Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88899.t1 | PNX96243.1 | 91.3 | 358 | 30 | 1 | 1 | 357 | 1 | 358 | 3.30E-183 | 651 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88899.t1 | Q96520 | 61.8 | 330 | 123 | 2 | 28 | 357 | 31 | 357 | 9.8e-120 | 431.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88899.t1 | A0A2K3MZL7 | 91.3 | 358 | 30 | 1 | 1 | 357 | 1 | 358 | 2.3e-183 | 651.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88899.t1 | MTR_6g043240 | 56.571 | 350 | 143 | 4 | 8 | 354 | 9 | 352 | 1.00e-143 | 411 |
MS.gene88899.t1 | MTR_6g043280 | 52.819 | 337 | 153 | 5 | 1 | 336 | 1 | 332 | 4.32e-124 | 360 |
MS.gene88899.t1 | MTR_6g043460 | 48.538 | 342 | 165 | 5 | 1 | 340 | 1 | 333 | 6.03e-110 | 325 |
MS.gene88899.t1 | MTR_2g029750 | 45.031 | 322 | 164 | 7 | 41 | 352 | 29 | 347 | 1.81e-86 | 265 |
MS.gene88899.t1 | MTR_5g021060 | 46.441 | 295 | 149 | 5 | 45 | 332 | 34 | 326 | 2.00e-86 | 264 |
MS.gene88899.t1 | MTR_0155s0040 | 43.345 | 293 | 159 | 4 | 40 | 332 | 26 | 311 | 5.34e-86 | 263 |
MS.gene88899.t1 | MTR_2g029815 | 44.444 | 315 | 163 | 6 | 34 | 339 | 22 | 333 | 2.31e-85 | 262 |
MS.gene88899.t1 | MTR_3g092990 | 46.885 | 305 | 149 | 6 | 41 | 336 | 26 | 326 | 5.72e-85 | 260 |
MS.gene88899.t1 | MTR_2g029860 | 41.691 | 343 | 179 | 7 | 19 | 352 | 16 | 346 | 1.13e-84 | 260 |
MS.gene88899.t1 | MTR_1g077000 | 41.781 | 292 | 163 | 4 | 41 | 332 | 39 | 323 | 1.68e-83 | 256 |
MS.gene88899.t1 | MTR_8g076820 | 44.482 | 299 | 157 | 5 | 45 | 336 | 34 | 330 | 2.83e-83 | 256 |
MS.gene88899.t1 | MTR_2g029830 | 42.724 | 323 | 173 | 6 | 41 | 354 | 28 | 347 | 2.74e-82 | 254 |
MS.gene88899.t1 | MTR_1g086320 | 45.603 | 307 | 153 | 7 | 41 | 336 | 30 | 333 | 3.23e-82 | 253 |
MS.gene88899.t1 | MTR_8g075100 | 44.884 | 303 | 151 | 6 | 41 | 336 | 26 | 319 | 4.23e-82 | 253 |
MS.gene88899.t1 | MTR_2g028980 | 42.398 | 342 | 172 | 8 | 12 | 339 | 3 | 333 | 4.61e-82 | 254 |
MS.gene88899.t1 | MTR_2g029560 | 42.812 | 320 | 171 | 6 | 41 | 351 | 24 | 340 | 6.05e-82 | 253 |
MS.gene88899.t1 | MTR_2g029820 | 44.156 | 308 | 160 | 6 | 41 | 339 | 29 | 333 | 9.92e-82 | 253 |
MS.gene88899.t1 | MTR_7g093370 | 41.945 | 329 | 171 | 7 | 13 | 332 | 50 | 367 | 2.91e-81 | 252 |
MS.gene88899.t1 | MTR_2g088770 | 44.918 | 305 | 154 | 7 | 41 | 336 | 26 | 325 | 5.68e-81 | 250 |
MS.gene88899.t1 | MTR_2g040000 | 41.399 | 343 | 175 | 9 | 5 | 336 | 4 | 331 | 1.43e-80 | 249 |
MS.gene88899.t1 | MTR_2g029740 | 42.857 | 315 | 168 | 6 | 45 | 350 | 33 | 344 | 1.54e-80 | 250 |
MS.gene88899.t1 | MTR_1g022970 | 44.186 | 301 | 158 | 5 | 40 | 332 | 45 | 343 | 2.51e-80 | 249 |
MS.gene88899.t1 | MTR_4g125940 | 41.813 | 342 | 173 | 8 | 5 | 336 | 4 | 329 | 3.36e-80 | 248 |
MS.gene88899.t1 | MTR_4g029170 | 39.938 | 323 | 186 | 6 | 17 | 336 | 4 | 321 | 6.47e-80 | 247 |
MS.gene88899.t1 | MTR_2g029730 | 43.260 | 319 | 171 | 5 | 41 | 351 | 25 | 341 | 8.00e-80 | 248 |
MS.gene88899.t1 | MTR_2g029800 | 42.532 | 308 | 165 | 6 | 41 | 339 | 29 | 333 | 8.11e-80 | 248 |
MS.gene88899.t1 | MTR_1g086490 | 44.586 | 314 | 153 | 7 | 41 | 336 | 30 | 340 | 1.73e-79 | 247 |
MS.gene88899.t1 | MTR_4g095450 | 42.424 | 297 | 167 | 3 | 41 | 334 | 27 | 322 | 4.77e-79 | 245 |
MS.gene88899.t1 | MTR_2g084110 | 41.980 | 293 | 165 | 4 | 45 | 336 | 29 | 317 | 4.82e-79 | 245 |
MS.gene88899.t1 | MTR_5g022870 | 42.525 | 301 | 157 | 7 | 39 | 332 | 21 | 312 | 5.50e-79 | 244 |
MS.gene88899.t1 | MTR_7g029030 | 42.953 | 298 | 166 | 4 | 41 | 336 | 25 | 320 | 5.89e-79 | 245 |
MS.gene88899.t1 | MTR_1g101830 | 41.231 | 325 | 168 | 7 | 19 | 336 | 14 | 322 | 1.44e-78 | 244 |
MS.gene88899.t1 | MTR_1g038680 | 43.377 | 302 | 159 | 7 | 45 | 336 | 33 | 332 | 4.64e-78 | 243 |
MS.gene88899.t1 | MTR_4g083710 | 42.193 | 301 | 166 | 5 | 41 | 336 | 27 | 324 | 5.66e-78 | 242 |
MS.gene88899.t1 | MTR_2g084080 | 41.297 | 293 | 167 | 4 | 45 | 336 | 29 | 317 | 6.82e-78 | 242 |
MS.gene88899.t1 | MTR_7g086820 | 42.484 | 306 | 167 | 4 | 35 | 337 | 14 | 313 | 6.99e-78 | 242 |
MS.gene88899.t1 | MTR_1g054205 | 41.391 | 302 | 164 | 7 | 41 | 332 | 24 | 322 | 1.47e-77 | 241 |
MS.gene88899.t1 | MTR_3g466200 | 41.250 | 320 | 173 | 4 | 16 | 332 | 9 | 316 | 1.78e-77 | 241 |
MS.gene88899.t1 | MTR_5g017850 | 41.748 | 309 | 170 | 5 | 35 | 336 | 21 | 326 | 4.49e-77 | 240 |
MS.gene88899.t1 | MTR_2g008710 | 43.506 | 308 | 157 | 6 | 39 | 336 | 25 | 325 | 4.75e-77 | 240 |
MS.gene88899.t1 | MTR_3g072190 | 40.000 | 325 | 182 | 6 | 9 | 332 | 2 | 314 | 7.84e-77 | 239 |
MS.gene88899.t1 | MTR_7g086870 | 40.878 | 296 | 169 | 3 | 41 | 336 | 22 | 311 | 7.92e-77 | 239 |
