AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene61089

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61089.t1 MTR_6g043240 56.857 350 142 4 8 354 9 352 1.58e-144 413
MS.gene61089.t1 MTR_6g043280 53.116 337 152 5 1 336 1 332 5.49e-125 362
MS.gene61089.t1 MTR_6g043460 48.830 342 164 5 1 340 1 333 7.38e-111 327
MS.gene61089.t1 MTR_5g021060 46.780 295 148 5 45 332 34 326 2.94e-87 266
MS.gene61089.t1 MTR_2g029750 45.342 322 163 7 41 352 29 347 3.20e-87 267
MS.gene61089.t1 MTR_0155s0040 43.686 293 158 4 40 332 26 311 7.26e-87 265
MS.gene61089.t1 MTR_2g029815 44.762 315 162 6 34 339 22 333 2.83e-86 265
MS.gene61089.t1 MTR_3g092990 47.213 305 148 6 41 336 26 326 8.31e-86 263
MS.gene61089.t1 MTR_2g029860 41.983 343 178 7 19 352 16 346 2.11e-85 262
MS.gene61089.t1 MTR_1g077000 42.123 292 162 4 41 332 39 323 2.05e-84 259
MS.gene61089.t1 MTR_8g076820 44.816 299 156 5 45 336 34 330 3.39e-84 258
MS.gene61089.t1 MTR_2g029830 43.034 323 172 6 41 354 28 347 3.05e-83 257
MS.gene61089.t1 MTR_1g086320 45.928 307 152 7 41 336 30 333 4.86e-83 256
MS.gene61089.t1 MTR_2g028980 42.690 342 171 8 12 339 3 333 5.02e-83 256
MS.gene61089.t1 MTR_8g075100 45.215 303 150 6 41 336 26 319 5.18e-83 255
MS.gene61089.t1 MTR_2g029560 44.051 311 162 6 41 342 24 331 8.73e-83 255
MS.gene61089.t1 MTR_2g029820 44.481 308 159 6 41 339 29 333 1.48e-82 255
MS.gene61089.t1 MTR_7g093370 42.249 329 170 7 13 332 50 367 4.13e-82 254
MS.gene61089.t1 MTR_2g088770 45.246 305 153 7 41 336 26 325 8.02e-82 252
MS.gene61089.t1 MTR_2g040000 41.691 343 174 9 5 336 4 331 2.03e-81 251
MS.gene61089.t1 MTR_2g029740 43.175 315 167 6 45 350 33 344 2.89e-81 252
MS.gene61089.t1 MTR_4g125940 42.105 342 172 8 5 336 4 329 5.18e-81 250
MS.gene61089.t1 MTR_4g029170 40.248 323 185 6 17 336 4 321 1.03e-80 249
MS.gene61089.t1 MTR_2g029730 43.574 319 170 5 41 351 25 341 1.12e-80 250
MS.gene61089.t1 MTR_2g029800 42.857 308 164 6 41 339 29 333 1.13e-80 250
MS.gene61089.t1 MTR_1g086490 44.904 314 152 7 41 336 30 340 2.56e-80 249
MS.gene61089.t1 MTR_1g022970 44.518 301 157 5 40 332 45 343 3.90e-80 249
MS.gene61089.t1 MTR_5g022870 42.857 301 156 7 39 332 21 312 5.54e-80 247
MS.gene61089.t1 MTR_4g095450 42.761 297 166 3 41 334 27 322 5.85e-80 247
MS.gene61089.t1 MTR_2g084110 42.321 293 164 4 45 336 29 317 7.74e-80 247
MS.gene61089.t1 MTR_7g029030 43.289 298 165 4 41 336 25 320 8.96e-80 247
MS.gene61089.t1 MTR_1g101830 41.538 325 167 7 19 336 14 322 3.17e-79 245
MS.gene61089.t1 MTR_4g083710 42.525 301 165 5 41 336 27 324 6.88e-79 244
MS.gene61089.t1 MTR_1g038680 43.709 302 158 7 45 336 33 332 8.87e-79 244
MS.gene61089.t1 MTR_2g084080 41.638 293 166 4 45 336 29 317 9.12e-79 244
MS.gene61089.t1 MTR_7g086820 42.810 306 166 4 35 337 14 313 9.25e-79 244
MS.gene61089.t1 MTR_1g054205 41.722 302 163 7 41 332 24 322 2.34e-78 243
MS.gene61089.t1 MTR_3g466200 41.562 320 172 4 16 332 9 316 2.65e-78 243
MS.gene61089.t1 MTR_5g017850 42.071 309 169 5 35 336 21 326 5.52e-78 243
MS.gene61089.t1 MTR_2g008710 43.831 308 156 6 39 336 25 325 8.16e-78 242
MS.gene61089.t1 MTR_5g017860 42.903 310 165 5 35 336 21 326 1.08e-77 242
MS.gene61089.t1 MTR_4g046713 42.809 299 161 5 45 336 31 326 1.09e-77 242
