Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006133.t1 | PNX96243.1 | 91.6 | 358 | 29 | 1 | 1 | 357 | 1 | 358 | 5.00E-184 | 653.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006133.t1 | Q96520 | 62.1 | 330 | 122 | 2 | 28 | 357 | 31 | 357 | 1.5e-120 | 434.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006133.t1 | A0A2K3MZL7 | 91.6 | 358 | 29 | 1 | 1 | 357 | 1 | 358 | 3.6e-184 | 653.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006133.t1 | MTR_6g043240 | 56.857 | 350 | 142 | 4 | 8 | 354 | 9 | 352 | 1.58e-144 | 413 |
MS.gene006133.t1 | MTR_6g043280 | 53.116 | 337 | 152 | 5 | 1 | 336 | 1 | 332 | 5.49e-125 | 362 |
MS.gene006133.t1 | MTR_6g043460 | 48.830 | 342 | 164 | 5 | 1 | 340 | 1 | 333 | 7.38e-111 | 327 |
MS.gene006133.t1 | MTR_5g021060 | 46.780 | 295 | 148 | 5 | 45 | 332 | 34 | 326 | 2.94e-87 | 266 |
MS.gene006133.t1 | MTR_2g029750 | 45.342 | 322 | 163 | 7 | 41 | 352 | 29 | 347 | 3.20e-87 | 267 |
MS.gene006133.t1 | MTR_0155s0040 | 43.686 | 293 | 158 | 4 | 40 | 332 | 26 | 311 | 7.26e-87 | 265 |
MS.gene006133.t1 | MTR_2g029815 | 44.762 | 315 | 162 | 6 | 34 | 339 | 22 | 333 | 2.83e-86 | 265 |
MS.gene006133.t1 | MTR_3g092990 | 47.213 | 305 | 148 | 6 | 41 | 336 | 26 | 326 | 8.31e-86 | 263 |
MS.gene006133.t1 | MTR_2g029860 | 41.983 | 343 | 178 | 7 | 19 | 352 | 16 | 346 | 2.11e-85 | 262 |
MS.gene006133.t1 | MTR_1g077000 | 42.123 | 292 | 162 | 4 | 41 | 332 | 39 | 323 | 2.05e-84 | 259 |
MS.gene006133.t1 | MTR_8g076820 | 44.816 | 299 | 156 | 5 | 45 | 336 | 34 | 330 | 3.39e-84 | 258 |
MS.gene006133.t1 | MTR_2g029830 | 43.034 | 323 | 172 | 6 | 41 | 354 | 28 | 347 | 3.05e-83 | 257 |
MS.gene006133.t1 | MTR_1g086320 | 45.928 | 307 | 152 | 7 | 41 | 336 | 30 | 333 | 4.86e-83 | 256 |
MS.gene006133.t1 | MTR_2g028980 | 42.690 | 342 | 171 | 8 | 12 | 339 | 3 | 333 | 5.02e-83 | 256 |
MS.gene006133.t1 | MTR_8g075100 | 45.215 | 303 | 150 | 6 | 41 | 336 | 26 | 319 | 5.18e-83 | 255 |
MS.gene006133.t1 | MTR_2g029560 | 44.051 | 311 | 162 | 6 | 41 | 342 | 24 | 331 | 8.73e-83 | 255 |
MS.gene006133.t1 | MTR_2g029820 | 44.481 | 308 | 159 | 6 | 41 | 339 | 29 | 333 | 1.48e-82 | 255 |
MS.gene006133.t1 | MTR_7g093370 | 42.249 | 329 | 170 | 7 | 13 | 332 | 50 | 367 | 4.13e-82 | 254 |
MS.gene006133.t1 | MTR_2g088770 | 45.246 | 305 | 153 | 7 | 41 | 336 | 26 | 325 | 8.02e-82 | 252 |
MS.gene006133.t1 | MTR_2g040000 | 41.691 | 343 | 174 | 9 | 5 | 336 | 4 | 331 | 2.03e-81 | 251 |
MS.gene006133.t1 | MTR_2g029740 | 43.175 | 315 | 167 | 6 | 45 | 350 | 33 | 344 | 2.89e-81 | 252 |
MS.gene006133.t1 | MTR_4g125940 | 42.105 | 342 | 172 | 8 | 5 | 336 | 4 | 329 | 5.18e-81 | 250 |
MS.gene006133.t1 | MTR_4g029170 | 40.248 | 323 | 185 | 6 | 17 | 336 | 4 | 321 | 1.03e-80 | 249 |
MS.gene006133.t1 | MTR_2g029730 | 43.574 | 319 | 170 | 5 | 41 | 351 | 25 | 341 | 1.12e-80 | 250 |
MS.gene006133.t1 | MTR_2g029800 | 42.857 | 308 | 164 | 6 | 41 | 339 | 29 | 333 | 1.13e-80 | 250 |
MS.gene006133.t1 | MTR_1g086490 | 44.904 | 314 | 152 | 7 | 41 | 336 | 30 | 340 | 2.56e-80 | 249 |
MS.gene006133.t1 | MTR_1g022970 | 44.518 | 301 | 157 | 5 | 40 | 332 | 45 | 343 | 3.90e-80 | 249 |
MS.gene006133.t1 | MTR_5g022870 | 42.857 | 301 | 156 | 7 | 39 | 332 | 21 | 312 | 5.54e-80 | 247 |
MS.gene006133.t1 | MTR_4g095450 | 42.761 | 297 | 166 | 3 | 41 | 334 | 27 | 322 | 5.85e-80 | 247 |
MS.gene006133.t1 | MTR_2g084110 | 42.321 | 293 | 164 | 4 | 45 | 336 | 29 | 317 | 7.74e-80 | 247 |
MS.gene006133.t1 | MTR_7g029030 | 43.289 | 298 | 165 | 4 | 41 | 336 | 25 | 320 | 8.96e-80 | 247 |
MS.gene006133.t1 | MTR_1g101830 | 41.538 | 325 | 167 | 7 | 19 | 336 | 14 | 322 | 3.17e-79 | 245 |
MS.gene006133.t1 | MTR_4g083710 | 42.525 | 301 | 165 | 5 | 41 | 336 | 27 | 324 | 6.88e-79 | 244 |
MS.gene006133.t1 | MTR_1g038680 | 43.709 | 302 | 158 | 7 | 45 | 336 | 33 | 332 | 8.87e-79 | 244 |
MS.gene006133.t1 | MTR_2g084080 | 41.638 | 293 | 166 | 4 | 45 | 336 | 29 | 317 | 9.12e-79 | 244 |
MS.gene006133.t1 | MTR_7g086820 | 42.810 | 306 | 166 | 4 | 35 | 337 | 14 | 313 | 9.25e-79 | 244 |
MS.gene006133.t1 | MTR_1g054205 | 41.722 | 302 | 163 | 7 | 41 | 332 | 24 | 322 | 2.34e-78 | 243 |
MS.gene006133.t1 | MTR_3g466200 | 41.562 | 320 | 172 | 4 | 16 | 332 | 9 | 316 | 2.65e-78 | 243 |
MS.gene006133.t1 | MTR_5g017850 | 42.071 | 309 | 169 | 5 | 35 | 336 | 21 | 326 | 5.52e-78 | 243 |
MS.gene006133.t1 | MTR_2g008710 | 43.831 | 308 | 156 | 6 | 39 | 336 | 25 | 325 | 8.16e-78 | 242 |
MS.gene006133.t1 | MTR_5g017860 | 42.903 | 310 | 165 | 5 | 35 | 336 | 21 | 326 | 1.08e-77 | 242 |
MS.gene006133.t1 | MTR_4g046713 | 42.809 | 299 | 161 | 5 | 45 | 336 | 31 | 326 | 1.09e-77 | 242 |