MS.gene88899.t1 | MTR_7g072510 | 41.946 | 298 | 166 | 5 | 41 | 336 | 20 | 312 | 7.92e-77 | 239 |
MS.gene88899.t1 | MTR_4g046713 | 42.475 | 299 | 162 | 5 | 45 | 336 | 31 | 326 | 9.26e-77 | 239 |
MS.gene88899.t1 | MTR_5g017860 | 42.581 | 310 | 166 | 5 | 35 | 336 | 21 | 326 | 9.37e-77 | 239 |
MS.gene88899.t1 | MTR_7g107520 | 41.515 | 330 | 173 | 7 | 13 | 336 | 5 | 320 | 1.26e-76 | 239 |
MS.gene88899.t1 | MTR_1g025980 | 40.984 | 305 | 165 | 7 | 37 | 334 | 20 | 316 | 2.84e-76 | 238 |
MS.gene88899.t1 | MTR_2g029850 | 42.368 | 321 | 172 | 7 | 41 | 352 | 29 | 345 | 3.07e-76 | 239 |
MS.gene88899.t1 | MTR_2g084020 | 41.837 | 294 | 165 | 5 | 45 | 336 | 29 | 318 | 5.91e-76 | 237 |
MS.gene88899.t1 | MTR_5g074970 | 41.860 | 301 | 166 | 4 | 41 | 336 | 30 | 326 | 8.30e-76 | 237 |
MS.gene88899.t1 | MTR_5g014100 | 42.997 | 307 | 155 | 9 | 45 | 336 | 30 | 331 | 9.94e-76 | 237 |
MS.gene88899.t1 | MTR_5g016010 | 40.909 | 308 | 171 | 5 | 36 | 334 | 22 | 327 | 1.11e-75 | 236 |
MS.gene88899.t1 | MTR_7g072480 | 42.006 | 319 | 169 | 6 | 16 | 332 | 8 | 312 | 1.32e-75 | 236 |
MS.gene88899.t1 | MTR_5g049280 | 36.873 | 339 | 195 | 8 | 10 | 336 | 6 | 337 | 2.48e-75 | 236 |
MS.gene88899.t1 | MTR_2g084010 | 41.497 | 294 | 166 | 5 | 45 | 336 | 29 | 318 | 7.25e-75 | 234 |
MS.gene88899.t1 | MTR_4g029200 | 43.279 | 305 | 166 | 5 | 34 | 336 | 39 | 338 | 7.45e-75 | 235 |
MS.gene88899.t1 | MTR_4g074990 | 39.412 | 340 | 167 | 7 | 1 | 336 | 1 | 305 | 7.85e-75 | 234 |
MS.gene88899.t1 | MTR_3g094650 | 40.678 | 295 | 168 | 4 | 41 | 332 | 28 | 318 | 8.09e-75 | 234 |
MS.gene88899.t1 | MTR_5g074760 | 41.234 | 308 | 172 | 6 | 36 | 338 | 20 | 323 | 1.39e-74 | 234 |
MS.gene88899.t1 | MTR_4g074995 | 40.864 | 301 | 157 | 5 | 41 | 336 | 24 | 308 | 6.77e-74 | 231 |
MS.gene88899.t1 | MTR_4g029180 | 40.136 | 294 | 171 | 4 | 45 | 336 | 31 | 321 | 8.44e-74 | 231 |
MS.gene88899.t1 | MTR_4g127670 | 41.118 | 304 | 167 | 6 | 41 | 336 | 24 | 323 | 1.62e-73 | 231 |
MS.gene88899.t1 | MTR_2g084000 | 38.602 | 329 | 184 | 7 | 10 | 336 | 7 | 319 | 1.75e-73 | 231 |
MS.gene88899.t1 | MTR_2g084090 | 40.136 | 294 | 170 | 4 | 45 | 336 | 29 | 318 | 3.31e-73 | 230 |
MS.gene88899.t1 | MTR_6g027440 | 39.016 | 305 | 178 | 3 | 35 | 336 | 15 | 314 | 6.38e-73 | 229 |
MS.gene88899.t1 | MTR_4g030890 | 42.953 | 298 | 159 | 5 | 45 | 336 | 104 | 396 | 6.50e-73 | 232 |
MS.gene88899.t1 | MTR_3g092990 | 44.590 | 305 | 145 | 7 | 41 | 336 | 26 | 315 | 8.33e-73 | 229 |
MS.gene88899.t1 | MTR_5g083860 | 40.339 | 295 | 169 | 4 | 41 | 332 | 31 | 321 | 9.58e-73 | 229 |
MS.gene88899.t1 | MTR_2g029910 | 40.379 | 317 | 176 | 6 | 45 | 352 | 34 | 346 | 2.76e-72 | 229 |
MS.gene88899.t1 | MTR_4g114210 | 42.951 | 305 | 154 | 8 | 41 | 333 | 21 | 317 | 2.58e-71 | 225 |
MS.gene88899.t1 | MTR_4g122640 | 38.024 | 334 | 198 | 6 | 9 | 336 | 6 | 336 | 9.57e-71 | 224 |
MS.gene88899.t1 | MTR_4g125940 | 44.565 | 276 | 139 | 6 | 71 | 336 | 3 | 274 | 1.03e-70 | 222 |
MS.gene88899.t1 | MTR_2g437770 | 40.397 | 302 | 164 | 7 | 41 | 336 | 50 | 341 | 1.28e-70 | 224 |
MS.gene88899.t1 | MTR_4g132490 | 39.739 | 307 | 174 | 6 | 38 | 336 | 24 | 327 | 1.29e-70 | 224 |
MS.gene88899.t1 | MTR_5g074740 | 40.391 | 307 | 174 | 6 | 36 | 337 | 20 | 322 | 1.86e-70 | 223 |
MS.gene88899.t1 | MTR_4g031140 | 40.604 | 298 | 166 | 5 | 45 | 336 | 32 | 324 | 4.36e-70 | 223 |
MS.gene88899.t1 | MTR_1g009750 | 39.344 | 305 | 173 | 6 | 41 | 336 | 27 | 328 | 6.46e-70 | 222 |
MS.gene88899.t1 | MTR_4g087965 | 38.806 | 335 | 193 | 6 | 11 | 334 | 11 | 344 | 6.64e-70 | 222 |
MS.gene88899.t1 | MTR_3g094670 | 40.000 | 295 | 170 | 4 | 41 | 332 | 28 | 318 | 1.41e-69 | 221 |
MS.gene88899.t1 | MTR_5g074860 | 40.268 | 298 | 167 | 8 | 41 | 332 | 29 | 321 | 4.07e-69 | 219 |
MS.gene88899.t1 | MTR_7g026990 | 40.273 | 293 | 169 | 4 | 45 | 336 | 35 | 322 | 7.48e-69 | 219 |
MS.gene88899.t1 | MTR_1g090760 | 38.361 | 305 | 179 | 4 | 41 | 337 | 28 | 331 | 8.77e-69 | 219 |
MS.gene88899.t1 | MTR_5g074710 | 38.961 | 308 | 177 | 7 | 36 | 337 | 20 | 322 | 2.39e-68 | 218 |
MS.gene88899.t1 | MTR_4g074980 | 40.203 | 296 | 151 | 6 | 41 | 336 | 25 | 294 | 7.87e-67 | 213 |
MS.gene88899.t1 | MTR_2g029830 | 41.727 | 278 | 150 | 6 | 86 | 354 | 5 | 279 | 1.06e-65 | 209 |
MS.gene88899.t1 | MTR_3g094630 | 39.661 | 295 | 171 | 4 | 41 | 332 | 28 | 318 | 1.24e-65 | 211 |
MS.gene88899.t1 | MTR_4g029190 | 42.612 | 291 | 158 | 6 | 50 | 336 | 55 | 340 | 2.31e-65 | 211 |
MS.gene88899.t1 | MTR_3g466180 | 40.816 | 294 | 167 | 5 | 41 | 332 | 31 | 319 | 4.65e-65 | 209 |
