AlfalfaGEDB | MS.gene68979

M. sativa cultivar XinJiangDaYe / MS.gene68979

KEGG: K11129
GO: GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005730 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0097159 GO:0110165 GO:1901363
PFAM: PF01248.29

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68979.t1	AFK35508.1	96.8	157	1	1	1	157	1	153	3.10E-69	271.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68979.t1	Q9LEY9	62.8	156	57	1	1	156	1	155	1.1e-46	187.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68979.t1	G7JT47	96.8	157	1	1	1	157	1	153	2.2e-69	271.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050427	MS.gene68979	0.803808	2.92E-49	-1.69E-46
MS.gene053007	MS.gene68979	0.802127	6.50E-49	-1.69E-46
MS.gene053230	MS.gene68979	0.843712	1.18E-58	-1.69E-46
MS.gene055808	MS.gene68979	0.825584	4.33E-54	-1.69E-46
MS.gene056215	MS.gene68979	0.808723	2.69E-50	-1.69E-46
MS.gene060429	MS.gene68979	0.864824	9.21E-65	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene68979	MS.gene31515	PPI
MS.gene68979	MS.gene067951	PPI
MS.gene02109	MS.gene68979	PPI
MS.gene68979	MS.gene93333	PPI
MS.gene68979	MS.gene072432	PPI
MS.gene68979	MS.gene64659	PPI
MS.gene68979	MS.gene040757	PPI
MS.gene68979	MS.gene45344	PPI
MS.gene68979	MS.gene028023	PPI
MS.gene68979	MS.gene038837	PPI
MS.gene68979	MS.gene75111	PPI
MS.gene68979	MS.gene98436	PPI
MS.gene68979	MS.gene003314	PPI
MS.gene68979	MS.gene001986	PPI
MS.gene68979	MS.gene056443	PPI
MS.gene038837	MS.gene68979	PPI
MS.gene68979	MS.gene003501	PPI
MS.gene68979	MS.gene99649	PPI
MS.gene68979	MS.gene030258	PPI
MS.gene68979	MS.gene78324	PPI
MS.gene68979	MS.gene072433	PPI
MS.gene68979	MS.gene93859	PPI
MS.gene68979	MS.gene90954	PPI
MS.gene68979	MS.gene50177	PPI
MS.gene68979	MS.gene32569	PPI
MS.gene68979	MS.gene000714	PPI
MS.gene68979	MS.gene066537	PPI
MS.gene68979	MS.gene51868	PPI
MS.gene68979	MS.gene29300	PPI
MS.gene68979	MS.gene41916	PPI
MS.gene68979	MS.gene64512	PPI
MS.gene68979	MS.gene80570	PPI
MS.gene68979	MS.gene002038	PPI
MS.gene61498	MS.gene68979	PPI
MS.gene68979	MS.gene29299	PPI
MS.gene045843	MS.gene68979	PPI
MS.gene68979	MS.gene066535	PPI
MS.gene81498	MS.gene68979	PPI
MS.gene68979	MS.gene020215	PPI
MS.gene68979	MS.gene72894	PPI
MS.gene020385	MS.gene68979	PPI
MS.gene044537	MS.gene68979	PPI