MS.gene006133.t1 | MTR_7g086870 | 41.216 | 296 | 168 | 3 | 41 | 336 | 22 | 311 | 1.40e-77 | 241 |
MS.gene006133.t1 | MTR_7g072510 | 42.282 | 298 | 165 | 5 | 41 | 336 | 20 | 312 | 1.45e-77 | 241 |
MS.gene006133.t1 | MTR_7g107520 | 41.818 | 330 | 172 | 7 | 13 | 336 | 5 | 320 | 1.65e-77 | 241 |
MS.gene006133.t1 | MTR_2g029850 | 42.679 | 321 | 171 | 7 | 41 | 352 | 29 | 345 | 4.55e-77 | 241 |
MS.gene006133.t1 | MTR_2g084020 | 42.177 | 294 | 164 | 5 | 45 | 336 | 29 | 318 | 1.00e-76 | 239 |
MS.gene006133.t1 | MTR_5g074970 | 42.193 | 301 | 165 | 4 | 41 | 336 | 30 | 326 | 1.14e-76 | 239 |
MS.gene006133.t1 | MTR_5g016010 | 41.234 | 308 | 170 | 5 | 36 | 334 | 22 | 327 | 1.16e-76 | 239 |
MS.gene006133.t1 | MTR_5g014100 | 43.322 | 307 | 154 | 9 | 45 | 336 | 30 | 331 | 1.55e-76 | 239 |
MS.gene006133.t1 | MTR_7g072480 | 42.320 | 319 | 168 | 6 | 16 | 332 | 8 | 312 | 2.37e-76 | 238 |
MS.gene006133.t1 | MTR_3g072190 | 39.692 | 325 | 183 | 6 | 9 | 332 | 2 | 314 | 2.99e-76 | 238 |
MS.gene006133.t1 | MTR_1g025980 | 40.984 | 305 | 165 | 7 | 37 | 334 | 20 | 316 | 4.32e-76 | 237 |
MS.gene006133.t1 | MTR_5g049280 | 37.168 | 339 | 194 | 8 | 10 | 336 | 6 | 337 | 5.07e-76 | 238 |
MS.gene006133.t1 | MTR_2g084010 | 41.837 | 294 | 165 | 5 | 45 | 336 | 29 | 318 | 1.04e-75 | 236 |
MS.gene006133.t1 | MTR_4g029200 | 43.607 | 305 | 165 | 5 | 34 | 336 | 39 | 338 | 1.05e-75 | 237 |
MS.gene006133.t1 | MTR_3g094650 | 41.017 | 295 | 167 | 4 | 41 | 332 | 28 | 318 | 1.09e-75 | 236 |
MS.gene006133.t1 | MTR_5g074760 | 41.558 | 308 | 171 | 6 | 36 | 338 | 20 | 323 | 2.36e-75 | 236 |
MS.gene006133.t1 | MTR_4g074990 | 39.412 | 340 | 167 | 7 | 1 | 336 | 1 | 305 | 8.84e-75 | 233 |
MS.gene006133.t1 | MTR_4g074995 | 41.196 | 301 | 156 | 5 | 41 | 336 | 24 | 308 | 9.90e-75 | 233 |
MS.gene006133.t1 | MTR_4g029180 | 40.476 | 294 | 170 | 4 | 45 | 336 | 31 | 321 | 1.36e-74 | 234 |
MS.gene006133.t1 | MTR_4g127670 | 41.447 | 304 | 166 | 6 | 41 | 336 | 24 | 323 | 2.00e-74 | 233 |
MS.gene006133.t1 | MTR_2g084000 | 38.906 | 329 | 183 | 7 | 10 | 336 | 7 | 319 | 2.22e-74 | 233 |
MS.gene006133.t1 | MTR_2g084090 | 40.476 | 294 | 169 | 4 | 45 | 336 | 29 | 318 | 3.82e-74 | 232 |
MS.gene006133.t1 | MTR_6g027440 | 39.344 | 305 | 177 | 3 | 35 | 336 | 15 | 314 | 1.11e-73 | 231 |
MS.gene006133.t1 | MTR_4g030890 | 43.289 | 298 | 158 | 5 | 45 | 336 | 104 | 396 | 1.21e-73 | 234 |
MS.gene006133.t1 | MTR_3g092990 | 44.918 | 305 | 144 | 7 | 41 | 336 | 26 | 315 | 1.22e-73 | 231 |
MS.gene006133.t1 | MTR_5g083860 | 40.468 | 299 | 171 | 4 | 41 | 336 | 31 | 325 | 1.37e-73 | 231 |
MS.gene006133.t1 | MTR_2g029910 | 40.694 | 317 | 175 | 6 | 45 | 352 | 34 | 346 | 3.81e-73 | 231 |
MS.gene006133.t1 | MTR_4g114210 | 43.279 | 305 | 153 | 8 | 41 | 333 | 21 | 317 | 4.44e-72 | 227 |
MS.gene006133.t1 | MTR_4g122640 | 38.323 | 334 | 197 | 6 | 9 | 336 | 6 | 336 | 1.04e-71 | 227 |
MS.gene006133.t1 | MTR_4g132490 | 40.065 | 307 | 173 | 6 | 38 | 336 | 24 | 327 | 1.40e-71 | 226 |
MS.gene006133.t1 | MTR_2g437770 | 40.728 | 302 | 163 | 7 | 41 | 336 | 50 | 341 | 1.92e-71 | 226 |
MS.gene006133.t1 | MTR_4g125940 | 44.928 | 276 | 138 | 6 | 71 | 336 | 3 | 274 | 1.99e-71 | 224 |
MS.gene006133.t1 | MTR_5g074740 | 40.717 | 307 | 173 | 6 | 36 | 337 | 20 | 322 | 2.67e-71 | 225 |
MS.gene006133.t1 | MTR_4g031140 | 40.940 | 298 | 165 | 5 | 45 | 336 | 32 | 324 | 4.96e-71 | 225 |
MS.gene006133.t1 | MTR_1g009750 | 39.672 | 305 | 172 | 6 | 41 | 336 | 27 | 328 | 7.65e-71 | 224 |
MS.gene006133.t1 | MTR_4g087965 | 39.104 | 335 | 192 | 6 | 11 | 334 | 11 | 344 | 9.77e-71 | 224 |
MS.gene006133.t1 | MTR_3g094670 | 40.339 | 295 | 169 | 4 | 41 | 332 | 28 | 318 | 1.82e-70 | 223 |
MS.gene006133.t1 | MTR_5g074860 | 40.604 | 298 | 166 | 8 | 41 | 332 | 29 | 321 | 6.31e-70 | 222 |
MS.gene006133.t1 | MTR_7g026990 | 40.614 | 293 | 168 | 4 | 45 | 336 | 35 | 322 | 1.25e-69 | 221 |
MS.gene006133.t1 | MTR_1g090760 | 38.689 | 305 | 178 | 4 | 41 | 337 | 28 | 331 | 1.62e-69 | 221 |
MS.gene006133.t1 | MTR_5g074710 | 39.286 | 308 | 176 | 7 | 36 | 337 | 20 | 322 | 3.19e-69 | 220 |
MS.gene006133.t1 | MTR_4g074980 | 40.203 | 296 | 151 | 6 | 41 | 336 | 25 | 294 | 1.37e-67 | 214 |
MS.gene006133.t1 | MTR_3g094630 | 40.000 | 295 | 170 | 4 | 41 | 332 | 28 | 318 | 1.68e-66 | 213 |
MS.gene006133.t1 | MTR_2g029830 | 42.086 | 278 | 149 | 6 | 86 | 354 | 5 | 279 | 1.78e-66 | 211 |
MS.gene006133.t1 | MTR_4g029190 | 42.955 | 291 | 157 | 6 | 50 | 336 | 55 | 340 | 2.69e-66 | 213 |
MS.gene006133.t1 | MTR_1g066710 | 36.184 | 304 | 183 | 4 | 41 | 338 | 27 | 325 | 7.04e-66 | 211 |
