AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene069482


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069482.t1 MTR_6g078380 92.776 263 19 0 13 275 76 338 0.0 523
MS.gene069482.t1 MTR_6g078450 87.452 263 33 0 13 275 76 338 1.36e-180 505
MS.gene069482.t1 MTR_6g078450 87.452 263 33 0 13 275 76 338 2.95e-179 504
MS.gene069482.t1 MTR_6g078330 76.426 263 62 0 13 275 77 339 1.24e-155 439
MS.gene069482.t1 MTR_6g078330 76.426 263 62 0 13 275 77 339 2.71e-153 438
MS.gene069482.t1 MTR_3g028720 73.077 260 70 0 16 275 81 340 7.94e-149 422
MS.gene069482.t1 MTR_3g028720 73.077 260 70 0 16 275 81 340 2.22e-148 422
MS.gene069482.t1 MTR_3g028720 73.077 260 70 0 16 275 81 340 3.30e-148 423
MS.gene069482.t1 MTR_4g066580 72.692 260 71 0 16 275 82 341 5.13e-147 419
MS.gene069482.t1 MTR_3g028720 73.077 260 70 0 16 275 81 340 9.52e-147 422
MS.gene069482.t1 MTR_4g067040 73.359 259 69 0 17 275 78 336 1.55e-145 414
MS.gene069482.t1 MTR_4g066580 72.692 260 71 0 16 275 82 341 1.82e-145 419
MS.gene069482.t1 MTR_4g067040 73.359 259 69 0 17 275 78 336 4.28e-145 413
MS.gene069482.t1 MTR_4g066630 71.429 259 74 0 17 275 83 341 5.77e-144 409
MS.gene069482.t1 MTR_4g066630 71.429 259 74 0 17 275 83 341 5.87e-143 409
MS.gene069482.t1 MTR_4g066590 72.973 259 70 0 17 275 77 335 6.60e-143 412
MS.gene069482.t1 MTR_2g098520 71.154 260 75 0 16 275 77 336 7.01e-143 411
MS.gene069482.t1 MTR_2g098540 70.189 265 79 0 16 280 74 338 9.75e-143 411
MS.gene069482.t1 MTR_2g098540 70.189 265 79 0 16 280 30 294 9.96e-143 409
MS.gene069482.t1 MTR_4g066630 71.429 259 74 0 17 275 83 341 1.06e-142 409
MS.gene069482.t1 MTR_4g066240 69.434 265 81 0 16 280 79 343 1.05e-141 405
MS.gene069482.t1 MTR_4g066630 70.881 261 76 0 17 277 83 343 1.73e-141 408
MS.gene069482.t1 MTR_4g066210 70.189 265 79 0 16 280 86 350 2.60e-141 408
MS.gene069482.t1 MTR_2g098790 70.189 265 79 0 16 280 81 345 7.33e-141 406
MS.gene069482.t1 MTR_4g066240 69.434 265 81 0 16 280 79 343 2.49e-140 405
MS.gene069482.t1 MTR_4g066240 69.434 265 81 0 16 280 79 343 3.30e-140 405
MS.gene069482.t1 MTR_4g066340 69.173 266 82 0 15 280 5 270 8.69e-139 398
MS.gene069482.t1 MTR_6g078330 77.021 235 54 0 41 275 1 235 1.26e-138 397
MS.gene069482.t1 MTR_4g066640 69.732 261 75 2 16 275 82 339 8.34e-138 394
MS.gene069482.t1 MTR_4g066640 69.732 261 75 2 16 275 82 339 1.18e-135 393
MS.gene069482.t1 MTR_5g071520 66.543 269 81 1 16 275 82 350 3.16e-126 369
MS.gene069482.t1 MTR_6g078330 73.543 223 57 1 53 275 15 235 9.22e-124 359
MS.gene069482.t1 MTR_3g026280 62.692 260 97 0 16 275 65 324 5.64e-122 357
MS.gene069482.t1 MTR_4g066330 64.615 260 66 2 16 275 84 317 4.27e-119 350
MS.gene069482.t1 MTR_3g026400 61.004 259 98 2 16 274 80 335 1.10e-117 342
MS.gene069482.t1 MTR_3g026400 61.004 259 98 2 16 274 49 304 2.79e-115 340
MS.gene069482.t1 MTR_3g026400 61.004 259 98 2 16 274 80 335 3.70e-115 341
MS.gene069482.t1 MTR_4g023000 59.316 263 106 1 13 275 64 325 5.04e-115 340
MS.gene069482.t1 MTR_4g066280 61.154 260 75 2 16 275 84 317 8.48e-114 337
MS.gene069482.t1 MTR_4g083000 57.854 261 108 1 17 277 71 329 9.18e-110 327
MS.gene069482.t1 MTR_3g026620 59.615 260 102 2 16 275 81 337 7.90e-107 320
MS.gene069482.t1 MTR_5g044000 57.471 261 109 1 17 277 89 347 7.86e-106 317
MS.gene069482.t1 MTR_0110s0040 54.615 260 115 2 18 277 87 343 8.70e-103 306
MS.gene069482.t1 MTR_0110s0040 54.615 260 115 2 18 277 87 343 3.72e-101 305
MS.gene069482.t1 MTR_0110s0030 53.462 260 118 2 18 277 87 343 6.89e-99 299
MS.gene069482.t1 MTR_4g081530 54.023 261 118 1 17 277 67 325 5.34e-97 294
MS.gene069482.t1 MTR_4g083000 57.806 237 98 1 41 277 1 235 8.13e-97 290
MS.gene069482.t1 MTR_4g015420 54.054 259 93 3 17 275 108 340 1.95e-96 293
MS.gene069482.t1 MTR_4g016920 51.538 260 124 1 21 280 74 331 7.51e-95 289
MS.gene069482.t1 MTR_2g043200 54.651 258 91 2 18 275 109 340 1.24e-93 286
MS.gene069482.t1 MTR_7g068910 51.923 260 123 1 21 280 78 335 2.79e-93 285
MS.gene069482.t1 MTR_4g131810 52.308 260 121 3 18 275 73 331 1.97e-92 283
MS.gene069482.t1 MTR_7g068910 50.000 270 123 2 21 280 78 345 4.93e-90 277
MS.gene069482.t1 MTR_4g015460 51.163 258 100 2 18 275 86 317 1.36e-89 275
MS.gene069482.t1 MTR_2g079580 48.462 260 132 2 18 277 76 333 3.58e-89 271
MS.gene069482.t1 MTR_5g068740 50.787 254 122 2 23 275 74 325 4.57e-89 274
MS.gene069482.t1 MTR_1g088610 51.575 254 120 2 23 275 74 325 1.34e-88 276
MS.gene069482.t1 MTR_3g033810 50.575 261 118 2 17 277 64 313 1.55e-88 272
MS.gene069482.t1 MTR_2g079550 48.846 260 131 2 18 277 74 331 8.24e-88 271
MS.gene069482.t1 MTR_3g033790 49.425 261 121 2 17 277 62 311 8.46e-88 270
MS.gene069482.t1 MTR_2g079580 48.462 260 132 2 18 277 76 333 9.42e-88 271
