Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60708.t1 | GAU13317.1 | 84.1 | 364 | 38 | 2 | 1 | 351 | 1 | 357 | 3.00E-165 | 591.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60708.t1 | Q96520 | 56.4 | 337 | 124 | 4 | 28 | 351 | 31 | 357 | 2.5e-104 | 380.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60708.t1 | A0A2Z6M3D7 | 84.1 | 364 | 38 | 2 | 1 | 351 | 1 | 357 | 2.2e-165 | 591.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60708.t1 | MTR_6g043240 | 52.381 | 357 | 141 | 6 | 8 | 348 | 9 | 352 | 2.08e-126 | 367 |
MS.gene60708.t1 | MTR_6g043280 | 48.105 | 343 | 154 | 6 | 1 | 330 | 1 | 332 | 2.75e-108 | 320 |
MS.gene60708.t1 | MTR_6g043460 | 44.540 | 348 | 164 | 6 | 1 | 334 | 1 | 333 | 1.64e-94 | 285 |
MS.gene60708.t1 | MTR_2g029750 | 41.337 | 329 | 160 | 9 | 41 | 346 | 29 | 347 | 1.78e-72 | 229 |
MS.gene60708.t1 | MTR_0155s0040 | 39.333 | 300 | 155 | 6 | 40 | 326 | 26 | 311 | 9.73e-70 | 221 |
MS.gene60708.t1 | MTR_2g029860 | 38.286 | 350 | 175 | 9 | 19 | 346 | 16 | 346 | 2.27e-69 | 221 |
MS.gene60708.t1 | MTR_5g021060 | 41.391 | 302 | 148 | 7 | 45 | 326 | 34 | 326 | 3.42e-69 | 220 |
MS.gene60708.t1 | MTR_7g093370 | 38.988 | 336 | 165 | 9 | 13 | 326 | 50 | 367 | 6.92e-68 | 218 |
MS.gene60708.t1 | MTR_2g029815 | 39.752 | 322 | 162 | 8 | 34 | 333 | 22 | 333 | 9.60e-68 | 217 |
MS.gene60708.t1 | MTR_2g029740 | 39.752 | 322 | 162 | 8 | 45 | 344 | 33 | 344 | 1.91e-67 | 216 |
MS.gene60708.t1 | MTR_3g092990 | 42.628 | 312 | 146 | 8 | 41 | 330 | 26 | 326 | 4.00e-67 | 214 |
MS.gene60708.t1 | MTR_2g028980 | 38.682 | 349 | 169 | 9 | 12 | 333 | 3 | 333 | 5.58e-67 | 215 |
MS.gene60708.t1 | MTR_8g076820 | 39.542 | 306 | 156 | 7 | 45 | 330 | 34 | 330 | 3.49e-66 | 212 |
MS.gene60708.t1 | MTR_2g029800 | 39.048 | 315 | 160 | 8 | 41 | 333 | 29 | 333 | 5.03e-66 | 212 |
MS.gene60708.t1 | MTR_2g029830 | 38.788 | 330 | 170 | 8 | 41 | 348 | 28 | 347 | 1.35e-65 | 211 |
MS.gene60708.t1 | MTR_2g029560 | 38.769 | 325 | 167 | 8 | 41 | 343 | 24 | 338 | 1.92e-65 | 211 |
MS.gene60708.t1 | MTR_4g029170 | 36.061 | 330 | 183 | 8 | 17 | 330 | 4 | 321 | 9.43e-65 | 208 |
MS.gene60708.t1 | MTR_2g040000 | 38.286 | 350 | 170 | 12 | 5 | 330 | 4 | 331 | 1.25e-64 | 208 |
MS.gene60708.t1 | MTR_1g077000 | 36.455 | 299 | 163 | 6 | 41 | 326 | 39 | 323 | 2.53e-64 | 207 |
MS.gene60708.t1 | MTR_4g125940 | 38.109 | 349 | 170 | 10 | 5 | 330 | 4 | 329 | 2.59e-64 | 207 |
MS.gene60708.t1 | MTR_2g029820 | 39.365 | 315 | 159 | 8 | 41 | 333 | 29 | 333 | 4.62e-64 | 207 |
MS.gene60708.t1 | MTR_1g054205 | 37.217 | 309 | 161 | 8 | 41 | 326 | 24 | 322 | 1.48e-63 | 205 |
MS.gene60708.t1 | MTR_2g084110 | 37.667 | 300 | 162 | 6 | 45 | 330 | 29 | 317 | 1.70e-63 | 205 |
MS.gene60708.t1 | MTR_1g086320 | 41.083 | 314 | 151 | 9 | 41 | 330 | 30 | 333 | 2.52e-63 | 205 |
MS.gene60708.t1 | MTR_2g029730 | 38.957 | 326 | 169 | 7 | 41 | 345 | 25 | 341 | 3.30e-63 | 205 |
MS.gene60708.t1 | MTR_4g083710 | 38.636 | 308 | 161 | 7 | 41 | 330 | 27 | 324 | 3.76e-63 | 204 |
MS.gene60708.t1 | MTR_3g466200 | 37.846 | 325 | 171 | 5 | 16 | 326 | 9 | 316 | 7.67e-63 | 203 |
MS.gene60708.t1 | MTR_2g084080 | 37.000 | 300 | 164 | 6 | 45 | 330 | 29 | 317 | 1.41e-62 | 202 |
MS.gene60708.t1 | MTR_2g088770 | 39.744 | 312 | 154 | 9 | 41 | 330 | 26 | 325 | 1.73e-62 | 202 |
MS.gene60708.t1 | MTR_5g017850 | 38.291 | 316 | 165 | 7 | 35 | 330 | 21 | 326 | 2.93e-62 | 202 |
MS.gene60708.t1 | MTR_8g075100 | 39.355 | 310 | 152 | 8 | 41 | 330 | 26 | 319 | 4.34e-62 | 201 |
MS.gene60708.t1 | MTR_5g074970 | 38.816 | 304 | 157 | 6 | 41 | 326 | 30 | 322 | 4.40e-62 | 201 |
MS.gene60708.t1 | MTR_1g022970 | 39.935 | 308 | 155 | 7 | 40 | 326 | 45 | 343 | 5.36e-62 | 202 |
MS.gene60708.t1 | MTR_5g017860 | 39.117 | 317 | 161 | 7 | 35 | 330 | 21 | 326 | 6.69e-62 | 201 |
MS.gene60708.t1 | MTR_3g072190 | 36.061 | 330 | 182 | 7 | 9 | 326 | 2 | 314 | 2.70e-61 | 199 |
MS.gene60708.t1 | MTR_7g072510 | 37.705 | 305 | 163 | 7 | 41 | 330 | 20 | 312 | 3.04e-61 | 199 |
MS.gene60708.t1 | MTR_3g092990 | 41.346 | 312 | 139 | 8 | 41 | 330 | 26 | 315 | 3.71e-61 | 199 |
MS.gene60708.t1 | MTR_2g029850 | 38.720 | 328 | 168 | 9 | 41 | 346 | 29 | 345 | 4.55e-61 | 199 |
MS.gene60708.t1 | MTR_5g014100 | 39.172 | 314 | 151 | 11 | 45 | 330 | 30 | 331 | 8.83e-61 | 198 |
MS.gene60708.t1 | MTR_7g086870 | 36.424 | 302 | 168 | 4 | 41 | 330 | 22 | 311 | 1.16e-60 | 197 |
MS.gene60708.t1 | MTR_7g029030 | 39.542 | 306 | 159 | 8 | 41 | 330 | 25 | 320 | 1.64e-60 | 197 |
MS.gene60708.t1 | MTR_1g086490 | 40.187 | 321 | 151 | 9 | 41 | 330 | 30 | 340 | 1.94e-60 | 197 |
