AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene056362

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056362.t1 MTR_4g066640 94.760 458 24 0 1 458 1 458 0.0 902
MS.gene056362.t1 MTR_4g066640 93.830 389 24 0 1 389 1 389 0.0 764
MS.gene056362.t1 MTR_4g066580 68.764 461 140 2 1 458 1 460 0.0 677
MS.gene056362.t1 MTR_3g028720 68.456 447 137 2 15 458 14 459 0.0 661
MS.gene056362.t1 MTR_3g028720 68.456 447 137 2 15 458 14 459 0.0 661
MS.gene056362.t1 MTR_4g066630 67.421 442 138 3 21 457 19 459 0.0 644
MS.gene056362.t1 MTR_4g066630 67.421 442 138 3 21 457 19 459 0.0 643
MS.gene056362.t1 MTR_4g066590 66.370 449 144 4 15 458 8 454 0.0 640
MS.gene056362.t1 MTR_2g098540 67.556 450 137 5 14 458 7 452 0.0 639
MS.gene056362.t1 MTR_2g098520 68.287 432 133 2 30 458 25 455 0.0 636
MS.gene056362.t1 MTR_2g098790 64.192 458 157 4 7 458 3 459 0.0 627
MS.gene056362.t1 MTR_6g078450 64.192 458 153 5 8 458 4 457 0.0 619
MS.gene056362.t1 MTR_4g066580 68.065 429 133 2 1 426 1 428 0.0 619
MS.gene056362.t1 MTR_6g078450 64.192 458 153 5 8 458 4 457 0.0 618
MS.gene056362.t1 MTR_3g028720 68.765 413 125 2 15 424 14 425 0.0 608
MS.gene056362.t1 MTR_6g078330 62.500 464 159 5 4 458 1 458 0.0 602
MS.gene056362.t1 MTR_4g066240 60.440 455 176 2 7 458 4 457 0.0 599
MS.gene056362.t1 MTR_4g066240 60.573 454 175 2 7 457 4 456 0.0 598
MS.gene056362.t1 MTR_2g098540 69.059 404 121 2 58 458 6 408 0.0 597
MS.gene056362.t1 MTR_4g066630 67.322 407 127 3 21 422 19 424 0.0 591
MS.gene056362.t1 MTR_4g066210 62.187 439 159 3 26 458 27 464 0.0 589
MS.gene056362.t1 MTR_4g066330 62.664 458 142 4 3 458 8 438 0.0 588
MS.gene056362.t1 MTR_6g078380 61.926 457 168 4 7 458 3 458 0.0 582
MS.gene056362.t1 MTR_4g066280 60.899 445 148 3 16 458 18 438 0.0 574
MS.gene056362.t1 MTR_4g067040 66.751 394 127 2 20 410 15 407 0.0 566
MS.gene056362.t1 MTR_5g071520 57.962 471 183 5 1 458 1 469 0.0 552
MS.gene056362.t1 MTR_4g066240 60.143 419 163 2 7 422 4 421 0.0 547
MS.gene056362.t1 MTR_3g028720 67.105 380 121 2 15 391 14 392 0.0 546
MS.gene056362.t1 MTR_4g067040 67.480 369 116 2 20 385 15 382 0.0 536
MS.gene056362.t1 MTR_4g066340 64.211 380 132 2 82 458 6 384 0.0 522
MS.gene056362.t1 MTR_4g066630 66.758 364 115 3 21 379 19 381 0.0 520
MS.gene056362.t1 MTR_3g026280 56.840 424 174 4 38 458 21 438 2.82e-177 506
MS.gene056362.t1 MTR_6g078330 65.634 355 118 2 107 458 1 354 1.04e-175 499
MS.gene056362.t1 MTR_4g015420 55.830 446 159 8 25 458 51 470 1.84e-172 494
MS.gene056362.t1 MTR_4g023000 54.502 422 184 4 38 457 23 438 3.16e-172 493
MS.gene056362.t1 MTR_6g078330 62.042 382 130 5 4 376 1 376 6.32e-171 485
MS.gene056362.t1 MTR_3g026400 53.201 453 203 6 10 458 7 454 6.48e-166 477
MS.gene056362.t1 MTR_4g015460 54.525 453 170 8 16 458 19 445 1.11e-163 471
MS.gene056362.t1 MTR_6g078330 61.798 356 130 3 106 458 2 354 1.03e-162 466
MS.gene056362.t1 MTR_2g043200 55.344 421 156 7 44 458 70 464 2.56e-162 468
MS.gene056362.t1 MTR_3g026400 55.309 405 175 4 56 458 23 423 6.76e-157 453
MS.gene056362.t1 MTR_3g026620 51.304 460 217 5 1 458 1 455 9.12e-155 449
MS.gene056362.t1 MTR_4g083000 49.127 458 207 8 12 458 6 448 6.52e-154 446
MS.gene056362.t1 MTR_5g044000 47.146 473 208 8 17 458 5 466 1.92e-148 433
MS.gene056362.t1 MTR_0110s0040 48.009 452 223 7 10 457 14 457 8.74e-145 424
MS.gene056362.t1 MTR_0110s0030 46.444 450 233 5 10 457 14 457 8.02e-142 416
MS.gene056362.t1 MTR_4g081530 47.046 457 219 7 12 458 1 444 9.03e-142 416
MS.gene056362.t1 MTR_3g026400 56.065 371 154 6 10 376 7 372 1.65e-141 410
MS.gene056362.t1 MTR_3g033810 45.626 423 219 5 36 458 18 429 2.85e-131 388
MS.gene056362.t1 MTR_4g131810 44.091 440 228 5 25 458 24 451 9.41e-129 383
MS.gene056362.t1 MTR_3g033790 45.476 420 217 6 39 458 19 426 1.66e-128 381
MS.gene056362.t1 MTR_2g022760 45.368 421 224 4 42 458 39 457 5.81e-125 373
MS.gene056362.t1 MTR_0110s0040 50.137 365 172 6 10 370 14 372 2.05e-122 363
MS.gene056362.t1 MTR_2g022710 43.231 458 247 7 7 458 5 455 2.48e-122 365
MS.gene056362.t1 MTR_2g022710 43.231 458 247 7 7 458 5 455 3.98e-122 364
MS.gene056362.t1 MTR_2g022710 43.231 458 247 7 7 458 5 455 1.30e-121 365
MS.gene056362.t1 MTR_4g131800 46.062 419 219 5 44 458 521 936 8.57e-121 377
MS.gene056362.t1 MTR_2g079580 40.860 465 254 7 1 458 1 451 1.21e-120 362
MS.gene056362.t1 MTR_2g022710 45.261 422 218 7 7 422 5 419 6.05e-120 357
MS.gene056362.t1 MTR_7g033860 44.131 426 211 8 41 457 50 457 7.54e-119 357
MS.gene056362.t1 MTR_2g079550 41.087 460 250 7 6 458 4 449 1.01e-118 357
MS.gene056362.t1 MTR_2g079580 42.657 429 225 7 1 422 1 415 1.81e-118 353
MS.gene056362.t1 MTR_5g068740 44.548 431 213 9 13 436 6 417 9.26e-118 355
MS.gene056362.t1 MTR_1g088610 45.370 432 210 8 13 437 6 418 1.27e-116 355
MS.gene056362.t1 MTR_4g083000 48.485 363 167 5 107 458 1 354 2.14e-116 347
MS.gene056362.t1 MTR_7g068910 42.488 426 224 7 38 458 30 439 4.25e-116 350
MS.gene056362.t1 MTR_0108s0030 42.823 418 212 4 40 457 4 394 2.79e-115 346
MS.gene056362.t1 MTR_4g016920 46.482 398 198 7 39 431 27 414 3.13e-114 345
MS.gene056362.t1 MTR_2g022710 44.634 410 214 7 7 410 5 407 5.87e-114 341
MS.gene056362.t1 MTR_7g068910 41.514 436 224 8 38 458 30 449 7.04e-113 342
MS.gene056362.t1 MTR_7g051650 44.762 420 213 6 40 457 76 478 1.94e-107 329
MS.gene056362.t1 MTR_7g051650 44.286 420 211 6 40 457 76 474 4.72e-106 325
MS.gene056362.t1 MTR_2g022710 45.455 385 197 7 7 385 5 382 8.21e-106 321
MS.gene056362.t1 MTR_7g051510 43.571 420 217 7 40 457 76 477 4.52e-105 323
MS.gene056362.t1 MTR_1g088630 50.789 317 122 5 38 350 26 312 7.49e-105 316
MS.gene056362.t1 MTR_7g051610 43.675 419 218 5 40 457 76 477 4.42e-104 320
MS.gene056362.t1 MTR_2g022760 44.101 356 193 4 107 458 1 354 1.32e-96 297
MS.gene056362.t1 MTR_1g088630 44.386 383 170 8 58 434 14 359 2.48e-96 298
MS.gene056362.t1 MTR_1g088630 52.593 270 118 4 38 303 26 289 6.53e-94 286
MS.gene056362.t1 MTR_2g022710 42.179 358 197 5 107 458 1 354 5.11e-91 283
MS.gene056362.t1 MTR_7g068900 40.872 367 188 8 102 458 17 364 1.04e-88 279
MS.gene056362.t1 MTR_4g016920 44.253 348 174 7 107 449 1 333 2.07e-88 276
MS.gene056362.t1 MTR_0110s0020 47.955 269 135 3 10 276 14 279 1.08e-86 268
MS.gene056362.t1 MTR_4g016920 51.383 253 117 3 107 356 1 250 2.10e-86 267
MS.gene056362.t1 MTR_7g056747 43.017 358 180 6 101 457 9 343 8.92e-84 263
MS.gene056362.t1 MTR_8g038650 44.330 97 53 1 262 358 57 152 9.33e-20 86.3
MS.gene056362.t1 MTR_8g038650 50.000 54 26 1 48 101 7 59 2.11e-11 62.4
MS.gene056362.t1 MTR_4g122980 25.278 360 190 14 80 428 169 460 6.21e-16 80.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056362.t1 AT5G44640 52.412 456 200 7 6 457 5 447 5.18e-171 490
MS.gene056362.t1 AT5G42260 53.201 453 197 7 9 457 6 447 5.36e-171 490
MS.gene056362.t1 AT2G44480 55.213 422 186 2 38 457 34 454 8.16e-170 488
MS.gene056362.t1 AT2G44480 55.213 422 186 2 38 457 65 485 2.25e-169 488
MS.gene056362.t1 AT2G44450 53.721 430 186 5 31 457 27 446 5.05e-167 480
MS.gene056362.t1 AT3G60130 52.719 423 190 5 39 457 30 446 1.37e-158 459