MS.gene006133.t1 | MTR_3g466180 | 41.156 | 294 | 166 | 5 | 41 | 332 | 31 | 319 | 9.08e-66 | 211 |
MS.gene006133.t1 | MTR_4g133800 | 38.926 | 298 | 167 | 6 | 46 | 337 | 46 | 334 | 1.59e-65 | 211 |
MS.gene006133.t1 | MTR_8g062780 | 37.419 | 310 | 183 | 5 | 36 | 336 | 17 | 324 | 2.10e-65 | 210 |
MS.gene006133.t1 | MTR_3g467600 | 38.438 | 333 | 182 | 11 | 10 | 336 | 9 | 324 | 4.74e-65 | 209 |
MS.gene006133.t1 | MTR_1g115900 | 39.867 | 301 | 170 | 7 | 41 | 336 | 27 | 321 | 6.94e-64 | 206 |
MS.gene006133.t1 | MTR_4g074980 | 44.828 | 232 | 121 | 4 | 41 | 268 | 25 | 253 | 7.87e-64 | 204 |
MS.gene006133.t1 | MTR_1g066380 | 34.426 | 305 | 193 | 3 | 38 | 338 | 24 | 325 | 4.99e-63 | 204 |
MS.gene006133.t1 | MTR_4g132110 | 34.983 | 303 | 190 | 3 | 40 | 338 | 31 | 330 | 5.45e-63 | 204 |
MS.gene006133.t1 | MTR_1g066640 | 34.437 | 302 | 191 | 3 | 41 | 338 | 27 | 325 | 4.06e-61 | 199 |
MS.gene006133.t1 | MTR_2g099175 | 36.628 | 344 | 195 | 8 | 7 | 337 | 3 | 336 | 5.81e-61 | 199 |
MS.gene006133.t1 | MTR_4g132110 | 34.416 | 308 | 190 | 4 | 40 | 338 | 31 | 335 | 8.76e-61 | 199 |
MS.gene006133.t1 | MTR_1g009750 | 36.964 | 303 | 166 | 7 | 41 | 336 | 27 | 311 | 5.39e-60 | 196 |
MS.gene006133.t1 | MTR_0286s0010 | 37.248 | 298 | 180 | 4 | 41 | 332 | 34 | 330 | 1.44e-59 | 195 |
MS.gene006133.t1 | MTR_6g008075 | 37.248 | 298 | 180 | 4 | 41 | 332 | 34 | 330 | 1.44e-59 | 195 |
MS.gene006133.t1 | MTR_2g067440 | 34.650 | 329 | 175 | 7 | 41 | 333 | 60 | 384 | 4.50e-59 | 196 |
MS.gene006133.t1 | MTR_1g098320 | 91.089 | 101 | 5 | 1 | 257 | 357 | 45 | 141 | 1.86e-58 | 186 |
MS.gene006133.t1 | MTR_3g072190 | 38.400 | 250 | 149 | 4 | 84 | 332 | 2 | 247 | 1.93e-58 | 190 |
MS.gene006133.t1 | MTR_3g105790 | 36.688 | 308 | 181 | 5 | 37 | 336 | 21 | 322 | 2.54e-57 | 189 |
MS.gene006133.t1 | MTR_2g008160 | 35.948 | 306 | 180 | 7 | 41 | 336 | 24 | 323 | 9.00e-57 | 187 |
MS.gene006133.t1 | MTR_1g066680 | 33.993 | 303 | 190 | 5 | 41 | 338 | 27 | 324 | 3.71e-56 | 186 |
MS.gene006133.t1 | MTR_2g077990 | 34.139 | 331 | 177 | 7 | 41 | 333 | 76 | 403 | 5.79e-56 | 188 |
MS.gene006133.t1 | MTR_2g078610 | 34.139 | 331 | 177 | 7 | 41 | 333 | 76 | 403 | 8.13e-56 | 187 |
MS.gene006133.t1 | MTR_2g008730 | 37.013 | 308 | 153 | 6 | 39 | 336 | 25 | 301 | 1.48e-54 | 181 |
MS.gene006133.t1 | MTR_2g078280 | 34.062 | 320 | 170 | 7 | 41 | 322 | 76 | 392 | 3.15e-51 | 175 |
MS.gene006133.t1 | MTR_5g033470 | 34.641 | 306 | 189 | 5 | 41 | 336 | 73 | 377 | 8.13e-51 | 174 |
MS.gene006133.t1 | MTR_1g066380 | 34.884 | 258 | 161 | 3 | 85 | 338 | 3 | 257 | 3.18e-50 | 169 |
MS.gene006133.t1 | MTR_5g074860 | 34.228 | 298 | 146 | 8 | 41 | 332 | 29 | 282 | 6.57e-48 | 164 |
MS.gene006133.t1 | MTR_2g067450 | 34.219 | 301 | 186 | 6 | 41 | 333 | 11 | 307 | 8.78e-48 | 164 |
MS.gene006133.t1 | MTR_2g008160 | 33.113 | 302 | 159 | 7 | 41 | 336 | 24 | 288 | 1.51e-45 | 157 |
MS.gene006133.t1 | MTR_0147s0010 | 31.250 | 320 | 176 | 7 | 41 | 333 | 77 | 379 | 7.75e-45 | 158 |
MS.gene006133.t1 | MTR_5g074700 | 39.381 | 226 | 119 | 6 | 115 | 337 | 5 | 215 | 1.69e-44 | 152 |
MS.gene006133.t1 | MTR_2g029880 | 42.718 | 206 | 99 | 6 | 154 | 352 | 9 | 202 | 6.26e-43 | 148 |
MS.gene006133.t1 | MTR_3g105790 | 36.111 | 252 | 147 | 5 | 93 | 336 | 1 | 246 | 1.02e-39 | 141 |
MS.gene006133.t1 | MTR_2g008160 | 39.205 | 176 | 101 | 3 | 41 | 216 | 24 | 193 | 4.67e-39 | 138 |
MS.gene006133.t1 | MTR_5g058120 | 45.000 | 160 | 82 | 2 | 174 | 332 | 1 | 155 | 3.92e-35 | 129 |
MS.gene006133.t1 | MTR_3g072210 | 36.364 | 187 | 113 | 5 | 153 | 336 | 55 | 238 | 3.61e-33 | 123 |
MS.gene006133.t1 | MTR_7g072490 | 34.426 | 244 | 101 | 5 | 87 | 329 | 2 | 187 | 3.33e-30 | 115 |
MS.gene006133.t1 | MTR_3g072260 | 41.135 | 141 | 74 | 3 | 9 | 149 | 2 | 133 | 4.26e-27 | 104 |
MS.gene006133.t1 | MTR_2g078560 | 30.357 | 224 | 118 | 5 | 147 | 333 | 95 | 317 | 2.00e-23 | 99.4 |
MS.gene006133.t1 | MTR_4g114220 | 51.020 | 98 | 35 | 3 | 57 | 152 | 17 | 103 | 8.51e-22 | 90.5 |
MS.gene006133.t1 | MTR_7g086790 | 32.461 | 191 | 111 | 5 | 88 | 278 | 17 | 189 | 1.08e-21 | 91.7 |
MS.gene006133.t1 | MTR_3g462850 | 33.099 | 142 | 82 | 5 | 207 | 336 | 9 | 149 | 1.55e-18 | 81.6 |
MS.gene006133.t1 | MTR_6g048160 | 54.167 | 72 | 28 | 2 | 80 | 151 | 22 | 88 | 5.01e-18 | 78.6 |
MS.gene006133.t1 | MTR_1g089005 | 36.975 | 119 | 67 | 2 | 41 | 153 | 15 | 131 | 7.47e-18 | 80.1 |
MS.gene006133.t1 | MTR_7g107500 | 52.703 | 74 | 34 | 1 | 263 | 336 | 25 | 97 | 1.17e-16 | 75.1 |
MS.gene006133.t1 | MTR_4g012865 | 45.588 | 68 | 37 | 0 | 41 | 108 | 77 | 144 | 6.38e-16 | 74.7 |
MS.gene006133.t1 | MTR_4g031040 | 36.752 | 117 | 62 | 2 | 152 | 268 | 25 | 129 | 2.29e-14 | 69.7 |