MS.gene61089.t1 MTR_7g086870 41.216 296 168 3 41 336 22 311 1.40e-77 241
MS.gene61089.t1 MTR_7g072510 42.282 298 165 5 41 336 20 312 1.45e-77 241
MS.gene61089.t1 MTR_7g107520 41.818 330 172 7 13 336 5 320 1.65e-77 241
MS.gene61089.t1 MTR_2g029850 42.679 321 171 7 41 352 29 345 4.55e-77 241
MS.gene61089.t1 MTR_2g084020 42.177 294 164 5 45 336 29 318 1.00e-76 239
MS.gene61089.t1 MTR_5g074970 42.193 301 165 4 41 336 30 326 1.14e-76 239
MS.gene61089.t1 MTR_5g016010 41.234 308 170 5 36 334 22 327 1.16e-76 239
MS.gene61089.t1 MTR_5g014100 43.322 307 154 9 45 336 30 331 1.55e-76 239
MS.gene61089.t1 MTR_7g072480 42.320 319 168 6 16 332 8 312 2.37e-76 238
MS.gene61089.t1 MTR_3g072190 39.692 325 183 6 9 332 2 314 2.99e-76 238
MS.gene61089.t1 MTR_1g025980 40.984 305 165 7 37 334 20 316 4.32e-76 237
MS.gene61089.t1 MTR_5g049280 37.168 339 194 8 10 336 6 337 5.07e-76 238
MS.gene61089.t1 MTR_2g084010 41.837 294 165 5 45 336 29 318 1.04e-75 236
MS.gene61089.t1 MTR_4g029200 43.607 305 165 5 34 336 39 338 1.05e-75 237
MS.gene61089.t1 MTR_3g094650 41.017 295 167 4 41 332 28 318 1.09e-75 236
MS.gene61089.t1 MTR_5g074760 41.558 308 171 6 36 338 20 323 2.36e-75 236
MS.gene61089.t1 MTR_4g074990 39.412 340 167 7 1 336 1 305 8.84e-75 233
MS.gene61089.t1 MTR_4g074995 41.196 301 156 5 41 336 24 308 9.90e-75 233
MS.gene61089.t1 MTR_4g029180 40.476 294 170 4 45 336 31 321 1.36e-74 234
MS.gene61089.t1 MTR_4g127670 41.447 304 166 6 41 336 24 323 2.00e-74 233
MS.gene61089.t1 MTR_2g084000 38.906 329 183 7 10 336 7 319 2.22e-74 233
MS.gene61089.t1 MTR_2g084090 40.476 294 169 4 45 336 29 318 3.82e-74 232
MS.gene61089.t1 MTR_6g027440 39.344 305 177 3 35 336 15 314 1.11e-73 231
MS.gene61089.t1 MTR_4g030890 43.289 298 158 5 45 336 104 396 1.21e-73 234
MS.gene61089.t1 MTR_3g092990 44.918 305 144 7 41 336 26 315 1.22e-73 231
MS.gene61089.t1 MTR_5g083860 40.468 299 171 4 41 336 31 325 1.37e-73 231
MS.gene61089.t1 MTR_2g029910 40.694 317 175 6 45 352 34 346 3.81e-73 231
MS.gene61089.t1 MTR_4g114210 43.279 305 153 8 41 333 21 317 4.44e-72 227
MS.gene61089.t1 MTR_4g122640 38.323 334 197 6 9 336 6 336 1.04e-71 227
MS.gene61089.t1 MTR_4g132490 40.065 307 173 6 38 336 24 327 1.40e-71 226
MS.gene61089.t1 MTR_2g437770 40.728 302 163 7 41 336 50 341 1.92e-71 226
MS.gene61089.t1 MTR_4g125940 44.928 276 138 6 71 336 3 274 1.99e-71 224
MS.gene61089.t1 MTR_5g074740 40.717 307 173 6 36 337 20 322 2.67e-71 225
MS.gene61089.t1 MTR_4g031140 40.940 298 165 5 45 336 32 324 4.96e-71 225
MS.gene61089.t1 MTR_1g009750 39.672 305 172 6 41 336 27 328 7.65e-71 224
MS.gene61089.t1 MTR_4g087965 39.104 335 192 6 11 334 11 344 9.77e-71 224
MS.gene61089.t1 MTR_3g094670 40.339 295 169 4 41 332 28 318 1.82e-70 223
MS.gene61089.t1 MTR_5g074860 40.604 298 166 8 41 332 29 321 6.31e-70 222
MS.gene61089.t1 MTR_7g026990 40.614 293 168 4 45 336 35 322 1.25e-69 221
MS.gene61089.t1 MTR_1g090760 38.689 305 178 4 41 337 28 331 1.62e-69 221
MS.gene61089.t1 MTR_5g074710 39.286 308 176 7 36 337 20 322 3.19e-69 220
MS.gene61089.t1 MTR_4g074980 40.203 296 151 6 41 336 25 294 1.37e-67 214
MS.gene61089.t1 MTR_3g094630 40.000 295 170 4 41 332 28 318 1.68e-66 213