MS.gene069482.t1 MTR_2g022760 52.590 251 117 2 16 266 79 327 8.99e-87 268
MS.gene069482.t1 MTR_2g022710 47.909 263 135 2 15 277 76 336 2.50e-86 264
MS.gene069482.t1 MTR_2g022710 47.909 263 135 2 15 277 76 336 2.90e-86 264
MS.gene069482.t1 MTR_2g022710 48.462 260 132 2 18 277 79 336 3.23e-86 263
MS.gene069482.t1 MTR_2g022710 48.462 260 132 2 18 277 79 336 8.30e-86 264
MS.gene069482.t1 MTR_7g068900 50.612 245 119 1 36 280 17 259 8.68e-86 265
MS.gene069482.t1 MTR_4g016920 50.833 240 116 1 41 280 1 238 1.24e-85 258
MS.gene069482.t1 MTR_2g022710 47.909 263 135 2 15 277 76 336 1.69e-85 264
MS.gene069482.t1 MTR_2g022710 47.909 263 135 2 15 277 76 336 4.91e-85 264
MS.gene069482.t1 MTR_4g016920 50.833 240 116 1 41 280 1 238 3.38e-84 259
MS.gene069482.t1 MTR_4g131800 50.973 257 123 3 20 275 562 816 2.22e-82 267
MS.gene069482.t1 MTR_1g088630 47.638 254 106 4 23 275 74 301 2.48e-78 242
MS.gene069482.t1 MTR_1g088630 47.638 254 106 4 23 275 42 269 3.03e-77 242
MS.gene069482.t1 MTR_0108s0030 42.807 285 149 3 1 277 23 301 8.90e-77 241
MS.gene069482.t1 MTR_1g088630 52.294 218 101 2 23 239 74 289 2.29e-76 235
MS.gene069482.t1 MTR_7g033860 45.817 251 127 3 28 277 103 345 2.52e-76 241
MS.gene069482.t1 MTR_2g022710 46.835 237 124 2 41 277 1 235 4.49e-73 230
MS.gene069482.t1 MTR_0110s0020 56.522 184 77 2 18 201 87 267 5.36e-73 226
MS.gene069482.t1 MTR_2g022760 50.442 226 110 2 41 266 1 224 2.10e-72 228
MS.gene069482.t1 MTR_7g051610 47.410 251 124 3 28 277 123 366 2.51e-71 229
MS.gene069482.t1 MTR_7g051650 46.774 248 126 2 28 275 119 360 7.17e-71 228
MS.gene069482.t1 MTR_7g051650 46.774 248 126 2 28 275 123 364 8.54e-71 227
MS.gene069482.t1 MTR_7g051510 42.652 279 151 5 1 277 95 366 3.85e-66 215
MS.gene069482.t1 MTR_7g056747 44.628 242 127 2 35 275 9 244 1.44e-65 210
MS.gene069482.t1 MTR_8g038650 39.423 104 53 1 187 280 35 138 8.08e-18 79.0
MS.gene069482.t1 MTR_4g122980 30.952 126 83 2 37 159 183 307 2.61e-13 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069482.t1 AT2G44480 59.615 260 104 1 16 275 78 336 3.23e-117 346
MS.gene069482.t1 AT2G44480 59.073 259 105 1 16 274 109 366 3.96e-117 342
MS.gene069482.t1 AT2G44480 59.615 260 104 1 16 275 109 367 6.22e-117 347
MS.gene069482.t1 AT5G42260 59.004 261 106 1 16 275 74 334 4.36e-112 333
MS.gene069482.t1 AT1G47600 56.767 266 110 2 16 280 85 346 9.95e-112 332
MS.gene069482.t1 AT1G47600 56.767 266 110 2 16 280 85 346 1.47e-111 332
MS.gene069482.t1 AT2G25630 57.854 261 109 1 16 275 73 333 2.30e-110 328
MS.gene069482.t1 AT5G44640 57.854 261 109 1 16 275 74 334 8.21e-110 327
MS.gene069482.t1 AT1G51470 56.015 266 112 2 16 280 85 346 1.67e-109 326
MS.gene069482.t1 AT2G44450 56.538 260 113 0 16 275 74 333 5.80e-109 325
MS.gene069482.t1 AT2G44480 60.000 235 93 1 41 275 1 234 2.08e-107 318
MS.gene069482.t1 AT1G26560 57.088 261 110 1 17 277 75 333 2.30e-105 316
MS.gene069482.t1 AT3G60130 56.322 261 113 1 16 275 73 333 1.77e-104 313
MS.gene069482.t1 AT5G25980 53.516 256 118 1 20 275 95 349 1.35e-102 307
MS.gene069482.t1 AT5G25980 53.516 256 118 1 20 275 95 349 1.35e-102 307
MS.gene069482.t1 AT5G26000 55.078 256 115 0 20 275 83 338 1.52e-102 306
MS.gene069482.t1 AT5G26000 54.406 261 119 0 20 280 83 343 1.37e-101 307
MS.gene069482.t1 AT5G25980 53.516 256 118 1 20 275 95 349 1.39e-101 307
MS.gene069482.t1 AT5G24550 52.174 253 120 1 23 274 81 333 8.34e-100 302
MS.gene069482.t1 AT3G60140 52.174 253 120 1 23 274 75 327 1.69e-99 299
MS.gene069482.t1 AT5G54570 53.640 261 119 1 17 277 74 332 3.49e-99 298
MS.gene069482.t1 AT3G18080 52.809 267 123 2 11 277 76 339 7.20e-99 299
MS.gene069482.t1 AT3G60140 52.174 253 120 1 23 274 75 327 4.88e-98 299
MS.gene069482.t1 AT5G54570 53.640 261 119 1 17 277 74 332 5.13e-98 298
MS.gene069482.t1 AT3G60130 55.785 242 106 1 35 275 40 281 6.87e-98 295
MS.gene069482.t1 AT3G60130 55.785 242 106 1 35 275 40 281 1.86e-97 294
MS.gene069482.t1 AT3G60120 54.264 258 114 3 22 277 62 317 5.95e-96 292
MS.gene069482.t1 AT5G24540 53.150 254 116 2 23 274 81 333 1.15e-94 286
MS.gene069482.t1 AT2G44470 49.802 253 124 2 23 273 78 329 1.56e-94 284
MS.gene069482.t1 AT2G44470 49.802 253 124 2 23 273 78 329 4.70e-94 285
MS.gene069482.t1 AT1G02850 52.381 252 118 1 24 275 74 323 6.60e-94 286
MS.gene069482.t1 AT5G24540 53.150 254 116 2 23 274 81 333 2.24e-93 286
MS.gene069482.t1 AT3G03640 52.529 257 116 3 23 275 84 338 2.77e-93 285
MS.gene069482.t1 AT2G32860 50.570 263 129 1 16 277 137 399 1.15e-92 286
MS.gene069482.t1 AT2G44490 52.490 261 120 3 17 275 58 316 3.15e-92 283
MS.gene069482.t1 AT2G44470 49.802 253 124 2 23 273 78 329 3.81e-92 284
MS.gene069482.t1 AT2G32860 50.758 264 128 2 16 277 137 400 6.57e-92 284