MS.gene88899.t1 | MTR_1g066710 | 35.855 | 304 | 184 | 4 | 41 | 338 | 27 | 325 | 6.88e-65 | 209 |
MS.gene88899.t1 | MTR_4g133800 | 38.591 | 298 | 168 | 6 | 46 | 337 | 46 | 334 | 1.13e-64 | 208 |
MS.gene88899.t1 | MTR_8g062780 | 37.097 | 310 | 184 | 5 | 36 | 336 | 17 | 324 | 1.62e-64 | 208 |
MS.gene88899.t1 | MTR_3g467600 | 38.138 | 333 | 183 | 11 | 10 | 336 | 9 | 324 | 2.70e-64 | 207 |
MS.gene88899.t1 | MTR_4g074980 | 44.828 | 232 | 121 | 4 | 41 | 268 | 25 | 253 | 7.78e-64 | 204 |
MS.gene88899.t1 | MTR_1g115900 | 39.535 | 301 | 171 | 7 | 41 | 336 | 27 | 321 | 3.95e-63 | 204 |
MS.gene88899.t1 | MTR_1g066380 | 34.098 | 305 | 194 | 3 | 38 | 338 | 24 | 325 | 3.88e-62 | 202 |
MS.gene88899.t1 | MTR_4g132110 | 34.653 | 303 | 191 | 3 | 40 | 338 | 31 | 330 | 4.91e-62 | 202 |
MS.gene88899.t1 | MTR_2g099175 | 36.919 | 344 | 194 | 8 | 7 | 337 | 3 | 336 | 1.48e-61 | 201 |
MS.gene88899.t1 | MTR_1g066640 | 34.106 | 302 | 192 | 3 | 41 | 338 | 27 | 325 | 2.82e-60 | 197 |
MS.gene88899.t1 | MTR_4g132110 | 34.091 | 308 | 191 | 4 | 40 | 338 | 31 | 335 | 5.64e-60 | 196 |
MS.gene88899.t1 | MTR_1g009750 | 36.634 | 303 | 167 | 7 | 41 | 336 | 27 | 311 | 3.83e-59 | 193 |
MS.gene88899.t1 | MTR_3g072190 | 38.800 | 250 | 148 | 4 | 84 | 332 | 2 | 247 | 5.41e-59 | 191 |
MS.gene88899.t1 | MTR_0286s0010 | 36.913 | 298 | 181 | 4 | 41 | 332 | 34 | 330 | 8.88e-59 | 193 |
MS.gene88899.t1 | MTR_6g008075 | 36.913 | 298 | 181 | 4 | 41 | 332 | 34 | 330 | 8.88e-59 | 193 |
MS.gene88899.t1 | MTR_2g067440 | 34.347 | 329 | 176 | 7 | 41 | 333 | 60 | 384 | 2.93e-58 | 194 |
MS.gene88899.t1 | MTR_3g105790 | 36.688 | 308 | 181 | 5 | 37 | 336 | 21 | 322 | 9.69e-58 | 190 |
MS.gene88899.t1 | MTR_1g098320 | 90.099 | 101 | 6 | 1 | 257 | 357 | 45 | 141 | 1.65e-57 | 183 |
MS.gene88899.t1 | MTR_2g008160 | 36.275 | 306 | 179 | 7 | 41 | 336 | 24 | 323 | 2.34e-57 | 189 |
MS.gene88899.t1 | MTR_1g066680 | 33.663 | 303 | 191 | 5 | 41 | 338 | 27 | 324 | 3.24e-55 | 184 |
MS.gene88899.t1 | MTR_2g077990 | 33.837 | 331 | 178 | 7 | 41 | 333 | 76 | 403 | 3.90e-55 | 186 |
MS.gene88899.t1 | MTR_2g078610 | 33.837 | 331 | 178 | 7 | 41 | 333 | 76 | 403 | 5.14e-55 | 186 |
MS.gene88899.t1 | MTR_2g008730 | 36.688 | 308 | 154 | 6 | 39 | 336 | 25 | 301 | 9.40e-54 | 179 |
MS.gene88899.t1 | MTR_5g033470 | 34.641 | 306 | 189 | 5 | 41 | 336 | 73 | 377 | 5.33e-51 | 174 |
MS.gene88899.t1 | MTR_2g078280 | 33.750 | 320 | 171 | 7 | 41 | 322 | 76 | 392 | 2.37e-50 | 173 |
MS.gene88899.t1 | MTR_1g066380 | 34.496 | 258 | 162 | 3 | 85 | 338 | 3 | 257 | 2.39e-49 | 166 |
MS.gene88899.t1 | MTR_2g067450 | 33.876 | 307 | 179 | 9 | 41 | 333 | 11 | 307 | 3.41e-47 | 162 |
MS.gene88899.t1 | MTR_5g074860 | 33.893 | 298 | 147 | 8 | 41 | 332 | 29 | 282 | 4.27e-47 | 161 |
MS.gene88899.t1 | MTR_2g008160 | 33.444 | 302 | 158 | 7 | 41 | 336 | 24 | 288 | 3.21e-46 | 159 |
MS.gene88899.t1 | MTR_5g074700 | 39.381 | 226 | 119 | 6 | 115 | 337 | 5 | 215 | 1.07e-44 | 153 |
MS.gene88899.t1 | MTR_0147s0010 | 30.938 | 320 | 177 | 7 | 41 | 333 | 77 | 379 | 5.21e-44 | 156 |
MS.gene88899.t1 | MTR_2g029880 | 42.233 | 206 | 100 | 6 | 154 | 352 | 9 | 202 | 3.78e-42 | 146 |
MS.gene88899.t1 | MTR_3g105790 | 36.111 | 252 | 147 | 5 | 93 | 336 | 1 | 246 | 3.47e-40 | 142 |
MS.gene88899.t1 | MTR_2g008160 | 39.205 | 176 | 101 | 3 | 41 | 216 | 24 | 193 | 4.39e-39 | 138 |
MS.gene88899.t1 | MTR_5g058120 | 44.375 | 160 | 83 | 2 | 174 | 332 | 1 | 155 | 2.20e-34 | 127 |
MS.gene88899.t1 | MTR_3g072210 | 36.364 | 187 | 113 | 5 | 153 | 336 | 55 | 238 | 2.33e-33 | 124 |
MS.gene88899.t1 | MTR_7g072490 | 34.016 | 244 | 102 | 5 | 87 | 329 | 2 | 187 | 2.35e-29 | 112 |
MS.gene88899.t1 | MTR_3g072260 | 41.135 | 141 | 74 | 3 | 9 | 149 | 2 | 133 | 4.21e-27 | 104 |
MS.gene88899.t1 | MTR_2g078560 | 29.911 | 224 | 119 | 5 | 147 | 333 | 95 | 317 | 1.18e-22 | 97.4 |
MS.gene88899.t1 | MTR_7g086790 | 32.461 | 191 | 111 | 5 | 88 | 278 | 17 | 189 | 4.22e-22 | 92.8 |
MS.gene88899.t1 | MTR_4g114220 | 51.020 | 98 | 35 | 3 | 57 | 152 | 17 | 103 | 8.43e-22 | 90.5 |
MS.gene88899.t1 | MTR_6g048160 | 54.167 | 72 | 28 | 2 | 80 | 151 | 22 | 88 | 5.27e-18 | 78.6 |
MS.gene88899.t1 | MTR_1g089005 | 36.975 | 119 | 67 | 2 | 41 | 153 | 15 | 131 | 7.54e-18 | 80.1 |
MS.gene88899.t1 | MTR_3g462850 | 32.394 | 142 | 83 | 5 | 207 | 336 | 9 | 149 | 9.18e-18 | 79.7 |
MS.gene88899.t1 | MTR_4g012865 | 45.588 | 68 | 37 | 0 | 41 | 108 | 77 | 144 | 6.31e-16 | 74.7 |
MS.gene88899.t1 | MTR_7g107500 | 51.351 | 74 | 35 | 1 | 263 | 336 | 25 | 97 | 8.10e-16 | 72.8 |
MS.gene88899.t1 | MTR_4g031040 | 36.752 | 117 | 62 | 2 | 152 | 268 | 25 | 129 | 2.31e-14 | 69.7 |