MS.gene61089.t1 MTR_2g029830 42.086 278 149 6 86 354 5 279 1.78e-66 211
MS.gene61089.t1 MTR_4g029190 42.955 291 157 6 50 336 55 340 2.69e-66 213
MS.gene61089.t1 MTR_1g066710 36.184 304 183 4 41 338 27 325 7.04e-66 211
MS.gene61089.t1 MTR_3g466180 41.156 294 166 5 41 332 31 319 9.08e-66 211
MS.gene61089.t1 MTR_4g133800 38.926 298 167 6 46 337 46 334 1.59e-65 211
MS.gene61089.t1 MTR_8g062780 37.419 310 183 5 36 336 17 324 2.10e-65 210
MS.gene61089.t1 MTR_3g467600 38.438 333 182 11 10 336 9 324 4.74e-65 209
MS.gene61089.t1 MTR_1g115900 39.867 301 170 7 41 336 27 321 6.94e-64 206
MS.gene61089.t1 MTR_4g074980 44.828 232 121 4 41 268 25 253 7.87e-64 204
MS.gene61089.t1 MTR_1g066380 34.426 305 193 3 38 338 24 325 4.99e-63 204
MS.gene61089.t1 MTR_4g132110 34.983 303 190 3 40 338 31 330 5.45e-63 204
MS.gene61089.t1 MTR_1g066640 34.437 302 191 3 41 338 27 325 4.06e-61 199
MS.gene61089.t1 MTR_2g099175 36.628 344 195 8 7 337 3 336 5.81e-61 199
MS.gene61089.t1 MTR_4g132110 34.416 308 190 4 40 338 31 335 8.76e-61 199
MS.gene61089.t1 MTR_1g009750 36.964 303 166 7 41 336 27 311 5.39e-60 196
MS.gene61089.t1 MTR_0286s0010 37.248 298 180 4 41 332 34 330 1.44e-59 195
MS.gene61089.t1 MTR_6g008075 37.248 298 180 4 41 332 34 330 1.44e-59 195
MS.gene61089.t1 MTR_2g067440 34.650 329 175 7 41 333 60 384 4.50e-59 196
MS.gene61089.t1 MTR_1g098320 91.089 101 5 1 257 357 45 141 1.86e-58 186
MS.gene61089.t1 MTR_3g072190 38.400 250 149 4 84 332 2 247 1.93e-58 190
MS.gene61089.t1 MTR_3g105790 36.688 308 181 5 37 336 21 322 2.54e-57 189
MS.gene61089.t1 MTR_2g008160 35.948 306 180 7 41 336 24 323 9.00e-57 187
MS.gene61089.t1 MTR_1g066680 33.993 303 190 5 41 338 27 324 3.71e-56 186
MS.gene61089.t1 MTR_2g077990 34.139 331 177 7 41 333 76 403 5.79e-56 188
MS.gene61089.t1 MTR_2g078610 34.139 331 177 7 41 333 76 403 8.13e-56 187
MS.gene61089.t1 MTR_2g008730 37.013 308 153 6 39 336 25 301 1.48e-54 181
MS.gene61089.t1 MTR_2g078280 34.062 320 170 7 41 322 76 392 3.15e-51 175
MS.gene61089.t1 MTR_5g033470 34.641 306 189 5 41 336 73 377 8.13e-51 174
MS.gene61089.t1 MTR_1g066380 34.884 258 161 3 85 338 3 257 3.18e-50 169
MS.gene61089.t1 MTR_5g074860 34.228 298 146 8 41 332 29 282 6.57e-48 164
MS.gene61089.t1 MTR_2g067450 34.219 301 186 6 41 333 11 307 8.78e-48 164
MS.gene61089.t1 MTR_2g008160 33.113 302 159 7 41 336 24 288 1.51e-45 157
MS.gene61089.t1 MTR_0147s0010 31.250 320 176 7 41 333 77 379 7.75e-45 158
MS.gene61089.t1 MTR_5g074700 39.381 226 119 6 115 337 5 215 1.69e-44 152
MS.gene61089.t1 MTR_2g029880 42.718 206 99 6 154 352 9 202 6.26e-43 148
MS.gene61089.t1 MTR_3g105790 36.111 252 147 5 93 336 1 246 1.02e-39 141
MS.gene61089.t1 MTR_2g008160 39.205 176 101 3 41 216 24 193 4.67e-39 138
MS.gene61089.t1 MTR_5g058120 45.000 160 82 2 174 332 1 155 3.92e-35 129
MS.gene61089.t1 MTR_3g072210 36.364 187 113 5 153 336 55 238 3.61e-33 123
MS.gene61089.t1 MTR_7g072490 34.426 244 101 5 87 329 2 187 3.33e-30 115
MS.gene61089.t1 MTR_3g072260 41.135 141 74 3 9 149 2 133 4.26e-27 104
MS.gene61089.t1 MTR_2g078560 30.357 224 118 5 147 333 95 317 2.00e-23 99.4
MS.gene61089.t1 MTR_4g114220 51.020 98 35 3 57 152 17 103 8.51e-22 90.5