MS.gene60708.t1 | MTR_2g084020 | 37.542 | 301 | 162 | 7 | 45 | 330 | 29 | 318 | 2.01e-60 | 197 |
MS.gene60708.t1 | MTR_7g086820 | 38.019 | 313 | 165 | 5 | 35 | 331 | 14 | 313 | 2.71e-60 | 196 |
MS.gene60708.t1 | MTR_7g072480 | 38.037 | 326 | 166 | 8 | 16 | 326 | 8 | 312 | 4.20e-60 | 196 |
MS.gene60708.t1 | MTR_3g094650 | 37.086 | 302 | 163 | 6 | 41 | 326 | 28 | 318 | 5.58e-60 | 196 |
MS.gene60708.t1 | MTR_1g101830 | 37.048 | 332 | 166 | 9 | 19 | 330 | 14 | 322 | 6.35e-60 | 196 |
MS.gene60708.t1 | MTR_4g095450 | 37.171 | 304 | 167 | 5 | 41 | 328 | 27 | 322 | 8.18e-60 | 195 |
MS.gene60708.t1 | MTR_5g022870 | 37.013 | 308 | 158 | 8 | 39 | 326 | 21 | 312 | 1.67e-59 | 194 |
MS.gene60708.t1 | MTR_4g030890 | 39.344 | 305 | 154 | 7 | 45 | 330 | 104 | 396 | 2.11e-59 | 197 |
MS.gene60708.t1 | MTR_1g038680 | 38.511 | 309 | 158 | 9 | 45 | 330 | 33 | 332 | 4.04e-59 | 194 |
MS.gene60708.t1 | MTR_6g027440 | 35.577 | 312 | 173 | 5 | 35 | 330 | 15 | 314 | 6.11e-59 | 193 |
MS.gene60708.t1 | MTR_2g084010 | 37.209 | 301 | 163 | 7 | 45 | 330 | 29 | 318 | 7.28e-59 | 193 |
MS.gene60708.t1 | MTR_4g046713 | 37.908 | 306 | 160 | 7 | 45 | 330 | 31 | 326 | 1.04e-58 | 192 |
MS.gene60708.t1 | MTR_2g008710 | 38.413 | 315 | 157 | 8 | 39 | 330 | 25 | 325 | 1.31e-58 | 192 |
MS.gene60708.t1 | MTR_4g029180 | 35.880 | 301 | 168 | 6 | 45 | 330 | 31 | 321 | 1.47e-58 | 192 |
MS.gene60708.t1 | MTR_7g107520 | 37.389 | 337 | 171 | 9 | 13 | 330 | 5 | 320 | 1.53e-58 | 192 |
MS.gene60708.t1 | MTR_5g049280 | 33.333 | 345 | 191 | 10 | 11 | 330 | 7 | 337 | 1.58e-58 | 192 |
MS.gene60708.t1 | MTR_4g074995 | 37.662 | 308 | 151 | 8 | 41 | 330 | 24 | 308 | 1.66e-58 | 191 |
MS.gene60708.t1 | MTR_5g083860 | 36.667 | 300 | 167 | 5 | 41 | 326 | 31 | 321 | 2.66e-58 | 191 |
MS.gene60708.t1 | MTR_1g098320 | 90.099 | 101 | 6 | 1 | 251 | 351 | 45 | 141 | 2.84e-58 | 185 |
MS.gene60708.t1 | MTR_2g029910 | 36.728 | 324 | 172 | 8 | 45 | 346 | 34 | 346 | 4.24e-58 | 192 |
MS.gene60708.t1 | MTR_4g074990 | 35.735 | 347 | 164 | 9 | 1 | 330 | 1 | 305 | 4.27e-58 | 190 |
MS.gene60708.t1 | MTR_2g084090 | 35.880 | 301 | 167 | 6 | 45 | 330 | 29 | 318 | 5.06e-58 | 191 |
MS.gene60708.t1 | MTR_4g029200 | 38.782 | 312 | 164 | 7 | 34 | 330 | 39 | 338 | 5.69e-58 | 191 |
MS.gene60708.t1 | MTR_5g074760 | 36.825 | 315 | 170 | 8 | 36 | 332 | 20 | 323 | 2.03e-57 | 189 |
MS.gene60708.t1 | MTR_2g084000 | 34.226 | 336 | 183 | 9 | 10 | 330 | 7 | 319 | 3.73e-57 | 188 |
MS.gene60708.t1 | MTR_2g437770 | 36.570 | 309 | 160 | 9 | 41 | 330 | 50 | 341 | 1.12e-56 | 188 |
MS.gene60708.t1 | MTR_5g016010 | 35.873 | 315 | 171 | 7 | 36 | 328 | 22 | 327 | 2.02e-56 | 187 |
MS.gene60708.t1 | MTR_4g031140 | 37.049 | 305 | 161 | 7 | 45 | 330 | 32 | 324 | 2.12e-56 | 187 |
MS.gene60708.t1 | MTR_1g025980 | 35.897 | 312 | 165 | 9 | 37 | 328 | 20 | 316 | 2.57e-56 | 186 |
MS.gene60708.t1 | MTR_2g029830 | 39.711 | 277 | 142 | 7 | 94 | 348 | 6 | 279 | 2.77e-56 | 185 |
MS.gene60708.t1 | MTR_4g114210 | 38.462 | 312 | 152 | 10 | 41 | 327 | 21 | 317 | 1.50e-55 | 184 |
MS.gene60708.t1 | MTR_4g125940 | 39.789 | 284 | 137 | 8 | 71 | 331 | 3 | 275 | 4.80e-55 | 181 |
MS.gene60708.t1 | MTR_4g132490 | 36.306 | 314 | 169 | 8 | 38 | 330 | 24 | 327 | 5.74e-55 | 183 |
MS.gene60708.t1 | MTR_3g094670 | 36.424 | 302 | 165 | 6 | 41 | 326 | 28 | 318 | 1.35e-54 | 182 |
MS.gene60708.t1 | MTR_4g122640 | 34.018 | 341 | 196 | 7 | 9 | 330 | 6 | 336 | 1.67e-54 | 182 |
MS.gene60708.t1 | MTR_4g127670 | 36.013 | 311 | 167 | 8 | 41 | 330 | 24 | 323 | 1.94e-54 | 181 |
MS.gene60708.t1 | MTR_5g074740 | 35.987 | 314 | 172 | 8 | 36 | 331 | 20 | 322 | 6.82e-54 | 180 |
MS.gene60708.t1 | MTR_1g090760 | 34.615 | 312 | 175 | 6 | 41 | 331 | 28 | 331 | 7.36e-53 | 177 |
MS.gene60708.t1 | MTR_5g074860 | 36.393 | 305 | 163 | 10 | 41 | 326 | 29 | 321 | 1.13e-52 | 177 |
MS.gene60708.t1 | MTR_4g087965 | 34.985 | 343 | 191 | 8 | 11 | 329 | 11 | 345 | 3.16e-52 | 176 |
MS.gene60708.t1 | MTR_7g026990 | 35.667 | 300 | 167 | 6 | 45 | 330 | 35 | 322 | 3.20e-52 | 176 |
MS.gene60708.t1 | MTR_5g074710 | 34.921 | 315 | 174 | 9 | 36 | 331 | 20 | 322 | 5.11e-52 | 175 |
MS.gene60708.t1 | MTR_3g466180 | 37.209 | 301 | 162 | 7 | 41 | 326 | 31 | 319 | 1.03e-51 | 174 |
MS.gene60708.t1 | MTR_4g074980 | 35.974 | 303 | 148 | 8 | 41 | 330 | 25 | 294 | 5.24e-51 | 172 |
MS.gene60708.t1 | MTR_4g029190 | 38.591 | 298 | 154 | 8 | 50 | 330 | 55 | 340 | 7.58e-51 | 172 |
MS.gene60708.t1 | MTR_1g009750 | 34.295 | 312 | 173 | 8 | 41 | 330 | 27 | 328 | 8.78e-51 | 172 |