MS.gene006133.t1 | MTR_7g086810 | 36.207 | 116 | 47 | 3 | 45 | 160 | 10 | 98 | 2.39e-13 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006133.t1 | AT1G71695 | 59.829 | 351 | 134 | 3 | 11 | 357 | 10 | 357 | 6.67e-161 | 455 |
MS.gene006133.t1 | AT2G18150 | 44.068 | 295 | 156 | 5 | 45 | 332 | 40 | 332 | 1.97e-86 | 265 |
MS.gene006133.t1 | AT4G36430 | 43.390 | 295 | 158 | 5 | 45 | 332 | 34 | 326 | 2.35e-85 | 261 |
MS.gene006133.t1 | AT2G18140 | 44.407 | 295 | 155 | 5 | 45 | 332 | 39 | 331 | 2.35e-85 | 262 |
MS.gene006133.t1 | AT5G14130 | 42.724 | 323 | 169 | 4 | 19 | 336 | 19 | 330 | 2.31e-84 | 259 |
MS.gene006133.t1 | AT5G14130 | 42.724 | 323 | 169 | 4 | 19 | 336 | 60 | 371 | 9.28e-84 | 259 |
MS.gene006133.t1 | AT5G06730 | 41.026 | 351 | 185 | 8 | 1 | 341 | 1 | 339 | 1.14e-83 | 258 |
MS.gene006133.t1 | AT5G66390 | 44.407 | 295 | 155 | 5 | 45 | 332 | 37 | 329 | 4.54e-83 | 256 |
MS.gene006133.t1 | AT1G05260 | 44.984 | 309 | 158 | 7 | 36 | 336 | 21 | 325 | 8.65e-83 | 255 |
MS.gene006133.t1 | AT4G08780 | 43.478 | 322 | 168 | 7 | 41 | 352 | 24 | 341 | 1.14e-82 | 255 |
MS.gene006133.t1 | AT3G21770 | 44.514 | 319 | 154 | 8 | 25 | 334 | 22 | 326 | 3.75e-82 | 253 |
MS.gene006133.t1 | AT4G33420 | 42.006 | 319 | 166 | 5 | 14 | 332 | 22 | 321 | 5.57e-82 | 253 |
MS.gene006133.t1 | AT4G33420 | 42.006 | 319 | 166 | 5 | 14 | 332 | 69 | 368 | 2.24e-81 | 253 |
MS.gene006133.t1 | AT1G49570 | 43.607 | 305 | 161 | 4 | 37 | 332 | 44 | 346 | 2.55e-81 | 252 |
MS.gene006133.t1 | AT3G32980 | 42.730 | 337 | 166 | 9 | 24 | 348 | 23 | 344 | 8.34e-81 | 251 |
MS.gene006133.t1 | AT4G16270 | 45.574 | 305 | 151 | 8 | 41 | 336 | 50 | 348 | 1.30e-80 | 250 |
MS.gene006133.t1 | AT4G08770 | 41.716 | 338 | 176 | 8 | 25 | 352 | 15 | 341 | 1.90e-80 | 249 |
MS.gene006133.t1 | AT5G51890 | 43.692 | 325 | 166 | 8 | 20 | 336 | 7 | 322 | 4.39e-80 | 248 |
MS.gene006133.t1 | AT3G49120 | 41.718 | 326 | 169 | 7 | 24 | 339 | 24 | 338 | 2.45e-79 | 247 |
MS.gene006133.t1 | AT3G50990 | 42.715 | 302 | 164 | 5 | 38 | 332 | 38 | 337 | 5.05e-79 | 246 |
MS.gene006133.t1 | AT4G11290 | 41.840 | 337 | 170 | 8 | 9 | 336 | 7 | 326 | 5.54e-79 | 245 |
MS.gene006133.t1 | AT5G06720 | 41.000 | 300 | 167 | 5 | 41 | 332 | 32 | 329 | 9.96e-79 | 244 |
MS.gene006133.t1 | AT1G44970 | 39.655 | 348 | 196 | 6 | 1 | 336 | 1 | 346 | 1.34e-78 | 245 |
MS.gene006133.t1 | AT5G42180 | 41.196 | 301 | 164 | 5 | 38 | 332 | 20 | 313 | 5.51e-78 | 242 |
MS.gene006133.t1 | AT5G05340 | 41.137 | 299 | 169 | 4 | 41 | 336 | 30 | 324 | 2.50e-77 | 241 |
MS.gene006133.t1 | AT5G58400 | 38.906 | 329 | 181 | 5 | 7 | 332 | 10 | 321 | 2.57e-77 | 241 |
MS.gene006133.t1 | AT2G18980 | 40.909 | 308 | 169 | 6 | 37 | 336 | 21 | 323 | 3.61e-77 | 240 |
MS.gene006133.t1 | AT2G22420 | 42.475 | 299 | 161 | 5 | 45 | 337 | 27 | 320 | 3.77e-77 | 240 |
MS.gene006133.t1 | AT5G19890 | 41.830 | 306 | 160 | 7 | 41 | 336 | 30 | 327 | 7.38e-77 | 239 |
MS.gene006133.t1 | AT1G68850 | 39.181 | 342 | 182 | 10 | 10 | 336 | 5 | 335 | 1.30e-76 | 239 |
MS.gene006133.t1 | AT5G15180 | 41.558 | 308 | 170 | 5 | 35 | 336 | 26 | 329 | 1.33e-76 | 239 |
MS.gene006133.t1 | AT3G03670 | 40.323 | 310 | 172 | 5 | 35 | 336 | 17 | 321 | 2.51e-76 | 238 |
MS.gene006133.t1 | AT1G14550 | 39.939 | 328 | 181 | 6 | 11 | 336 | 8 | 321 | 5.12e-76 | 237 |
MS.gene006133.t1 | AT5G64120 | 39.458 | 332 | 185 | 8 | 12 | 336 | 6 | 328 | 6.47e-76 | 237 |
MS.gene006133.t1 | AT2G35380 | 43.038 | 316 | 156 | 9 | 36 | 336 | 29 | 335 | 1.31e-75 | 237 |
MS.gene006133.t1 | AT2G38390 | 43.789 | 322 | 153 | 9 | 28 | 336 | 27 | 333 | 1.35e-75 | 237 |
MS.gene006133.t1 | AT4G26010 | 39.934 | 303 | 172 | 5 | 35 | 336 | 16 | 309 | 2.40e-75 | 235 |
MS.gene006133.t1 | AT1G05240 | 42.434 | 304 | 163 | 6 | 41 | 336 | 26 | 325 | 3.05e-75 | 235 |
MS.gene006133.t1 | AT1G05250 | 42.434 | 304 | 163 | 6 | 41 | 336 | 26 | 325 | 3.05e-75 | 235 |
MS.gene006133.t1 | AT4G26010 | 39.934 | 303 | 172 | 5 | 35 | 336 | 44 | 337 | 3.15e-75 | 236 |
MS.gene006133.t1 | AT3G49110 | 41.424 | 309 | 169 | 6 | 41 | 339 | 33 | 339 | 3.18e-75 | 236 |
MS.gene006133.t1 | AT4G30170 | 39.474 | 304 | 171 | 5 | 41 | 336 | 27 | 325 | 3.55e-75 | 235 |
MS.gene006133.t1 | AT3G01190 | 42.763 | 304 | 162 | 5 | 39 | 336 | 24 | 321 | 4.03e-75 | 235 |
MS.gene006133.t1 | AT5G17820 | 42.088 | 297 | 156 | 5 | 41 | 332 | 24 | 309 | 4.19e-75 | 234 |
MS.gene006133.t1 | AT5G17820 | 42.321 | 293 | 153 | 5 | 45 | 332 | 81 | 362 | 6.05e-74 | 233 |
MS.gene006133.t1 | AT4G37530 | 40.132 | 304 | 173 | 4 | 41 | 336 | 27 | 329 | 8.40e-74 | 232 |