MS.gene61089.t1 MTR_7g086790 32.461 191 111 5 88 278 17 189 1.08e-21 91.7
MS.gene61089.t1 MTR_3g462850 33.099 142 82 5 207 336 9 149 1.55e-18 81.6
MS.gene61089.t1 MTR_6g048160 54.167 72 28 2 80 151 22 88 5.01e-18 78.6
MS.gene61089.t1 MTR_1g089005 36.975 119 67 2 41 153 15 131 7.47e-18 80.1
MS.gene61089.t1 MTR_7g107500 52.703 74 34 1 263 336 25 97 1.17e-16 75.1
MS.gene61089.t1 MTR_4g012865 45.588 68 37 0 41 108 77 144 6.38e-16 74.7
MS.gene61089.t1 MTR_4g031040 36.752 117 62 2 152 268 25 129 2.29e-14 69.7
MS.gene61089.t1 MTR_7g086810 36.207 116 47 3 45 160 10 98 2.39e-13 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61089.t1 AT1G71695 59.829 351 134 3 11 357 10 357 6.67e-161 455
MS.gene61089.t1 AT2G18150 44.068 295 156 5 45 332 40 332 1.97e-86 265
MS.gene61089.t1 AT4G36430 43.390 295 158 5 45 332 34 326 2.35e-85 261
MS.gene61089.t1 AT2G18140 44.407 295 155 5 45 332 39 331 2.35e-85 262
MS.gene61089.t1 AT5G14130 42.724 323 169 4 19 336 19 330 2.31e-84 259
MS.gene61089.t1 AT5G14130 42.724 323 169 4 19 336 60 371 9.28e-84 259
MS.gene61089.t1 AT5G06730 41.026 351 185 8 1 341 1 339 1.14e-83 258
MS.gene61089.t1 AT5G66390 44.407 295 155 5 45 332 37 329 4.54e-83 256
MS.gene61089.t1 AT1G05260 44.984 309 158 7 36 336 21 325 8.65e-83 255
MS.gene61089.t1 AT4G08780 43.478 322 168 7 41 352 24 341 1.14e-82 255
MS.gene61089.t1 AT3G21770 44.514 319 154 8 25 334 22 326 3.75e-82 253
MS.gene61089.t1 AT4G33420 42.006 319 166 5 14 332 22 321 5.57e-82 253
MS.gene61089.t1 AT4G33420 42.006 319 166 5 14 332 69 368 2.24e-81 253
MS.gene61089.t1 AT1G49570 43.607 305 161 4 37 332 44 346 2.55e-81 252
MS.gene61089.t1 AT3G32980 42.730 337 166 9 24 348 23 344 8.34e-81 251
MS.gene61089.t1 AT4G16270 45.574 305 151 8 41 336 50 348 1.30e-80 250
MS.gene61089.t1 AT4G08770 41.716 338 176 8 25 352 15 341 1.90e-80 249
MS.gene61089.t1 AT5G51890 43.692 325 166 8 20 336 7 322 4.39e-80 248
MS.gene61089.t1 AT3G49120 41.718 326 169 7 24 339 24 338 2.45e-79 247
MS.gene61089.t1 AT3G50990 42.715 302 164 5 38 332 38 337 5.05e-79 246
MS.gene61089.t1 AT4G11290 41.840 337 170 8 9 336 7 326 5.54e-79 245
MS.gene61089.t1 AT5G06720 41.000 300 167 5 41 332 32 329 9.96e-79 244
MS.gene61089.t1 AT1G44970 39.655 348 196 6 1 336 1 346 1.34e-78 245
MS.gene61089.t1 AT5G42180 41.196 301 164 5 38 332 20 313 5.51e-78 242
MS.gene61089.t1 AT5G05340 41.137 299 169 4 41 336 30 324 2.50e-77 241
MS.gene61089.t1 AT5G58400 38.906 329 181 5 7 332 10 321 2.57e-77 241
MS.gene61089.t1 AT2G18980 40.909 308 169 6 37 336 21 323 3.61e-77 240
MS.gene61089.t1 AT2G22420 42.475 299 161 5 45 337 27 320 3.77e-77 240
MS.gene61089.t1 AT5G19890 41.830 306 160 7 41 336 30 327 7.38e-77 239
MS.gene61089.t1 AT1G68850 39.181 342 182 10 10 336 5 335 1.30e-76 239
MS.gene61089.t1 AT5G15180 41.558 308 170 5 35 336 26 329 1.33e-76 239
MS.gene61089.t1 AT3G03670 40.323 310 172 5 35 336 17 321 2.51e-76 238
MS.gene61089.t1 AT1G14550 39.939 328 181 6 11 336 8 321 5.12e-76 237
MS.gene61089.t1 AT5G64120 39.458 332 185 8 12 336 6 328 6.47e-76 237
MS.gene61089.t1 AT2G35380 43.038 316 156 9 36 336 29 335 1.31e-75 237
MS.gene61089.t1 AT2G38390 43.789 322 153 9 28 336 27 333 1.35e-75 237
MS.gene61089.t1 AT4G26010 39.934 303 172 5 35 336 16 309 2.40e-75 235
