Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68999.t1 | XP_003620654.1 | 66.4 | 110 | 5 | 1 | 1 | 78 | 866 | 975 | 1.20E-26 | 128.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68999.t1 | P74070 | 44.5 | 110 | 28 | 1 | 1 | 77 | 20 | 129 | 1.5e-17 | 89.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68999.t1 | G7KPU0 | 66.4 | 110 | 5 | 1 | 1 | 78 | 866 | 975 | 8.9e-27 | 128.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene68999 | 0.810915 | 9.09E-51 | -1.69E-46 |
| MS.gene049159 | MS.gene68999 | 0.805669 | 1.19E-49 | -1.69E-46 |
| MS.gene049254 | MS.gene68999 | 0.852708 | 3.87E-61 | -1.69E-46 |
| MS.gene049343 | MS.gene68999 | 0.809067 | 2.27E-50 | -1.69E-46 |
| MS.gene049404 | MS.gene68999 | 0.83101 | 2.13E-55 | -1.69E-46 |
| MS.gene049435 | MS.gene68999 | 0.803935 | 2.75E-49 | -1.69E-46 |
| MS.gene049452 | MS.gene68999 | 0.814122 | 1.81E-51 | -1.69E-46 |
| MS.gene049531 | MS.gene68999 | 0.805232 | 1.47E-49 | -1.69E-46 |
| MS.gene049669 | MS.gene68999 | 0.81014 | 1.34E-50 | -1.69E-46 |
| MS.gene049711 | MS.gene68999 | 0.815037 | 1.13E-51 | -1.69E-46 |
| MS.gene049825 | MS.gene68999 | 0.808738 | 2.67E-50 | -1.69E-46 |
| MS.gene049850 | MS.gene68999 | 0.827837 | 1.25E-54 | -1.69E-46 |
| MS.gene049873 | MS.gene68999 | 0.81667 | 4.91E-52 | -1.69E-46 |
| MS.gene050026 | MS.gene68999 | 0.876334 | 1.52E-68 | -1.69E-46 |
| MS.gene050029 | MS.gene68999 | 0.812277 | 4.60E-51 | -1.69E-46 |
| MS.gene050043 | MS.gene68999 | 0.808284 | 3.34E-50 | -1.69E-46 |
| MS.gene050073 | MS.gene68999 | 0.800494 | 1.40E-48 | -1.69E-46 |
| MS.gene050156 | MS.gene68999 | 0.823488 | 1.35E-53 | -1.69E-46 |
| MS.gene050273 | MS.gene68999 | 0.809353 | 1.97E-50 | -1.69E-46 |
| MS.gene050355 | MS.gene68999 | 0.845153 | 4.85E-59 | -1.69E-46 |
| MS.gene050442 | MS.gene68999 | 0.807537 | 4.82E-50 | -1.69E-46 |
| MS.gene050559 | MS.gene68999 | 0.812291 | 4.56E-51 | -1.69E-46 |
| MS.gene050561 | MS.gene68999 | 0.817438 | 3.30E-52 | -1.69E-46 |
| MS.gene050562 | MS.gene68999 | 0.810147 | 1.33E-50 | -1.69E-46 |
| MS.gene050750 | MS.gene68999 | 0.828184 | 1.03E-54 | -1.69E-46 |
| MS.gene050759 | MS.gene68999 | 0.815632 | 8.37E-52 | -1.69E-46 |
| MS.gene050826 | MS.gene68999 | 0.802533 | 5.36E-49 | -1.69E-46 |
| MS.gene050953 | MS.gene68999 | 0.828128 | 1.07E-54 | -1.69E-46 |
| MS.gene050962 | MS.gene68999 | 0.804801 | 1.81E-49 | -1.69E-46 |