MS.gene056362.t1 AT2G25630 50.000 456 193 8 6 457 5 429 1.03e-155 451
MS.gene056362.t1 AT1G26560 52.103 428 196 5 36 458 29 452 3.13e-153 445
MS.gene056362.t1 AT5G54570 49.420 431 200 5 38 458 29 451 5.74e-151 437
MS.gene056362.t1 AT5G24550 46.943 458 228 6 9 457 3 454 1.47e-150 439
MS.gene056362.t1 AT5G54570 49.420 431 200 5 38 458 29 451 1.17e-149 437
MS.gene056362.t1 AT1G51470 49.524 420 204 5 39 458 45 456 4.40e-149 434
MS.gene056362.t1 AT5G24540 47.619 462 216 6 9 457 6 454 1.72e-147 428
MS.gene056362.t1 AT1G47600 49.526 422 201 6 39 458 45 456 1.85e-147 430
MS.gene056362.t1 AT1G47600 49.289 422 201 6 39 458 45 455 5.48e-147 429
MS.gene056362.t1 AT3G60140 47.541 427 211 4 39 457 26 447 5.61e-147 431
MS.gene056362.t1 AT5G24540 47.619 462 216 6 9 457 6 454 5.10e-146 427
MS.gene056362.t1 AT3G60120 48.941 425 211 4 38 458 13 435 1.47e-144 424
MS.gene056362.t1 AT2G44490 49.173 423 208 4 41 457 16 437 2.23e-144 424
MS.gene056362.t1 AT3G18080 49.299 428 204 7 34 456 34 453 4.83e-144 422
MS.gene056362.t1 AT2G44460 46.916 454 226 6 12 457 3 449 4.33e-143 422
MS.gene056362.t1 AT5G25980 46.137 466 236 9 1 458 9 467 8.98e-143 417
MS.gene056362.t1 AT5G25980 46.137 466 236 9 1 458 9 467 8.98e-143 417
MS.gene056362.t1 AT2G44470 44.615 455 243 4 7 457 1 450 1.91e-142 416
MS.gene056362.t1 AT5G25980 46.137 466 236 9 1 458 9 467 1.18e-141 417
MS.gene056362.t1 AT2G44470 46.296 432 227 3 30 457 20 450 2.53e-140 415
MS.gene056362.t1 AT3G60140 47.859 397 194 4 38 426 25 416 1.15e-138 406
MS.gene056362.t1 AT3G09260 46.572 423 220 4 39 457 35 455 1.57e-137 405
MS.gene056362.t1 AT2G44480 53.541 353 161 2 107 457 1 352 4.67e-137 400
MS.gene056362.t1 AT2G32860 47.406 424 218 3 39 458 94 516 2.96e-136 405
MS.gene056362.t1 AT3G03640 44.737 456 241 6 9 457 6 457 1.28e-135 401
MS.gene056362.t1 AT2G32860 47.170 424 220 2 39 458 94 517 2.54e-135 403
MS.gene056362.t1 AT3G18070 46.296 432 211 8 31 457 22 437 1.26e-134 397
MS.gene056362.t1 AT1G75940 45.516 446 230 7 21 457 21 462 4.60e-134 397
MS.gene056362.t1 AT3G18070 46.528 432 216 8 31 457 22 443 1.15e-133 395
MS.gene056362.t1 AT5G26000 48.349 424 202 8 43 458 42 456 1.74e-132 390
MS.gene056362.t1 AT1G66280 44.494 445 236 6 20 457 15 455 8.30e-132 391
MS.gene056362.t1 AT5G26000 48.349 424 202 8 43 458 42 456 9.73e-132 391
MS.gene056362.t1 AT2G44480 58.974 312 124 3 38 347 65 374 1.42e-131 385
MS.gene056362.t1 AT3G21370 45.581 430 217 7 39 457 33 456 6.55e-131 389
MS.gene056362.t1 AT1G66270 44.444 441 230 6 28 457 19 455 1.27e-130 388
MS.gene056362.t1 AT3G60130 52.078 361 163 5 101 457 40 394 1.34e-129 383
MS.gene056362.t1 AT5G36890 45.952 420 214 6 41 458 18 426 2.01e-129 384
MS.gene056362.t1 AT5G36890 45.952 420 214 6 41 458 18 426 2.08e-129 384
MS.gene056362.t1 AT5G28510 42.609 460 251 6 7 457 9 464 2.39e-129 385
MS.gene056362.t1 AT1G52400 45.077 457 237 8 9 457 10 460 3.83e-128 379
MS.gene056362.t1 AT1G66270 43.991 441 230 7 28 457 19 453 2.95e-127 379
MS.gene056362.t1 AT1G52400 45.077 457 237 8 9 457 10 460 3.40e-127 379
MS.gene056362.t1 AT1G52400 45.077 457 237 8 9 457 10 460 3.40e-127 379
MS.gene056362.t1 AT1G02850 47.115 416 186 9 40 445 27 418 1.14e-122 367
MS.gene056362.t1 AT3G60130 50.693 361 157 6 101 457 40 383 1.82e-121 362
MS.gene056362.t1 AT2G44470 46.133 375 197 3 31 401 21 394 1.88e-121 360
MS.gene056362.t1 AT1G02850 44.875 439 185 10 40 445 27 441 2.53e-118 356
MS.gene056362.t1 AT1G02850 44.875 439 185 10 40 445 27 441 2.80e-118 356
MS.gene056362.t1 AT1G02850 46.154 416 173 9 40 422 27 424 3.68e-118 353
MS.gene056362.t1 AT1G60090 42.699 452 228 11 11 458 4 428 8.06e-118 354
MS.gene056362.t1 AT4G22100 43.365 422 218 7 41 458 24 428 2.50e-117 353
MS.gene056362.t1 AT4G27830 43.124 429 222 7 35 458 19 430 4.24e-117 353
MS.gene056362.t1 AT4G27820 45.070 426 208 8 39 458 23 428 3.69e-116 350
MS.gene056362.t1 AT5G48375 47.179 390 161 9 39 422 38 388 4.08e-116 348
MS.gene056362.t1 AT1G61820 43.128 422 233 6 42 458 33 452 9.76e-116 349
MS.gene056362.t1 AT1G60090 44.524 420 205 10 11 427 4 398 1.35e-115 349
MS.gene056362.t1 AT1G45191 43.943 421 213 7 40 458 30 429 1.49e-114 346
MS.gene056362.t1 AT5G54570 46.685 362 175 5 107 458 1 354 1.82e-113 341
MS.gene056362.t1 AT1G45191 43.026 423 220 7 40 458 30 435 6.16e-113 342
MS.gene056362.t1 AT3G18070 50.459 327 154 5 31 355 22 342 3.06e-112 336
MS.gene056362.t1 AT1G02850 45.192 416 167 9 40 445 27 391 6.59e-112 338
MS.gene056362.t1 AT1G45191 42.791 430 216 8 40 458 30 440 1.98e-111 338
MS.gene056362.t1 AT1G60270 45.722 374 187 7 11 380 1 362 5.98e-111 332
MS.gene056362.t1 AT4G21760 41.371 423 228 7 44 458 59 469 5.85e-110 335
MS.gene056362.t1 AT1G61810 42.588 425 237 6 39 458 33 455 1.42e-109 334
MS.gene056362.t1 AT1G61810 42.891 422 234 6 42 458 36 455 1.93e-109 334
MS.gene056362.t1 AT1G45191 42.105 437 221 9 40 458 30 452 5.21e-109 333
MS.gene056362.t1 AT1G51490 47.536 345 170 5 46 389 27 361 5.53e-108 326
MS.gene056362.t1 AT1G45191 47.761 335 163 5 40 370 30 356 6.31e-107 323
MS.gene056362.t1 AT1G45191 47.761 335 163 5 40 370 30 356 1.16e-106 323
MS.gene056362.t1 AT1G61810 44.473 389 209 6 39 422 33 419 3.40e-106 322
MS.gene056362.t1 AT3G62750 40.141 426 226 9 36 458 46 445 3.92e-106 323
MS.gene056362.t1 AT2G44450 51.163 301 138 4 160 457 1 295 6.10e-106 319
MS.gene056362.t1 AT3G62750 40.376 426 225 9 36 458 20 419 7.87e-106 323
MS.gene056362.t1 AT3G62750 40.141 426 226 9 36 458 46 445 2.00e-105 323
MS.gene056362.t1 AT4G21760 40.662 423 221 8 44 458 59 459 1.31e-104 322
MS.gene056362.t1 AT3G62740 39.815 432 238 8 28 457 12 423 1.41e-102 313
MS.gene056362.t1 AT3G62740 39.815 432 238 8 28 457 12 423 3.28e-101 311
MS.gene056362.t1 AT3G62750 43.275 342 174 6 36 377 20 341 6.46e-98 299
MS.gene056362.t1 AT3G62750 43.275 342 174 6 36 377 20 341 6.46e-98 299
MS.gene056362.t1 AT3G62750 43.275 342 174 6 36 377 46 367 4.23e-97 299
MS.gene056362.t1 AT1G61810 51.311 267 126 3 42 306 36 300 3.17e-89 274
MS.gene056362.t1 AT4G27830 41.737 357 188 6 107 458 1 342 7.54e-89 277
MS.gene056362.t1 AT4G27820 43.296 358 182 7 107 458 1 343 2.02e-87 273
MS.gene056362.t1 AT4G27820 43.296 358 182 7 107 458 1 343 2.02e-87 273
MS.gene056362.t1 AT2G44460 46.753 308 151 4 158 457 1 303 3.58e-87 273
MS.gene056362.t1 AT1G61810 41.761 352 198 6 112 458 6 355 9.24e-84 264
MS.gene056362.t1 AT1G60270 46.043 278 143 4 107 380 1 275 3.86e-81 253
MS.gene056362.t1 AT2G44480 48.996 249 124 2 211 457 1 248 2.81e-78 246
MS.gene056362.t1 AT3G62750 38.310 355 195 8 107 458 1 334 1.07e-77 248
MS.gene056362.t1 AT3G62750 38.310 355 195 8 107 458 1 334 1.07e-77 248
MS.gene056362.t1 AT3G18070 44.485 272 141 5 191 457 100 366 4.51e-73 236
MS.gene056362.t1 AT3G18070 54.930 71 31 1 31 101 22 91 6.14e-18 86.3
MS.gene056362.t1 AT1G61820 39.871 311 181 5 153 458 4 313 1.35e-70 228
MS.gene056362.t1 AT3G18070 46.444 239 120 4 191 424 100 335 4.75e-68 221
MS.gene056362.t1 AT3G18070 54.930 71 31 1 31 101 22 91 3.24e-18 86.3
MS.gene056362.t1 AT3G18070 43.629 259 136 5 204 457 1 254 1.86e-67 218