MS.gene064180	MS.gene68979	PPI
MS.gene68979	MS.gene81001	PPI
MS.gene68979	MS.gene067362	PPI
MS.gene68979	MS.gene29298	PPI
MS.gene68979	MS.gene038784	PPI
MS.gene68979	MS.gene78322	PPI
MS.gene68979	MS.gene90957	PPI
MS.gene68979	MS.gene066536	PPI
MS.gene68979	MS.gene072064	PPI
MS.gene68979	MS.gene66284	PPI
MS.gene68979	MS.gene62426	PPI
MS.gene68979	MS.gene037324	PPI
MS.gene68979	MS.gene061905	PPI
MS.gene68979	MS.gene23466	PPI
MS.gene68979	MS.gene61498	PPI
MS.gene68979	MS.gene054186	PPI
MS.gene68979	MS.gene045843	PPI
MS.gene96983	MS.gene68979	PPI
MS.gene68979	MS.gene056257	PPI
MS.gene032998	MS.gene68979	PPI
MS.gene68979	MS.gene047206	PPI
MS.gene68979	MS.gene64804	PPI
MS.gene68979	MS.gene029415	PPI
MS.gene68979	MS.gene035486	PPI
MS.gene95758	MS.gene68979	PPI
MS.gene97932	MS.gene68979	PPI
MS.gene68979	MS.gene067809	PPI
MS.gene68979	MS.gene29479	PPI
MS.gene059422	MS.gene68979	PPI
MS.gene036800	MS.gene68979	PPI
MS.gene68979	MS.gene00612	PPI
MS.gene68979	MS.gene45646	PPI
MS.gene68979	MS.gene91415	PPI
MS.gene68979	MS.gene072431	PPI
MS.gene08205	MS.gene68979	PPI
MS.gene68979	MS.gene045818	PPI
MS.gene68979	MS.gene52097	PPI
MS.gene68979	MS.gene74532	PPI
MS.gene68979	MS.gene78323	PPI
MS.gene68979	MS.gene49958	PPI
MS.gene68979	MS.gene046040	PPI
MS.gene59047	MS.gene68979	PPI
MS.gene018553	MS.gene68979	PPI
MS.gene68979	MS.gene67483	PPI
MS.gene68979	MS.gene99744	PPI
MS.gene68979	MS.gene073734	PPI
MS.gene68979	MS.gene057730	PPI
MS.gene68979	MS.gene09845	PPI
MS.gene68979	MS.gene80786	PPI
MS.gene68979	MS.gene029242	PPI
MS.gene59503	MS.gene68979	PPI
MS.gene68979	MS.gene018682	PPI
MS.gene68979	MS.gene39294	PPI
MS.gene68979	MS.gene022752	PPI
MS.gene68979	MS.gene065146	PPI
MS.gene68979	MS.gene03059	PPI
MS.gene68979	MS.gene07616	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68979.t1	MTR_4g112780	97.452	157	0	1	1	157	1	153	1.26e-106	301
MS.gene68979.t1	MTR_4g114330	34.483	116	75	1	21	136	4	118	2.17e-14	66.2
MS.gene68979.t1	MTR_5g077600	72.727	44	11	1	105	148	23	65	6.86e-14	63.2
MS.gene68979.t1	MTR_0011s0330	34.821	112	72	1	25	136	8	118	2.09e-13	63.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68979.t1	AT5G08180	68.153	157	49	1	1	157	1	156	4.91e-76	224
MS.gene68979.t1	AT5G08180	68.153	157	49	1	1	157	1	156	4.91e-76	224