MS.gene88899.t1 | MTR_7g086810 | 36.207 | 116 | 47 | 3 | 45 | 160 | 10 | 98 | 2.41e-13 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene88899.t1 | AT1G71695 | 59.544 | 351 | 135 | 3 | 11 | 357 | 10 | 357 | 5.04e-160 | 452 |
MS.gene88899.t1 | AT2G18150 | 43.729 | 295 | 157 | 5 | 45 | 332 | 40 | 332 | 1.44e-85 | 262 |
MS.gene88899.t1 | AT4G36430 | 43.051 | 295 | 159 | 5 | 45 | 332 | 34 | 326 | 1.46e-84 | 259 |
MS.gene88899.t1 | AT2G18140 | 44.068 | 295 | 156 | 5 | 45 | 332 | 39 | 331 | 1.67e-84 | 259 |
MS.gene88899.t1 | AT5G14130 | 42.415 | 323 | 170 | 4 | 19 | 336 | 19 | 330 | 2.04e-83 | 256 |
MS.gene88899.t1 | AT5G06730 | 40.741 | 351 | 186 | 8 | 1 | 341 | 1 | 339 | 6.21e-83 | 256 |
MS.gene88899.t1 | AT5G14130 | 42.415 | 323 | 170 | 4 | 19 | 336 | 60 | 371 | 6.93e-83 | 256 |
MS.gene88899.t1 | AT5G66390 | 44.068 | 295 | 156 | 5 | 45 | 332 | 37 | 329 | 2.74e-82 | 254 |
MS.gene88899.t1 | AT1G05260 | 44.660 | 309 | 159 | 7 | 36 | 336 | 21 | 325 | 5.75e-82 | 253 |
MS.gene88899.t1 | AT4G08780 | 43.168 | 322 | 169 | 7 | 41 | 352 | 24 | 341 | 7.11e-82 | 253 |
MS.gene88899.t1 | AT3G21770 | 44.201 | 319 | 155 | 8 | 25 | 334 | 22 | 326 | 3.20e-81 | 251 |
MS.gene88899.t1 | AT4G33420 | 41.693 | 319 | 167 | 5 | 14 | 332 | 22 | 321 | 4.26e-81 | 250 |
MS.gene88899.t1 | AT4G33420 | 41.693 | 319 | 167 | 5 | 14 | 332 | 69 | 368 | 1.56e-80 | 251 |
MS.gene88899.t1 | AT1G49570 | 43.279 | 305 | 162 | 4 | 37 | 332 | 44 | 346 | 1.84e-80 | 249 |
MS.gene88899.t1 | AT3G32980 | 42.433 | 337 | 167 | 9 | 24 | 348 | 23 | 344 | 7.08e-80 | 248 |
MS.gene88899.t1 | AT4G16270 | 45.246 | 305 | 152 | 8 | 41 | 336 | 50 | 348 | 8.32e-80 | 248 |
MS.gene88899.t1 | AT4G08770 | 41.420 | 338 | 177 | 8 | 25 | 352 | 15 | 341 | 1.56e-79 | 247 |
MS.gene88899.t1 | AT5G51890 | 44.013 | 309 | 158 | 7 | 36 | 336 | 21 | 322 | 3.66e-79 | 245 |
MS.gene88899.t1 | AT1G44970 | 39.368 | 348 | 197 | 6 | 1 | 336 | 1 | 346 | 1.09e-78 | 245 |
MS.gene88899.t1 | AT3G49120 | 41.411 | 326 | 170 | 7 | 24 | 339 | 24 | 338 | 1.58e-78 | 245 |
MS.gene88899.t1 | AT4G11290 | 41.543 | 337 | 171 | 8 | 9 | 336 | 7 | 326 | 3.02e-78 | 243 |
MS.gene88899.t1 | AT5G42180 | 41.196 | 301 | 164 | 5 | 38 | 332 | 20 | 313 | 3.54e-78 | 243 |
MS.gene88899.t1 | AT3G50990 | 42.384 | 302 | 165 | 5 | 38 | 332 | 38 | 337 | 4.02e-78 | 243 |
MS.gene88899.t1 | AT5G06720 | 40.667 | 300 | 168 | 5 | 41 | 332 | 32 | 329 | 6.89e-78 | 243 |
MS.gene88899.t1 | AT5G05340 | 40.803 | 299 | 170 | 4 | 41 | 336 | 30 | 324 | 1.64e-76 | 239 |
MS.gene88899.t1 | AT5G58400 | 38.602 | 329 | 182 | 5 | 7 | 332 | 10 | 321 | 2.28e-76 | 238 |
MS.gene88899.t1 | AT2G18980 | 41.118 | 304 | 166 | 6 | 41 | 336 | 25 | 323 | 2.58e-76 | 238 |
MS.gene88899.t1 | AT2G22420 | 42.140 | 299 | 162 | 5 | 45 | 337 | 27 | 320 | 2.93e-76 | 238 |
MS.gene88899.t1 | AT5G19890 | 41.503 | 306 | 161 | 7 | 41 | 336 | 30 | 327 | 5.62e-76 | 238 |
MS.gene88899.t1 | AT5G15180 | 41.234 | 308 | 171 | 5 | 35 | 336 | 26 | 329 | 5.79e-76 | 238 |
MS.gene88899.t1 | AT1G68850 | 38.889 | 342 | 183 | 10 | 10 | 336 | 5 | 335 | 1.10e-75 | 237 |
MS.gene88899.t1 | AT3G03670 | 40.000 | 310 | 173 | 5 | 35 | 336 | 17 | 321 | 1.83e-75 | 236 |
MS.gene88899.t1 | AT5G64120 | 39.157 | 332 | 186 | 8 | 12 | 336 | 6 | 328 | 2.84e-75 | 236 |
MS.gene88899.t1 | AT1G14550 | 39.634 | 328 | 182 | 6 | 11 | 336 | 8 | 321 | 4.03e-75 | 235 |
MS.gene88899.t1 | AT2G38390 | 43.478 | 322 | 154 | 9 | 28 | 336 | 27 | 333 | 6.72e-75 | 235 |
MS.gene88899.t1 | AT2G35380 | 42.722 | 316 | 157 | 9 | 36 | 336 | 29 | 335 | 9.95e-75 | 234 |
MS.gene88899.t1 | AT4G26010 | 39.604 | 303 | 173 | 5 | 35 | 336 | 16 | 309 | 1.70e-74 | 233 |
MS.gene88899.t1 | AT3G49110 | 41.100 | 309 | 170 | 6 | 41 | 339 | 33 | 339 | 1.86e-74 | 234 |
MS.gene88899.t1 | AT1G05240 | 42.105 | 304 | 164 | 6 | 41 | 336 | 26 | 325 | 1.91e-74 | 233 |
MS.gene88899.t1 | AT1G05250 | 42.105 | 304 | 164 | 6 | 41 | 336 | 26 | 325 | 1.91e-74 | 233 |
MS.gene88899.t1 | AT4G26010 | 39.604 | 303 | 173 | 5 | 35 | 336 | 44 | 337 | 2.25e-74 | 234 |
MS.gene88899.t1 | AT4G30170 | 39.145 | 304 | 172 | 5 | 41 | 336 | 27 | 325 | 2.25e-74 | 233 |
MS.gene88899.t1 | AT3G01190 | 42.434 | 304 | 163 | 5 | 39 | 336 | 24 | 321 | 2.29e-74 | 233 |
MS.gene88899.t1 | AT5G17820 | 41.751 | 297 | 157 | 5 | 41 | 332 | 24 | 309 | 2.63e-74 | 233 |
MS.gene88899.t1 | AT5G17820 | 41.980 | 293 | 154 | 5 | 45 | 332 | 81 | 362 | 3.89e-73 | 231 |
MS.gene88899.t1 | AT4G37530 | 39.803 | 304 | 174 | 4 | 41 | 336 | 27 | 329 | 6.05e-73 | 229 |