MS.gene006133.t1 | AT2G38380 | 42.857 | 322 | 156 | 9 | 28 | 336 | 27 | 333 | 3.02e-73 | 231 |
MS.gene006133.t1 | AT1G14540 | 41.946 | 298 | 168 | 5 | 41 | 336 | 21 | 315 | 9.00e-72 | 226 |
MS.gene006133.t1 | AT5G40150 | 40.268 | 298 | 175 | 2 | 41 | 336 | 32 | 328 | 1.61e-71 | 226 |
MS.gene006133.t1 | AT4G37520 | 39.145 | 304 | 176 | 4 | 41 | 336 | 27 | 329 | 6.10e-71 | 224 |
MS.gene006133.t1 | AT4G17690 | 39.542 | 306 | 179 | 3 | 34 | 337 | 22 | 323 | 8.50e-71 | 224 |
MS.gene006133.t1 | AT5G58390 | 40.878 | 296 | 167 | 5 | 41 | 332 | 21 | 312 | 2.07e-70 | 223 |
MS.gene006133.t1 | AT5G39580 | 40.789 | 304 | 167 | 6 | 39 | 336 | 23 | 319 | 2.10e-70 | 223 |
MS.gene006133.t1 | AT2G34060 | 37.389 | 337 | 200 | 5 | 8 | 334 | 9 | 344 | 4.82e-70 | 223 |
MS.gene006133.t1 | AT1G34510 | 38.614 | 303 | 176 | 5 | 35 | 336 | 16 | 309 | 4.87e-70 | 221 |
MS.gene006133.t1 | AT5G67400 | 39.672 | 305 | 173 | 6 | 41 | 336 | 27 | 329 | 2.48e-69 | 220 |
MS.gene006133.t1 | AT4G37520 | 38.487 | 304 | 175 | 5 | 41 | 336 | 27 | 326 | 3.78e-68 | 217 |
MS.gene006133.t1 | AT3G49960 | 38.689 | 305 | 176 | 6 | 41 | 336 | 27 | 329 | 5.00e-68 | 217 |
MS.gene006133.t1 | AT3G28200 | 40.000 | 300 | 172 | 5 | 41 | 336 | 21 | 316 | 2.04e-67 | 215 |
MS.gene006133.t1 | AT2G41480 | 40.461 | 304 | 161 | 8 | 45 | 336 | 33 | 328 | 7.31e-67 | 214 |
MS.gene006133.t1 | AT5G19880 | 39.274 | 303 | 171 | 6 | 41 | 332 | 25 | 325 | 8.20e-67 | 214 |
MS.gene006133.t1 | AT2G24800 | 40.909 | 308 | 167 | 6 | 38 | 336 | 28 | 329 | 1.92e-66 | 213 |
MS.gene006133.t1 | AT4G33870 | 35.329 | 334 | 172 | 5 | 41 | 333 | 68 | 398 | 3.74e-66 | 214 |
MS.gene006133.t1 | AT5G64110 | 40.728 | 302 | 160 | 7 | 45 | 336 | 38 | 330 | 8.07e-66 | 211 |
MS.gene006133.t1 | AT4G21960 | 35.556 | 315 | 193 | 4 | 28 | 338 | 21 | 329 | 9.18e-66 | 211 |
MS.gene006133.t1 | AT5G24070 | 37.427 | 342 | 191 | 8 | 10 | 338 | 6 | 337 | 4.08e-64 | 207 |
MS.gene006133.t1 | AT2G39040 | 40.777 | 309 | 166 | 8 | 41 | 336 | 46 | 350 | 8.66e-63 | 204 |
MS.gene006133.t1 | AT4G31760 | 36.667 | 330 | 186 | 6 | 15 | 336 | 12 | 326 | 1.54e-62 | 203 |
MS.gene006133.t1 | AT5G47000 | 37.288 | 295 | 181 | 3 | 41 | 332 | 33 | 326 | 1.05e-61 | 201 |
MS.gene006133.t1 | AT1G77100 | 36.937 | 333 | 184 | 9 | 10 | 336 | 7 | 319 | 1.30e-61 | 200 |
MS.gene006133.t1 | AT5G22410 | 39.934 | 303 | 162 | 9 | 41 | 332 | 28 | 321 | 2.61e-61 | 200 |
MS.gene006133.t1 | AT5G64100 | 39.667 | 300 | 164 | 7 | 45 | 336 | 41 | 331 | 8.77e-61 | 198 |
MS.gene006133.t1 | AT4G37530 | 40.467 | 257 | 144 | 4 | 41 | 289 | 27 | 282 | 1.24e-60 | 196 |
MS.gene006133.t1 | AT3G17070 | 35.430 | 302 | 185 | 4 | 39 | 332 | 36 | 335 | 2.44e-60 | 197 |
MS.gene006133.t1 | AT2G43480 | 35.882 | 340 | 189 | 9 | 13 | 332 | 1 | 331 | 1.76e-59 | 195 |
MS.gene006133.t1 | AT1G24110 | 35.556 | 315 | 188 | 6 | 32 | 336 | 13 | 322 | 1.05e-58 | 193 |
MS.gene006133.t1 | AT1G30870 | 36.825 | 315 | 180 | 8 | 36 | 342 | 46 | 349 | 3.31e-58 | 192 |
MS.gene006133.t1 | AT2G37130 | 34.437 | 302 | 188 | 5 | 41 | 336 | 30 | 327 | 4.78e-58 | 191 |
MS.gene006133.t1 | AT2G37130 | 34.564 | 298 | 185 | 5 | 45 | 336 | 3 | 296 | 7.28e-58 | 190 |
MS.gene006133.t1 | AT4G25980 | 36.482 | 307 | 178 | 6 | 41 | 336 | 26 | 326 | 8.29e-58 | 191 |
MS.gene006133.t1 | AT2G35380 | 42.400 | 250 | 124 | 8 | 102 | 336 | 3 | 247 | 3.15e-55 | 181 |
MS.gene006133.t1 | AT3G17070 | 32.946 | 258 | 162 | 5 | 83 | 332 | 18 | 272 | 2.86e-41 | 146 |
MS.gene006133.t1 | AT5G39580 | 38.806 | 201 | 112 | 4 | 39 | 239 | 23 | 212 | 8.71e-39 | 138 |
MS.gene006133.t1 | AT4G25980 | 40.588 | 170 | 95 | 3 | 41 | 210 | 71 | 234 | 4.55e-35 | 130 |
MS.gene006133.t1 | AT2G24800 | 42.690 | 171 | 92 | 3 | 38 | 208 | 28 | 192 | 9.66e-33 | 122 |
MS.gene006133.t1 | AT3G42570 | 29.907 | 107 | 73 | 1 | 102 | 208 | 43 | 147 | 6.41e-11 | 60.5 |
Find 70 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTTGCTGCTATGCTTAAAA+TGG | 0.176723 | 1.4:-76322298 | MS.gene006133:CDS |
AAGTAGGACAAGTTTGTTTA+AGG | 0.199321 | 1.4:+76322505 | None:intergenic |
TCCATGACAGGGTCTTGTTT+TGG | 0.232885 | 1.4:+76322546 | None:intergenic |
CTTCCATGACTGCTTTGTTC+AGG | 0.336694 | 1.4:-76323309 | MS.gene006133:intron |
ATTGTTGTTGTGTTGCTTGA+TGG | 0.350284 | 1.4:+76322678 | None:intergenic |
TTGTGATGGATCAGTATTAT+TGG | 0.364319 | 1.4:-76323060 | MS.gene006133:CDS |
CTTCACTATAGGAGGAGGTT+TGG | 0.382309 | 1.4:+76323451 | None:intergenic |
CACCACCAAACTTGAGTCTT+AGG | 0.384280 | 1.4:-76323004 | MS.gene006133:CDS |
CAATGGCTTATGCTTCTTGT+AGG | 0.384357 | 1.4:-76323547 | MS.gene006133:CDS |