MS.gene68979.t1	AT4G12600	34.188	117	76	1	20	136	3	118	5.16e-13	62.4
MS.gene68979.t1	AT5G20160	35.714	112	71	1	25	136	8	118	5.27e-13	62.4
MS.gene68979.t1	AT4G22380	34.821	112	72	1	25	136	8	118	9.05e-13	62.0

Find 31 sgRNAs with CRISPR-Local

Find 105 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGTATAAGGCGAGGTCAAAA+AGG	0.296737	8.1:+15284755	MS.gene68979:CDS
CCCATTGCAAAACCTCTTGC+TGG	0.348880	8.1:+15283905	MS.gene68979:CDS
TGAGATAGTTCACCCTTTGA+AGG	0.372203	8.1:-15285821	None:intergenic
CGCAGAGTGTGTATTATAGC+TGG	0.392404	8.1:+15284968	MS.gene68979:intron
AGGAGGTGGTTAAAAGTATA+AGG	0.394940	8.1:+15284741	MS.gene68979:CDS
GTGCATAAAGAGAGGAGTTA+AGG	0.402782	8.1:+15284721	MS.gene68979:CDS
TAGTTCACCCTTTGAAGGCT+TGG	0.444404	8.1:-15285816	None:intergenic
ACATGAGTGATGACATCAAT+AGG	0.449731	8.1:-15285001	None:intergenic
TCCTTATCCTCACATAAAAT+CGG	0.452854	8.1:-15285025	None:intergenic
TTAGATGAGACATATACATA+TGG	0.460404	8.1:-15285052	None:intergenic
GTCCAGGACCTTGCAACGGC+AGG	0.468819	8.1:+15285755	MS.gene68979:intron
CGACAGTGAAGGTGAGAAAT+CGG	0.483487	8.1:+15283841	MS.gene68979:CDS
GTGATGACCAAGCCTTCAAA+GGG	0.500756	8.1:+15285809	MS.gene68979:CDS
TCGTTGCTCCTGCCGTTGCA+AGG	0.501816	8.1:-15285763	None:intergenic
AGTGATGACCAAGCCTTCAA+AGG	0.525648	8.1:+15285808	MS.gene68979:CDS
ACACTCAAGCTTGTTAAAAG+AGG	0.527156	8.1:+15283947	MS.gene68979:CDS
AAAGAGAGGAGTTAAGGAGG+TGG	0.543156	8.1:+15284727	MS.gene68979:CDS
CGGTGCAGAGGGAGAAGGAG+AGG	0.549279	8.1:+15283861	MS.gene68979:CDS
CATAAAGAGAGGAGTTAAGG+AGG	0.557458	8.1:+15284724	MS.gene68979:CDS
GAAAGCTTCTTTCCAGCAAG+AGG	0.560382	8.1:-15283917	None:intergenic
ATCACTAAAACACAACAAGT+TGG	0.561953	8.1:-15285791	None:intergenic
GAAGGAGAGGAAGAAGATGC+AGG	0.571568	8.1:+15283874	MS.gene68979:CDS
GAAATCGGTGCAGAGGGAGA+AGG	0.585599	8.1:+15283856	MS.gene68979:CDS
AAGGTGAGAAATCGGTGCAG+AGG	0.589190	8.1:+15283849	MS.gene68979:CDS
GCAGAGTGTGTATTATAGCT+GGG	0.592201	8.1:+15284969	MS.gene68979:intron
AGGTGAGAAATCGGTGCAGA+GGG	0.594395	8.1:+15283850	MS.gene68979:CDS
AAAGGGTGAACTATCTCAAG+AGG	0.620179	8.1:+15285826	MS.gene68979:CDS
GAAAACAAGTGCATAAAGAG+AGG	0.625540	8.1:+15284713	MS.gene68979:CDS
ATTTGTCCAGGACCTTGCAA+CGG	0.636321	8.1:+15285751	MS.gene68979:intron
GAAATGGGAAGCGACAGTGA+AGG	0.681973	8.1:+15283830	None:intergenic