MS.gene88899.t1 | AT2G38380 | 42.547 | 322 | 157 | 9 | 28 | 336 | 27 | 333 | 1.87e-72 | 229 |
MS.gene88899.t1 | AT1G14540 | 41.611 | 298 | 169 | 5 | 41 | 336 | 21 | 315 | 7.53e-71 | 224 |
MS.gene88899.t1 | AT5G40150 | 39.933 | 298 | 176 | 2 | 41 | 336 | 32 | 328 | 1.13e-70 | 224 |
MS.gene88899.t1 | AT1G34510 | 38.944 | 303 | 175 | 5 | 35 | 336 | 16 | 309 | 1.23e-70 | 223 |
MS.gene88899.t1 | AT4G37520 | 38.816 | 304 | 177 | 4 | 41 | 336 | 27 | 329 | 3.98e-70 | 223 |
MS.gene88899.t1 | AT4G17690 | 39.216 | 306 | 180 | 3 | 34 | 337 | 22 | 323 | 6.52e-70 | 222 |
MS.gene88899.t1 | AT5G58390 | 40.541 | 296 | 168 | 5 | 41 | 332 | 21 | 312 | 1.37e-69 | 221 |
MS.gene88899.t1 | AT5G39580 | 40.461 | 304 | 168 | 6 | 39 | 336 | 23 | 319 | 1.40e-69 | 221 |
MS.gene88899.t1 | AT2G34060 | 37.092 | 337 | 201 | 5 | 8 | 334 | 9 | 344 | 2.85e-69 | 221 |
MS.gene88899.t1 | AT5G67400 | 39.344 | 305 | 174 | 6 | 41 | 336 | 27 | 329 | 2.16e-68 | 218 |
MS.gene88899.t1 | AT2G41480 | 40.789 | 304 | 160 | 8 | 45 | 336 | 33 | 328 | 1.32e-67 | 216 |
MS.gene88899.t1 | AT4G37520 | 38.158 | 304 | 176 | 5 | 41 | 336 | 27 | 326 | 1.82e-67 | 216 |
MS.gene88899.t1 | AT3G49960 | 38.361 | 305 | 177 | 6 | 41 | 336 | 27 | 329 | 4.44e-67 | 214 |
MS.gene88899.t1 | AT3G28200 | 39.667 | 300 | 173 | 5 | 41 | 336 | 21 | 316 | 1.65e-66 | 213 |
MS.gene88899.t1 | AT5G19880 | 38.944 | 303 | 172 | 6 | 41 | 332 | 25 | 325 | 5.27e-66 | 212 |
MS.gene88899.t1 | AT2G24800 | 40.584 | 308 | 168 | 6 | 38 | 336 | 28 | 329 | 1.29e-65 | 211 |
MS.gene88899.t1 | AT4G33870 | 35.030 | 334 | 173 | 5 | 41 | 333 | 68 | 398 | 3.28e-65 | 212 |
MS.gene88899.t1 | AT5G64110 | 40.397 | 302 | 161 | 7 | 45 | 336 | 38 | 330 | 5.77e-65 | 209 |
MS.gene88899.t1 | AT4G21960 | 35.238 | 315 | 194 | 4 | 28 | 338 | 21 | 329 | 6.35e-65 | 209 |
MS.gene88899.t1 | AT5G24070 | 37.719 | 342 | 190 | 8 | 10 | 338 | 6 | 337 | 8.52e-65 | 209 |
MS.gene88899.t1 | AT2G39040 | 40.453 | 309 | 167 | 8 | 41 | 336 | 46 | 350 | 4.96e-62 | 202 |
MS.gene88899.t1 | AT4G31760 | 36.364 | 330 | 187 | 6 | 15 | 336 | 12 | 326 | 1.26e-61 | 200 |
MS.gene88899.t1 | AT5G64100 | 39.667 | 300 | 164 | 7 | 45 | 336 | 41 | 331 | 2.42e-61 | 200 |
MS.gene88899.t1 | AT5G47000 | 36.949 | 295 | 182 | 3 | 41 | 332 | 33 | 326 | 6.34e-61 | 199 |
MS.gene88899.t1 | AT1G77100 | 36.637 | 333 | 185 | 9 | 10 | 336 | 7 | 319 | 9.03e-61 | 198 |
MS.gene88899.t1 | AT5G22410 | 39.604 | 303 | 163 | 9 | 41 | 332 | 28 | 321 | 2.02e-60 | 197 |
MS.gene88899.t1 | AT4G37530 | 40.078 | 257 | 145 | 4 | 41 | 289 | 27 | 282 | 8.61e-60 | 194 |
MS.gene88899.t1 | AT2G43480 | 35.882 | 340 | 189 | 9 | 13 | 332 | 1 | 331 | 9.79e-60 | 196 |
MS.gene88899.t1 | AT3G17070 | 35.099 | 302 | 186 | 4 | 39 | 332 | 36 | 335 | 1.97e-59 | 195 |
MS.gene88899.t1 | AT4G25980 | 36.808 | 307 | 177 | 6 | 41 | 336 | 26 | 326 | 2.25e-58 | 192 |
MS.gene88899.t1 | AT1G24110 | 35.238 | 315 | 189 | 6 | 32 | 336 | 13 | 322 | 7.61e-58 | 191 |
MS.gene88899.t1 | AT1G30870 | 36.508 | 315 | 181 | 8 | 36 | 342 | 46 | 349 | 2.83e-57 | 190 |
MS.gene88899.t1 | AT2G37130 | 34.106 | 302 | 189 | 5 | 41 | 336 | 30 | 327 | 3.39e-57 | 189 |
MS.gene88899.t1 | AT2G37130 | 34.228 | 298 | 186 | 5 | 45 | 336 | 3 | 296 | 5.95e-57 | 187 |
MS.gene88899.t1 | AT2G35380 | 42.000 | 250 | 125 | 8 | 102 | 336 | 3 | 247 | 2.11e-54 | 179 |
MS.gene88899.t1 | AT3G17070 | 32.558 | 258 | 163 | 5 | 83 | 332 | 18 | 272 | 2.85e-40 | 143 |
MS.gene88899.t1 | AT5G39580 | 38.806 | 201 | 112 | 4 | 39 | 239 | 23 | 212 | 9.78e-39 | 138 |
MS.gene88899.t1 | AT4G25980 | 40.588 | 170 | 95 | 3 | 41 | 210 | 71 | 234 | 3.73e-35 | 130 |
MS.gene88899.t1 | AT2G24800 | 42.690 | 171 | 92 | 3 | 38 | 208 | 28 | 192 | 8.89e-33 | 122 |
MS.gene88899.t1 | AT3G42570 | 29.907 | 107 | 73 | 1 | 102 | 208 | 43 | 147 | 6.10e-11 | 60.5 |
Find 70 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTTGCTGCTATGCTTAAAA+TGG | 0.176723 | 1.1:-70716085 | MS.gene88899:CDS |
AAGTAGGACAAGTTTGTTTA+AGG | 0.199321 | 1.1:+70716292 | None:intergenic |
TCCATGACAGGGTCTTGTTT+TGG | 0.232885 | 1.1:+70716333 | None:intergenic |
CTTCCATGACTGCTTTGTTC+AGG | 0.336694 | 1.1:-70717096 | MS.gene88899:intron |
ATTGTTGTTGTGTTGCTTGA+TGG | 0.350284 | 1.1:+70716465 | None:intergenic |
TTGTGATGGATCAGTATTAT+TGG | 0.364319 | 1.1:-70716847 | MS.gene88899:CDS |
CTTCACTATAGGAGGAGGTT+TGG | 0.382309 | 1.1:+70717238 | None:intergenic |
CACCACCAAACTTGAGTCTT+AGG | 0.384280 | 1.1:-70716791 | MS.gene88899:CDS |
CAATGGCTTATGCTTCTTGT+AGG | 0.384357 | 1.1:-70717334 | MS.gene88899:CDS |
CTACTACATCTGTAGGGTTA+AGG | 0.401776 | 1.1:+70716418 | None:intergenic |