MS.gene60708.t1 | MTR_4g133800 | 34.426 | 305 | 165 | 8 | 46 | 331 | 46 | 334 | 8.86e-51 | 172 |
MS.gene60708.t1 | MTR_3g094630 | 36.093 | 302 | 166 | 6 | 41 | 326 | 28 | 318 | 1.15e-50 | 172 |
MS.gene60708.t1 | MTR_3g072190 | 36.437 | 247 | 143 | 4 | 92 | 326 | 3 | 247 | 2.65e-50 | 169 |
MS.gene60708.t1 | MTR_1g066710 | 32.797 | 311 | 178 | 6 | 41 | 332 | 27 | 325 | 6.74e-50 | 170 |
MS.gene60708.t1 | MTR_8g062780 | 33.123 | 317 | 181 | 7 | 36 | 330 | 17 | 324 | 9.94e-49 | 167 |
MS.gene60708.t1 | MTR_3g467600 | 34.412 | 340 | 180 | 13 | 10 | 330 | 9 | 324 | 1.18e-48 | 166 |
MS.gene60708.t1 | MTR_1g066380 | 31.410 | 312 | 187 | 5 | 38 | 332 | 24 | 325 | 3.88e-48 | 165 |
MS.gene60708.t1 | MTR_4g132110 | 31.613 | 310 | 185 | 5 | 40 | 332 | 31 | 330 | 1.78e-47 | 164 |
MS.gene60708.t1 | MTR_1g115900 | 35.390 | 308 | 168 | 9 | 41 | 330 | 27 | 321 | 2.18e-47 | 163 |
MS.gene60708.t1 | MTR_4g074980 | 39.331 | 239 | 118 | 6 | 41 | 262 | 25 | 253 | 3.70e-47 | 160 |
MS.gene60708.t1 | MTR_1g066640 | 31.392 | 309 | 185 | 5 | 41 | 332 | 27 | 325 | 6.93e-47 | 162 |
MS.gene60708.t1 | MTR_2g099175 | 33.807 | 352 | 188 | 11 | 7 | 331 | 3 | 336 | 6.02e-46 | 160 |
MS.gene60708.t1 | MTR_2g067440 | 31.250 | 336 | 171 | 9 | 41 | 327 | 60 | 384 | 9.58e-46 | 160 |
MS.gene60708.t1 | MTR_4g132110 | 31.111 | 315 | 185 | 6 | 40 | 332 | 31 | 335 | 2.38e-45 | 158 |
MS.gene60708.t1 | MTR_0286s0010 | 33.224 | 304 | 178 | 5 | 41 | 326 | 34 | 330 | 1.74e-44 | 156 |
MS.gene60708.t1 | MTR_6g008075 | 33.224 | 304 | 178 | 5 | 41 | 326 | 34 | 330 | 1.74e-44 | 156 |
MS.gene60708.t1 | MTR_5g074860 | 34.247 | 292 | 148 | 9 | 41 | 326 | 29 | 282 | 4.86e-44 | 153 |
MS.gene60708.t1 | MTR_2g008730 | 33.016 | 315 | 150 | 7 | 39 | 330 | 25 | 301 | 1.84e-42 | 149 |
MS.gene60708.t1 | MTR_1g066680 | 30.645 | 310 | 185 | 7 | 41 | 332 | 27 | 324 | 4.08e-42 | 149 |
MS.gene60708.t1 | MTR_2g008160 | 31.949 | 313 | 177 | 9 | 41 | 330 | 24 | 323 | 1.11e-41 | 148 |
MS.gene60708.t1 | MTR_2g077990 | 30.473 | 338 | 174 | 9 | 41 | 327 | 76 | 403 | 5.16e-41 | 148 |
MS.gene60708.t1 | MTR_1g066380 | 32.946 | 258 | 153 | 4 | 92 | 332 | 3 | 257 | 9.86e-41 | 144 |
MS.gene60708.t1 | MTR_2g078610 | 30.473 | 338 | 174 | 9 | 41 | 327 | 76 | 403 | 1.11e-40 | 147 |
MS.gene60708.t1 | MTR_1g009750 | 31.613 | 310 | 167 | 9 | 41 | 330 | 27 | 311 | 3.44e-40 | 144 |
MS.gene60708.t1 | MTR_2g008160 | 32.095 | 296 | 164 | 8 | 41 | 330 | 24 | 288 | 7.22e-40 | 142 |
MS.gene60708.t1 | MTR_3g105790 | 31.746 | 315 | 181 | 6 | 37 | 330 | 21 | 322 | 1.03e-38 | 140 |
MS.gene60708.t1 | MTR_2g078280 | 30.275 | 327 | 167 | 9 | 41 | 316 | 76 | 392 | 2.29e-36 | 135 |
MS.gene60708.t1 | MTR_2g067450 | 31.068 | 309 | 179 | 9 | 41 | 327 | 11 | 307 | 7.12e-36 | 132 |
MS.gene60708.t1 | MTR_2g029880 | 40.291 | 206 | 91 | 7 | 161 | 346 | 9 | 202 | 5.10e-35 | 127 |
MS.gene60708.t1 | MTR_5g033470 | 30.671 | 313 | 186 | 7 | 41 | 330 | 73 | 377 | 6.32e-34 | 129 |
MS.gene60708.t1 | MTR_5g074700 | 34.956 | 226 | 116 | 7 | 122 | 331 | 5 | 215 | 8.05e-33 | 122 |
MS.gene60708.t1 | MTR_2g008160 | 36.000 | 175 | 99 | 4 | 41 | 215 | 24 | 185 | 6.22e-31 | 116 |
MS.gene60708.t1 | MTR_5g058120 | 41.935 | 155 | 81 | 2 | 181 | 326 | 1 | 155 | 1.10e-30 | 117 |
MS.gene60708.t1 | MTR_7g072490 | 34.483 | 232 | 104 | 5 | 94 | 323 | 2 | 187 | 1.61e-30 | 115 |
MS.gene60708.t1 | MTR_0147s0010 | 28.049 | 328 | 170 | 9 | 41 | 327 | 77 | 379 | 2.05e-30 | 119 |
MS.gene60708.t1 | MTR_3g105790 | 33.333 | 252 | 141 | 6 | 100 | 330 | 1 | 246 | 1.73e-28 | 111 |
MS.gene60708.t1 | MTR_3g072210 | 33.702 | 181 | 105 | 5 | 160 | 326 | 55 | 234 | 1.58e-25 | 103 |
MS.gene60708.t1 | MTR_7g086790 | 34.392 | 189 | 115 | 5 | 86 | 272 | 8 | 189 | 6.69e-24 | 97.8 |
MS.gene60708.t1 | MTR_3g072260 | 36.486 | 148 | 78 | 4 | 9 | 156 | 2 | 133 | 3.85e-20 | 85.9 |
MS.gene60708.t1 | MTR_7g107500 | 52.703 | 74 | 34 | 1 | 257 | 330 | 25 | 97 | 1.07e-16 | 75.1 |
MS.gene60708.t1 | MTR_3g107060 | 25.723 | 311 | 162 | 11 | 10 | 309 | 58 | 310 | 2.22e-15 | 76.3 |
MS.gene60708.t1 | MTR_1g089005 | 35.000 | 120 | 75 | 2 | 41 | 160 | 15 | 131 | 4.90e-15 | 72.0 |
MS.gene60708.t1 | MTR_4g114220 | 42.857 | 105 | 40 | 4 | 57 | 159 | 17 | 103 | 2.27e-14 | 70.1 |
MS.gene60708.t1 | MTR_3g462850 | 33.043 | 115 | 70 | 4 | 222 | 330 | 36 | 149 | 1.04e-13 | 68.2 |
MS.gene60708.t1 | MTR_4g031040 | 38.679 | 106 | 62 | 2 | 159 | 262 | 25 | 129 | 1.20e-12 | 65.1 |
MS.gene60708.t1 | MTR_6g048160 | 46.479 | 71 | 33 | 2 | 88 | 158 | 23 | 88 | 2.01e-12 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60708.t1 | AT1G71695 | 54.469 | 358 | 136 | 5 | 11 | 351 | 10 | 357 | 1.03e-139 | 400 |