MS.gene61089.t1 AT1G05240 42.434 304 163 6 41 336 26 325 3.05e-75 235
MS.gene61089.t1 AT1G05250 42.434 304 163 6 41 336 26 325 3.05e-75 235
MS.gene61089.t1 AT4G26010 39.934 303 172 5 35 336 44 337 3.15e-75 236
MS.gene61089.t1 AT3G49110 41.424 309 169 6 41 339 33 339 3.18e-75 236
MS.gene61089.t1 AT4G30170 39.474 304 171 5 41 336 27 325 3.55e-75 235
MS.gene61089.t1 AT3G01190 42.763 304 162 5 39 336 24 321 4.03e-75 235
MS.gene61089.t1 AT5G17820 42.088 297 156 5 41 332 24 309 4.19e-75 234
MS.gene61089.t1 AT5G17820 42.321 293 153 5 45 332 81 362 6.05e-74 233
MS.gene61089.t1 AT4G37530 40.132 304 173 4 41 336 27 329 8.40e-74 232
MS.gene61089.t1 AT2G38380 42.857 322 156 9 28 336 27 333 3.02e-73 231
MS.gene61089.t1 AT1G14540 41.946 298 168 5 41 336 21 315 9.00e-72 226
MS.gene61089.t1 AT5G40150 40.268 298 175 2 41 336 32 328 1.61e-71 226
MS.gene61089.t1 AT4G37520 39.145 304 176 4 41 336 27 329 6.10e-71 224
MS.gene61089.t1 AT4G17690 39.542 306 179 3 34 337 22 323 8.50e-71 224
MS.gene61089.t1 AT5G58390 40.878 296 167 5 41 332 21 312 2.07e-70 223
MS.gene61089.t1 AT5G39580 40.789 304 167 6 39 336 23 319 2.10e-70 223
MS.gene61089.t1 AT2G34060 37.389 337 200 5 8 334 9 344 4.82e-70 223
MS.gene61089.t1 AT1G34510 38.614 303 176 5 35 336 16 309 4.87e-70 221
MS.gene61089.t1 AT5G67400 39.672 305 173 6 41 336 27 329 2.48e-69 220
MS.gene61089.t1 AT4G37520 38.487 304 175 5 41 336 27 326 3.78e-68 217
MS.gene61089.t1 AT3G49960 38.689 305 176 6 41 336 27 329 5.00e-68 217
MS.gene61089.t1 AT3G28200 40.000 300 172 5 41 336 21 316 2.04e-67 215
MS.gene61089.t1 AT2G41480 40.461 304 161 8 45 336 33 328 7.31e-67 214
MS.gene61089.t1 AT5G19880 39.274 303 171 6 41 332 25 325 8.20e-67 214
MS.gene61089.t1 AT2G24800 40.909 308 167 6 38 336 28 329 1.92e-66 213
MS.gene61089.t1 AT4G33870 35.329 334 172 5 41 333 68 398 3.74e-66 214
MS.gene61089.t1 AT5G64110 40.728 302 160 7 45 336 38 330 8.07e-66 211
MS.gene61089.t1 AT4G21960 35.556 315 193 4 28 338 21 329 9.18e-66 211
MS.gene61089.t1 AT5G24070 37.427 342 191 8 10 338 6 337 4.08e-64 207
MS.gene61089.t1 AT2G39040 40.777 309 166 8 41 336 46 350 8.66e-63 204
MS.gene61089.t1 AT4G31760 36.667 330 186 6 15 336 12 326 1.54e-62 203
MS.gene61089.t1 AT5G47000 37.288 295 181 3 41 332 33 326 1.05e-61 201
MS.gene61089.t1 AT1G77100 36.937 333 184 9 10 336 7 319 1.30e-61 200
MS.gene61089.t1 AT5G22410 39.934 303 162 9 41 332 28 321 2.61e-61 200
MS.gene61089.t1 AT5G64100 39.667 300 164 7 45 336 41 331 8.77e-61 198
MS.gene61089.t1 AT4G37530 40.467 257 144 4 41 289 27 282 1.24e-60 196
MS.gene61089.t1 AT3G17070 35.430 302 185 4 39 332 36 335 2.44e-60 197
MS.gene61089.t1 AT2G43480 35.882 340 189 9 13 332 1 331 1.76e-59 195
MS.gene61089.t1 AT1G24110 35.556 315 188 6 32 336 13 322 1.05e-58 193
MS.gene61089.t1 AT1G30870 36.825 315 180 8 36 342 46 349 3.31e-58 192
MS.gene61089.t1 AT2G37130 34.437 302 188 5 41 336 30 327 4.78e-58 191
MS.gene61089.t1 AT2G37130 34.564 298 185 5 45 336 3 296 7.28e-58 190
MS.gene61089.t1 AT4G25980 36.482 307 178 6 41 336 26 326 8.29e-58 191
MS.gene61089.t1 AT2G35380 42.400 250 124 8 102 336 3 247 3.15e-55 181
MS.gene61089.t1 AT3G17070 32.946 258 162 5 83 332 18 272 2.86e-41 146