CTGATGATAGATTCAAGCTT+AGG | 0.402937 | 1.1:+70717182 | None:intergenic |
TTAATCCATCTCTCCTTCCT+AGG | 0.406924 | 1.1:+70716529 | None:intergenic |
ATTAGCACGAATTTCTCCTT+TGG | 0.416931 | 1.1:+70716038 | None:intergenic |
TTCGTGCTAATTGCTCTGTT+AGG | 0.418468 | 1.1:-70716026 | MS.gene88899:CDS |
GGTGGTGCATCTTTCTCACT+TGG | 0.424168 | 1.1:+70716807 | None:intergenic |
CATGATAGTCCCTTCACTAT+AGG | 0.430598 | 1.1:+70717227 | None:intergenic |
TTCGATTATCTTGAAGGCCT+CGG | 0.436787 | 1.1:+70716767 | None:intergenic |
GTATTTGTTATCAAATTTGT+TGG | 0.437290 | 1.1:+70716230 | None:intergenic |
TATTTGTTATCAAATTTGTT+GGG | 0.439495 | 1.1:+70716231 | None:intergenic |
TCTTATCAGTGTATAAATCT+TGG | 0.449979 | 1.1:+70716166 | None:intergenic |
AAAGGTATGGATTAGAAGAA+AGG | 0.455618 | 1.1:+70717298 | None:intergenic |
CTCTCAGGTGGTCACACAAT+AGG | 0.463629 | 1.1:-70716393 | MS.gene88899:CDS |
AAGATTTATACACTGATAAG+AGG | 0.464368 | 1.1:-70716164 | MS.gene88899:CDS |
GATGATGTTGGTCAAGCTGC+TGG | 0.480697 | 1.1:-70717134 | MS.gene88899:CDS |
AACTGTGGTGTTATCAGTGT+TGG | 0.488314 | 1.1:+70716269 | None:intergenic |
GTTGCTGCTATGCTTAAAAT+GGG | 0.493223 | 1.1:-70716084 | MS.gene88899:CDS |
TCGGTCCTAAGACTCAAGTT+TGG | 0.499279 | 1.1:+70716786 | None:intergenic |
CAAATCTTTCCTTACTTCTG+TGG | 0.502716 | 1.1:-70715992 | MS.gene88899:CDS |
ATGAAAATGCAGGGTTGTGA+TGG | 0.506653 | 1.1:-70716861 | MS.gene88899:intron |
CATCTTCCACCACAGAAGTA+AGG | 0.507687 | 1.1:+70715983 | None:intergenic |
GATGTGAGAAAATGAAAGAA+AGG | 0.511303 | 1.1:+70717280 | None:intergenic |
ACAGATGTAGTAGCACTCTC+AGG | 0.517970 | 1.1:-70716408 | MS.gene88899:CDS |
GAGAAAATGAAAGAAAGGTA+TGG | 0.521173 | 1.1:+70717285 | None:intergenic |
AACAGCATCACGAGCGGCAA+TGG | 0.523212 | 1.1:+70716683 | None:intergenic |
ATCTTTCCTTACTTCTGTGG+TGG | 0.523496 | 1.1:-70715989 | MS.gene88899:CDS |
TGGATTAACATTTGCAACAC+AGG | 0.523958 | 1.1:-70716514 | MS.gene88899:CDS |
TGTTGATCTTATGAACCGTC+AGG | 0.528938 | 1.1:-70716205 | MS.gene88899:CDS |
CTATAGTGAAGGGACTATCA+TGG | 0.530164 | 1.1:-70717226 | MS.gene88899:CDS |
GTCCTAAGACTCAAGTTTGG+TGG | 0.530334 | 1.1:+70716789 | None:intergenic |
TAATCCATCTCTCCTTCCTA+GGG | 0.531504 | 1.1:+70716530 | None:intergenic |
AAGATCTTCAATGATGATGT+TGG | 0.544356 | 1.1:-70717146 | MS.gene88899:CDS |
CAAAGCAGTCATGGAAGTGA+AGG | 0.552183 | 1.1:+70717102 | None:intergenic |
GAGAGTGCTACTACATCTGT+AGG | 0.561499 | 1.1:+70716411 | None:intergenic |
CCTGTCATGGACAAAACCTA+TGG | 0.564791 | 1.1:-70716321 | MS.gene88899:CDS |
ATACACTGATAAGAGGACTA+AGG | 0.565750 | 1.1:-70716157 | MS.gene88899:CDS |
AGTCCCTTCACTATAGGAGG+AGG | 0.565917 | 1.1:+70717233 | None:intergenic |
TTACCTGAACAAAGCAGTCA+TGG | 0.566092 | 1.1:+70717093 | None:intergenic |
GTGTTATCAGTGTTGGAAGT+AGG | 0.569777 | 1.1:+70716276 | None:intergenic |
GATAGTCCCTTCACTATAGG+AGG | 0.573316 | 1.1:+70717230 | None:intergenic |
CCGTCAGGCTCTCTTTACTT+CGG | 0.573471 | 1.1:-70716190 | MS.gene88899:CDS |
TACTTCTGTGGTGGAAGATG+CGG | 0.576534 | 1.1:-70715980 | MS.gene88899:CDS |
CAAACCTCCTCCTATAGTGA+AGG | 0.591712 | 1.1:-70717237 | MS.gene88899:CDS |
ACTACAAAATTCCCCTAGGA+AGG | 0.593729 | 1.1:-70716542 | MS.gene88899:CDS |
ATTCCCCTAGGAAGGAGAGA+TGG | 0.594591 | 1.1:-70716534 | MS.gene88899:CDS |
GATGGATCAGTATTATTGGA+TGG | 0.596952 | 1.1:-70716843 | MS.gene88899:CDS |
TTCTGTGGTGGAAGATGCGG+TGG | 0.600054 | 1.1:-70715977 | MS.gene88899:CDS |
GTTGTGTTGCTTGATGGTGA+AGG | 0.611201 | 1.1:+70716471 | None:intergenic |
AGAGTGCTACTACATCTGTA+GGG | 0.620697 | 1.1:+70716412 | None:intergenic |
CCCAAAACAAGACCCTGTCA+TGG | 0.624304 | 1.1:-70716334 | MS.gene88899:CDS |
AAACCTCCTCCTATAGTGAA+GGG | 0.624659 | 1.1:-70717236 | MS.gene88899:CDS |
CCAGACTACAAAATTCCCCT+AGG | 0.644230 | 1.1:-70716546 | MS.gene88899:CDS |
TGTTTGTGAAAGAACTGCAG+TGG | 0.657795 | 1.1:+70716364 | None:intergenic |
ACTACGAATATCTAGAACTG+TGG | 0.661587 | 1.1:+70716254 | None:intergenic |
ATTAACATTTGCAACACAGG+AGG | 0.668426 | 1.1:-70716511 | MS.gene88899:CDS |
CCGAAGTAAAGAGAGCCTGA+CGG | 0.686185 | 1.1:+70716190 | None:intergenic |
GATGTAGTAGCACTCTCAGG+TGG | 0.686682 | 1.1:-70716405 | MS.gene88899:CDS |
AGTAATATAGAGAAGCAGTG+TGG | 0.694261 | 1.1:-70716735 | MS.gene88899:CDS |
TAGGAAAACAGCATCACGAG+CGG | 0.695239 | 1.1:+70716677 | None:intergenic |
AATCCATCTCTCCTTCCTAG+GGG | 0.697642 | 1.1:+70716531 | None:intergenic |
AAACTTGAGTCTTAGGACCG+AGG | 0.714645 | 1.1:-70716784 | MS.gene88899:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATTATATTTGGTTATTTA+TGG | - | chr1.1:70716397-70716416 | MS.gene88899:CDS | 10.0% |