MS.gene056362.t1 AT3G18070 45.778 225 114 4 204 423 1 222 1.92e-62 202
MS.gene056362.t1 AT5G16580 38.406 276 155 4 185 458 27 289 1.57e-49 171
MS.gene056362.t1 AT3G06510 25.595 336 184 13 102 428 159 437 4.15e-18 87.4
MS.gene056362.t1 AT3G06510 24.786 351 202 13 102 428 159 471 2.61e-16 82.0

Find 101 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGGTTAATTTCAGGTTTA+TGG 0.066072 4.1:+34284522 MS.gene056362:intron
TTTCCACGTGGCTTCATCTT+TGG 0.179231 4.1:+34279260 MS.gene056362:CDS
AAAGAAATTTACCTGATATT+TGG 0.210685 4.1:-34283234 None:intergenic
TGATTATGTGTAACTATATA+AGG 0.212347 4.1:-34283173 None:intergenic
TTCCACGTGGCTTCATCTTT+GGG 0.217307 4.1:+34279261 MS.gene056362:CDS
ACATGTTTGGGTGGTAATTC+TGG 0.227903 4.1:+34283143 MS.gene056362:CDS
ACAATTGCAGTTGAACAAAA+TGG 0.236440 4.1:+34284860 MS.gene056362:intron
GACTTACTTGGGAGTATTCT+TGG 0.244929 4.1:-34282501 None:intergenic
AGATCACTTGACTTCCAATT+TGG 0.245781 4.1:+34283449 MS.gene056362:CDS
GTGGCAGAGGACCAAGTATC+TGG 0.264254 4.1:+34279882 MS.gene056362:CDS
TAATTAATTACCATCCAAAT+TGG 0.278065 4.1:-34283463 None:intergenic
CATTGCCTTGTGGAGGTAAA+TGG 0.282756 4.1:-34284690 None:intergenic
GCATAACATTGGTAACAAAT+TGG 0.283831 4.1:+34283378 MS.gene056362:CDS
TTCGGTAGAAGAAGCTCTTT+TGG 0.285741 4.1:+34285332 MS.gene056362:CDS
TTGTATAGGCTGCTTCAATT+TGG 0.290045 4.1:+34285062 MS.gene056362:intron
ATGTTCTAGCCCAACATGTT+TGG 0.329686 4.1:+34283130 MS.gene056362:CDS
GATTATGAAGGATCAGAATA+TGG 0.342816 4.1:+34282452 MS.gene056362:CDS
GTTGTCTACATTACTGAAAA+TGG 0.345716 4.1:+34285151 MS.gene056362:CDS
GATCTTTGCTTCAAGGAATT+CGG 0.349501 4.1:+34283020 MS.gene056362:CDS
CTATGCTGATCTTTGCTTCA+AGG 0.368377 4.1:+34283013 MS.gene056362:CDS
TGTTCTAGCCCAACATGTTT+GGG 0.369906 4.1:+34283131 MS.gene056362:CDS
ATTCAACGACGCAACACTTT+CGG 0.375523 4.1:+34285314 MS.gene056362:CDS
GGATAATCTCCGGTTGTTAG+AGG 0.377413 4.1:-34284547 None:intergenic
GCATATCAAAAGGGCAAGAT+AGG 0.386935 4.1:+34283356 MS.gene056362:CDS
TGACCAATACCATCGCTATA+AGG 0.400152 4.1:+34281264 MS.gene056362:CDS
CAATCTCATCAACGAATTGT+TGG 0.408725 4.1:+34282681 MS.gene056362:CDS
AAAAGATCTCGAAGTCCTCT+TGG 0.415218 4.1:-34285097 None:intergenic
CGTGGCTTCATCTTTGGGGC+GGG 0.423208 4.1:+34279266 MS.gene056362:CDS
TCGGAGATAGAGTGAAGTAC+TGG 0.425135 4.1:+34283039 MS.gene056362:CDS
CAATAACATACCCGATCAAA+AGG 0.436997 4.1:+34283418 MS.gene056362:CDS
AGGATTGTTGTATTTCTCCT+TGG 0.438975 4.1:-34285128 None:intergenic
AAGTGTGCAGGCATATCAAA+AGG 0.439406 4.1:+34283346 MS.gene056362:intron
ATCAACGAATTGTTGGCTAA+TGG 0.451216 4.1:+34282688 MS.gene056362:CDS
ATTTAGTGAACTTAGGCAAT+CGG 0.457331 4.1:-34284597 None:intergenic
CAAGTCTTACAAGACGAGTA+TGG 0.460895 4.1:+34282865 MS.gene056362:CDS
TTGGAAGTCAAGTGATCTCT+TGG 0.460981 4.1:-34283444 None:intergenic
TGTGTATAAGACCAAATATC+AGG 0.464035 4.1:+34283223 MS.gene056362:CDS
CAAACATGTATATAGTTTGA+AGG 0.469332 4.1:+34279845 MS.gene056362:intron
TATTACTACAGGAAGATGTT+GGG 0.470013 4.1:+34282430 MS.gene056362:intron
GTGGAAAACTGCTCCGACTC+AGG 0.472367 4.1:-34279244 None:intergenic
TTATTACTACAGGAAGATGT+TGG 0.473846 4.1:+34282429 MS.gene056362:intron
CCTATAGATTCTCAATCGCT+TGG 0.475831 4.1:+34282478 MS.gene056362:CDS
ATAGTTTGAAGGTGCAGTAA+AGG 0.476392 4.1:+34279856 MS.gene056362:intron
TTACATGAAGTGTTAGTCAT+AGG 0.477483 4.1:-34284736 None:intergenic
CCAAGCGATTGAGAATCTAT+AGG 0.495495 4.1:-34282478 None:intergenic
ATAGGATCTGTTAAGTAACT+TGG 0.496012 4.1:-34284718 None:intergenic
GCAGTAAAGGAAGGTGGCAG+AGG 0.499185 4.1:+34279869 MS.gene056362:CDS
GATTGCAATTTAGTGAACTT+AGG 0.503385 4.1:-34284604 None:intergenic
GTGAAGGTGTCCCAGATACT+TGG 0.503819 4.1:-34279893 None:intergenic
AGTAATGGTGGATATGCAAT+GGG 0.504655 4.1:+34283089 MS.gene056362:CDS
AATTACCACCCAAACATGTT+GGG 0.506442 4.1:-34283139 None:intergenic
GTACCTTATAGCGATGGTAT+TGG 0.507757 4.1:-34281267 None:intergenic
GTCACACTTACTTTCGCAAA+CGG 0.507884 4.1:+34279188 MS.gene056362:CDS
CACTTGACTTCCAATTTGGA+TGG 0.509427 4.1:+34283453 MS.gene056362:CDS
TCCACGTGGCTTCATCTTTG+GGG 0.509644 4.1:+34279262 MS.gene056362:CDS
ACAAATTGGTTCATACCACT+TGG 0.515567 4.1:+34283392 MS.gene056362:CDS
TTTATGGAACCTCTAACAAC+CGG 0.516409 4.1:+34284538 MS.gene056362:CDS
TTGCAATCAAAGCTAGTGAA+TGG 0.522902 4.1:+34284619 MS.gene056362:CDS
GAATTACCACCCAAACATGT+TGG 0.526460 4.1:-34283140 None:intergenic
GAGCCATGGTTGTTTAGTAA+TGG 0.533702 4.1:+34283074 MS.gene056362:CDS
CCATGGTTGTTTAGTAATGG+TGG 0.540507 4.1:+34283077 MS.gene056362:CDS
GGATCTGTTAAGTAACTTGG+AGG 0.542167 4.1:-34284715 None:intergenic
ACCTTCACCCATCAACATCC+AGG 0.542518 4.1:+34279908 MS.gene056362:CDS
ATGGAAAACCTCTAGGTCCA+AGG 0.542893 4.1:+34284879 MS.gene056362:CDS
AACAACAAAGAGAGCAAGCA+TGG 0.551044 4.1:-34279159 None:intergenic
GGGTTACATTTAACGAGCCA+TGG 0.553181 4.1:+34283060 MS.gene056362:CDS
GAACAAAATGGAAAACCTCT+AGG 0.554211 4.1:+34284872 MS.gene056362:CDS
AAAAGATTATTACTTGATTG+CGG 0.557783 4.1:-34285403 None:intergenic
TTTGAAGGTGCAGTAAAGGA+AGG 0.559649 4.1:+34279860 MS.gene056362:CDS
ACGTGGCTTCATCTTTGGGG+CGG 0.566913 4.1:+34279265 MS.gene056362:CDS
TGGCAGAGGACCAAGTATCT+GGG 0.567259 4.1:+34279883 MS.gene056362:CDS
TTGACATCGGCAACCTGAGT+CGG 0.575732 4.1:+34279231 MS.gene056362:CDS
AAAATAGAGGGAAAGTTGAG+TGG 0.580934 4.1:+34282625 MS.gene056362:intron
CTCAGGTTGCCGATGTCAAG+AGG 0.581408 4.1:-34279227 None:intergenic
TGGAAAACCTCTAGGTCCAA+GGG 0.581920 4.1:+34284880 MS.gene056362:CDS
GGAAGATGTTGGGATTATGA+AGG 0.590173 4.1:+34282440 MS.gene056362:intron
ATAGAGGGAAAGTTGAGTGG+AGG 0.599311 4.1:+34282628 MS.gene056362:intron
CGGAGATAGAGTGAAGTACT+GGG 0.599926 4.1:+34283040 MS.gene056362:CDS
TACTCGTCTTGTAAGACTTG+AGG 0.605422 4.1:-34282862 None:intergenic
AGTGTGCAGGCATATCAAAA+GGG 0.608518 4.1:+34283347 MS.gene056362:intron
AACGAATATAGAAGAAATGA+CGG 0.610437 4.1:-34285380 None:intergenic
CTTGGAGGAGCATTGCCTTG+TGG 0.612202 4.1:-34284700 None:intergenic
GCAATGGGAACAACAGCACC+AGG 0.613253 4.1:+34283104 MS.gene056362:CDS
TGGATATACGTTTATCCAAG+AGG 0.618701 4.1:+34285082 MS.gene056362:CDS
AGTGGAGGCATAAATCATGA+AGG 0.618703 4.1:+34282643 MS.gene056362:CDS
GGAGGAGCATTGCCTTGTGG+AGG 0.623056 4.1:-34284697 None:intergenic
GGGCAAGATAGGCATAACAT+TGG 0.623136 4.1:+34283367 MS.gene056362:CDS
ACCTGGATGTTGATGGGTGA+AGG 0.626176 4.1:-34279909 None:intergenic
AGACTTACCCTTGGACCTAG+AGG 0.628477 4.1:-34284887 None:intergenic
GTTTCAACTCCTCTTGACAT+CGG 0.629562 4.1:+34279218 MS.gene056362:CDS
TAGTAATGGTGGATATGCAA+TGG 0.631646 4.1:+34283088 MS.gene056362:CDS
GAGCTAGTACCTTATAGCGA+TGG 0.633224 4.1:-34281273 None:intergenic
TCTAGCCCAACATGTTTGGG+TGG 0.652575 4.1:+34283134 MS.gene056362:CDS
ATTCATTAGCTATTTCAATG+TGG 0.653568 4.1:+34279136 MS.gene056362:CDS
GGTATGTTATTGTTTCCAAG+TGG 0.655699 4.1:-34283407 None:intergenic
GTCTTACAAGACGAGTATGG+TGG 0.656604 4.1:+34282868 MS.gene056362:CDS
GAAGGTGCAGTAAAGGAAGG+TGG 0.662646 4.1:+34279863 MS.gene056362:CDS
GCCCCAAAGATGAAGCCACG+TGG 0.674470 4.1:-34279263 None:intergenic
ATTAACCATTTACCTCCACA+AGG 0.685327 4.1:+34284685 MS.gene056362:CDS
CCACCATTACTAAACAACCA+TGG 0.686919 4.1:-34283077 None:intergenic