CTACTACATCTGTAGGGTTA+AGG | 0.401776 | 1.4:+76322631 | None:intergenic |
CTGATGATAGATTCAAGCTT+AGG | 0.402937 | 1.4:+76323395 | None:intergenic |
ATTAGCACGAATTTCTCCTT+TGG | 0.416931 | 1.4:+76322251 | None:intergenic |
TTCGTGCTAATTGCTCTGTT+AGG | 0.418468 | 1.4:-76322239 | MS.gene006133:CDS |
GGTGGTGCATCTTTCTCACT+TGG | 0.424168 | 1.4:+76323020 | None:intergenic |
CATGATAGTCCCTTCACTAT+AGG | 0.430598 | 1.4:+76323440 | None:intergenic |
TTCGATTATCTTGAAGGCCT+CGG | 0.436787 | 1.4:+76322980 | None:intergenic |
GTATTTGTTATCAAATTTGT+TGG | 0.437290 | 1.4:+76322443 | None:intergenic |
TATTTGTTATCAAATTTGTT+GGG | 0.439495 | 1.4:+76322444 | None:intergenic |
TCTTATCAGTGTATAAATCT+TGG | 0.449979 | 1.4:+76322379 | None:intergenic |
TGTTGATCTTATGAACCGTC+AGG | 0.452596 | 1.4:-76322418 | MS.gene006133:CDS |
AAAGGTATGGATTAGAAGAA+AGG | 0.455618 | 1.4:+76323511 | None:intergenic |
CTCTCAGGTGGTCACACAAT+AGG | 0.463629 | 1.4:-76322606 | MS.gene006133:CDS |
AAGATTTATACACTGATAAG+AGG | 0.464368 | 1.4:-76322377 | MS.gene006133:CDS |
GATGATGTTGGTCAAGCTGC+TGG | 0.480697 | 1.4:-76323347 | MS.gene006133:CDS |
TAATCCATCTCTCCTTCCTA+AGG | 0.488025 | 1.4:+76322743 | None:intergenic |
AACTGTGGTGTTATCAGTGT+TGG | 0.488314 | 1.4:+76322482 | None:intergenic |
GTTGCTGCTATGCTTAAAAT+GGG | 0.493223 | 1.4:-76322297 | MS.gene006133:CDS |
TCGGTCCTAAGACTCAAGTT+TGG | 0.499279 | 1.4:+76322999 | None:intergenic |
CAAATCTTTCCTTACTTCTG+TGG | 0.502716 | 1.4:-76322205 | MS.gene006133:CDS |
ATGAAAATGCAGGGTTGTGA+TGG | 0.506653 | 1.4:-76323074 | MS.gene006133:intron |
CATCTTCCACCACAGAAGTA+AGG | 0.507687 | 1.4:+76322196 | None:intergenic |
GATGTGAGAAAATGAAAGAA+AGG | 0.511303 | 1.4:+76323493 | None:intergenic |
ACAGATGTAGTAGCACTCTC+AGG | 0.517970 | 1.4:-76322621 | MS.gene006133:CDS |
GAGAAAATGAAAGAAAGGTA+TGG | 0.521173 | 1.4:+76323498 | None:intergenic |
AACAGCATCACGAGCGGCAA+TGG | 0.523212 | 1.4:+76322896 | None:intergenic |
ATCTTTCCTTACTTCTGTGG+TGG | 0.523496 | 1.4:-76322202 | MS.gene006133:CDS |
TGGATTAACATTTGCAACAC+AGG | 0.523958 | 1.4:-76322727 | MS.gene006133:CDS |
CCAGACTACAAAATTCCCTT+AGG | 0.524500 | 1.4:-76322759 | MS.gene006133:CDS |
CTATAGTGAAGGGACTATCA+TGG | 0.530164 | 1.4:-76323439 | MS.gene006133:CDS |
GTCCTAAGACTCAAGTTTGG+TGG | 0.530334 | 1.4:+76323002 | None:intergenic |
AAGATCTTCAATGATGATGT+TGG | 0.544356 | 1.4:-76323359 | MS.gene006133:CDS |
CAAAGCAGTCATGGAAGTGA+AGG | 0.552183 | 1.4:+76323315 | None:intergenic |
GAGAGTGCTACTACATCTGT+AGG | 0.561499 | 1.4:+76322624 | None:intergenic |
CCTGTCATGGACAAAACCTA+TGG | 0.564791 | 1.4:-76322534 | MS.gene006133:CDS |
ATACACTGATAAGAGGACTA+AGG | 0.565750 | 1.4:-76322370 | MS.gene006133:CDS |
AGTCCCTTCACTATAGGAGG+AGG | 0.565917 | 1.4:+76323446 | None:intergenic |
TTACCTGAACAAAGCAGTCA+TGG | 0.566092 | 1.4:+76323306 | None:intergenic |
GTGTTATCAGTGTTGGAAGT+AGG | 0.569777 | 1.4:+76322489 | None:intergenic |
GATAGTCCCTTCACTATAGG+AGG | 0.573316 | 1.4:+76323443 | None:intergenic |
CCGTCAGGGTCTCTTTACTT+CGG | 0.573471 | 1.4:-76322403 | MS.gene006133:CDS |
ATTCCCTTAGGAAGGAGAGA+TGG | 0.574750 | 1.4:-76322747 | MS.gene006133:CDS |
TACTTCTGTGGTGGAAGATG+CGG | 0.576534 | 1.4:-76322193 | MS.gene006133:CDS |
ACTACAAAATTCCCTTAGGA+AGG | 0.582731 | 1.4:-76322755 | MS.gene006133:CDS |
CAAACCTCCTCCTATAGTGA+AGG | 0.591712 | 1.4:-76323450 | MS.gene006133:CDS |
AATCCATCTCTCCTTCCTAA+GGG | 0.592767 | 1.4:+76322744 | None:intergenic |
GATGGATCAGTATTATTGGA+TGG | 0.596952 | 1.4:-76323056 | MS.gene006133:CDS |
TTCTGTGGTGGAAGATGCGG+TGG | 0.600054 | 1.4:-76322190 | MS.gene006133:CDS |
GTTGTGTTGCTTGATGGTGA+AGG | 0.611201 | 1.4:+76322684 | None:intergenic |
AGAGTGCTACTACATCTGTA+GGG | 0.620697 | 1.4:+76322625 | None:intergenic |
CCCAAAACAAGACCCTGTCA+TGG | 0.624304 | 1.4:-76322547 | MS.gene006133:CDS |
AAACCTCCTCCTATAGTGAA+GGG | 0.624659 | 1.4:-76323449 | MS.gene006133:CDS |
GTTGATCTTATGAACCGTCA+GGG | 0.657466 | 1.4:-76322417 | MS.gene006133:CDS |
TGTTTGTGAAAGAACTGCAG+TGG | 0.657795 | 1.4:+76322577 | None:intergenic |
ACTACGAATATCTAGAACTG+TGG | 0.661587 | 1.4:+76322467 | None:intergenic |
ATTAACATTTGCAACACAGG+AGG | 0.668426 | 1.4:-76322724 | MS.gene006133:CDS |
GATGTAGTAGCACTCTCAGG+TGG | 0.686682 | 1.4:-76322618 | MS.gene006133:CDS |
AGTAATATAGAGAAGCAGTG+TGG | 0.694261 | 1.4:-76322948 | MS.gene006133:CDS |
TAGGAAAACAGCATCACGAG+CGG | 0.695239 | 1.4:+76322890 | None:intergenic |
AAACTTGAGTCTTAGGACCG+AGG | 0.714645 | 1.4:-76322997 | MS.gene006133:CDS |
CCGAAGTAAAGAGACCCTGA+CGG | 0.722315 | 1.4:+76322403 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATTATATTTGGTTATTTA+TGG | - | chr1.4:76322610-76322629 | MS.gene006133:CDS | 10.0% |
