Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31397.t1 | XP_013465204.2 | 81.6 | 196 | 35 | 1 | 696 | 890 | 701 | 896 | 3.00E-76 | 297 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31397.t1 | Q5XV31 | 30.9 | 149 | 96 | 4 | 729 | 871 | 561 | 708 | 8.1e-06 | 54.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31397.t1 | G7ZVK0 | 81.6 | 196 | 35 | 1 | 696 | 890 | 700 | 895 | 2.1e-76 | 297.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene31397 | 0.828758 | 7.52E-55 | -1.69E-46 |
| MS.gene049404 | MS.gene31397 | 0.809518 | 1.82E-50 | -1.69E-46 |
| MS.gene049435 | MS.gene31397 | 0.84148 | 4.63E-58 | -1.69E-46 |
| MS.gene049452 | MS.gene31397 | 0.807957 | 3.92E-50 | -1.69E-46 |
| MS.gene049958 | MS.gene31397 | 0.813155 | 2.95E-51 | -1.69E-46 |
| MS.gene050026 | MS.gene31397 | 0.805024 | 1.63E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene31397 | 0.815972 | 7.03E-52 | -1.69E-46 |
| MS.gene050227 | MS.gene31397 | 0.826397 | 2.77E-54 | -1.69E-46 |
| MS.gene050228 | MS.gene31397 | 0.824715 | 6.95E-54 | -1.69E-46 |
| MS.gene050442 | MS.gene31397 | 0.84277 | 2.11E-58 | -1.69E-46 |
| MS.gene050680 | MS.gene31397 | 0.853115 | 2.96E-61 | -1.69E-46 |
| MS.gene050724 | MS.gene31397 | 0.804286 | 2.32E-49 | -1.69E-46 |
| MS.gene050750 | MS.gene31397 | 0.817849 | 2.66E-52 | -1.69E-46 |
| MS.gene050759 | MS.gene31397 | 0.807722 | 4.40E-50 | -1.69E-46 |
| MS.gene050787 | MS.gene31397 | 0.809692 | 1.67E-50 | -1.69E-46 |
| MS.gene050826 | MS.gene31397 | 0.806417 | 8.31E-50 | -1.69E-46 |
| MS.gene050953 | MS.gene31397 | 0.819269 | 1.27E-52 | -1.69E-46 |
| MS.gene051181 | MS.gene31397 | 0.808391 | 3.17E-50 | -1.69E-46 |
| MS.gene051198 | MS.gene31397 | 0.83995 | 1.17E-57 | -1.69E-46 |
| MS.gene051265 | MS.gene31397 | 0.811766 | 5.94E-51 | -1.69E-46 |
| MS.gene051368 | MS.gene31397 | 0.834109 | 3.62E-56 | -1.69E-46 |
| MS.gene051594 | MS.gene31397 | 0.810768 | 9.78E-51 | -1.69E-46 |
| MS.gene052042 | MS.gene31397 | 0.815725 | 7.98E-52 | -1.69E-46 |
| MS.gene052190 | MS.gene31397 | 0.867708 | 1.12E-65 | -1.69E-46 |
| MS.gene052323 | MS.gene31397 | 0.801718 | 7.89E-49 | -1.69E-46 |
| MS.gene052333 | MS.gene31397 | 0.847448 | 1.15E-59 | -1.69E-46 |
| MS.gene052519 | MS.gene31397 | 0.82564 | 4.20E-54 | -1.69E-46 |
| MS.gene052582 | MS.gene31397 | 0.8065 | 7.98E-50 | -1.69E-46 |
| MS.gene052584 | MS.gene31397 | 0.80482 | 1.80E-49 | -1.69E-46 |
| MS.gene052586 | MS.gene31397 | 0.801929 | 7.14E-49 | -1.69E-46 |
| MS.gene052611 | MS.gene31397 | 0.802365 | 5.81E-49 | -1.69E-46 |
| MS.gene052863 | MS.gene31397 | 0.823378 | 1.43E-53 | -1.69E-46 |