MS.gene069482.t1 AT3G18070 48.689 267 132 3 11 277 67 328 4.08e-91 275
MS.gene069482.t1 AT1G60090 50.584 257 124 2 19 275 65 318 1.35e-90 278
MS.gene069482.t1 AT1G60090 50.584 257 124 2 19 275 65 318 2.30e-90 277
MS.gene069482.t1 AT1G02850 48.364 275 117 2 24 275 74 346 2.91e-90 275
MS.gene069482.t1 AT3G18070 48.689 267 126 3 11 277 67 322 2.97e-90 276
MS.gene069482.t1 AT3G09260 51.779 253 117 4 23 272 84 334 2.11e-89 275
MS.gene069482.t1 AT3G18070 48.689 267 132 3 11 277 67 328 2.51e-89 274
MS.gene069482.t1 AT2G44460 52.756 254 116 3 23 274 78 329 2.53e-89 276
MS.gene069482.t1 AT1G02850 48.364 275 117 2 24 275 74 346 2.99e-89 275
MS.gene069482.t1 AT1G02850 48.364 275 117 2 24 275 74 346 3.27e-89 275
MS.gene069482.t1 AT5G54570 54.008 237 107 1 41 277 1 235 1.06e-88 271
MS.gene069482.t1 AT4G22100 50.973 257 123 2 19 275 63 316 1.35e-88 273
MS.gene069482.t1 AT4G27830 49.012 253 127 1 23 275 71 321 2.06e-88 272
MS.gene069482.t1 AT1G51490 50.562 267 120 5 16 280 60 316 3.69e-88 268
MS.gene069482.t1 AT1G66280 53.150 254 111 5 23 272 85 334 7.14e-88 271
MS.gene069482.t1 AT1G61820 52.400 250 117 2 17 266 74 321 1.40e-87 270
MS.gene069482.t1 AT5G36890 49.049 263 123 2 11 273 53 304 2.83e-87 268
MS.gene069482.t1 AT5G36890 49.049 263 123 2 11 273 53 304 3.93e-87 268
MS.gene069482.t1 AT3G21370 50.394 254 120 4 23 272 82 333 1.19e-86 268
MS.gene069482.t1 AT1G60270 50.000 256 125 2 20 275 67 319 8.16e-86 261
MS.gene069482.t1 AT1G75940 48.438 256 127 3 23 274 86 340 2.05e-85 265
MS.gene069482.t1 AT1G61810 49.020 255 128 2 17 271 77 329 6.40e-85 261
MS.gene069482.t1 AT1G66270 51.575 254 115 5 23 272 85 334 6.46e-85 264
MS.gene069482.t1 AT4G27820 48.828 256 129 1 20 275 65 318 7.56e-85 263
MS.gene069482.t1 AT1G52400 47.893 261 127 4 20 275 85 341 1.03e-84 261
MS.gene069482.t1 AT1G52400 47.893 261 127 4 20 275 85 341 6.54e-84 261
MS.gene069482.t1 AT1G52400 47.893 261 127 4 20 275 85 341 6.54e-84 261
MS.gene069482.t1 AT5G48375 48.047 256 110 2 20 275 74 306 8.85e-84 258
MS.gene069482.t1 AT1G61810 49.020 255 128 2 17 271 77 329 1.04e-83 260
MS.gene069482.t1 AT1G61810 49.020 255 128 2 17 271 77 329 1.40e-83 261
MS.gene069482.t1 AT4G21760 45.896 268 143 2 10 277 90 355 3.25e-83 259
MS.gene069482.t1 AT4G21760 45.896 268 143 2 10 277 90 355 4.64e-83 259
MS.gene069482.t1 AT5G28510 49.225 258 121 5 23 272 88 343 5.83e-83 259
MS.gene069482.t1 AT1G02850 49.206 252 99 2 24 275 74 296 6.29e-83 257
MS.gene069482.t1 AT1G45191 47.826 253 129 2 23 275 74 323 6.83e-83 255
MS.gene069482.t1 AT1G45191 47.826 253 129 2 23 275 74 323 7.28e-83 255
MS.gene069482.t1 AT1G45191 47.826 253 129 2 23 275 74 323 3.87e-82 256
MS.gene069482.t1 AT1G45191 47.826 253 129 2 23 275 74 323 4.23e-82 256
MS.gene069482.t1 AT1G45191 47.826 253 129 2 23 275 74 323 4.27e-82 256
MS.gene069482.t1 AT1G45191 47.826 253 129 2 23 275 86 335 6.85e-82 256
MS.gene069482.t1 AT1G66270 51.181 254 114 6 23 272 85 332 7.93e-82 256
MS.gene069482.t1 AT3G62750 46.850 254 124 3 22 275 67 309 5.67e-81 249
MS.gene069482.t1 AT3G62750 46.850 254 124 3 22 275 67 309 5.67e-81 249
MS.gene069482.t1 AT3G62740 46.457 254 130 3 22 275 68 315 1.16e-80 249
MS.gene069482.t1 AT3G62750 46.850 254 124 3 22 275 93 335 6.62e-80 248
MS.gene069482.t1 AT3G62740 46.457 254 130 3 22 275 68 315 9.32e-80 249
MS.gene069482.t1 AT3G62750 46.850 254 124 3 22 275 93 335 1.39e-79 248
MS.gene069482.t1 AT3G62750 46.850 254 124 3 22 275 67 309 2.73e-79 248
MS.gene069482.t1 AT4G27830 47.660 235 121 1 41 275 1 233 6.68e-79 245
MS.gene069482.t1 AT3G62750 46.850 254 124 3 22 275 93 335 7.07e-79 248
MS.gene069482.t1 AT1G61810 50.442 226 110 2 17 242 77 300 2.28e-77 238
MS.gene069482.t1 AT1G60270 49.785 233 114 2 43 275 3 232 2.30e-76 234
MS.gene069482.t1 AT4G27820 48.085 235 120 1 41 275 1 233 8.98e-75 234
MS.gene069482.t1 AT4G27820 48.085 235 120 1 41 275 1 233 8.98e-75 234
MS.gene069482.t1 AT1G61810 49.561 228 113 2 44 271 4 229 3.47e-74 233
MS.gene069482.t1 AT3G62750 44.681 235 119 3 41 275 1 224 1.32e-68 218
MS.gene069482.t1 AT3G62750 44.681 235 119 3 41 275 1 224 1.32e-68 218
MS.gene069482.t1 AT2G44450 52.747 182 86 0 94 275 1 182 2.33e-68 216
MS.gene069482.t1 AT1G61820 50.556 180 88 1 87 266 4 182 2.45e-57 188
MS.gene069482.t1 AT2G44460 51.351 185 86 3 92 274 1 183 1.54e-54 182
MS.gene069482.t1 AT3G18070 50.327 153 75 1 125 277 100 251 6.20e-49 166
MS.gene069482.t1 AT3G18070 50.327 153 75 1 125 277 100 251 3.24e-48 166
MS.gene069482.t1 AT2G44480 54.545 132 59 1 146 277 2 132 9.66e-47 159
MS.gene069482.t1 AT3G18070 48.571 140 71 1 138 277 1 139 5.89e-42 144
MS.gene069482.t1 AT3G18070 48.571 140 71 1 138 277 1 139 4.41e-41 144