MS.gene61089.t1 AT5G39580 38.806 201 112 4 39 239 23 212 8.71e-39 138
MS.gene61089.t1 AT4G25980 40.588 170 95 3 41 210 71 234 4.55e-35 130
MS.gene61089.t1 AT2G24800 42.690 171 92 3 38 208 28 192 9.66e-33 122
MS.gene61089.t1 AT3G42570 29.907 107 73 1 102 208 43 147 6.41e-11 60.5

Find 0 sgRNAs with CRISPR-Local

Find 94 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTATATTTGGTTATTTA+TGG - 10709:6315-6334 MS.gene61089:CDS 10.0%
!! AAATCCAAACTTATTATATT+TGG - 10709:6305-6324 MS.gene61089:CDS 15.0%
!! AACTATAAACAATACTAATT+AGG - 10709:6179-6198 MS.gene61089:CDS 15.0%
!! ATAACCAAATATAATAAGTT+TGG + 10709:6312-6331 MS.gene61089:intergenic 15.0%
!!! TATTTGTTATCAAATTTGTT+GGG + 10709:6979-6998 MS.gene61089:intergenic 15.0%
!! AAAATAAAGGTTTACTTACT+AGG + 10709:6552-6571 MS.gene61089:intergenic 20.0%
!! GTATATTTAGCTAATTAGTT+AGG - 10709:6148-6167 MS.gene61089:CDS 20.0%
!! GTTAAAAAAATGAAAATGCA+GGG - 10709:6337-6356 MS.gene61089:CDS 20.0%
!!! GTATTTGTTATCAAATTTGT+TGG + 10709:6980-6999 MS.gene61089:intergenic 20.0%
! AAGATTTATACACTGATAAG+AGG - 10709:7043-7062 MS.gene61089:CDS 25.0%
! GGTTAAAAAAATGAAAATGC+AGG - 10709:6336-6355 MS.gene61089:CDS 25.0%
! TCTTATCAGTGTATAAATCT+TGG + 10709:7044-7063 MS.gene61089:intergenic 25.0%
!!! AAGTTTTTCGATTATCTTGA+AGG + 10709:6449-6468 MS.gene61089:intergenic 25.0%
!!! CAATGTTTTATTGACATATG+TGG - 10709:6245-6264 MS.gene61089:CDS 25.0%
CCAACTTCTCACAAAAATAA+AGG + 10709:6565-6584 MS.gene61089:intergenic 30.0%
GAGAAAATGAAAGAAAGGTA+TGG + 10709:5925-5944 MS.gene61089:intergenic 30.0%
GATGTGAGAAAATGAAAGAA+AGG + 10709:5930-5949 MS.gene61089:intergenic 30.0%
TGAATCTGTTTAGCTAACTT+TGG - 10709:6282-6301 MS.gene61089:CDS 30.0%
! AAGATCTTCAATGATGATGT+TGG - 10709:6061-6080 MS.gene61089:CDS 30.0%
! AAGTAGGACAAGTTTGTTTA+AGG + 10709:6918-6937 MS.gene61089:intergenic 30.0%
! ATAGAAGCTGTACATTTTCA+CGG + 10709:6224-6243 MS.gene61089:intergenic 30.0%
!! AAAGGTATGGATTAGAAGAA+AGG + 10709:5912-5931 MS.gene61089:intergenic 30.0%
!! TTGTGATGGATCAGTATTAT+TGG - 10709:6360-6379 MS.gene61089:CDS 30.0%
!! TTGTTTAAGGTTTTTGCCAT+AGG + 10709:6905-6924 MS.gene61089:intergenic 30.0%
!!! CCTTTATTTTTGTGAGAAGT+TGG - 10709:6562-6581 MS.gene61089:intron 30.0%
ACTACAAAATTCCCTTAGGA+AGG - 10709:6665-6684 MS.gene61089:CDS 35.0%
AGTAATATAGAGAAGCAGTG+TGG - 10709:6472-6491 MS.gene61089:CDS 35.0%
ATACACTGATAAGAGGACTA+AGG - 10709:7050-7069 MS.gene61089:CDS 35.0%
ATTAACATTTGCAACACAGG+AGG - 10709:6696-6715 MS.gene61089:CDS 35.0%
ATTAGCACGAATTTCTCCTT+TGG + 10709:7172-7191 MS.gene61089:intergenic 35.0%
CAAATCTTTCCTTACTTCTG+TGG - 10709:7215-7234 MS.gene61089:CDS 35.0%
CTGATGATAGATTCAAGCTT+AGG + 10709:6028-6047 MS.gene61089:intergenic 35.0%
GATGGATCAGTATTATTGGA+TGG - 10709:6364-6383 MS.gene61089:CDS 35.0%
GTTGCTGCTATGCTTAAAAT+GGG - 10709:7123-7142 MS.gene61089:CDS 35.0%
TGGATTAACATTTGCAACAC+AGG - 10709:6693-6712 MS.gene61089:CDS 35.0%
TGTTGCTGCTATGCTTAAAA+TGG - 10709:7122-7141 MS.gene61089:CDS 35.0%
! ACTACGAATATCTAGAACTG+TGG + 10709:6956-6975 MS.gene61089:intergenic 35.0%
! AGGACATTTTGAATCGTAGA+AGG + 10709:6008-6027 MS.gene61089:intergenic 35.0%
!! ATTGTTGTTGTGTTGCTTGA+TGG + 10709:6745-6764 MS.gene61089:intergenic 35.0%