| MS.gene051181 | MS.gene68999 | 0.831253 | 1.85E-55 | -1.69E-46 |
| MS.gene051190 | MS.gene68999 | 0.807027 | 6.18E-50 | -1.69E-46 |
| MS.gene051198 | MS.gene68999 | 0.819825 | 9.47E-53 | -1.69E-46 |
| MS.gene051247 | MS.gene68999 | 0.845795 | 3.25E-59 | -1.69E-46 |
| MS.gene051265 | MS.gene68999 | 0.806094 | 9.72E-50 | -1.69E-46 |
| MS.gene051279 | MS.gene68999 | 0.855151 | 7.65E-62 | -1.69E-46 |
| MS.gene051332 | MS.gene68999 | 0.814698 | 1.35E-51 | -1.69E-46 |
| MS.gene051388 | MS.gene68999 | 0.811173 | 7.99E-51 | -1.69E-46 |
| MS.gene051574 | MS.gene68999 | 0.822609 | 2.16E-53 | -1.69E-46 |
| MS.gene051594 | MS.gene68999 | 0.824405 | 8.22E-54 | -1.69E-46 |
| MS.gene051719 | MS.gene68999 | 0.851581 | 8.08E-61 | -1.69E-46 |
| MS.gene051720 | MS.gene68999 | 0.8504 | 1.74E-60 | -1.69E-46 |
| MS.gene051744 | MS.gene68999 | 0.837606 | 4.71E-57 | -1.69E-46 |
| MS.gene051957 | MS.gene68999 | 0.824674 | 7.10E-54 | -1.69E-46 |
| MS.gene052037 | MS.gene68999 | 0.803123 | 4.05E-49 | -1.69E-46 |
| MS.gene052190 | MS.gene68999 | 0.823848 | 1.11E-53 | -1.69E-46 |
| MS.gene052208 | MS.gene68999 | 0.808298 | 3.32E-50 | -1.69E-46 |
| MS.gene052333 | MS.gene68999 | 0.829418 | 5.21E-55 | -1.69E-46 |
| MS.gene052463 | MS.gene68999 | 0.822528 | 2.26E-53 | -1.69E-46 |
| MS.gene052488 | MS.gene68999 | 0.814046 | 1.88E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene68999 | 0.858945 | 5.81E-63 | -1.69E-46 |
| MS.gene052534 | MS.gene68999 | 0.803149 | 4.00E-49 | -1.69E-46 |
| MS.gene052561 | MS.gene68999 | 0.800768 | 1.23E-48 | -1.69E-46 |
| MS.gene052582 | MS.gene68999 | 0.870906 | 1.02E-66 | -1.69E-46 |
| MS.gene052584 | MS.gene68999 | 0.873083 | 1.94E-67 | -1.69E-46 |
| MS.gene052586 | MS.gene68999 | 0.825813 | 3.82E-54 | -1.69E-46 |
| MS.gene052685 | MS.gene68999 | 0.812482 | 4.15E-51 | -1.69E-46 |
| MS.gene052768 | MS.gene68999 | 0.811956 | 5.40E-51 | -1.69E-46 |
| MS.gene052773 | MS.gene68999 | 0.835425 | 1.69E-56 | -1.69E-46 |
| MS.gene052829 | MS.gene68999 | 0.817363 | 3.43E-52 | -1.69E-46 |
| MS.gene052863 | MS.gene68999 | 0.809452 | 1.88E-50 | -1.69E-46 |
| MS.gene052867 | MS.gene68999 | 0.811776 | 5.91E-51 | -1.69E-46 |
| MS.gene052896 | MS.gene68999 | 0.80474 | 1.87E-49 | -1.69E-46 |
| MS.gene053054 | MS.gene68999 | -0.81348 | 2.51E-51 | -1.69E-46 |
| MS.gene053145 | MS.gene68999 | 0.806592 | 7.63E-50 | -1.69E-46 |
| MS.gene053147 | MS.gene68999 | 0.801276 | 9.72E-49 | -1.69E-46 |
