTTTTTGTTGAGATCCATGTTATTTTACCCGCATCCGTCCATGCTTTGGATATCACTGCACTCATGGCCGTAATTCTTTGTTCTTTGATCATTTTAGAGTCATTTTTTGCACATGACTTCTTAGCTATCTTCTTATGCTGCTACATGGTTCCTGATGACTTAATCTGTCCATTTTTACCTTCCAGGTGCCCACAGCATTGGTGTAATCCCCTGTAAATTCTTCGAAAACCGTCTCTATAACTTCAGTGGTACTAATGAACCTGACCCTTCTTTGGATACTGAATTTCTAAATGTACTAAGATCAAGATGCAATGAAACTGATGCATTATCCACTTCAGCATCAGCATATTCATCACATGCCTCGCCTTCTTCATTAGTTGAAGAGCAACAAGAAATCACTATGGACTCCGGGGAATCTCTATCGAATTTCAGGATGTTATACTACCGCAGACTATTACAAGGTAAAGGAATCCTCTATGAAGATCAGCAGCTAATGGAAGGGGAAAAAACCAGATATTGGGTTCAAGAATACGCATCTAATCGTACTTTGTTCCATCAAGATTTTGCCCTTGCAATGATGAAACTCTCCTATCCCCGAGTTTTGACAAAACCTATGGGACAGATTCGGCGCAGTTGTTCAAAAGTTGAATGA
Protein sequence

>MS.gene052951.t1

MAPPLILPKLILLILVLCLLFQHKNHNKNTNTFNSINIVPVHSFSSFPNSISSINNNNNNNHVSESSSSSNSLLEYDFYRSSCPHAEHIVRSTLHRLYKTNPALVPALIRLAFHDCFIQGCDASVLLDNDEYIDSEKDSPPNDSLKGFDVIETIKSKLEEACPGVVSCADILVLAARGSVVLAGGPFYPLNTGRRDGSNSFADIATDELPSPYADLSQTLASFKSRGFDEREMVTLLGAHSIGVIPCKFFENRLYNFSGTNEPDPSLDTEFLNVLRSRCNETDALSTSASAYSSHASPSSLVEEQQEITMDSGESLSNFRMLYYRRLLQGKGILYEDQQLMEGEKTRYWVQEYASNRTLFHQDFALAMMKLSYPRVLTKPMGQIRRSCSKVE