GTTGGGCTAGAACATCGACC+TGG 0.733866 4.1:-34283122 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTCCTATTTATTATTAT+AGG - chr4.1:34281382-34281401 None:intergenic 10.0%
!! AAGAATTAAAAAAGAATTAA+TGG + chr4.1:34282038-34282057 MS.gene056362:intron 10.0%
!! CTTTATTAAAAAGTTTAATT+TGG - chr4.1:34280712-34280731 None:intergenic 10.0%
!! TAATAATTCCTATTTAATAT+AGG - chr4.1:34281302-34281321 None:intergenic 10.0%
!! TAATATATGAAAATTATACA+TGG - chr4.1:34282159-34282178 None:intergenic 10.0%
!! TATATTAAATTTATTACTAC+AGG + chr4.1:34282419-34282438 MS.gene056362:intron 10.0%
!! TATATTTAATGATAACTTAA+GGG + chr4.1:34281347-34281366 MS.gene056362:intron 10.0%
!! TTATATTATATATAATTTGG+AGG - chr4.1:34281847-34281866 None:intergenic 10.0%
!! TTTAAATGTAGAAAAAATAA+GGG + chr4.1:34281216-34281235 MS.gene056362:intron 10.0%
!!! AAATAAAAATTTGTTGTTTT+CGG - chr4.1:34281409-34281428 None:intergenic 10.0%
!!! AATTAATTATTGATTTGTTT+TGG + chr4.1:34282312-34282331 MS.gene056362:intron 10.0%
!!! ATATCTTTTTTTTTTTTTTG+AGG - chr4.1:34280640-34280659 None:intergenic 10.0%
!!! TATCTTTTTTTTTTTTTTGA+GGG - chr4.1:34280639-34280658 None:intergenic 10.0%
!!! TTTATTTTAAATTGTTTGAT+TGG + chr4.1:34284504-34284523 MS.gene056362:intron 10.0%
!!! TTTTAAATGTAGAAAAAATA+AGG + chr4.1:34281215-34281234 MS.gene056362:intron 10.0%
!! AAAGAAAAAAAAAAAAAACC+TGG - chr4.1:34279929-34279948 None:intergenic 15.0%
!! AATCAAAACAACAATATTAT+AGG - chr4.1:34282085-34282104 None:intergenic 15.0%
!! CAAAAGATAATCTATTTAAA+TGG - chr4.1:34281001-34281020 None:intergenic 15.0%
!! CAAATGTATCAAAATATTAA+AGG + chr4.1:34284460-34284479 MS.gene056362:intron 15.0%
!! GTATATTTAATGATAACTTA+AGG + chr4.1:34281346-34281365 MS.gene056362:intron 15.0%
!! TAAATGTTTACATTCAAATA+TGG - chr4.1:34280092-34280111 None:intergenic 15.0%
!! TAGTTTCTCATATATTATAA+AGG - chr4.1:34279761-34279780 None:intergenic 15.0%
!! TCAAAATAATAAGATTGTAT+TGG + chr4.1:34282185-34282204 MS.gene056362:intron 15.0%
!! TTATATTGTAAAGTGATAAA+AGG - chr4.1:34281452-34281471 None:intergenic 15.0%
!!! AAAATATATTTTATTGCAAG+TGG - chr4.1:34280149-34280168 None:intergenic 15.0%
!!! AAAATCCTACAATTTATTTT+AGG - chr4.1:34281929-34281948 None:intergenic 15.0%
!!! AAATATATTTTATTGCAAGT+GGG - chr4.1:34280148-34280167 None:intergenic 15.0%
!!! AACTTTTTAATAAAGACAAA+AGG + chr4.1:34280717-34280736 MS.gene056362:intron 15.0%
!!! AATTTAAAATCAAACAATGA+AGG - chr4.1:34281151-34281170 None:intergenic 15.0%
!!! ATCATATTAATTTTCTTGAA+TGG + chr4.1:34285189-34285208 MS.gene056362:intron 15.0%
!!! ATTTAAAACTTGTTAATCAT+GGG + chr4.1:34280107-34280126 MS.gene056362:intron 15.0%
!!! GTTTTAAAAAAATCAAAAGA+GGG - chr4.1:34281524-34281543 None:intergenic 15.0%
!!! GTTTTTAACATAATATTTTC+TGG + chr4.1:34282542-34282561 MS.gene056362:intron 15.0%
!!! TGTTTGTTTTTTTTTTTTAC+CGG + chr4.1:34280377-34280396 MS.gene056362:intron 15.0%
!!! TGTTTTAAAAAAATCAAAAG+AGG - chr4.1:34281525-34281544 None:intergenic 15.0%
!!! TTATATTAGTTTCTTTAACT+AGG + chr4.1:34281477-34281496 MS.gene056362:intron 15.0%
!!! TTTTACTTCATAAAAATAGA+GGG + chr4.1:34282613-34282632 MS.gene056362:intron 15.0%
!!! TTTTTACTTCATAAAAATAG+AGG + chr4.1:34282612-34282631 MS.gene056362:intron 15.0%
!! AAAAGTGATGATAAAATTGT+TGG - chr4.1:34282591-34282610 None:intergenic 20.0%
!! AAAGAAATTTACCTGATATT+TGG - chr4.1:34283237-34283256 None:intergenic 20.0%
!! AACAAATGACTAATCAAATT+TGG - chr4.1:34281884-34281903 None:intergenic 20.0%
!! AACTAGAAATTGAAATTAAC+TGG - chr4.1:34280019-34280038 None:intergenic 20.0%
!! AAGATAATCTATTTAAATGG+AGG - chr4.1:34280998-34281017 None:intergenic 20.0%
!! AATTCCTATTTAATATAGGA+CGG - chr4.1:34281298-34281317 None:intergenic 20.0%
!! ACAAAATCTAACAAATAGTT+TGG - chr4.1:34282734-34282753 None:intergenic 20.0%
!! AGATAATCTATTTAAATGGA+GGG - chr4.1:34280997-34281016 None:intergenic 20.0%
!! ATGGTAACATTCAAAATTTA+CGG + chr4.1:34282707-34282726 MS.gene056362:intron 20.0%
!! CAAAATTGGTTAACATTATT+TGG - chr4.1:34279604-34279623 None:intergenic 20.0%
!! GCATAATATCTTAATCTTAA+AGG - chr4.1:34280229-34280248 None:intergenic 20.0%
!! TAATTAATTACCATCCAAAT+TGG - chr4.1:34283466-34283485 None:intergenic 20.0%
!! TATCATTAATCAATTTGAAG+TGG - chr4.1:34281660-34281679 None:intergenic 20.0%
!! TGATTATGTGTAACTATATA+AGG - chr4.1:34283176-34283195 None:intergenic 20.0%
!! TGATTTATGTATATCAAACT+TGG - chr4.1:34280782-34280801 None:intergenic 20.0%
!! TTAACACATGTAATATGAAT+TGG + chr4.1:34282289-34282308 MS.gene056362:intron 20.0%
!!! AATAATGTTAACCAATTTTG+AGG + chr4.1:34279604-34279623 MS.gene056362:intron 20.0%
!!! AATGGTTCATTTGATTTTAT+TGG + chr4.1:34284637-34284656 MS.gene056362:CDS 20.0%
!!! ATCATTAATCAATTTGAAGT+GGG - chr4.1:34281659-34281678 None:intergenic 20.0%
!!! ATCATTTGATTTGATTGTTT+TGG - chr4.1:34283826-34283845 None:intergenic 20.0%
!!! CATTTAAAACTTGTTAATCA+TGG + chr4.1:34280106-34280125 MS.gene056362:intron 20.0%
!!! CCAAATTTGTTTAAAAACAA+GGG - chr4.1:34283285-34283304 None:intergenic 20.0%
!!! TAAAGTCACTTTTTTTTTTG+TGG + chr4.1:34283726-34283745 MS.gene056362:intron 20.0%
!!! TAATTTTAGTTCATCTTATC+AGG - chr4.1:34283946-34283965 None:intergenic 20.0%
!!! TATGCTTACATTTTTTTTGA+AGG - chr4.1:34281978-34281997 None:intergenic 20.0%
!!! TCCAAATTTGTTTAAAAACA+AGG - chr4.1:34283286-34283305 None:intergenic 20.0%
!!! TGATTTAGAAAAGCTTTTAT+TGG + chr4.1:34279637-34279656 MS.gene056362:intron 20.0%
!!! TTAACATAATATTTTCTGGT+TGG + chr4.1:34282546-34282565 MS.gene056362:intron 20.0%
!!! TTGTTGGTAATAAAAAACAA+TGG + chr4.1:34281733-34281752 MS.gene056362:intron 20.0%
!!! TTTGATTAGTCATTTGTTAT+CGG + chr4.1:34281886-34281905 MS.gene056362:intron 20.0%
! AACGAATATAGAAGAAATGA+CGG - chr4.1:34285383-34285402 None:intergenic 25.0%
! AATGTAGAAAAAATAAGGGA+TGG + chr4.1:34281220-34281239 MS.gene056362:intron 25.0%
! AATTCACGAGTTTAATTACA+AGG - chr4.1:34279702-34279721 None:intergenic 25.0%
! ACATACAAAATGTTAATGAG+AGG + chr4.1:34279722-34279741 MS.gene056362:intron 25.0%
! ACATGTTTAATCAAAACATC+TGG - chr4.1:34281071-34281090 None:intergenic 25.0%
! AGATATTGAAGAATACTACT+TGG - chr4.1:34284300-34284319 None:intergenic 25.0%
! ATATATGTCGATGAAATTGT+AGG + chr4.1:34282802-34282821 MS.gene056362:intron 25.0%
! ATATCTTAATCTTAAAGGAG+AGG - chr4.1:34280224-34280243 None:intergenic 25.0%
! ATGTAAGCATACACTATTAA+TGG + chr4.1:34281987-34282006 MS.gene056362:intron 25.0%
! ATGTGGAGATAACTATAATT+TGG + chr4.1:34282963-34282982 MS.gene056362:intron 25.0%
! CAAACATGTATATAGTTTGA+AGG + chr4.1:34279845-34279864 MS.gene056362:intron 25.0%
! CAACAAAATATGTACATACT+TGG - chr4.1:34279304-34279323 None:intergenic 25.0%
! CATACATTTAAACACTTCAT+AGG + chr4.1:34284421-34284440 MS.gene056362:intron 25.0%
! GAGTACCTAAAATAAATTGT+AGG + chr4.1:34281921-34281940 MS.gene056362:intron 25.0%
! TAGGCAAATGATATTTGAAA+TGG - chr4.1:34282923-34282942 None:intergenic 25.0%
! TATATCAAACTTGTATAGCA+TGG - chr4.1:34280685-34280704 None:intergenic 25.0%
! TATTGTAAAGTGATAAAAGG+TGG - chr4.1:34281449-34281468 None:intergenic 25.0%
! TGGTGCCTATAATAATAAAT+AGG + chr4.1:34281374-34281393 MS.gene056362:intron 25.0%
! TTTAAACACTTCATAGGTTA+AGG + chr4.1:34284427-34284446 MS.gene056362:intron 25.0%