MS.gene60708.t1 | AT2G18150 | 39.073 | 302 | 155 | 7 | 45 | 326 | 40 | 332 | 4.73e-68 | 217 |
MS.gene60708.t1 | AT5G06730 | 37.430 | 358 | 182 | 10 | 1 | 335 | 1 | 339 | 8.35e-68 | 217 |
MS.gene60708.t1 | AT4G08780 | 39.514 | 329 | 165 | 9 | 41 | 346 | 24 | 341 | 2.46e-67 | 216 |
MS.gene60708.t1 | AT2G18140 | 39.404 | 302 | 154 | 7 | 45 | 326 | 39 | 331 | 4.65e-67 | 214 |
MS.gene60708.t1 | AT4G36430 | 38.079 | 302 | 158 | 7 | 45 | 326 | 34 | 326 | 1.21e-66 | 213 |
MS.gene60708.t1 | AT3G32980 | 39.535 | 344 | 161 | 11 | 24 | 342 | 23 | 344 | 1.77e-66 | 214 |
MS.gene60708.t1 | AT4G08770 | 38.551 | 345 | 171 | 10 | 25 | 346 | 15 | 341 | 3.98e-66 | 213 |
MS.gene60708.t1 | AT1G49570 | 39.744 | 312 | 157 | 7 | 37 | 326 | 44 | 346 | 1.03e-65 | 211 |
MS.gene60708.t1 | AT5G66390 | 39.073 | 302 | 155 | 7 | 45 | 326 | 37 | 329 | 1.86e-65 | 210 |
MS.gene60708.t1 | AT3G49120 | 38.438 | 333 | 164 | 9 | 24 | 333 | 24 | 338 | 4.46e-65 | 210 |
MS.gene60708.t1 | AT5G14130 | 37.879 | 330 | 169 | 6 | 19 | 330 | 19 | 330 | 9.66e-65 | 208 |
MS.gene60708.t1 | AT5G14130 | 37.879 | 330 | 169 | 6 | 19 | 330 | 60 | 371 | 2.53e-64 | 209 |
MS.gene60708.t1 | AT4G33420 | 37.231 | 325 | 167 | 6 | 14 | 326 | 22 | 321 | 9.30e-64 | 206 |
MS.gene60708.t1 | AT4G33420 | 37.231 | 325 | 167 | 6 | 14 | 326 | 69 | 368 | 3.19e-63 | 206 |
MS.gene60708.t1 | AT5G06720 | 36.808 | 307 | 164 | 7 | 41 | 326 | 32 | 329 | 3.21e-63 | 204 |
MS.gene60708.t1 | AT3G21770 | 39.877 | 326 | 153 | 10 | 25 | 328 | 22 | 326 | 5.56e-63 | 204 |
MS.gene60708.t1 | AT3G50990 | 37.864 | 309 | 163 | 7 | 38 | 326 | 38 | 337 | 1.56e-62 | 203 |
MS.gene60708.t1 | AT2G22420 | 38.562 | 306 | 157 | 7 | 45 | 331 | 27 | 320 | 2.02e-62 | 202 |
MS.gene60708.t1 | AT4G16270 | 40.705 | 312 | 150 | 10 | 41 | 330 | 50 | 348 | 2.13e-62 | 203 |
MS.gene60708.t1 | AT3G49110 | 38.291 | 316 | 163 | 8 | 41 | 333 | 33 | 339 | 6.94e-62 | 202 |
MS.gene60708.t1 | AT1G05260 | 39.117 | 317 | 159 | 10 | 36 | 330 | 21 | 325 | 1.69e-61 | 200 |
MS.gene60708.t1 | AT5G58400 | 35.119 | 336 | 178 | 7 | 7 | 326 | 10 | 321 | 6.14e-61 | 198 |
MS.gene60708.t1 | AT5G05340 | 36.928 | 306 | 166 | 6 | 41 | 330 | 30 | 324 | 6.72e-61 | 198 |
MS.gene60708.t1 | AT5G17820 | 39.145 | 304 | 149 | 7 | 41 | 326 | 24 | 309 | 1.18e-60 | 197 |
MS.gene60708.t1 | AT5G19890 | 37.700 | 313 | 157 | 9 | 41 | 330 | 30 | 327 | 1.95e-60 | 197 |
MS.gene60708.t1 | AT1G14550 | 36.119 | 335 | 178 | 8 | 11 | 330 | 8 | 321 | 2.14e-60 | 197 |
MS.gene60708.t1 | AT2G35380 | 38.700 | 323 | 154 | 10 | 36 | 330 | 29 | 335 | 2.86e-60 | 197 |
MS.gene60708.t1 | AT1G44970 | 35.775 | 355 | 194 | 8 | 1 | 330 | 1 | 346 | 9.52e-60 | 196 |
MS.gene60708.t1 | AT5G51890 | 39.550 | 311 | 153 | 9 | 36 | 325 | 21 | 317 | 1.09e-59 | 195 |
MS.gene60708.t1 | AT2G38390 | 39.818 | 329 | 150 | 11 | 28 | 330 | 27 | 333 | 1.65e-59 | 196 |
MS.gene60708.t1 | AT1G68850 | 35.244 | 349 | 180 | 12 | 10 | 330 | 5 | 335 | 1.75e-59 | 195 |
MS.gene60708.t1 | AT5G17820 | 39.333 | 300 | 146 | 7 | 45 | 326 | 81 | 362 | 1.75e-59 | 196 |
MS.gene60708.t1 | AT3G03670 | 36.278 | 317 | 169 | 7 | 35 | 330 | 17 | 321 | 6.07e-59 | 193 |
MS.gene60708.t1 | AT4G26010 | 36.129 | 310 | 168 | 6 | 35 | 330 | 16 | 309 | 2.14e-58 | 191 |
MS.gene60708.t1 | AT5G42180 | 36.039 | 308 | 164 | 7 | 38 | 326 | 20 | 313 | 2.46e-58 | 191 |
MS.gene60708.t1 | AT4G26010 | 36.129 | 310 | 168 | 6 | 35 | 330 | 44 | 337 | 2.98e-58 | 192 |
MS.gene60708.t1 | AT2G18980 | 36.656 | 311 | 164 | 8 | 41 | 330 | 25 | 323 | 3.03e-58 | 191 |
MS.gene60708.t1 | AT4G11290 | 36.628 | 344 | 172 | 10 | 9 | 330 | 7 | 326 | 7.75e-58 | 190 |
MS.gene60708.t1 | AT5G15180 | 36.508 | 315 | 170 | 7 | 35 | 330 | 26 | 329 | 9.47e-58 | 190 |
MS.gene60708.t1 | AT4G30170 | 35.370 | 311 | 168 | 7 | 41 | 330 | 27 | 325 | 1.58e-57 | 189 |
MS.gene60708.t1 | AT1G05240 | 37.621 | 311 | 162 | 8 | 41 | 330 | 26 | 325 | 2.50e-57 | 189 |
MS.gene60708.t1 | AT1G05250 | 37.621 | 311 | 162 | 8 | 41 | 330 | 26 | 325 | 2.50e-57 | 189 |
MS.gene60708.t1 | AT4G37530 | 36.334 | 311 | 169 | 6 | 41 | 330 | 27 | 329 | 2.61e-57 | 189 |
MS.gene60708.t1 | AT2G38380 | 38.906 | 329 | 153 | 11 | 28 | 330 | 27 | 333 | 3.49e-57 | 189 |
MS.gene60708.t1 | AT5G64120 | 34.808 | 339 | 185 | 10 | 12 | 330 | 6 | 328 | 4.30e-57 | 189 |
MS.gene60708.t1 | AT3G01190 | 37.621 | 311 | 162 | 7 | 39 | 330 | 24 | 321 | 9.46e-56 | 185 |
MS.gene60708.t1 | AT1G14540 | 38.033 | 305 | 164 | 7 | 41 | 330 | 21 | 315 | 1.45e-55 | 184 |