GTGGTTAAAAGTATAAGGCG+AGG	0.693539	8.1:+15284746	MS.gene68979:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ACAATTGAAACATAAAAAAT+GGG	-	chr8.1:15284907-15284926	None:intergenic	15.0%
!!	ATAGCTTATAAAAACAATTT+AGG	-	chr8.1:15284311-15284330	None:intergenic	15.0%
!!	TTATAAGCTATAAACTATAT+TGG	+	chr8.1:15284320-15284339	MS.gene68979:intron	15.0%
!!	TTCCAAAAAAAAAGAAAAAA+CGG	-	chr8.1:15284561-15284580	None:intergenic	15.0%
!!!	TTTTTTCTTTTTTTTTGGAA+TGG	+	chr8.1:15284561-15284580	MS.gene68979:intron	15.0%
!!	ATTCATAACATAACATTCTT+GGG	-	chr8.1:15284473-15284492	None:intergenic	20.0%
!!	CACAATTGAAACATAAAAAA+TGG	-	chr8.1:15284908-15284927	None:intergenic	20.0%
!!	CTATTGTATTCATAATATAC+AGG	-	chr8.1:15285490-15285509	None:intergenic	20.0%
!!	GAATTGTTGATATATTATGT+AGG	-	chr8.1:15285562-15285581	None:intergenic	20.0%
!!	TACATAAATCTTTGTCTTAT+GGG	+	chr8.1:15284655-15284674	MS.gene68979:intron	20.0%
!!	TCATAAATAACTAAAAGTTG+AGG	+	chr8.1:15285226-15285245	MS.gene68979:intron	20.0%
!!	TTACATAAATCTTTGTCTTA+TGG	+	chr8.1:15284654-15284673	MS.gene68979:intron	20.0%
!!	TTCCATTCAAATATGTTATA+TGG	-	chr8.1:15285350-15285369	None:intergenic	20.0%
!!!	CATTTTTTATGTTTCAATTG+TGG	+	chr8.1:15284906-15284925	MS.gene68979:intron	20.0%
!!!	GTTGATTCTGTAATTTAAAA+AGG	+	chr8.1:15284597-15284616	MS.gene68979:intron	20.0%
!!!	TAATGAAAATCGTTAATTTG+TGG	+	chr8.1:15284007-15284026	MS.gene68979:intron	20.0%
!!!	TTTCAGTTTCGTTTTAAATA+TGG	+	chr8.1:15285594-15285613	MS.gene68979:intron	20.0%
!	AATAAGTTGTTTATCCAAAC+AGG	-	chr8.1:15284187-15284206	None:intergenic	25.0%
!	ATATGGTATTAAGAGAAACA+TGG	+	chr8.1:15285611-15285630	MS.gene68979:intron	25.0%
!	ATTTATCTTCCTTGACAAAA+TGG	+	chr8.1:15284854-15284873	MS.gene68979:intron	25.0%
!	GATTCATAACATAACATTCT+TGG	-	chr8.1:15284474-15284493	None:intergenic	25.0%
!	GTCCATATAACATATTTGAA+TGG	+	chr8.1:15285345-15285364	MS.gene68979:intron	25.0%
!	TTAGATGAGACATATACATA+TGG	-	chr8.1:15285055-15285074	None:intergenic	25.0%
!	TTCATAACATAACATTCTTG+GGG	-	chr8.1:15284472-15284491	None:intergenic	25.0%
!!	CTTATTCTAAAGAGAGATTA+GGG	-	chr8.1:15285152-15285171	None:intergenic	25.0%
!!	TACATTTTGTAAGTCTGTTT+TGG	-	chr8.1:15284411-15284430	None:intergenic	25.0%
!!	TCTTATTCTAAAGAGAGATT+AGG	-	chr8.1:15285153-15285172	None:intergenic	25.0%
!!	TTTCAAAGTACTAGAGTAAT+TGG	-	chr8.1:15285707-15285726	None:intergenic	25.0%