MS.gene069482.t1 AT5G16580 46.835 158 78 2 119 275 27 179 6.37e-37 133
MS.gene069482.t1 AT3G06510 27.322 183 118 6 36 211 159 333 1.23e-14 74.3
MS.gene069482.t1 AT3G06510 27.322 183 118 6 36 211 159 333 1.32e-14 73.9

Find 64 sgRNAs with CRISPR-Local

Find 178 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTGATACTTTGAGAATTT+TGG 0.091333 6.4:+53269365 None:intergenic
GAGCTTTGCTTTAAAGAATT+TGG 0.146112 6.4:-53271290 MS.gene069482:CDS
TTTCTTACTTGGAAGTATTC+TGG 0.217868 6.4:+53271999 None:intergenic
GAGGAAGGTCCCAATGAAAA+AGG 0.268527 6.4:+53271473 None:intergenic
GCCACTCTATGATACAAAAT+TGG 0.298973 6.4:-53270754 MS.gene069482:CDS
TGATTATGAGTCACTATATA+GGG 0.301091 6.4:+53271128 None:intergenic
AAGAATGTATTGCAGGTATA+TGG 0.303911 6.4:-53269447 MS.gene069482:intron
AGAGCCATTGATTTCATGTT+TGG 0.306421 6.4:-53270714 MS.gene069482:CDS
GATGTGAGTTACACTATATT+TGG 0.308617 6.4:+53271415 None:intergenic
TGATGAATACCATCGTTATA+AGG 0.309617 6.4:-53272204 MS.gene069482:intron
GCCAAGCATGCTTATGTTGA+TGG 0.330838 6.4:-53271221 MS.gene069482:CDS
AGCTTAGTGGAGGTGTAAAT+AGG 0.332322 6.4:-53271648 MS.gene069482:CDS
AAATTTCAAAAGGGCAAGAT+AGG 0.333322 6.4:-53270804 MS.gene069482:CDS
TTGATTATGAGTCACTATAT+AGG 0.356386 6.4:+53271127 None:intergenic
TGTCTACAAAACTAAGTATC+AGG 0.359104 6.4:-53271078 MS.gene069482:intron
TTGGTGATAGAGTAAAGAAT+TGG 0.378652 6.4:-53271271 MS.gene069482:CDS
GATGATCAAGGACATCAATA+TGG 0.390761 6.4:-53272049 MS.gene069482:CDS
GCTTAGTGGAGGTGTAAATA+GGG 0.402721 6.4:-53271647 MS.gene069482:CDS
TTCTTCATATATTCAATGTC+CGG 0.405124 6.4:-53272302 None:intergenic
TCACTTGAAGATGAATATAA+TGG 0.411889 6.4:-53271448 MS.gene069482:CDS
CAACCTCATCAATGAGTTGC+TGG 0.414002 6.4:-53271605 MS.gene069482:CDS
AAACTTGTCAGATAAAATAA+AGG 0.429402 6.4:-53272252 MS.gene069482:CDS
TATATGGATCCATTGACAAT+TGG 0.458276 6.4:-53269431 MS.gene069482:CDS
TTATACGCAGAAATTTCAAA+AGG 0.461398 6.4:-53270814 MS.gene069482:intron
AAAATAAAGGACAGAAGTAA+TGG 0.467864 6.4:-53272239 MS.gene069482:CDS
TGCCAGGACGAACATCGTCC+AGG 0.472398 6.4:+53271188 None:intergenic
CACCTGGACGATGTTCGTCC+TGG 0.480398 6.4:-53271190 MS.gene069482:CDS
TGGTAATCGACTCCCTACTA+AGG 0.483794 6.4:+53269385 None:intergenic
ATTGCAGAAGGAAAGCTTAG+TGG 0.495347 6.4:-53271661 MS.gene069482:intron
TCCATCAACATAAGCATGCT+TGG 0.501327 6.4:+53271220 None:intergenic
TATCAAGCAAAGCTTGTAAG+AGG 0.501813 6.4:-53269350 MS.gene069482:CDS
GGATAGTCTCCAATTGTCAA+TGG 0.507092 6.4:+53269422 None:intergenic
CCATCCAAACATGAAATCAA+TGG 0.508555 6.4:+53270710 None:intergenic
ACTAAGGATCTCATGGAGCT+TGG 0.509919 6.4:+53269401 None:intergenic
AATGTGATGGTGCTTTGAAC+CGG 0.510598 6.4:+53272283 None:intergenic
GTTGATGGAAGCTTCGCACC+TGG 0.514214 6.4:-53271206 MS.gene069482:CDS
GGATAACATTAGTGTGTCAC+TGG 0.520216 6.4:-53270782 MS.gene069482:CDS
AGCTCCATGAGATCCTTAGT+AGG 0.526973 6.4:-53269398 MS.gene069482:CDS
CCATTGATTTCATGTTTGGA+TGG 0.528755 6.4:-53270710 MS.gene069482:intron
TATACGCAGAAATTTCAAAA+GGG 0.528876 6.4:-53270813 MS.gene069482:intron
ACTCCCTACTAAGGATCTCA+TGG 0.543783 6.4:+53269394 None:intergenic
ATCAATGAGTTGCTGGCCAA+AGG 0.554170 6.4:-53271598 MS.gene069482:intron
CATCTTCAAGTGACTGAGGA+AGG 0.557265 6.4:+53271458 None:intergenic
GCATGCTTGGCGAAGGCCCA+TGG 0.558759 6.4:+53271233 None:intergenic
AAGTATTCTGGACCAAGAGA+TGG 0.559511 6.4:+53272011 None:intergenic
AACATAAGCATGCTTGGCGA+AGG 0.562738 6.4:+53271226 None:intergenic
TGGCAAAACTTGAATTGCAC+CGG 0.571841 6.4:-53271170 MS.gene069482:CDS
GTTTAATCCAATAAAATCAA+AGG 0.577644 6.4:+53269326 None:intergenic
AATTTCAAAAGGGCAAGATA+GGG 0.579565 6.4:-53270803 MS.gene069482:CDS
TGGCCAGCAACTCATTGATG+AGG 0.580800 6.4:+53271602 None:intergenic
GCTCCATGAGATCCTTAGTA+GGG 0.587979 6.4:-53269397 MS.gene069482:CDS
GGAAGATGTTGAGATGATCA+AGG 0.589270 6.4:-53272061 MS.gene069482:CDS
GATCACACTGAATGAACCAT+GGG 0.595444 6.4:-53271249 MS.gene069482:CDS
AGTGGAGGTGTAAATAGGGA+AGG 0.601364 6.4:-53271643 MS.gene069482:CDS
AACATTAGTGTGTCACTGGA+CGG 0.604605 6.4:-53270778 MS.gene069482:CDS
TTCAGTGGCAGAATCTCCAC+CGG 0.611444 6.4:+53271151 None:intergenic
GGATCACACTGAATGAACCA+TGG 0.617345 6.4:-53271250 MS.gene069482:CDS
CAAAACTTGAATTGCACCGG+TGG 0.620786 6.4:-53271167 MS.gene069482:CDS
AGTCACTATATAGGGTTCAG+TGG 0.627438 6.4:+53271136 None:intergenic
ATAACGATGGTATTCATCAA+CGG 0.630026 6.4:+53272208 None:intergenic
AGTTTAGCAGTAGAATGTGA+TGG 0.640780 6.4:+53272270 None:intergenic
TATTCATCTTCAAGTGACTG+AGG 0.648641 6.4:+53271454 None:intergenic
AGTATTGAACCTTATAACGA+TGG 0.651540 6.4:+53272195 None:intergenic
GCAGAAGGAAAGCTTAGTGG+AGG 0.668340 6.4:-53271658 MS.gene069482:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTATAATTATTATAAAT+TGG - chr6.4:53269724-53269743 MS.gene069482:intron 0.0%