MS.gene60708.t1 | AT1G34510 | 35.161 | 310 | 171 | 6 | 35 | 330 | 16 | 309 | 7.36e-55 | 182 |
MS.gene60708.t1 | AT5G58390 | 36.634 | 303 | 164 | 7 | 41 | 326 | 21 | 312 | 1.39e-54 | 182 |
MS.gene60708.t1 | AT4G37520 | 35.370 | 311 | 172 | 6 | 41 | 330 | 27 | 329 | 1.46e-54 | 182 |
MS.gene60708.t1 | AT5G39580 | 35.370 | 311 | 168 | 7 | 39 | 330 | 23 | 319 | 1.12e-53 | 179 |
MS.gene60708.t1 | AT5G67400 | 35.577 | 312 | 170 | 8 | 41 | 330 | 27 | 329 | 1.69e-52 | 177 |
MS.gene60708.t1 | AT2G34060 | 33.430 | 344 | 198 | 7 | 8 | 328 | 9 | 344 | 5.28e-52 | 176 |
MS.gene60708.t1 | AT5G19880 | 35.484 | 310 | 167 | 8 | 41 | 326 | 25 | 325 | 6.13e-52 | 175 |
MS.gene60708.t1 | AT4G37520 | 34.727 | 311 | 171 | 7 | 41 | 330 | 27 | 326 | 8.06e-52 | 175 |
MS.gene60708.t1 | AT3G49960 | 34.615 | 312 | 173 | 8 | 41 | 330 | 27 | 329 | 1.95e-51 | 174 |
MS.gene60708.t1 | AT4G21960 | 32.609 | 322 | 187 | 6 | 28 | 332 | 21 | 329 | 3.04e-51 | 173 |
MS.gene60708.t1 | AT5G24070 | 34.957 | 349 | 184 | 10 | 10 | 332 | 6 | 337 | 3.49e-51 | 174 |
MS.gene60708.t1 | AT5G40150 | 34.098 | 305 | 178 | 4 | 41 | 330 | 32 | 328 | 3.72e-51 | 173 |
MS.gene60708.t1 | AT2G41480 | 35.691 | 311 | 160 | 10 | 45 | 330 | 33 | 328 | 9.10e-51 | 172 |
MS.gene60708.t1 | AT4G17690 | 33.866 | 313 | 181 | 5 | 34 | 331 | 22 | 323 | 5.15e-50 | 170 |
MS.gene60708.t1 | AT5G64110 | 36.570 | 309 | 157 | 9 | 45 | 330 | 38 | 330 | 1.33e-49 | 169 |
MS.gene60708.t1 | AT3G28200 | 34.641 | 306 | 174 | 6 | 41 | 330 | 21 | 316 | 6.65e-49 | 167 |
MS.gene60708.t1 | AT1G77100 | 33.038 | 339 | 183 | 10 | 10 | 330 | 7 | 319 | 2.80e-48 | 165 |
MS.gene60708.t1 | AT2G24800 | 35.873 | 315 | 167 | 7 | 38 | 330 | 28 | 329 | 2.91e-48 | 166 |
MS.gene60708.t1 | AT4G33870 | 31.085 | 341 | 171 | 7 | 41 | 327 | 68 | 398 | 4.72e-47 | 164 |
MS.gene60708.t1 | AT2G35380 | 39.600 | 250 | 118 | 8 | 109 | 330 | 3 | 247 | 5.68e-47 | 160 |
MS.gene60708.t1 | AT2G43480 | 33.621 | 348 | 180 | 12 | 13 | 326 | 1 | 331 | 7.29e-46 | 159 |
MS.gene60708.t1 | AT3G17070 | 31.715 | 309 | 181 | 6 | 39 | 326 | 36 | 335 | 9.09e-45 | 157 |
MS.gene60708.t1 | AT5G64100 | 34.528 | 307 | 164 | 8 | 45 | 330 | 41 | 331 | 1.73e-44 | 155 |
MS.gene60708.t1 | AT4G37530 | 35.985 | 264 | 140 | 6 | 41 | 283 | 27 | 282 | 3.30e-44 | 154 |
MS.gene60708.t1 | AT1G30870 | 33.540 | 322 | 175 | 10 | 36 | 336 | 46 | 349 | 4.06e-44 | 155 |
MS.gene60708.t1 | AT2G39040 | 35.443 | 316 | 167 | 10 | 41 | 330 | 46 | 350 | 5.81e-44 | 155 |
MS.gene60708.t1 | AT5G22410 | 35.484 | 310 | 160 | 11 | 41 | 326 | 28 | 321 | 1.87e-43 | 153 |
MS.gene60708.t1 | AT5G47000 | 32.154 | 311 | 183 | 6 | 36 | 326 | 24 | 326 | 1.97e-43 | 153 |
MS.gene60708.t1 | AT2G37130 | 31.935 | 310 | 179 | 7 | 41 | 330 | 30 | 327 | 2.08e-43 | 153 |
MS.gene60708.t1 | AT4G31760 | 31.751 | 337 | 187 | 7 | 15 | 330 | 12 | 326 | 2.90e-43 | 152 |
MS.gene60708.t1 | AT2G37130 | 32.026 | 306 | 176 | 7 | 45 | 330 | 3 | 296 | 3.11e-43 | 151 |
MS.gene60708.t1 | AT4G25980 | 32.484 | 314 | 175 | 8 | 41 | 330 | 26 | 326 | 2.71e-42 | 150 |
MS.gene60708.t1 | AT1G24110 | 31.056 | 322 | 187 | 8 | 32 | 330 | 13 | 322 | 6.20e-41 | 146 |
MS.gene60708.t1 | AT3G17070 | 30.370 | 270 | 164 | 6 | 78 | 326 | 6 | 272 | 4.57e-33 | 124 |
MS.gene60708.t1 | AT5G39580 | 34.804 | 204 | 110 | 5 | 39 | 233 | 23 | 212 | 4.61e-31 | 118 |
MS.gene60708.t1 | AT4G25980 | 36.313 | 179 | 101 | 4 | 41 | 219 | 71 | 236 | 3.49e-28 | 111 |
MS.gene60708.t1 | AT2G24800 | 38.202 | 178 | 97 | 4 | 38 | 215 | 28 | 192 | 6.22e-25 | 101 |
MS.gene60708.t1 | AT4G32320 | 25.379 | 264 | 143 | 8 | 56 | 309 | 100 | 319 | 5.42e-13 | 69.3 |
MS.gene60708.t1 | AT3G42570 | 30.841 | 107 | 72 | 1 | 109 | 215 | 43 | 147 | 1.46e-11 | 62.4 |
Find 67 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTTGCTGCTATGCTTAAAA+TGG | 0.176723 | 1.2:+71064378 | MS.gene60708:CDS |
AAGTAGGACAAGTTTGTTTA+AGG | 0.199321 | 1.2:-71064171 | None:intergenic |
TCCATGACAGGGTCTTGTTT+TGG | 0.232885 | 1.2:-71064130 | None:intergenic |
TTGTGATGGATCAGTATTAT+TGG | 0.364319 | 1.2:+71063580 | MS.gene60708:CDS |
ATTGTTGTTGTGTTGCTTGT+TGG | 0.371690 | 1.2:-71063996 | None:intergenic |
CTTCACTATAGGAGGAGGTT+TGG | 0.382309 | 1.2:-71063190 | None:intergenic |
CACCACCAAACTTGAGTCTT+AGG | 0.384280 | 1.2:+71063636 | MS.gene60708:CDS |
CAATGGCTTATGCTTCTTGT+AGG | 0.384357 | 1.2:+71063094 | None:intergenic |
CTACTACATCTGTAGGGTTA+AGG | 0.401776 | 1.2:-71064043 | None:intergenic |
CTGATGATAGATTCAAGCTT+AGG | 0.402937 | 1.2:-71063246 | None:intergenic |