!! | AAATCCAAACTTATTATATT+TGG | - | chr1.4:76322600-76322619 | MS.gene006133:CDS | 15.0% |
!! | AACTATAAACAATACTAATT+AGG | - | chr1.4:76322474-76322493 | MS.gene006133:CDS | 15.0% |
!! | ATAACCAAATATAATAAGTT+TGG | + | chr1.4:76322607-76322626 | None:intergenic | 15.0% |
!!! | TATTTGTTATCAAATTTGTT+GGG | + | chr1.4:76323274-76323293 | None:intergenic | 15.0% |
!! | AAAATAAAGGTTTACTTACT+AGG | + | chr1.4:76322847-76322866 | None:intergenic | 20.0% |
!! | GTATATTTAGCTAATTAGTT+AGG | - | chr1.4:76322443-76322462 | MS.gene006133:CDS | 20.0% |
!! | GTTAAAAAAATGAAAATGCA+GGG | - | chr1.4:76322632-76322651 | MS.gene006133:CDS | 20.0% |
!!! | GTATTTGTTATCAAATTTGT+TGG | + | chr1.4:76323275-76323294 | None:intergenic | 20.0% |
! | AAGATTTATACACTGATAAG+AGG | - | chr1.4:76323338-76323357 | MS.gene006133:CDS | 25.0% |
! | GGTTAAAAAAATGAAAATGC+AGG | - | chr1.4:76322631-76322650 | MS.gene006133:CDS | 25.0% |
! | TCTTATCAGTGTATAAATCT+TGG | + | chr1.4:76323339-76323358 | None:intergenic | 25.0% |
!!! | AAGTTTTTCGATTATCTTGA+AGG | + | chr1.4:76322744-76322763 | None:intergenic | 25.0% |
!!! | CAATGTTTTATTGACATATG+TGG | - | chr1.4:76322540-76322559 | MS.gene006133:CDS | 25.0% |
CCAACTTCTCACAAAAATAA+AGG | + | chr1.4:76322860-76322879 | None:intergenic | 30.0% | |
GAGAAAATGAAAGAAAGGTA+TGG | + | chr1.4:76322220-76322239 | None:intergenic | 30.0% | |
GATGTGAGAAAATGAAAGAA+AGG | + | chr1.4:76322225-76322244 | None:intergenic | 30.0% | |
TGAATCTGTTTAGCTAACTT+TGG | - | chr1.4:76322577-76322596 | MS.gene006133:CDS | 30.0% | |
! | AAGATCTTCAATGATGATGT+TGG | - | chr1.4:76322356-76322375 | MS.gene006133:CDS | 30.0% |
! | AAGTAGGACAAGTTTGTTTA+AGG | + | chr1.4:76323213-76323232 | None:intergenic | 30.0% |
! | ATAGAAGCTGTACATTTTCA+CGG | + | chr1.4:76322519-76322538 | None:intergenic | 30.0% |
!! | AAAGGTATGGATTAGAAGAA+AGG | + | chr1.4:76322207-76322226 | None:intergenic | 30.0% |
!! | TTGTGATGGATCAGTATTAT+TGG | - | chr1.4:76322655-76322674 | MS.gene006133:CDS | 30.0% |
!! | TTGTTTAAGGTTTTTGCCAT+AGG | + | chr1.4:76323200-76323219 | None:intergenic | 30.0% |
!!! | CCTTTATTTTTGTGAGAAGT+TGG | - | chr1.4:76322857-76322876 | MS.gene006133:intron | 30.0% |
ACTACAAAATTCCCTTAGGA+AGG | - | chr1.4:76322960-76322979 | MS.gene006133:CDS | 35.0% | |
AGTAATATAGAGAAGCAGTG+TGG | - | chr1.4:76322767-76322786 | MS.gene006133:CDS | 35.0% | |
ATACACTGATAAGAGGACTA+AGG | - | chr1.4:76323345-76323364 | MS.gene006133:CDS | 35.0% | |
ATTAACATTTGCAACACAGG+AGG | - | chr1.4:76322991-76323010 | MS.gene006133:CDS | 35.0% | |
ATTAGCACGAATTTCTCCTT+TGG | + | chr1.4:76323467-76323486 | None:intergenic | 35.0% | |
CAAATCTTTCCTTACTTCTG+TGG | - | chr1.4:76323510-76323529 | MS.gene006133:CDS | 35.0% | |
CTGATGATAGATTCAAGCTT+AGG | + | chr1.4:76322323-76322342 | None:intergenic | 35.0% | |
GATGGATCAGTATTATTGGA+TGG | - | chr1.4:76322659-76322678 | MS.gene006133:CDS | 35.0% | |
GTTGCTGCTATGCTTAAAAT+GGG | - | chr1.4:76323418-76323437 | MS.gene006133:CDS | 35.0% | |
TGGATTAACATTTGCAACAC+AGG | - | chr1.4:76322988-76323007 | MS.gene006133:CDS | 35.0% | |
TGTTGCTGCTATGCTTAAAA+TGG | - | chr1.4:76323417-76323436 | MS.gene006133:CDS | 35.0% | |
! | ACTACGAATATCTAGAACTG+TGG | + | chr1.4:76323251-76323270 | None:intergenic | 35.0% |
! | AGGACATTTTGAATCGTAGA+AGG | + | chr1.4:76322303-76322322 | None:intergenic | 35.0% |
!! | ATTGTTGTTGTGTTGCTTGA+TGG | + | chr1.4:76323040-76323059 | None:intergenic | 35.0% |
!! | CATGTTTTTACATTGCAGTC+AGG | - | chr1.4:76322929-76322948 | MS.gene006133:CDS | 35.0% |
!!! | AATGTTTTGACTGGAACCAA+AGG | - | chr1.4:76323448-76323467 | MS.gene006133:CDS | 35.0% |
!!! | TGTAGGGTTAAGGTTTTTTG+TGG | + | chr1.4:76323077-76323096 | None:intergenic | 35.0% |
AAACCTCCTCCTATAGTGAA+GGG | - | chr1.4:76322266-76322285 | MS.gene006133:CDS | 40.0% | |
AATCCATCTCTCCTTCCTAA+GGG | + | chr1.4:76322974-76322993 | None:intergenic | 40.0% | |
ATCTTTCCTTACTTCTGTGG+TGG | - | chr1.4:76323513-76323532 | MS.gene006133:CDS | 40.0% | |
ATGAAAATGCAGGGTTGTGA+TGG | - | chr1.4:76322641-76322660 | MS.gene006133:CDS | 40.0% | |
CATGATAGTCCCTTCACTAT+AGG | + | chr1.4:76322278-76322297 | None:intergenic | 40.0% | |
CCAGACTACAAAATTCCCTT+AGG | - | chr1.4:76322956-76322975 | MS.gene006133:CDS | 40.0% | |
CTACTACATCTGTAGGGTTA+AGG | + | chr1.4:76323087-76323106 | None:intergenic | 40.0% | |
CTATAGTGAAGGGACTATCA+TGG | - | chr1.4:76322276-76322295 | MS.gene006133:CDS | 40.0% | |
GTTGATCTTATGAACCGTCA+GGG | - | chr1.4:76323298-76323317 | MS.gene006133:intron | 40.0% | |
TAATCCATCTCTCCTTCCTA+AGG | + | chr1.4:76322975-76322994 | None:intergenic | 40.0% | |