| MS.gene053166 | MS.gene68999 | 0.810592 | 1.07E-50 | -1.69E-46 |
| MS.gene053221 | MS.gene68999 | 0.838048 | 3.62E-57 | -1.69E-46 |
| MS.gene053226 | MS.gene68999 | 0.8542 | 1.44E-61 | -1.69E-46 |
| MS.gene053592 | MS.gene68999 | 0.809097 | 2.24E-50 | -1.69E-46 |
| MS.gene053599 | MS.gene68999 | 0.802121 | 6.52E-49 | -1.69E-46 |
| MS.gene05365 | MS.gene68999 | 0.827252 | 1.73E-54 | -1.69E-46 |
| MS.gene053883 | MS.gene68999 | 0.812761 | 3.60E-51 | -1.69E-46 |
| MS.gene053974 | MS.gene68999 | 0.803514 | 3.36E-49 | -1.69E-46 |
| MS.gene05414 | MS.gene68999 | 0.832681 | 8.23E-56 | -1.69E-46 |
| MS.gene05415 | MS.gene68999 | 0.851775 | 7.12E-61 | -1.69E-46 |
| MS.gene05422 | MS.gene68999 | 0.825214 | 5.30E-54 | -1.69E-46 |
| MS.gene054236 | MS.gene68999 | 0.833092 | 6.50E-56 | -1.69E-46 |
| MS.gene05423 | MS.gene68999 | 0.856371 | 3.37E-62 | -1.69E-46 |
| MS.gene054291 | MS.gene68999 | -0.873798 | 1.11E-67 | -1.69E-46 |
| MS.gene054405 | MS.gene68999 | 0.825749 | 3.96E-54 | -1.69E-46 |
| MS.gene054467 | MS.gene68999 | 0.820943 | 5.25E-53 | -1.69E-46 |
| MS.gene054468 | MS.gene68999 | 0.83765 | 4.59E-57 | -1.69E-46 |
| MS.gene054559 | MS.gene68999 | 0.812089 | 5.05E-51 | -1.69E-46 |
| MS.gene054576 | MS.gene68999 | 0.824915 | 6.23E-54 | -1.69E-46 |
| MS.gene05458 | MS.gene68999 | 0.804805 | 1.81E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene68999 | 0.860766 | 1.64E-63 | -1.69E-46 |
| MS.gene054775 | MS.gene68999 | 0.850662 | 1.47E-60 | -1.69E-46 |
| MS.gene054801 | MS.gene68999 | 0.807467 | 4.98E-50 | -1.69E-46 |
| MS.gene054991 | MS.gene68999 | 0.843803 | 1.12E-58 | -1.69E-46 |
| MS.gene055056 | MS.gene68999 | 0.80642 | 8.30E-50 | -1.69E-46 |
| MS.gene055166 | MS.gene68999 | 0.819894 | 9.14E-53 | -1.69E-46 |
| MS.gene055227 | MS.gene68999 | 0.840252 | 9.73E-58 | -1.69E-46 |
| MS.gene055228 | MS.gene68999 | 0.840458 | 8.59E-58 | -1.69E-46 |
| MS.gene055356 | MS.gene68999 | 0.805184 | 1.51E-49 | -1.69E-46 |
| MS.gene055357 | MS.gene68999 | 0.82889 | 6.99E-55 | -1.69E-46 |
| MS.gene055465 | MS.gene68999 | 0.80539 | 1.37E-49 | -1.69E-46 |
| MS.gene055466 | MS.gene68999 | 0.829719 | 4.40E-55 | -1.69E-46 |
| MS.gene055586 | MS.gene68999 | 0.809006 | 2.34E-50 | -1.69E-46 |
| MS.gene055589 | MS.gene68999 | 0.807195 | 5.69E-50 | -1.69E-46 |
| MS.gene055725 | MS.gene68999 | 0.802131 | 6.49E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene68999 | 0.832097 | 1.15E-55 | -1.69E-46 |