!!!	AATTTTTGAGATATTTGTCC+AGG	+	chr8.1:15285739-15285758	MS.gene68979:intron	25.0%
!!!	ATGAACTTGTTATGGAATTA+AGG	+	chr8.1:15284160-15284179	MS.gene68979:intron	25.0%
!!!	CTTCAAAAATGAACTTGTTA+TGG	+	chr8.1:15284152-15284171	MS.gene68979:intron	25.0%
!!!	TGAACTTGTTATGGAATTAA+GGG	+	chr8.1:15284161-15284180	MS.gene68979:intron	25.0%
!!!	TGCCGTTTTTTCTTTTTTTT+TGG	+	chr8.1:15284556-15284575	MS.gene68979:intron	25.0%
	AAATCTGCTATGCAATCATT+TGG	+	chr8.1:15285657-15285676	MS.gene68979:intron	30.0%
	AACATTAGATTGCTCACAAA+GGG	+	chr8.1:15284792-15284811	MS.gene68979:intron	30.0%
	ACAATTTGTGTTATGAATGC+CGG	-	chr8.1:15285310-15285329	None:intergenic	30.0%
	ATCACTAAAACACAACAAGT+TGG	-	chr8.1:15285794-15285813	None:intergenic	30.0%
	ATGGTAAAAAGACAGCAAAA+AGG	-	chr8.1:15284526-15284545	None:intergenic	30.0%
	TAACATTAGATTGCTCACAA+AGG	+	chr8.1:15284791-15284810	MS.gene68979:intron	30.0%
	TATGACATCAAATTAACCTC+AGG	-	chr8.1:15285211-15285230	None:intergenic	30.0%
	TCCTTATCCTCACATAAAAT+CGG	-	chr8.1:15285028-15285047	None:intergenic	30.0%
!	ATAACACAAATTGTGTTGAC+AGG	+	chr8.1:15285316-15285335	MS.gene68979:intron	30.0%
!	GAATGTATGCTTTTCTATAC+TGG	+	chr8.1:15285367-15285386	MS.gene68979:intron	30.0%
!	GCTTGAATGTTTTGTCAATT+TGG	+	chr8.1:15284630-15284649	MS.gene68979:intron	30.0%
	AAAACGGCAGCAAATTTGTA+TGG	-	chr8.1:15284545-15284564	None:intergenic	35.0%
	ACATGAGTGATGACATCAAT+AGG	-	chr8.1:15285004-15285023	None:intergenic	35.0%
	AGCACTCAAGTTACAAAACA+AGG	-	chr8.1:15285277-15285296	None:intergenic	35.0%
	CACAGTTTATCGAGAAAGAA+AGG	+	chr8.1:15285516-15285535	MS.gene68979:intron	35.0%
	CTTGACAAAATGGTTACTCA+AGG	+	chr8.1:15284864-15284883	MS.gene68979:intron	35.0%
	GAAAACAAGTGCATAAAGAG+AGG	+	chr8.1:15284713-15284732	MS.gene68979:CDS	35.0%
	GGAGAGTTCTTGAAAATAAG+TGG	+	chr8.1:15284341-15284360	MS.gene68979:intron	35.0%
	TAAAGAGAGATTAGGGAAAC+AGG	-	chr8.1:15285145-15285164	None:intergenic	35.0%
	TAATATACAGGTCTATGAGC+TGG	-	chr8.1:15285478-15285497	None:intergenic	35.0%
	TCTATGAGCTGGATTATAGA+TGG	-	chr8.1:15285467-15285486	None:intergenic	35.0%
	TGAAATAAGCCAATCCAAAC+TGG	+	chr8.1:15284446-15284465	MS.gene68979:intron	35.0%
	TTTCTTACACATATAGCCTG+AGG	+	chr8.1:15285192-15285211	MS.gene68979:intron	35.0%
!	AACAAGCTTGAGTGTTTTCT+TGG	-	chr8.1:15283942-15283961	None:intergenic	35.0%