!!! TAATAAAAATTTATTTTATT+TGG - chr6.4:53271188-53271207 MS.gene069482:CDS 0.0%
!! ATAAATACAATAACTATAAA+AGG + chr6.4:53271251-53271270 None:intergenic 10.0%
!! TAAAAAAAAATCTTATGAAA+AGG + chr6.4:53269685-53269704 None:intergenic 10.0%
!! TAATTAAATATCATAAAGTT+AGG - chr6.4:53270238-53270257 MS.gene069482:intron 10.0%
!! TTGTAAAAAAGTAATTATAA+AGG - chr6.4:53269809-53269828 MS.gene069482:intron 10.0%
!!! AAATATAAAAAATTTGGTTT+TGG + chr6.4:53271684-53271703 None:intergenic 10.0%
!!! AAATATAGAATATTTGATTT+TGG - chr6.4:53271488-53271507 MS.gene069482:CDS 10.0%
!!! AACCAAAAATATATTTTTAT+AGG + chr6.4:53271457-53271476 None:intergenic 10.0%
!!! ACCAAAAATATATTTTTATA+GGG + chr6.4:53271456-53271475 None:intergenic 10.0%
!! ATATTTAAGCCTAAAAATTA+TGG - chr6.4:53271779-53271798 MS.gene069482:intron 15.0%
!! ATCAAATATTCTATATTTAC+AGG + chr6.4:53271486-53271505 None:intergenic 15.0%
!! TATAAATTAAAGGAAAGTTT+AGG + chr6.4:53270786-53270805 None:intergenic 15.0%
!! TCAAATATTCTATATTTACA+GGG + chr6.4:53271485-53271504 None:intergenic 15.0%
!! TTAAAAATTAGGCTTAAATA+TGG - chr6.4:53271392-53271411 MS.gene069482:intron 15.0%
!! TTCAATTTACCTTAAAAATT+AGG - chr6.4:53271381-53271400 MS.gene069482:intron 15.0%
!!! ATATTTAAGCCTAATTTTTA+AGG + chr6.4:53271393-53271412 None:intergenic 15.0%
!!! ATGAAATAACCATAATTTTT+AGG + chr6.4:53271791-53271810 None:intergenic 15.0%
!!! CATCAATGTTTTTATTATTA+TGG + chr6.4:53269499-53269518 None:intergenic 15.0%
!!! TCCCTATAAAAATATATTTT+TGG - chr6.4:53271452-53271471 MS.gene069482:CDS 15.0%
!!! TCTCTGTAAAAATATTTTTT+TGG + chr6.4:53271720-53271739 None:intergenic 15.0%
!!! TTAATTATTTTTGGTCATAA+GGG + chr6.4:53270225-53270244 None:intergenic 15.0%
!!! TTTAATTATTTTTGGTCATA+AGG + chr6.4:53270226-53270245 None:intergenic 15.0%
!! AAACTTGTCAGATAAAATAA+AGG - chr6.4:53269363-53269382 MS.gene069482:CDS 20.0%
!! AATTTCTGCGTATAAATTAA+AGG + chr6.4:53270796-53270815 None:intergenic 20.0%
!! AGGACTAAAATGAATATTAT+AGG + chr6.4:53271567-53271586 None:intergenic 20.0%
!! ATAGTTATTGTATTTATCGA+AGG - chr6.4:53271254-53271273 MS.gene069482:CDS 20.0%
!! CAAATATTCTACATATTACA+AGG - chr6.4:53271606-53271625 MS.gene069482:CDS 20.0%
!! CAATTTCTATTTATATACGA+AGG - chr6.4:53271898-53271917 MS.gene069482:intron 20.0%
!! GGACTAAAATGAATATTATA+GGG + chr6.4:53271566-53271585 None:intergenic 20.0%
!! TAACATGTGTTCTTATAATA+AGG - chr6.4:53269763-53269782 MS.gene069482:intron 20.0%
!! TATGAACCTTAAATTATATG+TGG - chr6.4:53270941-53270960 MS.gene069482:intron 20.0%
!! TATTTAAAAGAATGTATTGC+AGG - chr6.4:53272161-53272180 MS.gene069482:intron 20.0%
!!! AAATTGATTCATATTGGATT+CGG + chr6.4:53271633-53271652 None:intergenic 20.0%
!!! ACCAAATTTTTTATATTTGC+AGG - chr6.4:53271686-53271705 MS.gene069482:intron 20.0%
!!! ATAAATAGAATTTTCTGTCT+TGG - chr6.4:53271119-53271138 MS.gene069482:CDS 20.0%
!!! ATAGATTTTCGAATTTAGAT+TGG - chr6.4:53270639-53270658 MS.gene069482:intron 20.0%
!!! CAATATGAAATGATTTTACA+AGG + chr6.4:53271535-53271554 None:intergenic 20.0%
!!! CAATATGAATCAATTTTACA+AGG - chr6.4:53271637-53271656 MS.gene069482:CDS 20.0%
!!! CATTGTTGACATTTTTTTTT+AGG - chr6.4:53271035-53271054 MS.gene069482:intron 20.0%
!!! CCAAATTTTTTATATTTGCA+GGG - chr6.4:53271687-53271706 MS.gene069482:intron 20.0%
!!! CTTGTAAAATTGATTCATAT+TGG + chr6.4:53271639-53271658 None:intergenic 20.0%
! AAAATAAAGGACAGAAGTAA+TGG - chr6.4:53269376-53269395 MS.gene069482:CDS 25.0%
! AATAAAAACATTGATGCTAG+AGG - chr6.4:53269503-53269522 MS.gene069482:intron 25.0%
! AGACATTATTGATATAATGC+AGG - chr6.4:53269533-53269552 MS.gene069482:intron 25.0%
! AGGATTAAAACAAAATACCA+AGG + chr6.4:53271515-53271534 None:intergenic 25.0%
! ATTACTTTACTAATTGCAGA+AGG - chr6.4:53269942-53269961 MS.gene069482:intron 25.0%
! ATTAGGCTTAAATATGGAAA+TGG - chr6.4:53271398-53271417 MS.gene069482:intron 25.0%
! CATTAAACTCTTAAAGAGAA+AGG - chr6.4:53270990-53271009 MS.gene069482:intron 25.0%
! CCCTGCAAATATAAAAAATT+TGG + chr6.4:53271690-53271709 None:intergenic 25.0%
! TAGTGAATAGTAGATTACTT+AGG + chr6.4:53272002-53272021 None:intergenic 25.0%
! TATACGCAGAAATTTCAAAA+GGG - chr6.4:53270802-53270821 MS.gene069482:CDS 25.0%
! TCAATTGTATCTATCAATGT+AGG - chr6.4:53270101-53270120 MS.gene069482:intron 25.0%
! TCACTTGAAGATGAATATAA+TGG - chr6.4:53270167-53270186 MS.gene069482:intron 25.0%
! TGAGTTCCACATATAATTTA+AGG + chr6.4:53270950-53270969 None:intergenic 25.0%
! TGATTATGAGTCACTATATA+GGG + chr6.4:53270490-53270509 None:intergenic 25.0%
! TTATACGCAGAAATTTCAAA+AGG - chr6.4:53270801-53270820 MS.gene069482:CDS 25.0%
! TTGATTATGAGTCACTATAT+AGG + chr6.4:53270491-53270510 None:intergenic 25.0%
!! AGGTCTAAAACAAAATATCA+AGG - chr6.4:53271657-53271676 MS.gene069482:CDS 25.0%
!! AGTTTATATTTGATGACCTT+TGG + chr6.4:53270036-53270055 None:intergenic 25.0%