!! AAAAATCGTGAAACGATTTT+AGG - chr4.1:34279484-34279503 None:intergenic 25.0%
!! AAAAGTTTTTGCCTCAAAAT+TGG - chr4.1:34279618-34279637 None:intergenic 25.0%
!! ATTCATTAGCTATTTCAATG+TGG + chr4.1:34279136-34279155 MS.gene056362:CDS 25.0%
!! GAAGTGTTTAAATGTATGTA+TGG - chr4.1:34284419-34284438 None:intergenic 25.0%
!! GACAAAAAACATGTTTTCTT+CGG - chr4.1:34283653-34283672 None:intergenic 25.0%
!! TCATTAATCAATTTGAAGTG+GGG - chr4.1:34281658-34281677 None:intergenic 25.0%
!! TTAGAAAAGCTTTTATTGGT+TGG + chr4.1:34279641-34279660 MS.gene056362:intron 25.0%
!! TTCAATGTTTCTCTTTTTGT+TGG + chr4.1:34281717-34281736 MS.gene056362:intron 25.0%
!! TTGTTTGATTGGTTAATTTC+AGG + chr4.1:34284515-34284534 MS.gene056362:intron 25.0%
!! TTTAAAGAATTTTGCTCTAC+CGG - chr4.1:34280584-34280603 None:intergenic 25.0%
!! TTTTAATAGCCATAGTATGT+AGG + chr4.1:34280352-34280371 MS.gene056362:intron 25.0%
!!! ACTTTTTTCTCAATGACAAA+AGG + chr4.1:34280809-34280828 MS.gene056362:intron 25.0%
!!! ATTCGTAACTCTTTTTCATT+GGG + chr4.1:34282834-34282853 MS.gene056362:CDS 25.0%
!!! ATTGGTTAATTTCAGGTTTA+TGG + chr4.1:34284522-34284541 MS.gene056362:intron 25.0%
!!! ATTTCATTCCATTTTTTCTG+AGG + chr4.1:34282339-34282358 MS.gene056362:intron 25.0%
!!! CCCTTGTTTTTAAACAAATT+TGG + chr4.1:34283282-34283301 MS.gene056362:intron 25.0%
!!! GATCAAATTTTGACTTACTT+GGG - chr4.1:34282515-34282534 None:intergenic 25.0%
!!! GTTACATGATTTTAGAATCA+TGG - chr4.1:34279573-34279592 None:intergenic 25.0%
!!! TCAATATCTCTAAAACACTT+TGG + chr4.1:34284311-34284330 MS.gene056362:intron 25.0%
!!! TCGTCTTTTAAGAAAATATC+CGG + chr4.1:34280562-34280581 MS.gene056362:intron 25.0%
!!! TGATCAAATTTTGACTTACT+TGG - chr4.1:34282516-34282535 None:intergenic 25.0%
!!! TTCGTAGTTTATTTTCACTT+GGG - chr4.1:34283770-34283789 None:intergenic 25.0%
!!! TTGTTTTTTGTTGAAGAATC+CGG + chr4.1:34280422-34280441 MS.gene056362:intron 25.0%
!!! TTTCATTCCATTTTTTCTGA+GGG + chr4.1:34282340-34282359 MS.gene056362:intron 25.0%
!!! TTTCGTAGTTTATTTTCACT+TGG - chr4.1:34283771-34283790 None:intergenic 25.0%
!!! TTTTTTGTGGTACAAAAAGA+GGG + chr4.1:34283739-34283758 MS.gene056362:intron 25.0%
!!! TTTTTTTGTGGTACAAAAAG+AGG + chr4.1:34283738-34283757 MS.gene056362:intron 25.0%
!!! TTTTTTTTTTTACCGGTAGT+AGG + chr4.1:34280384-34280403 MS.gene056362:intron 25.0%
AAAAAAAACCTGGATGTTGA+TGG - chr4.1:34279919-34279938 None:intergenic 30.0%
AAAAAAACCTGGATGTTGAT+GGG - chr4.1:34279918-34279937 None:intergenic 30.0%
AATGATAACTTAAGGGAAGT+TGG + chr4.1:34281354-34281373 MS.gene056362:intron 30.0%
ACAAACAAACCTACATACTA+TGG - chr4.1:34280364-34280383 None:intergenic 30.0%
ACAATTGCAGTTGAACAAAA+TGG + chr4.1:34284860-34284879 MS.gene056362:intron 30.0%
ATAGGATCTGTTAAGTAACT+TGG - chr4.1:34284721-34284740 None:intergenic 30.0%
ATTATCCATAGTCGTGAAAT+AGG + chr4.1:34281318-34281337 MS.gene056362:intron 30.0%
ATTTAGTGAACTTAGGCAAT+CGG - chr4.1:34284600-34284619 None:intergenic 30.0%
CAATGAAAAAGAGTTACGAA+TGG - chr4.1:34282835-34282854 None:intergenic 30.0%
CATAAAATATGCTAAGTGTG+AGG + chr4.1:34280868-34280887 MS.gene056362:intron 30.0%
CTAACATACAGAGAAAACAA+AGG + chr4.1:34279975-34279994 MS.gene056362:intron 30.0%
CTGTATAGAGTAATTCTTCT+TGG + chr4.1:34279353-34279372 MS.gene056362:intron 30.0%
GATTATGAAGGATCAGAATA+TGG + chr4.1:34282452-34282471 MS.gene056362:CDS 30.0%
GATTGCAATTTAGTGAACTT+AGG - chr4.1:34284607-34284626 None:intergenic 30.0%
GTTGTCTACATTACTGAAAA+TGG + chr4.1:34285151-34285170 MS.gene056362:CDS 30.0%
TATCAGGAAACTACTGAAAA+TGG - chr4.1:34283930-34283949 None:intergenic 30.0%
TATGACTAACACTTCATGTA+AGG + chr4.1:34284738-34284757 MS.gene056362:intron 30.0%
TATTAAAGTTAAGCACTCCA+CGG + chr4.1:34280745-34280764 MS.gene056362:intron 30.0%
TATTACTACAGGAAGATGTT+GGG + chr4.1:34282430-34282449 MS.gene056362:intron 30.0%
TGAAATTCCCTCAGAAAAAA+TGG - chr4.1:34282350-34282369 None:intergenic 30.0%
TGTGTATAAGACCAAATATC+AGG + chr4.1:34283223-34283242 MS.gene056362:CDS 30.0%
TTAAAGTTACATAAGTGTGC+AGG + chr4.1:34283334-34283353 MS.gene056362:intron 30.0%
TTAATCAAAACATCTGGCAT+AGG - chr4.1:34281065-34281084 None:intergenic 30.0%
TTATTACTACAGGAAGATGT+TGG + chr4.1:34282429-34282448 MS.gene056362:intron 30.0%
TTTCTTTAACTAGGTTTCCA+GGG + chr4.1:34281486-34281505 MS.gene056362:intron 30.0%
! ACTTAGCATATTTTATGCCA+TGG - chr4.1:34280865-34280884 None:intergenic 30.0%
! CACTAGTTTAAGCACTATTA+AGG - chr4.1:34279389-34279408 None:intergenic 30.0%
! CATTAATCAATTTGAAGTGG+GGG - chr4.1:34281657-34281676 None:intergenic 30.0%
! CTGACAAGTTCAAGTTTAAT+GGG - chr4.1:34283971-34283990 None:intergenic 30.0%
! GCATAACATTGGTAACAAAT+TGG + chr4.1:34283378-34283397 MS.gene056362:CDS 30.0%
! TCTGACAAGTTCAAGTTTAA+TGG - chr4.1:34283972-34283991 None:intergenic 30.0%
! TTACATGAAGTGTTAGTCAT+AGG - chr4.1:34284739-34284758 None:intergenic 30.0%
! TTTTCAGTAATGTAGACAAC+AGG - chr4.1:34285151-34285170 None:intergenic 30.0%
!! AGATCTTTTGTTATACACCA+AGG + chr4.1:34285111-34285130 MS.gene056362:CDS 30.0%
!! CATTCGTAACTCTTTTTCAT+TGG + chr4.1:34282833-34282852 MS.gene056362:CDS 30.0%
!! GCATTTTGATCATCTTATAG+TGG - chr4.1:34284027-34284046 None:intergenic 30.0%
!! GTCATTCAACTCTTTAAAGT+CGG - chr4.1:34281635-34281654 None:intergenic 30.0%
!! TATTTTATTGCAAGTGGGTT+AGG - chr4.1:34280143-34280162 None:intergenic 30.0%
!! TTTCTTCACCTTTGAAACAA+AGG + chr4.1:34283625-34283644 MS.gene056362:intron 30.0%
!!! ATAAACTTTTGAAGCTCAGA+GGG + chr4.1:34283792-34283811 MS.gene056362:intron 30.0%
!!! CATTTACGAACTTTTCAAGT+AGG - chr4.1:34280275-34280294 None:intergenic 30.0%
!!! GTGACATGATTTTAGAATCA+TGG - chr4.1:34279543-34279562 None:intergenic 30.0%
AAAAGAAACCTACCTACTAC+CGG - chr4.1:34280399-34280418 None:intergenic 35.0%
AAAATAGAGGGAAAGTTGAG+TGG + chr4.1:34282625-34282644 MS.gene056362:intron 35.0%
AAAGGCTACACTAAGAAGAT+TGG - chr4.1:34284116-34284135 None:intergenic 35.0%
AAAGTTAATAAGCACCACCA+TGG + chr4.1:34280845-34280864 MS.gene056362:intron 35.0%
AATCTTAAAGGAGAGGAGTT+AGG - chr4.1:34280217-34280236 None:intergenic 35.0%
AATTACCACCCAAACATGTT+GGG - chr4.1:34283142-34283161 None:intergenic 35.0%
ACAAAAAATACCACCACAAC+TGG + chr4.1:34284157-34284176 MS.gene056362:intron 35.0%
AGAGTGTATCCAAATGGAAT+CGG - chr4.1:34283582-34283601 None:intergenic 35.0%
AGATCACTTGACTTCCAATT+TGG + chr4.1:34283449-34283468 MS.gene056362:CDS 35.0%
AGCTCCGTCCTATATTAAAT+AGG + chr4.1:34281291-34281310 MS.gene056362:intron 35.0%
AGGATTGTTGTATTTCTCCT+TGG - chr4.1:34285131-34285150 None:intergenic 35.0%
ATGTGCTAATCAACCATACT+TGG - chr4.1:34283901-34283920 None:intergenic 35.0%
ATTAACCATTTACCTCCACA+AGG + chr4.1:34284685-34284704 MS.gene056362:CDS 35.0%
CAATCTCATCAACGAATTGT+TGG + chr4.1:34282681-34282700 MS.gene056362:CDS 35.0%
CTATTTAAATGGAGGGTCTA+TGG - chr4.1:34280990-34281009 None:intergenic 35.0%
GAACAAAATGGAAAACCTCT+AGG + chr4.1:34284872-34284891 MS.gene056362:CDS 35.0%
GATCTTTGCTTCAAGGAATT+CGG + chr4.1:34283020-34283039 MS.gene056362:CDS 35.0%
GCTAAAATTAGCAAGCCAAT+TGG + chr4.1:34283856-34283875 MS.gene056362:intron 35.0%
GGTATGTTATTGTTTCCAAG+TGG - chr4.1:34283410-34283429 None:intergenic 35.0%