TGTTGATCTTATGAACCGTC+AGG | - | chr1.4:76323297-76323316 | MS.gene006133:intron | 40.0% | |
TGTTTGTGAAAGAACTGCAG+TGG | + | chr1.4:76323141-76323160 | None:intergenic | 40.0% | |
TTACCTGAACAAAGCAGTCA+TGG | + | chr1.4:76322412-76322431 | None:intergenic | 40.0% | |
TTCGATTATCTTGAAGGCCT+CGG | + | chr1.4:76322738-76322757 | None:intergenic | 40.0% | |
TTCGTGCTAATTGCTCTGTT+AGG | - | chr1.4:76323476-76323495 | MS.gene006133:CDS | 40.0% | |
! | AGAGTGCTACTACATCTGTA+GGG | + | chr1.4:76323093-76323112 | None:intergenic | 40.0% |
! | CCTAAGGGAATTTTGTAGTC+TGG | + | chr1.4:76322959-76322978 | None:intergenic | 40.0% |
! | GTGTTATCAGTGTTGGAAGT+AGG | + | chr1.4:76323229-76323248 | None:intergenic | 40.0% |
! | GTTTTTACATTGCAGTCAGG+AGG | - | chr1.4:76322932-76322951 | MS.gene006133:CDS | 40.0% |
!! | AACTGTGGTGTTATCAGTGT+TGG | + | chr1.4:76323236-76323255 | None:intergenic | 40.0% |
!! | CATAGGTTTTGTCCATGACA+GGG | + | chr1.4:76323183-76323202 | None:intergenic | 40.0% |
!!! | GGACAGCTTAATGTTTTGAC+TGG | - | chr1.4:76323439-76323458 | MS.gene006133:CDS | 40.0% |
AAACTTGAGTCTTAGGACCG+AGG | - | chr1.4:76322718-76322737 | MS.gene006133:CDS | 45.0% | |
ACAGATGTAGTAGCACTCTC+AGG | - | chr1.4:76323094-76323113 | MS.gene006133:intron | 45.0% | |
ATTCCCTTAGGAAGGAGAGA+TGG | - | chr1.4:76322968-76322987 | MS.gene006133:CDS | 45.0% | |
CAAACCTCCTCCTATAGTGA+AGG | - | chr1.4:76322265-76322284 | MS.gene006133:CDS | 45.0% | |
CAAAGCAGTCATGGAAGTGA+AGG | + | chr1.4:76322403-76322422 | None:intergenic | 45.0% | |
CACCACCAAACTTGAGTCTT+AGG | - | chr1.4:76322711-76322730 | MS.gene006133:CDS | 45.0% | |
CATCTTCCACCACAGAAGTA+AGG | + | chr1.4:76323522-76323541 | None:intergenic | 45.0% | |
CCTGTCATGGACAAAACCTA+TGG | - | chr1.4:76323181-76323200 | MS.gene006133:intron | 45.0% | |
CTTCACTATAGGAGGAGGTT+TGG | + | chr1.4:76322267-76322286 | None:intergenic | 45.0% | |
GATAGTCCCTTCACTATAGG+AGG | + | chr1.4:76322275-76322294 | None:intergenic | 45.0% | |
GTCCTAAGACTCAAGTTTGG+TGG | + | chr1.4:76322716-76322735 | None:intergenic | 45.0% | |
TAGGAAAACAGCATCACGAG+CGG | + | chr1.4:76322828-76322847 | None:intergenic | 45.0% | |
TCGGTCCTAAGACTCAAGTT+TGG | + | chr1.4:76322719-76322738 | None:intergenic | 45.0% | |
! | CTTCCATGACTGCTTTGTTC+AGG | - | chr1.4:76322406-76322425 | MS.gene006133:CDS | 45.0% |
! | TACTTCTGTGGTGGAAGATG+CGG | - | chr1.4:76323522-76323541 | MS.gene006133:CDS | 45.0% |
!! | CCATAGGTTTTGTCCATGAC+AGG | + | chr1.4:76323184-76323203 | None:intergenic | 45.0% |
!! | GAGAGTGCTACTACATCTGT+AGG | + | chr1.4:76323094-76323113 | None:intergenic | 45.0% |
!! | GTTGTGTTGCTTGATGGTGA+AGG | + | chr1.4:76323034-76323053 | None:intergenic | 45.0% |
!!! | CCATGACAGGGTCTTGTTTT+GGG | + | chr1.4:76323171-76323190 | None:intergenic | 45.0% |
!!! | TCCATGACAGGGTCTTGTTT+TGG | + | chr1.4:76323172-76323191 | None:intergenic | 45.0% |
AGTCCCTTCACTATAGGAGG+AGG | + | chr1.4:76322272-76322291 | None:intergenic | 50.0% | |
CCCAAAACAAGACCCTGTCA+TGG | - | chr1.4:76323168-76323187 | MS.gene006133:intron | 50.0% | |
CCGAAGTAAAGAGACCCTGA+CGG | + | chr1.4:76323315-76323334 | None:intergenic | 50.0% | |
CCGTCAGGGTCTCTTTACTT+CGG | - | chr1.4:76323312-76323331 | MS.gene006133:CDS | 50.0% | |
CTCTCAGGTGGTCACACAAT+AGG | - | chr1.4:76323109-76323128 | MS.gene006133:intron | 50.0% | |
GATGATGTTGGTCAAGCTGC+TGG | - | chr1.4:76322368-76322387 | MS.gene006133:CDS | 50.0% | |
GATGTAGTAGCACTCTCAGG+TGG | - | chr1.4:76323097-76323116 | MS.gene006133:intron | 50.0% | |
GGTGGTGCATCTTTCTCACT+TGG | + | chr1.4:76322698-76322717 | None:intergenic | 50.0% | |
AACAGCATCACGAGCGGCAA+TGG | + | chr1.4:76322822-76322841 | None:intergenic | 55.0% | |
! | TTCTGTGGTGGAAGATGCGG+TGG | - | chr1.4:76323525-76323544 | MS.gene006133:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 76322170 | 76323567 | 76322170 | ID=MS.gene006133 |
chr1.4 | mRNA | 76322170 | 76323567 | 76322170 | ID=MS.gene006133.t1;Parent=MS.gene006133 |
chr1.4 | exon | 76323310 | 76323567 | 76323310 | ID=MS.gene006133.t1.exon1;Parent=MS.gene006133.t1 |
chr1.4 | CDS | 76323310 | 76323567 | 76323310 | ID=cds.MS.gene006133.t1;Parent=MS.gene006133.t1 |
chr1.4 | exon | 76322890 | 76323084 | 76322890 | ID=MS.gene006133.t1.exon2;Parent=MS.gene006133.t1 |
chr1.4 | CDS | 76322890 | 76323084 | 76322890 | ID=cds.MS.gene006133.t1;Parent=MS.gene006133.t1 |
chr1.4 | exon | 76322170 | 76322790 | 76322170 | ID=MS.gene006133.t1.exon3;Parent=MS.gene006133.t1 |
chr1.4 | CDS | 76322170 | 76322790 | 76322170 | ID=cds.MS.gene006133.t1;Parent=MS.gene006133.t1 |
Gene Sequence |
Protein sequence |