!! CGAAGGAAAAAAATGTTTTA+TGG - chr6.4:53271271-53271290 MS.gene069482:CDS 25.0%
!! TCTTTAAGAGTTTAATGTCT+AGG + chr6.4:53270987-53271006 None:intergenic 25.0%
!!! TAAACTTGTTGGATTGATTT+CGG + chr6.4:53270666-53270685 None:intergenic 25.0%
!!! TTTTGTTACCCTTTTTCATT+GGG - chr6.4:53270133-53270152 MS.gene069482:intron 25.0%
!!! TTTTTTTTTAGGCTCAATGT+TGG - chr6.4:53271046-53271065 MS.gene069482:intron 25.0%
AAATTTCAAAAGGGCAAGAT+AGG - chr6.4:53270811-53270830 MS.gene069482:intron 30.0%
AAGAATGTATTGCAGGTATA+TGG - chr6.4:53272168-53272187 MS.gene069482:intron 30.0%
AATTCACATGTCTTAGACTT+GGG - chr6.4:53270592-53270611 MS.gene069482:intron 30.0%
AATTTCAAAAGGGCAAGATA+GGG - chr6.4:53270812-53270831 MS.gene069482:intron 30.0%
ACTAATCACGTGCAAAAATA+TGG - chr6.4:53271333-53271352 MS.gene069482:intron 30.0%
ATAACGATGGTATTCATCAA+CGG + chr6.4:53269410-53269429 None:intergenic 30.0%
ATACTTCCAAGTAAGAAACT+AGG - chr6.4:53269621-53269640 MS.gene069482:intron 30.0%
CAAAATGTCAGATATTTGCA+GGG - chr6.4:53271747-53271766 MS.gene069482:intron 30.0%
CAATGAAAAAGGGTAACAAA+AGG + chr6.4:53270134-53270153 None:intergenic 30.0%
GATGTGAGTTACACTATATT+TGG + chr6.4:53270203-53270222 None:intergenic 30.0%
GGTTAACTTAGATAAGTAGA+TGG - chr6.4:53271354-53271373 MS.gene069482:intron 30.0%
TACACATGGAAATAGTTAGA+GGG + chr6.4:53270282-53270301 None:intergenic 30.0%
TACTTCCAAGTAAGAAACTA+GGG - chr6.4:53269622-53269641 MS.gene069482:intron 30.0%
TATATGGATCCATTGACAAT+TGG - chr6.4:53272184-53272203 MS.gene069482:intron 30.0%
TGATGAATACCATCGTTATA+AGG - chr6.4:53269411-53269430 MS.gene069482:CDS 30.0%
TGTCTACAAAACTAAGTATC+AGG - chr6.4:53270537-53270556 MS.gene069482:intron 30.0%
! ACACACAAATTAAAGCATCA+TGG + chr6.4:53269460-53269479 None:intergenic 30.0%
! AGTATTGAACCTTATAACGA+TGG + chr6.4:53269423-53269442 None:intergenic 30.0%
! CTTATAGATTTTCCATCTCT+TGG - chr6.4:53269592-53269611 MS.gene069482:intron 30.0%
! TCCAATTTTGTATCATAGAG+TGG + chr6.4:53270865-53270884 None:intergenic 30.0%
! TTGGTGATAGAGTAAAGAAT+TGG - chr6.4:53270344-53270363 MS.gene069482:intron 30.0%
!! AAGAGGTCCTTTGATTTTAT+TGG - chr6.4:53272282-53272301 MS.gene069482:CDS 30.0%
!! CATTTTAGTCCTCATTTTGA+GGG - chr6.4:53271575-53271594 MS.gene069482:intron 30.0%
!! CTTTTGTTACCCTTTTTCAT+TGG - chr6.4:53270132-53270151 MS.gene069482:intron 30.0%
!! GAATATTTGATTTTGGTCCT+TGG - chr6.4:53271495-53271514 MS.gene069482:CDS 30.0%
!! GAGCTTTGCTTTAAAGAATT+TGG - chr6.4:53270325-53270344 MS.gene069482:intron 30.0%
!! GCTTGATACTTTGAGAATTT+TGG + chr6.4:53272253-53272272 None:intergenic 30.0%
!! TCATTTTAGTCCTCATTTTG+AGG - chr6.4:53271574-53271593 MS.gene069482:intron 30.0%
!! TTTCTTACTTGGAAGTATTC+TGG + chr6.4:53269619-53269638 None:intergenic 30.0%
!!! GCATTTTGATTCTTGTTAAC+CGG - chr6.4:53271068-53271087 MS.gene069482:intron 30.0%
AAATGGTCCCTGCAAATATA+TGG - chr6.4:53271415-53271434 MS.gene069482:intron 35.0%
AGTGATCAATCTGGTGATAT+GGG + chr6.4:53271316-53271335 None:intergenic 35.0%
AGTTTAGCAGTAGAATGTGA+TGG + chr6.4:53269348-53269367 None:intergenic 35.0%
ATATTTCAACATGTGCCCTA+AGG - chr6.4:53269881-53269900 MS.gene069482:intron 35.0%
CAAAACGCCATATATTTGCA+GGG + chr6.4:53271425-53271444 None:intergenic 35.0%
CAATTCACATGTCTTAGACT+TGG - chr6.4:53270591-53270610 MS.gene069482:intron 35.0%
CCAAAATGTCAGATATTTGC+AGG - chr6.4:53271746-53271765 MS.gene069482:intron 35.0%
CCATCCAAACATGAAATCAA+TGG + chr6.4:53270908-53270927 None:intergenic 35.0%
CTACACATGGAAATAGTTAG+AGG + chr6.4:53270283-53270302 None:intergenic 35.0%
CTCTAACTATTTCCATGTGT+AGG - chr6.4:53270281-53270300 MS.gene069482:intron 35.0%
GATGATCAAGGACATCAATA+TGG - chr6.4:53269566-53269585 MS.gene069482:intron 35.0%
GCCACTCTATGATACAAAAT+TGG - chr6.4:53270861-53270880 MS.gene069482:intron 35.0%
TAGTGATCAATCTGGTGATA+TGG + chr6.4:53271317-53271336 None:intergenic 35.0%
TATCAAGCAAAGCTTGTAAG+AGG - chr6.4:53272265-53272284 MS.gene069482:CDS 35.0%
TATTCATCTTCAAGTGACTG+AGG + chr6.4:53270164-53270183 None:intergenic 35.0%
TCACTACATCTTCAAACATG+TGG + chr6.4:53272088-53272107 None:intergenic 35.0%
TCGAAAATCATTCCTACACA+TGG + chr6.4:53270296-53270315 None:intergenic 35.0%
! AAATGCTAACTTGTGCCTTA+GGG + chr6.4:53269899-53269918 None:intergenic 35.0%
! CCTGCAAATATCTGACATTT+TGG + chr6.4:53271749-53271768 None:intergenic 35.0%
! GGCTAAGAGACATTTTCTTT+TGG - chr6.4:53269643-53269662 MS.gene069482:intron 35.0%
!! AGAGCCATTGATTTCATGTT+TGG - chr6.4:53270901-53270920 MS.gene069482:intron 35.0%
!! CCATTGATTTCATGTTTGGA+TGG - chr6.4:53270905-53270924 MS.gene069482:intron 35.0%
!! GATTTTAGTCCCTCAAAATG+AGG + chr6.4:53271587-53271606 None:intergenic 35.0%
AAGTATTCTGGACCAAGAGA+TGG + chr6.4:53269607-53269626 None:intergenic 40.0%