!! CATGTTTTTACATTGCAGTC+AGG - 10709:6634-6653 MS.gene61089:CDS 35.0%
!!! AATGTTTTGACTGGAACCAA+AGG - 10709:7153-7172 MS.gene61089:CDS 35.0%
!!! TGTAGGGTTAAGGTTTTTTG+TGG + 10709:6782-6801 MS.gene61089:intergenic 35.0%
AAACCTCCTCCTATAGTGAA+GGG - 10709:5971-5990 MS.gene61089:CDS 40.0%
AATCCATCTCTCCTTCCTAA+GGG + 10709:6679-6698 MS.gene61089:intergenic 40.0%
ATCTTTCCTTACTTCTGTGG+TGG - 10709:7218-7237 MS.gene61089:CDS 40.0%
ATGAAAATGCAGGGTTGTGA+TGG - 10709:6346-6365 MS.gene61089:CDS 40.0%
CATGATAGTCCCTTCACTAT+AGG + 10709:5983-6002 MS.gene61089:intergenic 40.0%
CCAGACTACAAAATTCCCTT+AGG - 10709:6661-6680 MS.gene61089:CDS 40.0%
CTACTACATCTGTAGGGTTA+AGG + 10709:6792-6811 MS.gene61089:intergenic 40.0%
CTATAGTGAAGGGACTATCA+TGG - 10709:5981-6000 MS.gene61089:CDS 40.0%
GTTGATCTTATGAACCGTCA+GGG - 10709:7003-7022 MS.gene61089:intron 40.0%
TAATCCATCTCTCCTTCCTA+AGG + 10709:6680-6699 MS.gene61089:intergenic 40.0%
TGTTGATCTTATGAACCGTC+AGG - 10709:7002-7021 MS.gene61089:intron 40.0%
TGTTTGTGAAAGAACTGCAG+TGG + 10709:6846-6865 MS.gene61089:intergenic 40.0%
TTACCTGAACAAAGCAGTCA+TGG + 10709:6117-6136 MS.gene61089:intergenic 40.0%
TTCGATTATCTTGAAGGCCT+CGG + 10709:6443-6462 MS.gene61089:intergenic 40.0%
TTCGTGCTAATTGCTCTGTT+AGG - 10709:7181-7200 MS.gene61089:CDS 40.0%
! AGAGTGCTACTACATCTGTA+GGG + 10709:6798-6817 MS.gene61089:intergenic 40.0%
! CCTAAGGGAATTTTGTAGTC+TGG + 10709:6664-6683 MS.gene61089:intergenic 40.0%
! GTGTTATCAGTGTTGGAAGT+AGG + 10709:6934-6953 MS.gene61089:intergenic 40.0%
! GTTTTTACATTGCAGTCAGG+AGG - 10709:6637-6656 MS.gene61089:CDS 40.0%
!! AACTGTGGTGTTATCAGTGT+TGG + 10709:6941-6960 MS.gene61089:intergenic 40.0%
!! CATAGGTTTTGTCCATGACA+GGG + 10709:6888-6907 MS.gene61089:intergenic 40.0%
!!! GGACAGCTTAATGTTTTGAC+TGG - 10709:7144-7163 MS.gene61089:CDS 40.0%
AAACTTGAGTCTTAGGACCG+AGG - 10709:6423-6442 MS.gene61089:CDS 45.0%
ACAGATGTAGTAGCACTCTC+AGG - 10709:6799-6818 MS.gene61089:intron 45.0%
ATTCCCTTAGGAAGGAGAGA+TGG - 10709:6673-6692 MS.gene61089:CDS 45.0%
CAAACCTCCTCCTATAGTGA+AGG - 10709:5970-5989 MS.gene61089:CDS 45.0%
CAAAGCAGTCATGGAAGTGA+AGG + 10709:6108-6127 MS.gene61089:intergenic 45.0%
CACCACCAAACTTGAGTCTT+AGG - 10709:6416-6435 MS.gene61089:CDS 45.0%
CATCTTCCACCACAGAAGTA+AGG + 10709:7227-7246 MS.gene61089:intergenic 45.0%
CCTGTCATGGACAAAACCTA+TGG - 10709:6886-6905 MS.gene61089:intron 45.0%
CTTCACTATAGGAGGAGGTT+TGG + 10709:5972-5991 MS.gene61089:intergenic 45.0%
GATAGTCCCTTCACTATAGG+AGG + 10709:5980-5999 MS.gene61089:intergenic 45.0%
GTCCTAAGACTCAAGTTTGG+TGG + 10709:6421-6440 MS.gene61089:intergenic 45.0%
TAGGAAAACAGCATCACGAG+CGG + 10709:6533-6552 MS.gene61089:intergenic 45.0%
TCGGTCCTAAGACTCAAGTT+TGG + 10709:6424-6443 MS.gene61089:intergenic 45.0%
! CTTCCATGACTGCTTTGTTC+AGG - 10709:6111-6130 MS.gene61089:CDS 45.0%
! TACTTCTGTGGTGGAAGATG+CGG - 10709:7227-7246 MS.gene61089:CDS 45.0%
!! CCATAGGTTTTGTCCATGAC+AGG + 10709:6889-6908 MS.gene61089:intergenic 45.0%
!! GAGAGTGCTACTACATCTGT+AGG + 10709:6799-6818 MS.gene61089:intergenic 45.0%
!! GTTGTGTTGCTTGATGGTGA+AGG + 10709:6739-6758 MS.gene61089:intergenic 45.0%
!!! CCATGACAGGGTCTTGTTTT+GGG + 10709:6876-6895 MS.gene61089:intergenic 45.0%