!! | AAATCCAAACTTATTATATT+TGG | - | chr1.1:70716387-70716406 | MS.gene88899:CDS | 15.0% |
!! | AACTATAAACAATACTAATT+AGG | - | chr1.1:70716261-70716280 | MS.gene88899:CDS | 15.0% |
!! | ATAACCAAATATAATAAGTT+TGG | + | chr1.1:70716394-70716413 | None:intergenic | 15.0% |
!!! | TATTTGTTATCAAATTTGTT+GGG | + | chr1.1:70717061-70717080 | None:intergenic | 15.0% |
!! | AAAATAAAGGTTTACTTACT+AGG | + | chr1.1:70716634-70716653 | None:intergenic | 20.0% |
!! | GTATATTTAGCTAATTAGTT+AGG | - | chr1.1:70716230-70716249 | MS.gene88899:CDS | 20.0% |
!! | GTTAAAAAAATGAAAATGCA+GGG | - | chr1.1:70716419-70716438 | MS.gene88899:CDS | 20.0% |
!!! | GTATTTGTTATCAAATTTGT+TGG | + | chr1.1:70717062-70717081 | None:intergenic | 20.0% |
! | AAGATTTATACACTGATAAG+AGG | - | chr1.1:70717125-70717144 | MS.gene88899:CDS | 25.0% |
! | GGTTAAAAAAATGAAAATGC+AGG | - | chr1.1:70716418-70716437 | MS.gene88899:CDS | 25.0% |
! | TCTTATCAGTGTATAAATCT+TGG | + | chr1.1:70717126-70717145 | None:intergenic | 25.0% |
!!! | AAGTTTTTCGATTATCTTGA+AGG | + | chr1.1:70716531-70716550 | None:intergenic | 25.0% |
!!! | CAATGTTTTATTGACATATG+TGG | - | chr1.1:70716327-70716346 | MS.gene88899:CDS | 25.0% |
CCAACTTCTCACAAAAATAA+AGG | + | chr1.1:70716647-70716666 | None:intergenic | 30.0% | |
GAGAAAATGAAAGAAAGGTA+TGG | + | chr1.1:70716007-70716026 | None:intergenic | 30.0% | |
GATGTGAGAAAATGAAAGAA+AGG | + | chr1.1:70716012-70716031 | None:intergenic | 30.0% | |
TGAATCTGTTTAGCTAACTT+TGG | - | chr1.1:70716364-70716383 | MS.gene88899:CDS | 30.0% | |
! | AAGATCTTCAATGATGATGT+TGG | - | chr1.1:70716143-70716162 | MS.gene88899:CDS | 30.0% |
! | AAGTAGGACAAGTTTGTTTA+AGG | + | chr1.1:70717000-70717019 | None:intergenic | 30.0% |
! | ATAGAAGCTGTACATTTTCA+CGG | + | chr1.1:70716306-70716325 | None:intergenic | 30.0% |
!! | AAAGGTATGGATTAGAAGAA+AGG | + | chr1.1:70715994-70716013 | None:intergenic | 30.0% |
!! | TTGTGATGGATCAGTATTAT+TGG | - | chr1.1:70716442-70716461 | MS.gene88899:CDS | 30.0% |
!! | TTGTTTAAGGTTTTTGCCAT+AGG | + | chr1.1:70716987-70717006 | None:intergenic | 30.0% |
!!! | CCTTTATTTTTGTGAGAAGT+TGG | - | chr1.1:70716644-70716663 | MS.gene88899:intron | 30.0% |
AGTAATATAGAGAAGCAGTG+TGG | - | chr1.1:70716554-70716573 | MS.gene88899:CDS | 35.0% | |
ATACACTGATAAGAGGACTA+AGG | - | chr1.1:70717132-70717151 | MS.gene88899:CDS | 35.0% | |
ATTAACATTTGCAACACAGG+AGG | - | chr1.1:70716778-70716797 | MS.gene88899:CDS | 35.0% | |
ATTAGCACGAATTTCTCCTT+TGG | + | chr1.1:70717254-70717273 | None:intergenic | 35.0% | |
CAAATCTTTCCTTACTTCTG+TGG | - | chr1.1:70717297-70717316 | MS.gene88899:CDS | 35.0% | |
CTGATGATAGATTCAAGCTT+AGG | + | chr1.1:70716110-70716129 | None:intergenic | 35.0% | |
GATGGATCAGTATTATTGGA+TGG | - | chr1.1:70716446-70716465 | MS.gene88899:CDS | 35.0% | |
GTTGCTGCTATGCTTAAAAT+GGG | - | chr1.1:70717205-70717224 | MS.gene88899:CDS | 35.0% | |
TGGATTAACATTTGCAACAC+AGG | - | chr1.1:70716775-70716794 | MS.gene88899:CDS | 35.0% | |
TGTTGCTGCTATGCTTAAAA+TGG | - | chr1.1:70717204-70717223 | MS.gene88899:CDS | 35.0% | |
! | ACTACGAATATCTAGAACTG+TGG | + | chr1.1:70717038-70717057 | None:intergenic | 35.0% |
! | AGGACATTTTGAATCGTAGA+AGG | + | chr1.1:70716090-70716109 | None:intergenic | 35.0% |
!! | ATTGTTGTTGTGTTGCTTGA+TGG | + | chr1.1:70716827-70716846 | None:intergenic | 35.0% |
!! | CATGTTTTTACATTGCAGTC+AGG | - | chr1.1:70716716-70716735 | MS.gene88899:CDS | 35.0% |
!!! | AATGTTTTGACTGGAACCAA+AGG | - | chr1.1:70717235-70717254 | MS.gene88899:CDS | 35.0% |
!!! | TGTAGGGTTAAGGTTTTTTG+TGG | + | chr1.1:70716864-70716883 | None:intergenic | 35.0% |
AAACCTCCTCCTATAGTGAA+GGG | - | chr1.1:70716053-70716072 | MS.gene88899:CDS | 40.0% | |
ACTACAAAATTCCCCTAGGA+AGG | - | chr1.1:70716747-70716766 | MS.gene88899:CDS | 40.0% | |
ATCTTTCCTTACTTCTGTGG+TGG | - | chr1.1:70717300-70717319 | MS.gene88899:CDS | 40.0% | |
ATGAAAATGCAGGGTTGTGA+TGG | - | chr1.1:70716428-70716447 | MS.gene88899:CDS | 40.0% | |
CATGATAGTCCCTTCACTAT+AGG | + | chr1.1:70716065-70716084 | None:intergenic | 40.0% | |
CTACTACATCTGTAGGGTTA+AGG | + | chr1.1:70716874-70716893 | None:intergenic | 40.0% | |
CTATAGTGAAGGGACTATCA+TGG | - | chr1.1:70716063-70716082 | MS.gene88899:CDS | 40.0% | |
TAATCCATCTCTCCTTCCTA+GGG | + | chr1.1:70716762-70716781 | None:intergenic | 40.0% | |
TGTTGATCTTATGAACCGTC+AGG | - | chr1.1:70717084-70717103 | MS.gene88899:intron | 40.0% | |
TGTTTGTGAAAGAACTGCAG+TGG | + | chr1.1:70716928-70716947 | None:intergenic | 40.0% | |
TTAATCCATCTCTCCTTCCT+AGG | + | chr1.1:70716763-70716782 | None:intergenic | 40.0% | |