| MS.gene055818 | MS.gene68999 | 0.842976 | 1.86E-58 | -1.69E-46 |
| MS.gene055926 | MS.gene68999 | 0.830134 | 3.48E-55 | -1.69E-46 |
| MS.gene05604 | MS.gene68999 | 0.833504 | 5.13E-56 | -1.69E-46 |
| MS.gene056050 | MS.gene68999 | 0.841095 | 5.85E-58 | -1.69E-46 |
| MS.gene056162 | MS.gene68999 | 0.812575 | 3.96E-51 | -1.69E-46 |
| MS.gene056173 | MS.gene68999 | 0.826137 | 3.20E-54 | -1.69E-46 |
| MS.gene056174 | MS.gene68999 | 0.855356 | 6.67E-62 | -1.69E-46 |
| MS.gene056252 | MS.gene68999 | 0.800401 | 1.47E-48 | -1.69E-46 |
| MS.gene056366 | MS.gene68999 | 0.840001 | 1.13E-57 | -1.69E-46 |
| MS.gene056373 | MS.gene68999 | 0.811451 | 6.96E-51 | -1.69E-46 |
| MS.gene056506 | MS.gene68999 | 0.809824 | 1.56E-50 | -1.69E-46 |
| MS.gene056595 | MS.gene68999 | 0.828501 | 8.68E-55 | -1.69E-46 |
| MS.gene056776 | MS.gene68999 | 0.805008 | 1.64E-49 | -1.69E-46 |
| MS.gene056792 | MS.gene68999 | 0.803967 | 2.71E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene68999 | 0.823064 | 1.69E-53 | -1.69E-46 |
| MS.gene05690 | MS.gene68999 | 0.809801 | 1.58E-50 | -1.69E-46 |
| MS.gene057012 | MS.gene68999 | 0.826645 | 2.42E-54 | -1.69E-46 |
| MS.gene057021 | MS.gene68999 | 0.818256 | 2.16E-52 | -1.69E-46 |
| MS.gene057026 | MS.gene68999 | 0.824625 | 7.29E-54 | -1.69E-46 |
| MS.gene057027 | MS.gene68999 | 0.81147 | 6.89E-51 | -1.69E-46 |
| MS.gene057060 | MS.gene68999 | 0.812046 | 5.16E-51 | -1.69E-46 |
| MS.gene057208 | MS.gene68999 | 0.825896 | 3.65E-54 | -1.69E-46 |
| MS.gene057314 | MS.gene68999 | 0.817305 | 3.53E-52 | -1.69E-46 |
| MS.gene057414 | MS.gene68999 | 0.823791 | 1.15E-53 | -1.69E-46 |
| MS.gene057444 | MS.gene68999 | 0.847122 | 1.41E-59 | -1.69E-46 |
| MS.gene057598 | MS.gene68999 | 0.804574 | 2.02E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene68999 | 0.814025 | 1.90E-51 | -1.69E-46 |
| MS.gene057921 | MS.gene68999 | 0.808144 | 3.58E-50 | -1.69E-46 |
| MS.gene058009 | MS.gene68999 | 0.806262 | 8.96E-50 | -1.69E-46 |
| MS.gene058037 | MS.gene68999 | 0.838731 | 2.42E-57 | -1.69E-46 |
| MS.gene058294 | MS.gene68999 | 0.804114 | 2.52E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene68999 | 0.852146 | 5.59E-61 | -1.69E-46 |
| MS.gene058636 | MS.gene68999 | 0.820107 | 8.17E-53 | -1.69E-46 |
| MS.gene058829 | MS.gene68999 | 0.812785 | 3.56E-51 | -1.69E-46 |