AGGAAGGTCCCAATGAAAAA+GGG + chr6.4:53270144-53270163 None:intergenic 40.0%
AGTCACTATATAGGGTTCAG+TGG + chr6.4:53270482-53270501 None:intergenic 40.0%
ATTGCAGAAGGAAAGCTTAG+TGG - chr6.4:53269954-53269973 MS.gene069482:intron 40.0%
CACGTGATTAGTGATCAATC+TGG + chr6.4:53271325-53271344 None:intergenic 40.0%
CCAAAACGCCATATATTTGC+AGG + chr6.4:53271426-53271445 None:intergenic 40.0%
CTCTCGCTATGTAAACTTGT+TGG + chr6.4:53270677-53270696 None:intergenic 40.0%
CTTAGCCCTAGTTTCTTACT+TGG + chr6.4:53269630-53269649 None:intergenic 40.0%
GATCACACTGAATGAACCAT+GGG - chr6.4:53270366-53270385 MS.gene069482:intron 40.0%
GGAAGATGTTGAGATGATCA+AGG - chr6.4:53269554-53269573 MS.gene069482:intron 40.0%
GGATAACATTAGTGTGTCAC+TGG - chr6.4:53270833-53270852 MS.gene069482:intron 40.0%
GGATAGTCTCCAATTGTCAA+TGG + chr6.4:53272196-53272215 None:intergenic 40.0%
TCCATCAACATAAGCATGCT+TGG + chr6.4:53270398-53270417 None:intergenic 40.0%
TGGCAAAACTTGAATTGCAC+CGG - chr6.4:53270445-53270464 MS.gene069482:intron 40.0%
! AACATTAGTGTGTCACTGGA+CGG - chr6.4:53270837-53270856 MS.gene069482:intron 40.0%
! AATGTGATGGTGCTTTGAAC+CGG + chr6.4:53269335-53269354 None:intergenic 40.0%
! AGCTTAGTGGAGGTGTAAAT+AGG - chr6.4:53269967-53269986 MS.gene069482:intron 40.0%
! CCTGCAAATATATGGCGTTT+TGG - chr6.4:53271423-53271442 MS.gene069482:intron 40.0%
! GAAATGCTAACTTGTGCCTT+AGG + chr6.4:53269900-53269919 None:intergenic 40.0%
! GCTTAGTGGAGGTGTAAATA+GGG - chr6.4:53269968-53269987 MS.gene069482:intron 40.0%
AACATAAGCATGCTTGGCGA+AGG + chr6.4:53270392-53270411 None:intergenic 45.0%
ACTAAGGATCTCATGGAGCT+TGG + chr6.4:53272217-53272236 None:intergenic 45.0%
ACTCCCTACTAAGGATCTCA+TGG + chr6.4:53272224-53272243 None:intergenic 45.0%
AGAATGTTAATCAGTGCCCC+GGG + chr6.4:53271228-53271247 None:intergenic 45.0%
AGCTCCATGAGATCCTTAGT+AGG - chr6.4:53272217-53272236 MS.gene069482:CDS 45.0%
ATCAATGAGTTGCTGGCCAA+AGG - chr6.4:53270017-53270036 MS.gene069482:intron 45.0%
CAAAACTTGAATTGCACCGG+TGG - chr6.4:53270448-53270467 MS.gene069482:intron 45.0%
CAACCTCATCAATGAGTTGC+TGG - chr6.4:53270010-53270029 MS.gene069482:intron 45.0%
CATCTTCAAGTGACTGAGGA+AGG + chr6.4:53270160-53270179 None:intergenic 45.0%
GAGAATGTTAATCAGTGCCC+CGG + chr6.4:53271229-53271248 None:intergenic 45.0%
GAGGAAGGTCCCAATGAAAA+AGG + chr6.4:53270145-53270164 None:intergenic 45.0%
GCCAAGCATGCTTATGTTGA+TGG - chr6.4:53270394-53270413 MS.gene069482:intron 45.0%
GCTCCATGAGATCCTTAGTA+GGG - chr6.4:53272218-53272237 MS.gene069482:CDS 45.0%
GGATCACACTGAATGAACCA+TGG - chr6.4:53270365-53270384 MS.gene069482:intron 45.0%
! AGTGGAGGTGTAAATAGGGA+AGG - chr6.4:53269972-53269991 MS.gene069482:intron 45.0%
! TGGTAATCGACTCCCTACTA+AGG + chr6.4:53272233-53272252 None:intergenic 45.0%
!! GGTGCAATTCAAGTTTTGCC+AGG + chr6.4:53270446-53270465 None:intergenic 45.0%
!!! TTATGATATTTAATTATTTT+TGG + chr6.4:53270234-53270253 None:intergenic 5.0%
AGATTCCTTAACCAGTGCCC+CGG + chr6.4:53271099-53271118 None:intergenic 50.0%
GAATGTTAATCAGTGCCCCG+GGG + chr6.4:53271227-53271246 None:intergenic 50.0%
GCAGAAGGAAAGCTTAGTGG+AGG - chr6.4:53269957-53269976 MS.gene069482:intron 50.0%
TGGCCAGCAACTCATTGATG+AGG + chr6.4:53270016-53270035 None:intergenic 50.0%
TTCAGTGGCAGAATCTCCAC+CGG + chr6.4:53270467-53270486 None:intergenic 50.0%
! TTGGTGCTTAACCAATGCCC+CGG - chr6.4:53271207-53271226 MS.gene069482:CDS 50.0%
ATTCCTTAACCAGTGCCCCG+GGG + chr6.4:53271097-53271116 None:intergenic 55.0%
GATTCCTTAACCAGTGCCCC+GGG + chr6.4:53271098-53271117 None:intergenic 55.0%
TGGTGCTTAACCAATGCCCC+GGG - chr6.4:53271208-53271227 MS.gene069482:CDS 55.0%
TTCTTGTTAACCGGTGCCCC+CGG - chr6.4:53271077-53271096 MS.gene069482:intron 55.0%
! GTTGATGGAAGCTTCGCACC+TGG - chr6.4:53270409-53270428 MS.gene069482:intron 55.0%
CACCTGGACGATGTTCGTCC+TGG - chr6.4:53270425-53270444 MS.gene069482:intron 60.0%
GGTGCTTAACCAATGCCCCG+GGG - chr6.4:53271209-53271228 MS.gene069482:CDS 60.0%
TAATCAGTGCCCCGGGGCAT+TGG + chr6.4:53271221-53271240 None:intergenic 60.0%
TCTTGTTAACCGGTGCCCCC+GGG - chr6.4:53271078-53271097 MS.gene069482:intron 60.0%
TGCCAGGACGAACATCGTCC+AGG + chr6.4:53270430-53270449 None:intergenic 60.0%
TTCCTTAACCAGTGCCCCGG+GGG + chr6.4:53271096-53271115 None:intergenic 60.0%
CTTGTTAACCGGTGCCCCCG+GGG - chr6.4:53271079-53271098 MS.gene069482:CDS 65.0%
GCATGCTTGGCGAAGGCCCA+TGG + chr6.4:53270385-53270404 None:intergenic 65.0%
!! TGCCCCCGGGGCACTGGTTA+AGG - chr6.4:53271091-53271110 MS.gene069482:CDS 70.0%
! AACCAGTGCCCCGGGGGCAC+CGG + chr6.4:53271090-53271109 None:intergenic 75.0%
! AACCGGTGCCCCCGGGGCAC+TGG - chr6.4:53271085-53271104 MS.gene069482:CDS 80.0%


Chromosome Type Strat End Strand Name
chr6.4 gene 53269328 53272309 53269328 ID=MS.gene069482