ACTTCATGACTGCTTTGTTC+AGG | 0.412130 | 1.2:+71063331 | MS.gene60708:CDS |
ATTAGCACGAATTTCTCCTT+TGG | 0.416931 | 1.2:-71064425 | None:intergenic |
TTCGTGCTAATTGCTCTGTT+AGG | 0.418468 | 1.2:+71064437 | MS.gene60708:CDS |
TCTTATCAGTGTACAAATCT+TGG | 0.422683 | 1.2:-71064297 | None:intergenic |
GGTGGTGCATCTTTCTCACT+TGG | 0.424168 | 1.2:-71063620 | None:intergenic |
CATGATAGTCCCTTCACTAT+AGG | 0.430598 | 1.2:-71063201 | None:intergenic |
TTCGATTATCTTGAAGGCCT+CGG | 0.436787 | 1.2:-71063660 | None:intergenic |
AAAGGTATGGATTAGAAGAA+AGG | 0.455618 | 1.2:-71063130 | None:intergenic |
CGTTGATCTTATGAACCGTC+AGG | 0.468509 | 1.2:+71064258 | MS.gene60708:CDS |
AAGATTTGTACACTGATAAG+AGG | 0.468841 | 1.2:+71064299 | MS.gene60708:CDS |
TATTTATTATCAAATCTGTT+GGG | 0.477731 | 1.2:-71064232 | None:intergenic |
GATGATGTTGGTCAAGCTGC+TGG | 0.480697 | 1.2:+71063294 | MS.gene60708:CDS |
GTATTTATTATCAAATCTGT+TGG | 0.486993 | 1.2:-71064233 | None:intergenic |
TAATCCATCTCTCCTTCCTA+AGG | 0.488025 | 1.2:-71063931 | None:intergenic |
AACTGTGGTGTTATCAGTGT+TGG | 0.488314 | 1.2:-71064194 | None:intergenic |
GTTGCTGCTATGCTTAAAAT+GGG | 0.493223 | 1.2:+71064379 | MS.gene60708:CDS |
TCGGTCCTAAGACTCAAGTT+TGG | 0.499279 | 1.2:-71063641 | None:intergenic |
CAAATCTTTCCTTACTTCTG+TGG | 0.502716 | 1.2:+71064471 | MS.gene60708:CDS |
ATGAAAATGCAGGGTTGTGA+TGG | 0.506653 | 1.2:+71063566 | MS.gene60708:intron |
CATCTTCCACCACAGAAGTA+AGG | 0.507687 | 1.2:-71064480 | None:intergenic |
GATGTGAGAAAATGAAAGAA+AGG | 0.511303 | 1.2:-71063148 | None:intergenic |
ACAGATGTAGTAGCACTCTC+AGG | 0.517970 | 1.2:+71064053 | MS.gene60708:CDS |
GAGAAAATGAAAGAAAGGTA+TGG | 0.521173 | 1.2:-71063143 | None:intergenic |
AACAGCATCACGAGCGGCAA+TGG | 0.523212 | 1.2:-71063744 | None:intergenic |
ATCTTTCCTTACTTCTGTGG+TGG | 0.523496 | 1.2:+71064474 | MS.gene60708:CDS |
TGGATTAACATTTGCAACAC+AGG | 0.523958 | 1.2:+71063947 | MS.gene60708:CDS |
CCAGACTACAAAATTCCCTT+AGG | 0.524500 | 1.2:+71063915 | MS.gene60708:CDS |
CTATAGTGAAGGGACTATCA+TGG | 0.530164 | 1.2:+71063202 | MS.gene60708:CDS |
GTCCTAAGACTCAAGTTTGG+TGG | 0.530334 | 1.2:-71063638 | None:intergenic |
GTTGTGTTGCTTGTTGGTGA+AGG | 0.532553 | 1.2:-71063990 | None:intergenic |
AAGATCTTCAATGATGATGT+TGG | 0.544356 | 1.2:+71063282 | MS.gene60708:CDS |
GAGAGTGCTACTACATCTGT+AGG | 0.561499 | 1.2:-71064050 | None:intergenic |
CCTGTCATGGACAAAACCTA+TGG | 0.564791 | 1.2:+71064142 | MS.gene60708:CDS |
AGTCCCTTCACTATAGGAGG+AGG | 0.565917 | 1.2:-71063195 | None:intergenic |
GTGTTATCAGTGTTGGAAGT+AGG | 0.569777 | 1.2:-71064187 | None:intergenic |
GATAGTCCCTTCACTATAGG+AGG | 0.573316 | 1.2:-71063198 | None:intergenic |
CCGTCAGGGTCTCTTTACTT+CGG | 0.573471 | 1.2:+71064273 | MS.gene60708:CDS |
GTACACTGATAAGAGGACTA+AGG | 0.574738 | 1.2:+71064306 | MS.gene60708:CDS |
ATTCCCTTAGGAAGGAGAGA+TGG | 0.574750 | 1.2:+71063927 | MS.gene60708:CDS |
TACTTCTGTGGTGGAAGATG+CGG | 0.576534 | 1.2:+71064483 | MS.gene60708:CDS |
ACTACAAAATTCCCTTAGGA+AGG | 0.582731 | 1.2:+71063919 | MS.gene60708:CDS |
CAAACCTCCTCCTATAGTGA+AGG | 0.591712 | 1.2:+71063191 | MS.gene60708:CDS |
AATCCATCTCTCCTTCCTAA+GGG | 0.592767 | 1.2:-71063930 | None:intergenic |
GATGGATCAGTATTATTGGA+TGG | 0.596952 | 1.2:+71063584 | MS.gene60708:CDS |
TTCTGTGGTGGAAGATGCGG+TGG | 0.600054 | 1.2:+71064486 | MS.gene60708:CDS |
ACAAAGCAGTCATGAAGTGA+AGG | 0.617100 | 1.2:-71063326 | None:intergenic |
AGAGTGCTACTACATCTGTA+GGG | 0.620697 | 1.2:-71064049 | None:intergenic |
CCCAAAACAAGACCCTGTCA+TGG | 0.624304 | 1.2:+71064129 | MS.gene60708:CDS |
AAACCTCCTCCTATAGTGAA+GGG | 0.624659 | 1.2:+71063192 | MS.gene60708:CDS |
ACTACGAATATCTAGAACTG+TGG | 0.661587 | 1.2:-71064209 | None:intergenic |
ATTAACATTTGCAACACAGG+AGG | 0.668426 | 1.2:+71063950 | MS.gene60708:CDS |
GATGTAGTAGCACTCTCAGG+TGG | 0.686682 | 1.2:+71064056 | MS.gene60708:CDS |
GTTGATCTTATGAACCGTCA+GGG | 0.688433 | 1.2:+71064259 | MS.gene60708:CDS |
AGTAATATAGAGAAGCAGTG+TGG | 0.694261 | 1.2:+71063692 | MS.gene60708:CDS |
TAGGAAAACAGCATCACGAG+CGG | 0.695239 | 1.2:-71063750 | None:intergenic |
AAACTTGAGTCTTAGGACCG+AGG | 0.714645 | 1.2:+71063643 | MS.gene60708:CDS |
CCGAAGTAAAGAGACCCTGA+CGG | 0.722315 | 1.2:-71064273 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATTATATTTGGTTATTTA+TGG | + | chr1.2:71063535-71063554 | MS.gene60708:intron | 10.0% |
!! | AAATCCAAACTTATTATATT+TGG | + | chr1.2:71063525-71063544 | MS.gene60708:intron | 15.0% |
!! | AACTATAAACAATACTAATT+AGG | + | chr1.2:71063399-71063418 | MS.gene60708:intron | 15.0% |
!! | ATAACCAAATATAATAAGTT+TGG | - | chr1.2:71063532-71063551 | None:intergenic | 15.0% |