!	AGGAGGTGGTTAAAAGTATA+AGG	+	chr8.1:15284741-15284760	MS.gene68979:CDS	35.0%
!	CTTGAGTAACCATTTTGTCA+AGG	-	chr8.1:15284866-15284885	None:intergenic	35.0%
!	TCATGTTCCGATTTTATGTG+AGG	+	chr8.1:15285018-15285037	MS.gene68979:CDS	35.0%
!	TCCGATTTTATGTGAGGATA+AGG	+	chr8.1:15285024-15285043	MS.gene68979:CDS	35.0%
!!	ACACTCAAGCTTGTTAAAAG+AGG	+	chr8.1:15283947-15283966	MS.gene68979:CDS	35.0%
	AAAGGGTGAACTATCTCAAG+AGG	+	chr8.1:15285826-15285845	MS.gene68979:CDS	40.0%
	AACTTTGCGCTGAATCTTGA+TGG	+	chr8.1:15285089-15285108	MS.gene68979:intron	40.0%
	AAGGTGCAACATCATCAATG+AGG	-	chr8.1:15285258-15285277	None:intergenic	40.0%
	AGTATAAGGCGAGGTCAAAA+AGG	+	chr8.1:15284755-15284774	MS.gene68979:CDS	40.0%
	ATCAAGATTCAGCGCAAAGT+TGG	-	chr8.1:15285090-15285109	None:intergenic	40.0%
	CATAAAGAGAGGAGTTAAGG+AGG	+	chr8.1:15284724-15284743	MS.gene68979:CDS	40.0%
	GCAGAGTGTGTATTATAGCT+GGG	+	chr8.1:15284969-15284988	MS.gene68979:intron	40.0%
	GCTTATTTCAGCTGATCTAC+TGG	-	chr8.1:15284436-15284455	None:intergenic	40.0%
	GTATAAGGCGAGGTCAAAAA+GGG	+	chr8.1:15284756-15284775	MS.gene68979:CDS	40.0%
	GTGCATAAAGAGAGGAGTTA+AGG	+	chr8.1:15284721-15284740	MS.gene68979:CDS	40.0%
	TATGGAATTAAGGGCCTGTT+TGG	+	chr8.1:15284170-15284189	MS.gene68979:intron	40.0%
	TGAGATAGTTCACCCTTTGA+AGG	-	chr8.1:15285824-15285843	None:intergenic	40.0%
!	CTAAGCATTGCAGTGTTTCT+GGG	+	chr8.1:15284033-15284052	MS.gene68979:intron	40.0%
!	GTGGTTAAAAGTATAAGGCG+AGG	+	chr8.1:15284746-15284765	MS.gene68979:CDS	40.0%
!	TCTAAGCATTGCAGTGTTTC+TGG	+	chr8.1:15284032-15284051	MS.gene68979:intron	40.0%
!	TTGAGTGCTTTTCCTTATGC+CGG	+	chr8.1:15285288-15285307	MS.gene68979:intron	40.0%
!!!	TTGCAGTGTTTCTGGGTTTT+TGG	+	chr8.1:15284040-15284059	MS.gene68979:intron	40.0%
	AAAGAGAGGAGTTAAGGAGG+TGG	+	chr8.1:15284727-15284746	MS.gene68979:CDS	45.0%
	AGAGAGATTAGGGAAACAGG+CGG	-	chr8.1:15285142-15285161	None:intergenic	45.0%
	AGTGATGACCAAGCCTTCAA+AGG	+	chr8.1:15285808-15285827	MS.gene68979:CDS	45.0%
	ATTTGTCCAGGACCTTGCAA+CGG	+	chr8.1:15285751-15285770	MS.gene68979:intron	45.0%
	CGACAGTGAAGGTGAGAAAT+CGG	+	chr8.1:15283841-15283860	MS.gene68979:CDS	45.0%
	CGCAGAGTGTGTATTATAGC+TGG	+	chr8.1:15284968-15284987	MS.gene68979:intron	45.0%
	GAAAGCTTCTTTCCAGCAAG+AGG	-	chr8.1:15283920-15283939	None:intergenic	45.0%
	GTGATGACCAAGCCTTCAAA+GGG	+	chr8.1:15285809-15285828	MS.gene68979:CDS	45.0%