TTACCTGAACAAAGCAGTCA+TGG | + | chr1.1:70716199-70716218 | None:intergenic | 40.0% | |
TTCGATTATCTTGAAGGCCT+CGG | + | chr1.1:70716525-70716544 | None:intergenic | 40.0% | |
TTCGTGCTAATTGCTCTGTT+AGG | - | chr1.1:70717263-70717282 | MS.gene88899:CDS | 40.0% | |
! | AGAGTGCTACTACATCTGTA+GGG | + | chr1.1:70716880-70716899 | None:intergenic | 40.0% |
! | GTGTTATCAGTGTTGGAAGT+AGG | + | chr1.1:70717016-70717035 | None:intergenic | 40.0% |
! | GTTTTTACATTGCAGTCAGG+AGG | - | chr1.1:70716719-70716738 | MS.gene88899:CDS | 40.0% |
!! | AACTGTGGTGTTATCAGTGT+TGG | + | chr1.1:70717023-70717042 | None:intergenic | 40.0% |
!! | CATAGGTTTTGTCCATGACA+GGG | + | chr1.1:70716970-70716989 | None:intergenic | 40.0% |
!!! | GGACAGCTTAATGTTTTGAC+TGG | - | chr1.1:70717226-70717245 | MS.gene88899:CDS | 40.0% |
AAACTTGAGTCTTAGGACCG+AGG | - | chr1.1:70716505-70716524 | MS.gene88899:CDS | 45.0% | |
AATCCATCTCTCCTTCCTAG+GGG | + | chr1.1:70716761-70716780 | None:intergenic | 45.0% | |
ACAGATGTAGTAGCACTCTC+AGG | - | chr1.1:70716881-70716900 | MS.gene88899:intron | 45.0% | |
CAAACCTCCTCCTATAGTGA+AGG | - | chr1.1:70716052-70716071 | MS.gene88899:CDS | 45.0% | |
CAAAGCAGTCATGGAAGTGA+AGG | + | chr1.1:70716190-70716209 | None:intergenic | 45.0% | |
CACCACCAAACTTGAGTCTT+AGG | - | chr1.1:70716498-70716517 | MS.gene88899:CDS | 45.0% | |
CATCTTCCACCACAGAAGTA+AGG | + | chr1.1:70717309-70717328 | None:intergenic | 45.0% | |
CCAGACTACAAAATTCCCCT+AGG | - | chr1.1:70716743-70716762 | MS.gene88899:CDS | 45.0% | |
CCTGTCATGGACAAAACCTA+TGG | - | chr1.1:70716968-70716987 | MS.gene88899:intron | 45.0% | |
CTTCACTATAGGAGGAGGTT+TGG | + | chr1.1:70716054-70716073 | None:intergenic | 45.0% | |
GATAGTCCCTTCACTATAGG+AGG | + | chr1.1:70716062-70716081 | None:intergenic | 45.0% | |
GTCCTAAGACTCAAGTTTGG+TGG | + | chr1.1:70716503-70716522 | None:intergenic | 45.0% | |
TAGGAAAACAGCATCACGAG+CGG | + | chr1.1:70716615-70716634 | None:intergenic | 45.0% | |
TCGGTCCTAAGACTCAAGTT+TGG | + | chr1.1:70716506-70716525 | None:intergenic | 45.0% | |
! | CCTAGGGGAATTTTGTAGTC+TGG | + | chr1.1:70716746-70716765 | None:intergenic | 45.0% |
! | CTTCCATGACTGCTTTGTTC+AGG | - | chr1.1:70716193-70716212 | MS.gene88899:CDS | 45.0% |
! | TACTTCTGTGGTGGAAGATG+CGG | - | chr1.1:70717309-70717328 | MS.gene88899:CDS | 45.0% |
!! | CCATAGGTTTTGTCCATGAC+AGG | + | chr1.1:70716971-70716990 | None:intergenic | 45.0% |
!! | GAGAGTGCTACTACATCTGT+AGG | + | chr1.1:70716881-70716900 | None:intergenic | 45.0% |
!! | GTTGTGTTGCTTGATGGTGA+AGG | + | chr1.1:70716821-70716840 | None:intergenic | 45.0% |
!!! | CCATGACAGGGTCTTGTTTT+GGG | + | chr1.1:70716958-70716977 | None:intergenic | 45.0% |
!!! | TCCATGACAGGGTCTTGTTT+TGG | + | chr1.1:70716959-70716978 | None:intergenic | 45.0% |
AGTCCCTTCACTATAGGAGG+AGG | + | chr1.1:70716059-70716078 | None:intergenic | 50.0% | |
ATTCCCCTAGGAAGGAGAGA+TGG | - | chr1.1:70716755-70716774 | MS.gene88899:CDS | 50.0% | |
CCCAAAACAAGACCCTGTCA+TGG | - | chr1.1:70716955-70716974 | MS.gene88899:intron | 50.0% | |
CCGAAGTAAAGAGAGCCTGA+CGG | + | chr1.1:70717102-70717121 | None:intergenic | 50.0% | |
CCGTCAGGCTCTCTTTACTT+CGG | - | chr1.1:70717099-70717118 | MS.gene88899:CDS | 50.0% | |
CTCTCAGGTGGTCACACAAT+AGG | - | chr1.1:70716896-70716915 | MS.gene88899:intron | 50.0% | |
GATGATGTTGGTCAAGCTGC+TGG | - | chr1.1:70716155-70716174 | MS.gene88899:CDS | 50.0% | |
GATGTAGTAGCACTCTCAGG+TGG | - | chr1.1:70716884-70716903 | MS.gene88899:intron | 50.0% | |
GGTGGTGCATCTTTCTCACT+TGG | + | chr1.1:70716485-70716504 | None:intergenic | 50.0% | |
AACAGCATCACGAGCGGCAA+TGG | + | chr1.1:70716609-70716628 | None:intergenic | 55.0% | |
! | TTCTGTGGTGGAAGATGCGG+TGG | - | chr1.1:70717312-70717331 | MS.gene88899:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 70715957 | 70717354 | 70715957 | ID=MS.gene88899 |
chr1.1 | mRNA | 70715957 | 70717354 | 70715957 | ID=MS.gene88899.t1;Parent=MS.gene88899 |
chr1.1 | exon | 70717097 | 70717354 | 70717097 | ID=MS.gene88899.t1.exon1;Parent=MS.gene88899.t1 |
chr1.1 | CDS | 70717097 | 70717354 | 70717097 | ID=cds.MS.gene88899.t1;Parent=MS.gene88899.t1 |
chr1.1 | exon | 70716677 | 70716871 | 70716677 | ID=MS.gene88899.t1.exon2;Parent=MS.gene88899.t1 |
chr1.1 | CDS | 70716677 | 70716871 | 70716677 | ID=cds.MS.gene88899.t1;Parent=MS.gene88899.t1 |
chr1.1 | exon | 70715957 | 70716577 | 70715957 | ID=MS.gene88899.t1.exon3;Parent=MS.gene88899.t1 |
chr1.1 | CDS | 70715957 | 70716577 | 70715957 | ID=cds.MS.gene88899.t1;Parent=MS.gene88899.t1 |
Gene Sequence |
Protein sequence |