| MS.gene058979 | MS.gene68999 | 0.839602 | 1.44E-57 | -1.69E-46 |
| MS.gene058984 | MS.gene68999 | 0.807433 | 5.07E-50 | -1.69E-46 |
| MS.gene059015 | MS.gene68999 | 0.811059 | 8.46E-51 | -1.69E-46 |
| MS.gene059084 | MS.gene68999 | 0.819636 | 1.05E-52 | -1.69E-46 |
| MS.gene05925 | MS.gene68999 | 0.802798 | 4.73E-49 | -1.69E-46 |
| MS.gene059272 | MS.gene68999 | 0.86276 | 4.03E-64 | -1.69E-46 |
| MS.gene059276 | MS.gene68999 | 0.83462 | 2.70E-56 | -1.69E-46 |
| MS.gene059439 | MS.gene68999 | 0.801628 | 8.23E-49 | -1.69E-46 |
| MS.gene059458 | MS.gene68999 | 0.803765 | 2.98E-49 | -1.69E-46 |
| MS.gene059459 | MS.gene68999 | 0.804325 | 2.28E-49 | -1.69E-46 |
| MS.gene059460 | MS.gene68999 | 0.812788 | 3.55E-51 | -1.69E-46 |
| MS.gene05954 | MS.gene68999 | 0.833116 | 6.42E-56 | -1.69E-46 |
| MS.gene059570 | MS.gene68999 | 0.807855 | 4.12E-50 | -1.69E-46 |
| MS.gene059584 | MS.gene68999 | 0.855948 | 4.48E-62 | -1.69E-46 |
| MS.gene059601 | MS.gene68999 | 0.854371 | 1.29E-61 | -1.69E-46 |
| MS.gene059602 | MS.gene68999 | 0.847123 | 1.41E-59 | -1.69E-46 |
| MS.gene059625 | MS.gene68999 | 0.854345 | 1.31E-61 | -1.69E-46 |
| MS.gene059842 | MS.gene68999 | 0.80972 | 1.65E-50 | -1.69E-46 |
| MS.gene060011 | MS.gene68999 | 0.806722 | 7.17E-50 | -1.69E-46 |
| MS.gene060137 | MS.gene68999 | -0.809652 | 1.70E-50 | -1.69E-46 |
| MS.gene060257 | MS.gene68999 | 0.804125 | 2.51E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene68999 | 0.833191 | 6.14E-56 | -1.69E-46 |
| MS.gene060352 | MS.gene68999 | 0.80264 | 5.10E-49 | -1.69E-46 |
| MS.gene060373 | MS.gene68999 | 0.819137 | 1.36E-52 | -1.69E-46 |
| MS.gene060521 | MS.gene68999 | 0.849377 | 3.36E-60 | -1.69E-46 |
| MS.gene06052 | MS.gene68999 | 0.825669 | 4.13E-54 | -1.69E-46 |
| MS.gene060572 | MS.gene68999 | 0.809814 | 1.57E-50 | -1.69E-46 |
| MS.gene060634 | MS.gene68999 | -0.837337 | 5.52E-57 | -1.69E-46 |
| MS.gene060879 | MS.gene68999 | 0.809838 | 1.55E-50 | -1.69E-46 |
| MS.gene061040 | MS.gene68999 | -0.82226 | 2.61E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68999.t1 | MTR_6g088270 | 66.364 | 110 | 5 | 1 | 1 | 78 | 866 | 975 | 2.22e-38 | 134 |
| MS.gene68999.t1 | MTR_6g088270 | 48.182 | 110 | 25 | 1 | 1 | 78 | 625 | 734 | 1.81e-24 | 95.1 |
| MS.gene68999.t1 | MTR_6g488290 | 64.706 | 68 | 6 | 1 | 1 | 50 | 60 | 127 | 4.92e-19 | 76.6 |
| MS.gene68999.t1 | MTR_0428s0020 | 64.706 | 68 | 6 | 1 | 1 | 50 | 60 | 127 | 8.51e-19 | 76.6 |