chr6.4 mRNA 53269328 53272309 53269328 ID=MS.gene069482.t1;Parent=MS.gene069482
chr6.4 exon 53272205 53272309 53272205 ID=MS.gene069482.t1.exon1;Parent=MS.gene069482.t1
chr6.4 CDS 53272205 53272309 53272205 ID=cds.MS.gene069482.t1;Parent=MS.gene069482.t1
chr6.4 exon 53272007 53272082 53272007 ID=MS.gene069482.t1.exon2;Parent=MS.gene069482.t1
chr6.4 CDS 53272007 53272082 53272007 ID=cds.MS.gene069482.t1;Parent=MS.gene069482.t1
chr6.4 exon 53271599 53271676 53271599 ID=MS.gene069482.t1.exon3;Parent=MS.gene069482.t1
chr6.4 CDS 53271599 53271676 53271599 ID=cds.MS.gene069482.t1;Parent=MS.gene069482.t1
chr6.4 exon 53271427 53271514 53271427 ID=MS.gene069482.t1.exon4;Parent=MS.gene069482.t1
chr6.4 CDS 53271427 53271514 53271427 ID=cds.MS.gene069482.t1;Parent=MS.gene069482.t1
chr6.4 exon 53271079 53271334 53271079 ID=MS.gene069482.t1.exon5;Parent=MS.gene069482.t1
chr6.4 CDS 53271079 53271334 53271079 ID=cds.MS.gene069482.t1;Parent=MS.gene069482.t1
chr6.4 exon 53270711 53270826 53270711 ID=MS.gene069482.t1.exon6;Parent=MS.gene069482.t1
chr6.4 CDS 53270711 53270826 53270711 ID=cds.MS.gene069482.t1;Parent=MS.gene069482.t1
chr6.4 exon 53269328 53269454 53269328 ID=MS.gene069482.t1.exon7;Parent=MS.gene069482.t1
chr6.4 CDS 53269328 53269454 53269328 ID=cds.MS.gene069482.t1;Parent=MS.gene069482.t1
Gene Sequence

>MS.gene069482

ATGTCCGGTTCAAAGCACCATCACATTCTACTGCTAAACTTGTCAGATAAAATAAAGGACAGAAGTAATGGAGACATAGCCGTTGATGAATACCATCGTTATAAGGTTCAATACTATGCTCTATCATGTCCATGATGCTTTAATTTGTGTGTTGATAATATTAATACTCCATAATAATAAAAACATTGATGCTAGAGGATAATTAAGACATTATTGATATAATGCAGGAAGATGTTGAGATGATCAAGGACATCAATATGGATGCTTATAGATTTTCCATCTCTTGGTCCAGAATACTTCCAAGTAAGAAACTAGGGCTAAGAGACATTTTCTTTTGGAAACTTTTGAACATTACCTTTTCATAAGATTTTTTTTTAATGTTTATAATTGATAATAAATTTATAATTATTATAAATTGGCAAATTCTTATCATGCTAACATGTGTTCTTATAATAAGGTTTTTACAAGTAGTAAATATTTATTGTAAAAAAGTAATTATAAAGGACTTGAAAAATAAATTTGCACAATTTTCAATACATAATTTTCATTAATAATATTTCAACATGTGCCCTAAGGCACAAGTTAGCATTTCTCAATTCTTATTTACATGTTGAATTACTTTACTAATTGCAGAAGGAAAGCTTAGTGGAGGTGTAAATAGGGAAGGAATTAAGTATTACAACAACCTCATCAATGAGTTGCTGGCCAAAGGTCATCAAATATAAACTTAATGTTTGTCTTTTTTGTTTTCAATTATTTTTGTCTAAAATACTTCAATTGTATCTATCAATGTAGGTCTTCAACCTTTTGTTACCCTTTTTCATTGGGACCTTCCTCAGTCACTTGAAGATGAATATAATGGCTTTTTAAGTCCAAATATAGTGTAACTCACATCCCTTATGACCAAAAATAATTAAATATCATAAAGTTAGGCATATCATCATGTGTTTTCCCTCTAACTATTTCCATGTGTAGGAATGATTTTCGAGACTATGCAGAGCTTTGCTTTAAAGAATTTGGTGATAGAGTAAAGAATTGGATCACACTGAATGAACCATGGGCCTTCGCCAAGCATGCTTATGTTGATGGAAGCTTCGCACCTGGACGATGTTCGTCCTGGCAAAACTTGAATTGCACCGGTGGAGATTCTGCCACTGAACCCTATATAGTGACTCATAATCAAATACTTGCTCATGCATCTGCTGTCAATGTCTACAAAACTAAGTATCAGGTATTATTTTATTTTAACTAAAAGAATTATATCAATTCACATGTCTTAGACTTGGGTTATGCACTATATATGACTGTATGATAGATTTTCGAATTTAGATTGGACCGAAATCAATCCAACAAGTTTACATAGCGAGAGTTGCTAGCAAGACTATTTTTTAATACTCTCTAGCACTCACTCTTATTCTAACAAGTGTTTCTTATCATTTAATATTTACATTGAGACCTAAACTTTCCTTTAATTTATACGCAGAAATTTCAAAAGGGCAAGATAGGGATAACATTAGTGTGTCACTGGACGGTGCCACTCTATGATACAAAATTGGATCATCATGCTTCACAAAGAGCCATTGATTTCATGTTTGGATGGTAATTAAGTACTTTATGAACCTTAAATTATATGTGGAACTCAACTACAATAATTATCCTAGACATTAAACTCTTAAAGAGAAAGGCTGAGCGTAAAACAGTGTAGCTCATTGTTGACATTTTTTTTTAGGCTCAATGTTGGCATTTTGATTCTTGTTAACCGGTGCCCCCGGGGCACTGGTTAAGGAATCTATAAATAGAATTTTCTGTCTTGGAGATATAAACTGTCACTTTTTATTAAGTAATAATTACATTACTTTTTAATAAAAATTTATTTTATTTGGTGCTTAACCAATGCCCCGGGGCACTGATTAACATTCTCCTTTTATAGTTATTGTATTTATCGAAGGAAAAAAATGTTTTATGGACATCTACTTTTTTAAACACCCATATCACCAGATTGATCACTAATCACGTGCAAAAATATGGTTAACTTAGATAAGTAGATGGTTAGTTCAATTTACCTTAAAAATTAGGCTTAAATATGGAAATGGTCCCTGCAAATATATGGCGTTTTGGTTTTAATCCCTATAAAAATATATTTTTGGTTTTAGTCCCTGTAAATATAGAATATTTGATTTTGGTCCTTGGTATTTTGTTTTAATCCTTGTAAAATCATTTCATATTGAAATTTGTCCCTATAATATTCATTTTAGTCCTCATTTTGAGGGACTAAAATCAAATATTCTACATATTACAAGGACCGAATCCAATATGAATCAATTTTACAAGGTCTAAAACAAAATATCAAGGACCAAAACCAAATTTTTTATATTTGCAGGGACTAAAACCAAAAAAATATTTTTACAGAGACTAAAACCAAAATGTCAGATATTTGCAGGGACTATTTTCATATTTAAGCCTAAAAATTATGGTTATTTCATGTAGTTGAATTAATCACAATTTGATTGTCAATTATTAATATTATGATTGAATGAAATAGTTAGTTCATAGATTGAATATTGAATGTACAATTTCTATTTATATACGAAGGAGACTCTATGCGCTAGCTTATTGTGTAAGTAATCACACATGATTACTAAACTAAACTAACTAACTAGATAACTTGTTGCCTAAGTAATCTACTATTCACTAATCTATTCACTATCATCTTCATTTGCAATAATTAAGTTAATCATCTATTCAATTGAATTATAACCACATGTTTGAAGATGTAGTGAGCATGTGCAAAAAGAAAATGTTGTATATGTATCATTACTCTTATCAAAGTAGCTATTTAAAAGAATGTATTGCAGGTATATGGATCCATTGACAATTGGAGACTATCCAAGCTCCATGAGATCCTTAGTAGGGAGTCGATTACCAAAATTCTCAAAGTATCAAGCAAAGCTTGTAAGAGGTCCTTTGATTTTATTGGATTAA

Protein sequence

>MS.gene069482.t1

MSGSKHHHILLLNLSDKIKDRSNGDIAVDEYHRYKEDVEMIKDINMDAYRFSISWSRILPKGKLSGGVNREGIKYYNNLINELLAKGLQPFVTLFHWDLPQSLEDEYNGFLSPNIVNDFRDYAELCFKEFGDRVKNWITLNEPWAFAKHAYVDGSFAPGRCSSWQNLNCTGGDSATEPYIVTHNQILAHASAVNVYKTKYQKFQKGKIGITLVCHWTVPLYDTKLDHHASQRAIDFMFGWYMDPLTIGDYPSSMRSLVGSRLPKFSKYQAKLVRGPLILLD