!!! TCCATGACAGGGTCTTGTTT+TGG + 10709:6877-6896 MS.gene61089:intergenic 45.0%
AGTCCCTTCACTATAGGAGG+AGG + 10709:5977-5996 MS.gene61089:intergenic 50.0%
CCCAAAACAAGACCCTGTCA+TGG - 10709:6873-6892 MS.gene61089:intron 50.0%
CCGAAGTAAAGAGACCCTGA+CGG + 10709:7020-7039 MS.gene61089:intergenic 50.0%
CCGTCAGGGTCTCTTTACTT+CGG - 10709:7017-7036 MS.gene61089:CDS 50.0%
CTCTCAGGTGGTCACACAAT+AGG - 10709:6814-6833 MS.gene61089:intron 50.0%
GATGATGTTGGTCAAGCTGC+TGG - 10709:6073-6092 MS.gene61089:CDS 50.0%
GATGTAGTAGCACTCTCAGG+TGG - 10709:6802-6821 MS.gene61089:intron 50.0%
GGTGGTGCATCTTTCTCACT+TGG + 10709:6403-6422 MS.gene61089:intergenic 50.0%
AACAGCATCACGAGCGGCAA+TGG + 10709:6527-6546 MS.gene61089:intergenic 55.0%
! TTCTGTGGTGGAAGATGCGG+TGG - 10709:7230-7249 MS.gene61089:CDS 55.0%


Chromosome Type Strat End Strand Name
10709 gene 5875 7272 5875 ID=MS.gene61089
10709 mRNA 5875 7272 5875 ID=MS.gene61089.t1;Parent=MS.gene61089
10709 exon 7015 7272 7015 ID=MS.gene61089.t1.exon1;Parent=MS.gene61089.t1
10709 CDS 7015 7272 7015 ID=cds.MS.gene61089.t1;Parent=MS.gene61089.t1
10709 exon 6595 6789 6595 ID=MS.gene61089.t1.exon2;Parent=MS.gene61089.t1
10709 CDS 6595 6789 6595 ID=cds.MS.gene61089.t1;Parent=MS.gene61089.t1
10709 exon 5875 6495 5875 ID=MS.gene61089.t1.exon3;Parent=MS.gene61089.t1
10709 CDS 5875 6495 5875 ID=cds.MS.gene61089.t1;Parent=MS.gene61089.t1
Gene Sequence

>MS.gene61089

ATGGCTTATGCTTCTTGTAGGAGTGCTTTCTTCACCTTTCTTCTAATCCATACCTTTCTTTCATTTTCTCACATCAAAGTGTCTGAAGCACAAGCCAAACCTCCTCCTATAGTGAAGGGACTATCATGGACCTTCTACGATTCAAAATGTCCTAAGCTTGAATCTATCATCAGAAAAGAGCTCAAGAAGATCTTCAATGATGATGTTGGTCAAGCTGCTGGCTTGCTTCGCCTTCACTTCCATGACTGCTTTGTTCAGGTAAACACAATTAATGTATATTTAGCTAATTAGTTAGGAGCATCTTAACTATAAACAATACTAATTAGGCATTACAATGCTTGTGTTTCCGTGAAAATGTACAGCTTCTATACAATGTTTTATTGACATATGTGGTGATTAAATTAGCATGAATCTGTTTAGCTAACTTTGGAAATCCAAACTTATTATATTTGGTTATTTATGGTTAAAAAAATGAAAATGCAGGGTTGTGATGGATCAGTATTATTGGATGGATCAGCAAGTGAGCCAAGTGAGAAAGATGCACCACCAAACTTGAGTCTTAGGACCGAGGCCTTCAAGATAATCGAAAAACTTCGTAGTAATATAGAGAAGCAGTGTGGAAGAATCGTCTCTTGTGCTGATATCACTGCCATTGCCGCTCGTGATGCTGTTTTCCTAGTAAGTAAACCTTTATTTTTGTGAGAAGTTGGAAAATTAATGTTACTAAAGCTTTTACATTAGTAAATCATTAATCATATACATGTTTTTACATTGCAGTCAGGAGGACCAGACTACAAAATTCCCTTAGGAAGGAGAGATGGATTAACATTTGCAACACAGGAGGTAACATTAGACAATCTTCCTTCACCATCAAGCAACACAACAACAATCTTAAACTCACTTGCCACAAAAAACCTTAACCCTACAGATGTAGTAGCACTCTCAGGTGGTCACACAATAGGCATAAGCCACTGCAGTTCTTTCACAAACAGACTCTACCCAAAACAAGACCCTGTCATGGACAAAACCTATGGCAAAAACCTTAAACAAACTTGTCCTACTTCCAACACTGATAACACCACAGTTCTAGATATTCGTAGTCCCAACAAATTTGATAACAAATACTATGTTGATCTTATGAACCGTCAGGGTCTCTTTACTTCGGACCAAGATTTATACACTGATAAGAGGACTAAGGATATTGTTACTAACTTTGCTGTGAATCAATCTTTGTTCTTTGAGAAATTTGTTGCTGCTATGCTTAAAATGGGACAGCTTAATGTTTTGACTGGAACCAAAGGAGAAATTCGTGCTAATTGCTCTGTTAGGAATAAAAATAGCAAATCTTTCCTTACTTCTGTGGTGGAAGATGCGGTGGAAAGATTTTTAGAAATGTGA
Protein sequence

>MS.gene61089.t1

MAYASCRSAFFTFLLIHTFLSFSHIKVSEAQAKPPPIVKGLSWTFYDSKCPKLESIIRKELKKIFNDDVGQAAGLLRLHFHDCFVQGCDGSVLLDGSASEPSEKDAPPNLSLRTEAFKIIEKLRSNIEKQCGRIVSCADITAIAARDAVFLSGGPDYKIPLGRRDGLTFATQEVTLDNLPSPSSNTTTILNSLATKNLNPTDVVALSGGHTIGISHCSSFTNRLYPKQDPVMDKTYGKNLKQTCPTSNTDNTTVLDIRSPNKFDNKYYVDLMNRQGLFTSDQDLYTDKRTKDIVTNFAVNQSLFFEKFVAAMLKMGQLNVLTGTKGEIRANCSVRNKNSKSFLTSVVEDAVERFLEM