!! | TATTTATTATCAAATCTGTT+GGG | - | chr1.2:71064235-71064254 | None:intergenic | 15.0% |
!! | AAAATAAAGGTTTACTTACT+AGG | - | chr1.2:71063772-71063791 | None:intergenic | 20.0% |
!! | GTATATTTAGCTAATTAGTT+AGG | + | chr1.2:71063368-71063387 | MS.gene60708:intron | 20.0% |
!! | GTATTTATTATCAAATCTGT+TGG | - | chr1.2:71064236-71064255 | None:intergenic | 20.0% |
!! | GTTAAAAAAATGAAAATGCA+GGG | + | chr1.2:71063557-71063576 | MS.gene60708:intron | 20.0% |
! | GGTTAAAAAAATGAAAATGC+AGG | + | chr1.2:71063556-71063575 | MS.gene60708:intron | 25.0% |
!!! | AAGTTTTTCGATTATCTTGA+AGG | - | chr1.2:71063669-71063688 | None:intergenic | 25.0% |
!!! | CAATGTTTTATTGACATATG+TGG | + | chr1.2:71063465-71063484 | MS.gene60708:intron | 25.0% |
AAGATTTGTACACTGATAAG+AGG | + | chr1.2:71064299-71064318 | MS.gene60708:CDS | 30.0% | |
CCAACTTCTCACAAAAATAA+AGG | - | chr1.2:71063785-71063804 | None:intergenic | 30.0% | |
GAGAAAATGAAAGAAAGGTA+TGG | - | chr1.2:71063146-71063165 | None:intergenic | 30.0% | |
GATGTGAGAAAATGAAAGAA+AGG | - | chr1.2:71063151-71063170 | None:intergenic | 30.0% | |
TCTTATCAGTGTACAAATCT+TGG | - | chr1.2:71064300-71064319 | None:intergenic | 30.0% | |
TGAATCTGTTTAGCTAACTT+TGG | + | chr1.2:71063502-71063521 | MS.gene60708:intron | 30.0% | |
! | AAGATCTTCAATGATGATGT+TGG | + | chr1.2:71063282-71063301 | MS.gene60708:CDS | 30.0% |
! | AAGTAGGACAAGTTTGTTTA+AGG | - | chr1.2:71064174-71064193 | None:intergenic | 30.0% |
! | ATAGAAGCTGTACATTTTCA+CGG | - | chr1.2:71063444-71063463 | None:intergenic | 30.0% |
!! | AAAGGTATGGATTAGAAGAA+AGG | - | chr1.2:71063133-71063152 | None:intergenic | 30.0% |
!! | TTGTGATGGATCAGTATTAT+TGG | + | chr1.2:71063580-71063599 | MS.gene60708:CDS | 30.0% |
!! | TTGTTTAAGGTTTTTGCCAT+AGG | - | chr1.2:71064161-71064180 | None:intergenic | 30.0% |
!!! | CCTTTATTTTTGTGAGAAGT+TGG | + | chr1.2:71063782-71063801 | MS.gene60708:intron | 30.0% |
ACTACAAAATTCCCTTAGGA+AGG | + | chr1.2:71063919-71063938 | MS.gene60708:CDS | 35.0% | |
AGTAATATAGAGAAGCAGTG+TGG | + | chr1.2:71063692-71063711 | MS.gene60708:CDS | 35.0% | |
ATTAACATTTGCAACACAGG+AGG | + | chr1.2:71063950-71063969 | MS.gene60708:CDS | 35.0% | |
ATTAGCACGAATTTCTCCTT+TGG | - | chr1.2:71064428-71064447 | None:intergenic | 35.0% | |
CAAATCTTTCCTTACTTCTG+TGG | + | chr1.2:71064471-71064490 | MS.gene60708:CDS | 35.0% | |
CTGATGATAGATTCAAGCTT+AGG | - | chr1.2:71063249-71063268 | None:intergenic | 35.0% | |
GATGGATCAGTATTATTGGA+TGG | + | chr1.2:71063584-71063603 | MS.gene60708:CDS | 35.0% | |
GTTGCTGCTATGCTTAAAAT+GGG | + | chr1.2:71064379-71064398 | MS.gene60708:CDS | 35.0% | |
TGGATTAACATTTGCAACAC+AGG | + | chr1.2:71063947-71063966 | MS.gene60708:CDS | 35.0% | |
TGTTGCTGCTATGCTTAAAA+TGG | + | chr1.2:71064378-71064397 | MS.gene60708:CDS | 35.0% | |
! | ACTACGAATATCTAGAACTG+TGG | - | chr1.2:71064212-71064231 | None:intergenic | 35.0% |
! | AGGACATTTTGAATCGTAGA+AGG | - | chr1.2:71063229-71063248 | None:intergenic | 35.0% |
! | CATGATTTTACATTGCAGTC+AGG | + | chr1.2:71063888-71063907 | MS.gene60708:intron | 35.0% |
!! | ATTGTTGTTGTGTTGCTTGT+TGG | - | chr1.2:71063999-71064018 | None:intergenic | 35.0% |
!!! | AATGTTTTGACTGGAACCAA+AGG | + | chr1.2:71064409-71064428 | MS.gene60708:CDS | 35.0% |
!!! | TGTAGGGTTAAGGTTTTTTG+TGG | - | chr1.2:71064036-71064055 | None:intergenic | 35.0% |
AAACCTCCTCCTATAGTGAA+GGG | + | chr1.2:71063192-71063211 | MS.gene60708:CDS | 40.0% | |
AATCCATCTCTCCTTCCTAA+GGG | - | chr1.2:71063933-71063952 | None:intergenic | 40.0% | |
ACAAAGCAGTCATGAAGTGA+AGG | - | chr1.2:71063329-71063348 | None:intergenic | 40.0% | |
ATCTTTCCTTACTTCTGTGG+TGG | + | chr1.2:71064474-71064493 | MS.gene60708:CDS | 40.0% | |
ATGAAAATGCAGGGTTGTGA+TGG | + | chr1.2:71063566-71063585 | MS.gene60708:intron | 40.0% | |
CATGATAGTCCCTTCACTAT+AGG | - | chr1.2:71063204-71063223 | None:intergenic | 40.0% | |
CCAGACTACAAAATTCCCTT+AGG | + | chr1.2:71063915-71063934 | MS.gene60708:CDS | 40.0% | |
CTACTACATCTGTAGGGTTA+AGG | - | chr1.2:71064046-71064065 | None:intergenic | 40.0% | |
CTATAGTGAAGGGACTATCA+TGG | + | chr1.2:71063202-71063221 | MS.gene60708:CDS | 40.0% | |
GTACACTGATAAGAGGACTA+AGG | + | chr1.2:71064306-71064325 | MS.gene60708:CDS | 40.0% | |
GTTGATCTTATGAACCGTCA+GGG | + | chr1.2:71064259-71064278 | MS.gene60708:CDS | 40.0% | |
TAATCCATCTCTCCTTCCTA+AGG | - | chr1.2:71063934-71063953 | None:intergenic | 40.0% | |
TTCGATTATCTTGAAGGCCT+CGG | - | chr1.2:71063663-71063682 | None:intergenic | 40.0% | |