| MS.gene68999.t1 | MTR_2g039790 | 56.000 | 75 | 14 | 2 | 1 | 56 | 37 | 111 | 2.46e-18 | 73.9 |
| MS.gene68999.t1 | MTR_6g087300 | 52.439 | 82 | 34 | 2 | 1 | 78 | 226 | 306 | 8.15e-15 | 67.4 |
| MS.gene68999.t1 | MTR_6g066260 | 63.265 | 49 | 18 | 0 | 26 | 74 | 48 | 96 | 1.68e-14 | 62.8 |
| MS.gene68999.t1 | MTR_2g039780 | 61.538 | 52 | 6 | 1 | 27 | 78 | 100 | 137 | 4.01e-12 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68999.t1 | AT4G29060 | 57.273 | 110 | 15 | 1 | 1 | 78 | 773 | 882 | 4.24e-29 | 108 |
| MS.gene68999.t1 | AT4G29060 | 50.000 | 110 | 23 | 1 | 1 | 78 | 535 | 644 | 1.68e-25 | 98.2 |
| MS.gene68999.t1 | AT4G29060 | 49.091 | 110 | 18 | 2 | 1 | 78 | 535 | 638 | 1.27e-21 | 87.0 |
Find 17 sgRNAs with CRISPR-Local
Find 23 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCTTCGTCACAATAGTTT+CGG | 0.269335 | 6.2:-87029504 | None:intergenic |
| GCAAGCATACCTCAGGAAAA+AGG | 0.286057 | 6.2:+87029269 | MS.gene68999:CDS |
| TCCTTCGTCACAATAGTTTC+GGG | 0.358591 | 6.2:-87029503 | None:intergenic |
| AGGTCTTCTCATTGCATCTC+AGG | 0.406127 | 6.2:-87029533 | None:intergenic |
| GCAAGTTGGTGCTTGTCCTC+AGG | 0.427821 | 6.2:+87029454 | MS.gene68999:CDS |
| TAATAAAGCTCTTGCTGAAA+CGG | 0.448622 | 6.2:+87029227 | MS.gene68999:CDS |
| AACGGAAGGCGAACTTGAAA+AGG | 0.487147 | 6.2:+87029245 | MS.gene68999:CDS |
| CTCACTTCTGCCAACAAAGT+CGG | 0.506846 | 6.2:-87029399 | None:intergenic |
| TGGCAGAAGTGAGAAATTCA+AGG | 0.527151 | 6.2:+87029409 | MS.gene68999:CDS |
| AAGTGAGAAATTCAAGGAGT+TGG | 0.528224 | 6.2:+87029415 | MS.gene68999:CDS |
| AACTGTGAAACCGACTTTGT+TGG | 0.542867 | 6.2:+87029389 | MS.gene68999:CDS |
| AAAAGGCGCAAGCATACCTC+AGG | 0.548541 | 6.2:+87029262 | MS.gene68999:CDS |
| ATATCTTCAATAGATACAAA+CGG | 0.551658 | 6.2:-87029479 | None:intergenic |
| GATGATCTTGCAATGCAAGT+TGG | 0.583957 | 6.2:+87029440 | MS.gene68999:CDS |
| TCCCGAAACTATTGTGACGA+AGG | 0.603689 | 6.2:+87029502 | MS.gene68999:CDS |
| AAAGCTCTTGCTGAAACGGA+AGG | 0.608476 | 6.2:+87029231 | MS.gene68999:CDS |
| ATAGATACAAACGGAACCTG+AGG | 0.668908 | 6.2:-87029470 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATCTTCAATAGATACAAA+CGG | - | chr6.2:87029482-87029501 | None:intergenic | 20.0% |
| TAATAAAGCTCTTGCTGAAA+CGG | + | chr6.2:87029227-87029246 | MS.gene68999:CDS | 30.0% | |
| AAGTGAGAAATTCAAGGAGT+TGG | + | chr6.2:87029415-87029434 | MS.gene68999:CDS | 35.0% | |