	GTGTTATGAATGCCGGCATA+AGG	-	chr8.1:15285303-15285322	None:intergenic	45.0%
	TAACATTCTTGGGGCCAGTT+TGG	-	chr8.1:15284463-15284482	None:intergenic	45.0%
!	AGCAAGAGGTTTTGCAATGG+GGG	-	chr8.1:15283906-15283925	None:intergenic	45.0%
!	CAGCAAGAGGTTTTGCAATG+GGG	-	chr8.1:15283907-15283926	None:intergenic	45.0%
!	CCAGCAAGAGGTTTTGCAAT+GGG	-	chr8.1:15283908-15283927	None:intergenic	45.0%
!	TAGTTCACCCTTTGAAGGCT+TGG	-	chr8.1:15285819-15285838	None:intergenic	45.0%
!	TCCAGCAAGAGGTTTTGCAA+TGG	-	chr8.1:15283909-15283928	None:intergenic	45.0%
	AAGGTGAGAAATCGGTGCAG+AGG	+	chr8.1:15283849-15283868	MS.gene68979:CDS	50.0%
	AGGTGAGAAATCGGTGCAGA+GGG	+	chr8.1:15283850-15283869	MS.gene68979:CDS	50.0%
	CACACTCTGCGTTGAGAAGA+AGG	-	chr8.1:15284959-15284978	None:intergenic	50.0%
	CCCATTGCAAAACCTCTTGC+TGG	+	chr8.1:15283905-15283924	MS.gene68979:CDS	50.0%
	GAAGGAGAGGAAGAAGATGC+AGG	+	chr8.1:15283874-15283893	MS.gene68979:CDS	50.0%
	TTCTTGGGGCCAGTTTGGAT+TGG	-	chr8.1:15284458-15284477	None:intergenic	50.0%
	GAAATCGGTGCAGAGGGAGA+AGG	+	chr8.1:15283856-15283875	MS.gene68979:CDS	55.0%
	TCGTTGCTCCTGCCGTTGCA+AGG	-	chr8.1:15285766-15285785	None:intergenic	60.0%
	CGGTGCAGAGGGAGAAGGAG+AGG	+	chr8.1:15283861-15283880	MS.gene68979:CDS	65.0%
	CTCCTGCCGTTGCAAGGTCC+TGG	-	chr8.1:15285760-15285779	None:intergenic	65.0%
	GTCCAGGACCTTGCAACGGC+AGG	+	chr8.1:15285755-15285774	MS.gene68979:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	15283833	15285922	15283833	ID=MS.gene68979
chr8.1	mRNA	15283833	15285922	15283833	ID=MS.gene68979.t1;Parent=MS.gene68979
chr8.1	exon	15283833	15283968	15283833	ID=MS.gene68979.t1.exon1;Parent=MS.gene68979.t1
chr8.1	CDS	15283833	15283968	15283833	ID=cds.MS.gene68979.t1;Parent=MS.gene68979.t1
chr8.1	exon	15284708	15284777	15284708	ID=MS.gene68979.t1.exon2;Parent=MS.gene68979.t1
chr8.1	CDS	15284708	15284777	15284708	ID=cds.MS.gene68979.t1;Parent=MS.gene68979.t1
chr8.1	exon	15284973	15285078	15284973	ID=MS.gene68979.t1.exon3;Parent=MS.gene68979.t1
chr8.1	CDS	15284973	15285078	15284973	ID=cds.MS.gene68979.t1;Parent=MS.gene68979.t1
chr8.1	exon	15285761	15285922	15285761	ID=MS.gene68979.t1.exon4;Parent=MS.gene68979.t1
chr8.1	CDS	15285761	15285922	15285761	ID=cds.MS.gene68979.t1;Parent=MS.gene68979.t1

Gene Sequence

>MS.gene68979