GTGAAGGACACTATTTACAT+AGG - chr4.1:34284254-34284273 None:intergenic 35.0%
GTTGTATTTGGGTATAGAGA+TGG - chr4.1:34284060-34284079 None:intergenic 35.0%
GTTTCTTTAACTAGGTTTCC+AGG + chr4.1:34281485-34281504 MS.gene056362:intron 35.0%
TAAATAGTGTCCTTCACCTT+AGG + chr4.1:34284257-34284276 MS.gene056362:intron 35.0%
TAGCGAATAGTGATTCAATG+TGG + chr4.1:34282946-34282965 MS.gene056362:intron 35.0%
TAGGTTGTTCGTATGGAAAT+TGG - chr4.1:34281046-34281065 None:intergenic 35.0%
TCCATTCGAAATGATGCATT+GGG + chr4.1:34283671-34283690 MS.gene056362:intron 35.0%
TCCATTTGGATACACTCTTT+CGG + chr4.1:34283584-34283603 MS.gene056362:intron 35.0%
TGGATATACGTTTATCCAAG+AGG + chr4.1:34285082-34285101 MS.gene056362:CDS 35.0%
TTAAAAACAAGGGCTAGAGA+CGG - chr4.1:34283275-34283294 None:intergenic 35.0%
TTGCAATCAAAGCTAGTGAA+TGG + chr4.1:34284619-34284638 MS.gene056362:CDS 35.0%
TTGTATAGGCTGCTTCAATT+TGG + chr4.1:34285062-34285081 MS.gene056362:intron 35.0%
TTTATGGAACCTCTAACAAC+CGG + chr4.1:34284538-34284557 MS.gene056362:CDS 35.0%
TTTCTCCTATTTCACGACTA+TGG - chr4.1:34281326-34281345 None:intergenic 35.0%
TTTGTGATGCAGATGGTAAA+TGG - chr4.1:34284142-34284161 None:intergenic 35.0%
! ACAAATTGGTTCATACCACT+TGG + chr4.1:34283392-34283411 MS.gene056362:CDS 35.0%
! ATAGTTTGAAGGTGCAGTAA+AGG + chr4.1:34279856-34279875 MS.gene056362:intron 35.0%
! ATCAACGAATTGTTGGCTAA+TGG + chr4.1:34282688-34282707 MS.gene056362:CDS 35.0%
! TAGCATATTTTATGCCATGG+TGG - chr4.1:34280862-34280881 None:intergenic 35.0%
!! AAGGAAATAGAAGTGCCAAT+TGG - chr4.1:34283874-34283893 None:intergenic 35.0%
!! AGTAATGGTGGATATGCAAT+GGG + chr4.1:34283089-34283108 MS.gene056362:CDS 35.0%
!! GCAGATGGTAAATGGATTAA+AGG - chr4.1:34284134-34284153 None:intergenic 35.0%
!! TAGTAATGGTGGATATGCAA+TGG + chr4.1:34283088-34283107 MS.gene056362:CDS 35.0%
!! TCTAATACACCGATTCCATT+TGG + chr4.1:34283570-34283589 MS.gene056362:intron 35.0%
!!! ACGAGAGTTTTAGAAATTGC+TGG + chr4.1:34283699-34283718 MS.gene056362:intron 35.0%
!!! AGAGTTTTAGAAATTGCTGG+AGG + chr4.1:34283702-34283721 MS.gene056362:intron 35.0%
!!! CATAAACTTTTGAAGCTCAG+AGG + chr4.1:34283791-34283810 MS.gene056362:intron 35.0%
!!! CATGCTTTTAGGATAATCTC+CGG - chr4.1:34284560-34284579 None:intergenic 35.0%
!!! GGTATTTTTTGTGATGCAGA+TGG - chr4.1:34284149-34284168 None:intergenic 35.0%
!!! TTTTTTTACCGGTAGTAGGT+AGG + chr4.1:34280388-34280407 MS.gene056362:intron 35.0%
AAAAGATCTCGAAGTCCTCT+TGG - chr4.1:34285100-34285119 None:intergenic 40.0%
AACAACAAAGAGAGCAAGCA+TGG - chr4.1:34279162-34279181 None:intergenic 40.0%
AACTTCATCCTACCTTCTTG+AGG + chr4.1:34284218-34284237 MS.gene056362:intron 40.0%
AAGTGTGCAGGCATATCAAA+AGG + chr4.1:34283346-34283365 MS.gene056362:intron 40.0%
ACATGTTTGGGTGGTAATTC+TGG + chr4.1:34283143-34283162 MS.gene056362:CDS 40.0%
AGTGTGCAGGCATATCAAAA+GGG + chr4.1:34283347-34283366 MS.gene056362:intron 40.0%
AGTTACTAGAGACTTACCCT+TGG - chr4.1:34284899-34284918 None:intergenic 40.0%
ATGGCACGATGATAGAATGT+GGG - chr4.1:34279524-34279543 None:intergenic 40.0%
ATGTTCTAGCCCAACATGTT+TGG + chr4.1:34283130-34283149 MS.gene056362:CDS 40.0%
ATTCAACGACGCAACACTTT+CGG + chr4.1:34285314-34285333 MS.gene056362:CDS 40.0%
ATTTGGGTATAGAGATGGCT+TGG - chr4.1:34284055-34284074 None:intergenic 40.0%
CAAGTCTTACAAGACGAGTA+TGG + chr4.1:34282865-34282884 MS.gene056362:CDS 40.0%
CACTTGACTTCCAATTTGGA+TGG + chr4.1:34283453-34283472 MS.gene056362:CDS 40.0%
CATACCTATGCATGTAAGTC+AGG - chr4.1:34285289-34285308 None:intergenic 40.0%
CCAAGCGATTGAGAATCTAT+AGG - chr4.1:34282481-34282500 None:intergenic 40.0%
CCACCATTACTAAACAACCA+TGG - chr4.1:34283080-34283099 None:intergenic 40.0%
CCATGGTTGTTTAGTAATGG+TGG + chr4.1:34283077-34283096 MS.gene056362:CDS 40.0%
CCTATAGATTCTCAATCGCT+TGG + chr4.1:34282478-34282497 MS.gene056362:CDS 40.0%
CTATGCTGATCTTTGCTTCA+AGG + chr4.1:34283013-34283032 MS.gene056362:CDS 40.0%
CTCTATACAGTTGCGTGAAT+AGG - chr4.1:34279343-34279362 None:intergenic 40.0%
GAATCACTATTCGCTATGCT+AGG - chr4.1:34282942-34282961 None:intergenic 40.0%
GAATTACCACCCAAACATGT+TGG - chr4.1:34283143-34283162 None:intergenic 40.0%
GAGCCATGGTTGTTTAGTAA+TGG + chr4.1:34283074-34283093 MS.gene056362:CDS 40.0%
GCATATCAAAAGGGCAAGAT+AGG + chr4.1:34283356-34283375 MS.gene056362:CDS 40.0%
GGAAGATGTTGGGATTATGA+AGG + chr4.1:34282440-34282459 MS.gene056362:intron 40.0%
GGATCTGTTAAGTAACTTGG+AGG - chr4.1:34284718-34284737 None:intergenic 40.0%
GGTGTATTAGAGATGGTAGT+GGG - chr4.1:34283561-34283580 None:intergenic 40.0%
GTACCTTATAGCGATGGTAT+TGG - chr4.1:34281270-34281289 None:intergenic 40.0%
GTCACACTTACTTTCGCAAA+CGG + chr4.1:34279188-34279207 MS.gene056362:CDS 40.0%
GTCCATTCGAAATGATGCAT+TGG + chr4.1:34283670-34283689 MS.gene056362:intron 40.0%
GTTTCAACTCCTCTTGACAT+CGG + chr4.1:34279218-34279237 MS.gene056362:CDS 40.0%
TACTCGTCTTGTAAGACTTG+AGG - chr4.1:34282865-34282884 None:intergenic 40.0%
TATACCAACCTACCTACTAC+CGG - chr4.1:34280444-34280463 None:intergenic 40.0%
TATGCATGTAAGTCAGGACA+GGG - chr4.1:34285283-34285302 None:intergenic 40.0%
TCCCAATGCATCATTTCGAA+TGG - chr4.1:34283675-34283694 None:intergenic 40.0%
TGACCAATACCATCGCTATA+AGG + chr4.1:34281264-34281283 MS.gene056362:CDS 40.0%
TGGAATCGGTGTATTAGAGA+TGG - chr4.1:34283568-34283587 None:intergenic 40.0%
TGTTCTAGCCCAACATGTTT+GGG + chr4.1:34283131-34283150 MS.gene056362:CDS 40.0%
TTGGAAGTCAAGTGATCTCT+TGG - chr4.1:34283447-34283466 None:intergenic 40.0%
TTGTTATCGGATCACTCTCT+AGG + chr4.1:34281899-34281918 MS.gene056362:intron 40.0%
TTGTTGAAGAATCCGGTAGT+AGG + chr4.1:34280429-34280448 MS.gene056362:intron 40.0%
TTTGGATACACTCTTTCGGA+CGG + chr4.1:34283588-34283607 MS.gene056362:intron 40.0%
! ACTTGGCATATTTTATGCCG+TGG - chr4.1:34280765-34280784 None:intergenic 40.0%
! AGTGGAGGCATAAATCATGA+AGG + chr4.1:34282643-34282662 MS.gene056362:CDS 40.0%
! CTTCGGATCCTTTGTTTCAA+AGG - chr4.1:34283636-34283655 None:intergenic 40.0%
! GAGATGTGGGTGTTGTATTT+GGG - chr4.1:34284071-34284090 None:intergenic 40.0%
! GTGTATTAGAGATGGTAGTG+GGG - chr4.1:34283560-34283579 None:intergenic 40.0%
! TCCGAAAGAGTGTATCCAAA+TGG - chr4.1:34283588-34283607 None:intergenic 40.0%
! TGAGATGTGGGTGTTGTATT+TGG - chr4.1:34284072-34284091 None:intergenic 40.0%
! TTCGGTAGAAGAAGCTCTTT+TGG + chr4.1:34285332-34285351 MS.gene056362:CDS 40.0%
! TTTGAAGGTGCAGTAAAGGA+AGG + chr4.1:34279860-34279879 MS.gene056362:CDS 40.0%
!! ACTATGGCTTGCATGCTTTT+AGG - chr4.1:34284571-34284590 None:intergenic 40.0%
!! AGGCAATCGGTTTTTCACTA+TGG - chr4.1:34284587-34284606 None:intergenic 40.0%
!! GACTTACTTGGGAGTATTCT+TGG - chr4.1:34282504-34282523 None:intergenic 40.0%
AATACGACCCATATCCTTGC+AGG + chr4.1:34284181-34284200 MS.gene056362:intron 45.0%
AGAAACGACCTCAAGAAGGT+AGG - chr4.1:34284229-34284248 None:intergenic 45.0%
ATAGAGGGAAAGTTGAGTGG+AGG + chr4.1:34282628-34282647 MS.gene056362:intron 45.0%
ATGCCTTACATGCTGAGATG+TGG - chr4.1:34284085-34284104 None:intergenic 45.0%
ATGGAAAACCTCTAGGTCCA+AGG + chr4.1:34284879-34284898 MS.gene056362:CDS 45.0%
ATGGGTCGTATTTCCAGTTG+TGG - chr4.1:34284173-34284192 None:intergenic 45.0%
CATGGCACGATGATAGAATG+TGG - chr4.1:34279525-34279544 None:intergenic 45.0%