| TTCCTTCGTCACAATAGTTT+CGG | - | chr6.2:87029507-87029526 | None:intergenic | 35.0% | |
| ATAGATACAAACGGAACCTG+AGG | - | chr6.2:87029473-87029492 | None:intergenic | 40.0% | |
| CAAGCATACCTCAGGAAAAA+GGG | + | chr6.2:87029270-87029289 | MS.gene68999:CDS | 40.0% | |
| GATGATCTTGCAATGCAAGT+TGG | + | chr6.2:87029440-87029459 | MS.gene68999:CDS | 40.0% | |
| GTACATACATTCACGATGCA+CGG | + | chr6.2:87029345-87029364 | MS.gene68999:intron | 40.0% | |
| GTCTTCGGATTTCTTATCAG+CGG | - | chr6.2:87029304-87029323 | None:intergenic | 40.0% | |
| TCCTTCGTCACAATAGTTTC+GGG | - | chr6.2:87029506-87029525 | None:intergenic | 40.0% | |
| TGGCAGAAGTGAGAAATTCA+AGG | + | chr6.2:87029409-87029428 | MS.gene68999:CDS | 40.0% | |
| ! | AACTGTGAAACCGACTTTGT+TGG | + | chr6.2:87029389-87029408 | MS.gene68999:CDS | 40.0% |
| !! | TTCCTTCAGTTGCTAGTCTT+CGG | - | chr6.2:87029319-87029338 | None:intergenic | 40.0% |
| AAAGCTCTTGCTGAAACGGA+AGG | + | chr6.2:87029231-87029250 | MS.gene68999:CDS | 45.0% | |
| AACGGAAGGCGAACTTGAAA+AGG | + | chr6.2:87029245-87029264 | MS.gene68999:CDS | 45.0% | |
| ATCCGAAGACTAGCAACTGA+AGG | + | chr6.2:87029314-87029333 | MS.gene68999:intron | 45.0% | |
| CTCACTTCTGCCAACAAAGT+CGG | - | chr6.2:87029402-87029421 | None:intergenic | 45.0% | |
| GCAAGCATACCTCAGGAAAA+AGG | + | chr6.2:87029269-87029288 | MS.gene68999:CDS | 45.0% | |
| TACATTCACGATGCACGGAT+CGG | + | chr6.2:87029350-87029369 | MS.gene68999:intron | 45.0% | |
| TCCCGAAACTATTGTGACGA+AGG | + | chr6.2:87029502-87029521 | MS.gene68999:CDS | 45.0% | |
| ! | ATGAGAGACCCTTTTTCCTG+AGG | - | chr6.2:87029281-87029300 | None:intergenic | 45.0% |
| ! | AAAAGGCGCAAGCATACCTC+AGG | + | chr6.2:87029262-87029281 | MS.gene68999:CDS | 50.0% |
| !! | GCAAGTTGGTGCTTGTCCTC+AGG | + | chr6.2:87029454-87029473 | MS.gene68999:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 87029216 | 87029547 | 87029216 | ID=MS.gene68999 |
| chr6.2 | mRNA | 87029216 | 87029547 | 87029216 | ID=MS.gene68999.t1;Parent=MS.gene68999 |
| chr6.2 | exon | 87029216 | 87029291 | 87029216 | ID=MS.gene68999.t1.exon1;Parent=MS.gene68999.t1 |
| chr6.2 | CDS | 87029216 | 87029291 | 87029216 | ID=cds.MS.gene68999.t1;Parent=MS.gene68999.t1 |
| chr6.2 | exon | 87029387 | 87029547 | 87029387 | ID=MS.gene68999.t1.exon2;Parent=MS.gene68999.t1 |
| chr6.2 | CDS | 87029387 | 87029547 | 87029387 | ID=cds.MS.gene68999.t1;Parent=MS.gene68999.t1 |
| Gene Sequence |
| Protein sequence |