ATGGGAAGCGACAGTGAAGGTGAGAAATCGGTGCAGAGGGAGAAGGAGAGGAAGAAGATGCAGGCTCTAGCCCCCATTGCAAAACCTCTTGCTGGAAAGAAGCTTTCCAAGAAAACACTCAAGCTTGTTAAAAGAGGTATTTTCGAAGCTTTTAAACACTAGAGCTTGTTGAATTAATGAAAATCGTTAATTTGTGGCTTCTAAGCATTGCAGTGTTTCTGGGTTTTTGGAGTTAGTAAGAAAAATCACAACTTCTCTTTAATTTCAAAATGTATAATGCATCGAGTTTCTTATGTATGCTATGTAATTAGAGTATAAACTTCAAAAATGAACTTGTTATGGAATTAAGGGCCTGTTTGGATAAACAACTTATTTACAGCTTATAGCTCAAGCGCTTATCACACTTATGTACAAGCTTGCATAAGCTATGTTTATAGCAAAAGATTAAATTAACGTTAATTTGTTTTTGTATATGCCTAAATTGTTTTTATAAGCTATAAACTATATTGGAGAGTTCTTGAAAATAAGTGGACAAAAGCTTATGAAAATTGTTATCAGCTGTTTTTACAAATTCTCCAAAACAGACTTACAAAATGTATGCCAGTAGATCAGCTGAAATAAGCCAATCCAAACTGGCCCCAAGAATGTTATGTTATGAATCTAAGTATTATATTTTGCTGTCTGCTGTTACCTTTTTGCTGTCTTTTTACCATACAAATTTGCTGCCGTTTTTTCTTTTTTTTTGGAATGGCTAATGTTAATTTGTTGATTCTGTAATTTAAAAAGGAAAAAAATTAGCTTGAATGTTTTGTCAATTTGGATTACATAAATCTTTGTCTTATGGGACTATACTAATCTATGTGTGTTCTTTTCAGCTGCTGAAAACAAGTGCATAAAGAGAGGAGTTAAGGAGGTGGTTAAAAGTATAAGGCGAGGTCAAAAAGGGTCAGTATTAAGCTAACATTAGATTGCTCACAAAGGGCGTTAGAAATAATTAATTAATTCAAACTATGTTACTATCATTTATCTTCCTTGACAAAATGGTTACTCAAGGTGTATGTGAAGTGAATTCCCATTTTTTATGTTTCAATTGTGGAAAATAAATGTGTACACTTATTTTTTGCCTTCTTCTCAACGCAGAGTGTGTATTATAGCTGGGAACATATCGCCTATTGATGTCATCACTCATGTTCCGATTTTATGTGAGGATAAGGACATTCCATATGTATATGTCTCATCTAAAGAAGTAAGTAACCAACTTTGCGCTGAATCTTGATGGTTTTTATCATTTAGTTAATACTATTGACCGCCTGTTTCCCTAATCTCTCTTTAGAATAAGAAAAATTTGTTGTCATATATTTTCTTACACATATAGCCTGAGGTTAATTTGATGTCATAAATAACTAAAAGTTGAGGCTTTTTCCTCATTGATGATGTTGCACCTTGTTTTGTAACTTGAGTGCTTTTCCTTATGCCGGCATTCATAACACAAATTGTGTTGACAGGAGTTGAGTCCATATAACATATTTGAATGGAATGTATGCTTTTCTATACTGGATTGAATCATTTAGAGTATATCATACTTCAAGAAACATCTTTCAGCTATTTTAATTTTTTTATAGACACATCTGCCATCTATAATCCAGCTCATAGACCTGTATATTATGAATACAATAGTCATTGCACAGTTTATCGAGAAAGAAAGGATAATTTTTTGCTTCTCTTACCTACATAATATATCAACAATTCAACATGTGATGTTTTCAGTTTCGTTTTAAATATGGTATTAAGAGAAACATGGTTGAAATTGCTATTTTTCAAAAAAAATCTGCTATGCAATCATTTGGTGTTCATATATATGTTAAGAAACTCCAATTACTCTAGTACTTTGAAAGTTCATATATTAAATTTTTGAGATATTTGTCCAGGACCTTGCAACGGCAGGAGCAACGAAGAGACCAACTTGTTGTGTTTTAGTGATGACCAAGCCTTCAAAGGGTGAACTATCTCAAGAGGTACAAGAGAAACTAAAGTCAGAGTATGATCAAGTTGCATCAGAGTGTAGAGAGCTTCAGTCTACACTTTTTTGA

Protein sequence

>MS.gene68979.t1

MGSDSEGEKSVQREKERKKMQALAPIAKPLAGKKLSKKTLKLVKRAAENKCIKRGVKEVVKSIRRGQKGVCIIAGNISPIDVITHVPILCEDKDIPYVYVSSKEDLATAGATKRPTCCVLVMTKPSKGELSQEVQEKLKSEYDQVASECRELQSTLF