CATTGCCTTGTGGAGGTAAA+TGG - chr4.1:34284693-34284712 None:intergenic 45.0%
CGGTGTATTAGAGATGGTAG+TGG - chr4.1:34283562-34283581 None:intergenic 45.0%
CTATGCATGTAAGTCAGGAC+AGG - chr4.1:34285284-34285303 None:intergenic 45.0%
CTGTCCTGACTTACATGCAT+AGG + chr4.1:34285282-34285301 MS.gene056362:intron 45.0%
GAGAGGAGTTAGGTCTCAAA+AGG - chr4.1:34280207-34280226 None:intergenic 45.0%
GAGCTAGTACCTTATAGCGA+TGG - chr4.1:34281276-34281295 None:intergenic 45.0%
GGATAATCTCCGGTTGTTAG+AGG - chr4.1:34284550-34284569 None:intergenic 45.0%
GGATAGAAACGACCTCAAGA+AGG - chr4.1:34284233-34284252 None:intergenic 45.0%
GGGCAAGATAGGCATAACAT+TGG + chr4.1:34283367-34283386 MS.gene056362:CDS 45.0%
GGGTTACATTTAACGAGCCA+TGG + chr4.1:34283060-34283079 MS.gene056362:CDS 45.0%
GTCTTACAAGACGAGTATGG+TGG + chr4.1:34282868-34282887 MS.gene056362:CDS 45.0%
TATTTCCTTCGCGCCAAGTA+TGG + chr4.1:34283885-34283904 MS.gene056362:intron 45.0%
TCGGAGATAGAGTGAAGTAC+TGG + chr4.1:34283039-34283058 MS.gene056362:CDS 45.0%
TCTGGCATAGGTTGTTCGTA+TGG - chr4.1:34281053-34281072 None:intergenic 45.0%
TGAAGAATCCGGTAGTAGGT+AGG + chr4.1:34280433-34280452 MS.gene056362:intron 45.0%
TGCCTTACATGCTGAGATGT+GGG - chr4.1:34284084-34284103 None:intergenic 45.0%
TGGAAAACCTCTAGGTCCAA+GGG + chr4.1:34284880-34284899 MS.gene056362:CDS 45.0%
TTCATAGGTTAAGGTGCGCA+AGG + chr4.1:34284436-34284455 MS.gene056362:intron 45.0%
TTCCACGTGGCTTCATCTTT+GGG + chr4.1:34279261-34279280 MS.gene056362:CDS 45.0%
TTTCCACGTGGCTTCATCTT+TGG + chr4.1:34279260-34279279 MS.gene056362:CDS 45.0%
! ACTTGGAGCACCTTCATAGA+GGG - chr4.1:34284283-34284302 None:intergenic 45.0%
! CGGAGATAGAGTGAAGTACT+GGG + chr4.1:34283040-34283059 MS.gene056362:CDS 45.0%
! TACTTGGAGCACCTTCATAG+AGG - chr4.1:34284284-34284303 None:intergenic 45.0%
!!! AACTTTTGAAGCTCAGAGGG+TGG + chr4.1:34283795-34283814 MS.gene056362:intron 45.0%
!! ACTTTATATTATATATAATT+TGG - chr4.1:34281850-34281869 None:intergenic 5.0%
!! TATATTTATAATAATTGTAT+AGG + chr4.1:34285048-34285067 MS.gene056362:intron 5.0%
!! TTAATTTATCATAATATTAA+AGG - chr4.1:34284804-34284823 None:intergenic 5.0%
!!! AAAATTCTTTAAAAATAAAT+TGG + chr4.1:34280591-34280610 MS.gene056362:intron 5.0%
ACCTTCACCCATCAACATCC+AGG + chr4.1:34279908-34279927 MS.gene056362:CDS 50.0%
AGACTTACCCTTGGACCTAG+AGG - chr4.1:34284890-34284909 None:intergenic 50.0%
ATCAACCATACTTGGCGCGA+AGG - chr4.1:34283893-34283912 None:intergenic 50.0%
CACCCACATCTCAGCATGTA+AGG + chr4.1:34284079-34284098 MS.gene056362:intron 50.0%
GAATCCGGTAGTAGGTAGGT+TGG + chr4.1:34280437-34280456 MS.gene056362:intron 50.0%
GACAGTGCCTGCAAGGATAT+GGG - chr4.1:34284191-34284210 None:intergenic 50.0%
GGTCGTATTTCCAGTTGTGG+TGG - chr4.1:34284170-34284189 None:intergenic 50.0%
TCACCTTAGGCCCTCTATGA+AGG + chr4.1:34284270-34284289 MS.gene056362:intron 50.0%
TCATAGAGGGCCTAAGGTGA+AGG - chr4.1:34284270-34284289 None:intergenic 50.0%
TCCACGTGGCTTCATCTTTG+GGG + chr4.1:34279262-34279281 MS.gene056362:CDS 50.0%
TCTAGCCCAACATGTTTGGG+TGG + chr4.1:34283134-34283153 MS.gene056362:CDS 50.0%
TGGCAGAGGACCAAGTATCT+GGG + chr4.1:34279883-34279902 MS.gene056362:CDS 50.0%
TTGACATCGGCAACCTGAGT+CGG + chr4.1:34279231-34279250 MS.gene056362:CDS 50.0%
! ACCTGGATGTTGATGGGTGA+AGG - chr4.1:34279912-34279931 None:intergenic 50.0%
! GAAGGTGCAGTAAAGGAAGG+TGG + chr4.1:34279863-34279882 MS.gene056362:CDS 50.0%
! GGGTATAGAGATGGCTTGGA+GGG - chr4.1:34284051-34284070 None:intergenic 50.0%
! GTAGTGGGGTGTAGCTTTCA+TGG - chr4.1:34283546-34283565 None:intergenic 50.0%
! TGGGTATAGAGATGGCTTGG+AGG - chr4.1:34284052-34284071 None:intergenic 50.0%
!! GTGAAGGTGTCCCAGATACT+TGG - chr4.1:34279896-34279915 None:intergenic 50.0%
CAATAGCGACAGTGCCTGCA+AGG - chr4.1:34284198-34284217 None:intergenic 55.0%
CGACAGTGCCTGCAAGGATA+TGG - chr4.1:34284192-34284211 None:intergenic 55.0%
GCAATGGGAACAACAGCACC+AGG + chr4.1:34283104-34283123 MS.gene056362:CDS 55.0%
GCACCTTCATAGAGGGCCTA+AGG - chr4.1:34284276-34284295 None:intergenic 55.0%
GCAGTAAAGGAAGGTGGCAG+AGG + chr4.1:34279869-34279888 MS.gene056362:CDS 55.0%
GTGGAAAACTGCTCCGACTC+AGG - chr4.1:34279247-34279266 None:intergenic 55.0%
GTGGCAGAGGACCAAGTATC+TGG + chr4.1:34279882-34279901 MS.gene056362:CDS 55.0%
! ACGTGGCTTCATCTTTGGGG+CGG + chr4.1:34279265-34279284 MS.gene056362:CDS 55.0%
! AGTCGGAGCAGTTTTCCACG+TGG + chr4.1:34279248-34279267 MS.gene056362:CDS 55.0%
! CTCAGGTTGCCGATGTCAAG+AGG - chr4.1:34279230-34279249 None:intergenic 55.0%
! GTTGGGCTAGAACATCGACC+TGG - chr4.1:34283125-34283144 None:intergenic 55.0%
!! CTTGGAGGAGCATTGCCTTG+TGG - chr4.1:34284703-34284722 None:intergenic 55.0%
GCCCCAAAGATGAAGCCACG+TGG - chr4.1:34279266-34279285 None:intergenic 60.0%
!! CGTGGCTTCATCTTTGGGGC+GGG + chr4.1:34279266-34279285 MS.gene056362:CDS 60.0%
!! GAGGGTGCTAAAGAGTGCCC+TGG - chr4.1:34281506-34281525 None:intergenic 60.0%
!! GGAGGAGCATTGCCTTGTGG+AGG - chr4.1:34284700-34284719 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 34279131 34285416 34279131 ID=MS.gene056362
chr4.1 mRNA 34279131 34285416 34279131 ID=MS.gene056362.t1;Parent=MS.gene056362
chr4.1 exon 34279131 34279304 34279131 ID=MS.gene056362.t1.exon1;Parent=MS.gene056362.t1
chr4.1 CDS 34279131 34279304 34279131 ID=cds.MS.gene056362.t1;Parent=MS.gene056362.t1
chr4.1 exon 34279860 34279929 34279860 ID=MS.gene056362.t1.exon2;Parent=MS.gene056362.t1
chr4.1 CDS 34279860 34279929 34279860 ID=cds.MS.gene056362.t1;Parent=MS.gene056362.t1
chr4.1 exon 34281227 34281285 34281227 ID=MS.gene056362.t1.exon3;Parent=MS.gene056362.t1
chr4.1 CDS 34281227 34281285 34281227 ID=cds.MS.gene056362.t1;Parent=MS.gene056362.t1
chr4.1 exon 34282441 34282516 34282441 ID=MS.gene056362.t1.exon4;Parent=MS.gene056362.t1
chr4.1 CDS 34282441 34282516 34282441 ID=cds.MS.gene056362.t1;Parent=MS.gene056362.t1
chr4.1 exon 34282632 34282709 34282632 ID=MS.gene056362.t1.exon5;Parent=MS.gene056362.t1
chr4.1 CDS 34282632 34282709 34282632 ID=cds.MS.gene056362.t1;Parent=MS.gene056362.t1
chr4.1 exon 34282824 34282911 34282824 ID=MS.gene056362.t1.exon6;Parent=MS.gene056362.t1
chr4.1 CDS 34282824 34282911 34282824 ID=cds.MS.gene056362.t1;Parent=MS.gene056362.t1
chr4.1 exon 34282998 34283244 34282998 ID=MS.gene056362.t1.exon7;Parent=MS.gene056362.t1
chr4.1 CDS 34282998 34283244 34282998 ID=cds.MS.gene056362.t1;Parent=MS.gene056362.t1
chr4.1 exon 34283356 34283474 34283356 ID=MS.gene056362.t1.exon8;Parent=MS.gene056362.t1
chr4.1 CDS 34283356 34283474 34283356 ID=cds.MS.gene056362.t1;Parent=MS.gene056362.t1
chr4.1 exon 34284537 34284754 34284537 ID=MS.gene056362.t1.exon9;Parent=MS.gene056362.t1
chr4.1 CDS 34284537 34284754 34284537 ID=cds.MS.gene056362.t1;Parent=MS.gene056362.t1
chr4.1 exon 34284870 34284901 34284870 ID=MS.gene056362.t1.exon10;Parent=MS.gene056362.t1
chr4.1 CDS 34284870 34284901 34284870 ID=cds.MS.gene056362.t1;Parent=MS.gene056362.t1
chr4.1 exon 34285070 34285172 34285070 ID=MS.gene056362.t1.exon11;Parent=MS.gene056362.t1
chr4.1 CDS 34285070 34285172 34285070 ID=cds.MS.gene056362.t1;Parent=MS.gene056362.t1