TTCGTGCTAATTGCTCTGTT+AGG | + | chr1.2:71064437-71064456 | MS.gene60708:CDS | 40.0% | |
! | ACTTCATGACTGCTTTGTTC+AGG | + | chr1.2:71063331-71063350 | MS.gene60708:CDS | 40.0% |
! | AGAGTGCTACTACATCTGTA+GGG | - | chr1.2:71064052-71064071 | None:intergenic | 40.0% |
! | CCTAAGGGAATTTTGTAGTC+TGG | - | chr1.2:71063918-71063937 | None:intergenic | 40.0% |
! | GATTTTACATTGCAGTCAGG+AGG | + | chr1.2:71063891-71063910 | MS.gene60708:intron | 40.0% |
! | GTGTTATCAGTGTTGGAAGT+AGG | - | chr1.2:71064190-71064209 | None:intergenic | 40.0% |
!! | AACTGTGGTGTTATCAGTGT+TGG | - | chr1.2:71064197-71064216 | None:intergenic | 40.0% |
!! | CATAGGTTTTGTCCATGACA+GGG | - | chr1.2:71064144-71064163 | None:intergenic | 40.0% |
!!! | GGACAGCTTAATGTTTTGAC+TGG | + | chr1.2:71064400-71064419 | MS.gene60708:CDS | 40.0% |
AAACTTGAGTCTTAGGACCG+AGG | + | chr1.2:71063643-71063662 | MS.gene60708:CDS | 45.0% | |
ACAGATGTAGTAGCACTCTC+AGG | + | chr1.2:71064053-71064072 | MS.gene60708:CDS | 45.0% | |
ATTCCCTTAGGAAGGAGAGA+TGG | + | chr1.2:71063927-71063946 | MS.gene60708:CDS | 45.0% | |
CAAACCTCCTCCTATAGTGA+AGG | + | chr1.2:71063191-71063210 | MS.gene60708:CDS | 45.0% | |
CACCACCAAACTTGAGTCTT+AGG | + | chr1.2:71063636-71063655 | MS.gene60708:CDS | 45.0% | |
CATCTTCCACCACAGAAGTA+AGG | - | chr1.2:71064483-71064502 | None:intergenic | 45.0% | |
CCTGTCATGGACAAAACCTA+TGG | + | chr1.2:71064142-71064161 | MS.gene60708:CDS | 45.0% | |
CGTTGATCTTATGAACCGTC+AGG | + | chr1.2:71064258-71064277 | MS.gene60708:CDS | 45.0% | |
CTTCACTATAGGAGGAGGTT+TGG | - | chr1.2:71063193-71063212 | None:intergenic | 45.0% | |
GATAGTCCCTTCACTATAGG+AGG | - | chr1.2:71063201-71063220 | None:intergenic | 45.0% | |
GTCCTAAGACTCAAGTTTGG+TGG | - | chr1.2:71063641-71063660 | None:intergenic | 45.0% | |
TAGGAAAACAGCATCACGAG+CGG | - | chr1.2:71063753-71063772 | None:intergenic | 45.0% | |
TCGGTCCTAAGACTCAAGTT+TGG | - | chr1.2:71063644-71063663 | None:intergenic | 45.0% | |
! | TACTTCTGTGGTGGAAGATG+CGG | + | chr1.2:71064483-71064502 | MS.gene60708:CDS | 45.0% |
!! | CCATAGGTTTTGTCCATGAC+AGG | - | chr1.2:71064145-71064164 | None:intergenic | 45.0% |
!! | GAGAGTGCTACTACATCTGT+AGG | - | chr1.2:71064053-71064072 | None:intergenic | 45.0% |
!! | GTTGTGTTGCTTGTTGGTGA+AGG | - | chr1.2:71063993-71064012 | None:intergenic | 45.0% |
!!! | CCATGACAGGGTCTTGTTTT+GGG | - | chr1.2:71064132-71064151 | None:intergenic | 45.0% |
!!! | TCCATGACAGGGTCTTGTTT+TGG | - | chr1.2:71064133-71064152 | None:intergenic | 45.0% |
AGTCCCTTCACTATAGGAGG+AGG | - | chr1.2:71063198-71063217 | None:intergenic | 50.0% | |
CCCAAAACAAGACCCTGTCA+TGG | + | chr1.2:71064129-71064148 | MS.gene60708:CDS | 50.0% | |
CCGAAGTAAAGAGACCCTGA+CGG | - | chr1.2:71064276-71064295 | None:intergenic | 50.0% | |
CCGTCAGGGTCTCTTTACTT+CGG | + | chr1.2:71064273-71064292 | MS.gene60708:CDS | 50.0% | |
CTCAGGTGGTCACACACAAT+AGG | + | chr1.2:71064070-71064089 | MS.gene60708:intron | 50.0% | |
GATGATGTTGGTCAAGCTGC+TGG | + | chr1.2:71063294-71063313 | MS.gene60708:CDS | 50.0% | |
GATGTAGTAGCACTCTCAGG+TGG | + | chr1.2:71064056-71064075 | MS.gene60708:CDS | 50.0% | |
GGTGGTGCATCTTTCTCACT+TGG | - | chr1.2:71063623-71063642 | None:intergenic | 50.0% | |
AACAGCATCACGAGCGGCAA+TGG | - | chr1.2:71063747-71063766 | None:intergenic | 55.0% | |
! | TTCTGTGGTGGAAGATGCGG+TGG | + | chr1.2:71064486-71064505 | MS.gene60708:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 71063096 | 71064528 | 71063096 | ID=MS.gene60708 |
chr1.2 | mRNA | 71063096 | 71064528 | 71063096 | ID=MS.gene60708.t1;Parent=MS.gene60708 |
chr1.2 | exon | 71063096 | 71063352 | 71063096 | ID=MS.gene60708.t1.exon1;Parent=MS.gene60708.t1 |
chr1.2 | CDS | 71063096 | 71063352 | 71063096 | ID=cds.MS.gene60708.t1;Parent=MS.gene60708.t1 |
chr1.2 | exon | 71063421 | 71063442 | 71063421 | ID=MS.gene60708.t1.exon2;Parent=MS.gene60708.t1 |
chr1.2 | CDS | 71063421 | 71063442 | 71063421 | ID=cds.MS.gene60708.t1;Parent=MS.gene60708.t1 |
chr1.2 | exon | 71063578 | 71063772 | 71063578 | ID=MS.gene60708.t1.exon3;Parent=MS.gene60708.t1 |
chr1.2 | CDS | 71063578 | 71063772 | 71063578 | ID=cds.MS.gene60708.t1;Parent=MS.gene60708.t1 |
chr1.2 | exon | 71063906 | 71064077 | 71063906 | ID=MS.gene60708.t1.exon4;Parent=MS.gene60708.t1 |
chr1.2 | CDS | 71063906 | 71064077 | 71063906 | ID=cds.MS.gene60708.t1;Parent=MS.gene60708.t1 |
chr1.2 | exon | 71064119 | 71064528 | 71064119 | ID=MS.gene60708.t1.exon5;Parent=MS.gene60708.t1 |
chr1.2 | CDS | 71064119 | 71064528 | 71064119 | ID=cds.MS.gene60708.t1;Parent=MS.gene60708.t1 |
Gene Sequence |
Protein sequence |