chr4.1 exon 34285304 34285416 34285304 ID=MS.gene056362.t1.exon12;Parent=MS.gene056362.t1
chr4.1 CDS 34285304 34285416 34285304 ID=cds.MS.gene056362.t1;Parent=MS.gene056362.t1
Gene Sequence

>MS.gene056362

ATGGTATTCATTAGCTATTTCAATGTGGCCATGCTTGCTCTCTTTGTTGTTAGCTCAGTCACACTTACTTTCGCAAACGGAGTTGAAGTTTCAACTCCTCTTGACATCGGCAACCTGAGTCGGAGCAGTTTTCCACGTGGCTTCATCTTTGGGGCGGGATCGTCATCTTACCAAGTATGTACATATTTTGTTGATGTAAATTAAGATATCCTATTCACGCAACTGTATAGAGTAATTCTTCTTGGAACAATGAAGCCTTAATAGTGCTTAAACTAGTGCAAAATTGTGTCATGATTTTTCGAAATCGTGCTATGTTGAAGTTATTACACAATAAATAACTACATCTTTATCCTAAAATCGTTTCACGATTTTTTTTCTTTTAGTAGTTAACCCACATTCTATCATCGTGCCATGATTCTAAAATCATGTCACAATCGTGCCATGATTCTAAAATCATGTAACGATTGTCGCCAAATAATGTTAACCAATTTTGAGGCAAAAACTTTTGATTTAGAAAAGCTTTTATTGGTTGGAATAAGTGTATGTTTTTACTTGTAATTAAGAAAATCCTTGTAATTAAACTCGTGAATTACATACAAAATGTTAATGAGAGGAGTTCATACAAAACCTTTATAATATATGAGAAACTATATTTAAAAGAATTAAATGTTTACTTGACTTGATCTTCTTAATTAATTTTTTGTTTGTGAAATGCAAACATGTATATAGTTTGAAGGTGCAGTAAAGGAAGGTGGCAGAGGACCAAGTATCTGGGACACCTTCACCCATCAACATCCAGGTTTTTTTTTTTTTTCTTTCTTTCTTTCTATCTCAGTTTAACACTCTAACATACAGAGAAAACAAAGGAAAGAAGATATTGCTTTGCCAGTTAATTTCAATTTCTAGTTTAATGAATACATTTTAAATCAATTTATCACTTTTAGAATTTGTATCTTATCCATATTTGAATGTAAACATTTAAAACTTGTTAATCATGGGAAGATACATGCCTAACCCACTTGCAATAAAATATATTTTAATTTGCAAAGAAATAAAATAAAATGTACTTTTAACCTTTTGAGACCTAACTCCTCTCCTTTAAGATTAAGATATTATGCAAATTGTGATTTTCAATTACAAGCCTACTTGAAAAGTTCGTAAATGAAAAAGAACACAACTTTTGTAAATTTATAATATGATCTAATTATTAGTATGTAGTTTTTTTAATAGCCATAGTATGTAGGTTTGTTTGTTTTTTTTTTTTACCGGTAGTAGGTAGGTTTCTTTTTTTTTGTTTTTTGTTGAAGAATCCGGTAGTAGGTAGGTTGGTATATATATCTTTTACATTGTCAATTAATTATAAATTAGTTGAAAATTTTAAATAATATTTTAAATAATCGATAATTGATTAACATTGTAAAAACTTTATGATCGTCTTTTAAGAAAATATCCGGTAGAGCAAAATTCTTTAAAAATAAATTGGCTAAACATGATATCAATATGTGCCCTCAAAAAAAAAAAAAAGATATCAATATGTGATTATGATGACGTCCATGCTATACAAGTTTGATATAAAATCCAAATTAAACTTTTTAATAAAGACAAAAGGTATAATATTAAAGTTAAGCACTCCACGGCATAAAATATGCCAAGTTTGATATACATAAATCAAAATTGAACTTTTTTCTCAATGACAAAAGGTATAATATAATTTAAAGTTAATAAGCACCACCATGGCATAAAATATGCTAAGTGTGAGGATTGAGAAGTTTAAGTTATCATTACTCTTATTTAAAAAACAAATTACTCACTATTCATTCACGTAACAATCTACACAATATAATTGTCATTCTTAACCATAGACCCTCCATTTAAATAGATTATCTTTTGTTAGAATATGATTGATTTTAGACCAATTTCCATACGAACAACCTATGCCAGATGTTTTGATTAAACATGTAATGAAAATCTTCAGTTAGATATTTGAAATTCAACAGAGCTTACAGTTATATTTTCTCCTTCATTGTTTGATTTTAAATTGTGTATATGCATAATTTACAATATTTATATGATGCATTATATGATTTTAAATGTAGAAAAAATAAGGGATGGAAGCAATGCAGACGTGACTGTTGACCAATACCATCGCTATAAGGTACTAGCTCCGTCCTATATTAAATAGGAATTATTATCCATAGTCGTGAAATAGGAGAAAGTATATTTAATGATAACTTAAGGGAAGTTGGTGCCTATAATAATAAATAGGAATTTTTCACCGAAAACAACAAATTTTTATTTACAAAAAGTTGAATATACCACCTTTTATCACTTTACAATATAATATTTTTATATTAGTTTCTTTAACTAGGTTTCCAGGGCACTCTTTAGCACCCTCTTTTGATTTTTTTAAAACAACTAAATTATTTATTAAGAGTCATATATTATATGAGATATAATCTAAAAACAAATTTTTATGTGCGAGACATCTTTCAATTTATAAGCCGACTTTAAAGAGTTGAATGACCCCCACTTCAAATTGATTAATGATATTCGTACAACTATTTTGCAACAATTTTTGAGATAAACTTCAATGTTTCTCTTTTTGTTGGTAATAAAAAACAATGGAGTGAGAAAAAAGAAGAGATGAAGTAAGAACATAATGTGAGTATAAAAGTGAAAGTTGTCACAAATTGATTGTACAAATATCATTTTTCCTCCAAATTATATATAATATAAAGTCAAAGTCTATTCCAAATTTGATTAGTCATTTGTTATCGGATCACTCTCTAGGAGTACCTAAAATAAATTGTAGGATTTTTCTCTAACATGTAAGCATACACTATTCCTTCAAAAAAAATGTAAGCATACACTATTAATGGAACATTTAATGCTTGAAAATAACTTAAAAAGAATTAAAAAAGAATTAATGGAACATTTAATGCTTGAAAATACCTATAATATTGTTGTTTTGATTCATAAAAAAGAATTAAAAAAAACTTAAAAAATTCAAAATAGTAAGTTTGTACCATGTATAATTTTCATATATTAAGAAGTTCAAAATAATAAGATTGTATTGGACTTTTACATTTTATATTAAATGTATAAATTTATAATAAATAATTGTTGTTTTCAATAAAAAGTTGTTACATACAGTTGCTTTAACACATGTAATATGAATTGGAATTAATTATTGATTTGTTTTGGCACTATTTCATTCCATTTTTTCTGAGGGAATTTCATTTCATTTCTATTAATTAATTTCATTTTGTGTGTGTACAATATAACAAATATATTAAATTTATTACTACAGGAAGATGTTGGGATTATGAAGGATCAGAATATGGATTCCTATAGATTCTCAATCGCTTGGCCAAGAATACTCCCAAGTAAGTCAAAATTTGATCATAGACAGTTTTTAACATAATATTTTCTGGTTGGATGCTATATATGTTTCACACCAACAATTTTATCATCACTTTTTTTTTTACTTCATAAAAATAGAGGGAAAGTTGAGTGGAGGCATAAATCATGAAGGAATCAAATATTACAACAATCTCATCAACGAATTGTTGGCTAATGGTAACATTCAAAATTTACGGTCCAAACTATTTGTTAGATTTTGTATTTTCATAATAAAGTAGTTGTTAGTAAAAAAAAATCAAATACTTACAATATATGTCGATGAAATTGTAGGCATACAACCATTCGTAACTCTTTTTCATTGGGATCTTCCTCAAGTCTTACAAGACGAGTATGGTGGTTTCTTAAGCTCTCTCATAATGTGAGTCTCCATTTCAAATATCATTTGCCTAGCATAGCGAATAGTGATTCAATGTGGAGATAACTATAATTTGGTTAATGTTTTAGAAATGATTTTCGAGACTATGCTGATCTTTGCTTCAAGGAATTCGGAGATAGAGTGAAGTACTGGGTTACATTTAACGAGCCATGGTTGTTTAGTAATGGTGGATATGCAATGGGAACAACAGCACCAGGTCGATGTTCTAGCCCAACATGTTTGGGTGGTAATTCTGGCACAGAACCTTATATAGTTACACATAATCAAATTCTTGCTCATGCAGAAGCTGTACATGTGTATAAGACCAAATATCAGGTAAATTTCTTTGTTCACAACTTAAAACCGTCTCTAGCCCTTGTTTTTAAACAAATTTGGATTATAGTTAAATTTTAAATAGTTCATATTTAAAGTTACATAAGTGTGCAGGCATATCAAAAGGGCAAGATAGGCATAACATTGGTAACAAATTGGTTCATACCACTTGGAAACAATAACATACCCGATCAAAAGGCTGCCAAGAGATCACTTGACTTCCAATTTGGATGGTAATTAATTAAGTGCTCATAAAAATTTCAAACACAAATCTAGTATGTAGTACAAGAAAGTCATATATCCATGAAAGCTACACCCCACTACCATCTCTAATACACCGATTCCATTTGGATACACTCTTTCGGACGGACTAAAATCATCATTTTCTTCACCTTTGAAACAAAGGATCCGAAGAAAACATGTTTTTTGTCCATTCGAAATGATGCATTGGGATTAAACGAGAGTTTTAGAAATTGCTGGAGGATAAAGTCACTTTTTTTTTTGTGGTACAAAAAGAGGGCAAAGCCCAAGTGAAAATAAACTACGAAACATAAACTTTTGAAGCTCAGAGGGTGGAGTCTCCAAAACAATCAAATCAAATGATTTACAGAAATGCTAAAATTAGCAAGCCAATTGGCACTTCTATTTCCTTCGCGCCAAGTATGGTTGATTAGCACATGCAAATCCATTTTCAGTAGTTTCCTGATAAGATGAACTAAAATTATTCCCATTAAACTTGAACTTGTCAGAAATCATGTCGATCAATATCTTCGAGTCACTTTCCACTATAAGATGATCAAAATGCTCCCTCCAAGCCATCTCTATACCCAAATACAACACCCACATCTCAGCATGTAAGGCATCACATGCTCCAATCTTCTTAGTGTAGCCTTTAATCCATTTACCATCTGCATCACAAAAAATACCACCACAACTGGAAATACGACCCATATCCTTGCAGGCACTGTCGCTATTGAACTTCATCCTACCTTCTTGAGGTCGTTTCTATCCTATGTAAATAGTGTCCTTCACCTTAGGCCCTCTATGAAGGTGCTCCAAGTAGTATTCTTCAATATCTCTAAAACACTTTGGTTTTATTATGACTAAATTAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCCATACATACATTTAAACACTTCATAGGTTAAGGTGCGCAAGGACAAATGTATCAAAATATTAAAGGTTAGTAGTATTTATTTATTTATTTATTTTAAATTGTTTGATTGGTTAATTTCAGGTTTATGGAACCTCTAACAACCGGAGATTATCCTAAAAGCATGCAAGCCATAGTGAAAAACCGATTGCCTAAGTTCACTAAATTGCAATCAAAGCTAGTGAATGGTTCATTTGATTTTATTGGTGTAAACTATTACTCTTCTAGCTATATTAACCATTTACCTCCACAAGGCAATGCTCCTCCAAGTTACTTAACAGATCCTATGACTAACACTTCATGTAAGGACACTTATCTATTCTACATTTCTACTTGTGTTAATTAGTTCCTTTAATATTATGATAAATTAAGTATGTTGATTTTGATGATTCTCTCTCTTTATTTTCACAATTGCAGTTGAACAAAATGGAAAACCTCTAGGTCCAAGGGTAAGTCTCTAGTAACTTAAAGTACTACTAAAAAAAATAAAATAAAAAAATAAATTACATCTCTAATTCTCTTATTAAATTTTGTGAGTGAAACATTTTCTTTGTCAAAGTTTAAATCAATTAATAAATAAAACAGTAATAATATATATATTTATAATAATTGTATAGGCTGCTTCAATTTGGATATACGTTTATCCAAGAGGACTTCGAGATCTTTTGTTATACACCAAGGAGAAATACAACAATCCTGTTGTCTACATTACTGAAAATGGTAAATACAAAAATAAATCATATTAATTTTCTTGAATGGATCATATAATTGAAGAATTTATATTGAACAATCTTATTATACAAATGTATGTATACATTTAATTTTGTCCCTGTCCTGACTTACATGCATAGGTATGAACGAATTCAACGACGCAACACTTTCGGTAGAAGAAGCTCTTTTGGATACTTACAGAATTGATTACTATTACCGTCATTTCTTCTATATTCGTTCCGCAATCAAGTAA
Protein sequence

>MS.gene056362.t1

MVFISYFNVAMLALFVVSSVTLTFANGVEVSTPLDIGNLSRSSFPRGFIFGAGSSSYQFEGAVKEGGRGPSIWDTFTHQHPEKIRDGSNADVTVDQYHRYKEDVGIMKDQNMDSYRFSIAWPRILPKGKLSGGINHEGIKYYNNLINELLANGIQPFVTLFHWDLPQVLQDEYGGFLSSLIINDFRDYADLCFKEFGDRVKYWVTFNEPWLFSNGGYAMGTTAPGRCSSPTCLGGNSGTEPYIVTHNQILAHAEAVHVYKTKYQAYQKGKIGITLVTNWFIPLGNNNIPDQKAAKRSLDFQFGWFMEPLTTGDYPKSMQAIVKNRLPKFTKLQSKLVNGSFDFIGVNYYSSSYINHLPPQGNAPPSYLTDPMTNTSFEQNGKPLGPRAASIWIYVYPRGLRDLLLYTKEKYNNPVVYITENGMNEFNDATLSVEEALLDTYRIDYYYRHFFYIRSAIK