| MS.gene052867 | MS.gene31397 | 0.813341 | 2.69E-51 | -1.69E-46 |
| MS.gene052896 | MS.gene31397 | 0.814497 | 1.49E-51 | -1.69E-46 |
| MS.gene05289 | MS.gene31397 | 0.809442 | 1.89E-50 | -1.69E-46 |
| MS.gene053008 | MS.gene31397 | 0.825433 | 4.70E-54 | -1.69E-46 |
| MS.gene053147 | MS.gene31397 | 0.810181 | 1.31E-50 | -1.69E-46 |
| MS.gene053166 | MS.gene31397 | 0.834881 | 2.32E-56 | -1.69E-46 |
| MS.gene053221 | MS.gene31397 | 0.808161 | 3.55E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene31397 | 0.811862 | 5.66E-51 | -1.69E-46 |
| MS.gene053584 | MS.gene31397 | 0.812288 | 4.57E-51 | -1.69E-46 |
| MS.gene05414 | MS.gene31397 | 0.81211 | 5.00E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene31397 | 0.814337 | 1.62E-51 | -1.69E-46 |
| MS.gene054236 | MS.gene31397 | 0.834377 | 3.11E-56 | -1.69E-46 |
| MS.gene054291 | MS.gene31397 | -0.873936 | 9.99E-68 | -1.69E-46 |
| MS.gene054405 | MS.gene31397 | 0.814414 | 1.56E-51 | -1.69E-46 |
| MS.gene054467 | MS.gene31397 | 0.849461 | 3.19E-60 | -1.69E-46 |
| MS.gene054468 | MS.gene31397 | 0.856783 | 2.55E-62 | -1.69E-46 |
| MS.gene054559 | MS.gene31397 | 0.816094 | 6.60E-52 | -1.69E-46 |
| MS.gene054581 | MS.gene31397 | 0.813294 | 2.75E-51 | -1.69E-46 |
| MS.gene054610 | MS.gene31397 | 0.812852 | 3.44E-51 | -1.69E-46 |
| MS.gene054775 | MS.gene31397 | 0.825582 | 4.33E-54 | -1.69E-46 |
| MS.gene054801 | MS.gene31397 | 0.801366 | 9.32E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene31397 | 0.80192 | 7.17E-49 | -1.69E-46 |
| MS.gene05510 | MS.gene31397 | 0.803047 | 4.20E-49 | -1.69E-46 |
| MS.gene055227 | MS.gene31397 | 0.816047 | 6.76E-52 | -1.69E-46 |
| MS.gene055228 | MS.gene31397 | 0.81247 | 4.17E-51 | -1.69E-46 |
| MS.gene055356 | MS.gene31397 | 0.853307 | 2.61E-61 | -1.69E-46 |
| MS.gene055357 | MS.gene31397 | 0.847455 | 1.14E-59 | -1.69E-46 |
| MS.gene055358 | MS.gene31397 | 0.841596 | 4.32E-58 | -1.69E-46 |
| MS.gene055701 | MS.gene31397 | 0.849032 | 4.20E-60 | -1.69E-46 |
| MS.gene055818 | MS.gene31397 | 0.835793 | 1.36E-56 | -1.69E-46 |
| MS.gene055926 | MS.gene31397 | 0.825726 | 4.01E-54 | -1.69E-46 |
| MS.gene05604 | MS.gene31397 | 0.812912 | 3.34E-51 | -1.69E-46 |
| MS.gene056173 | MS.gene31397 | 0.809067 | 2.27E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene31397 | 0.817229 | 3.68E-52 | -1.69E-46 |
| MS.gene056506 | MS.gene31397 | 0.857809 | 1.27E-62 | -1.69E-46 |
| MS.gene056792 | MS.gene31397 | 0.812851 | 3.44E-51 | -1.69E-46 |
| MS.gene057012 | MS.gene31397 | 0.808343 | 3.25E-50 | -1.69E-46 |
| MS.gene057026 | MS.gene31397 | 0.83316 | 6.26E-56 | -1.69E-46 |
| MS.gene057314 | MS.gene31397 | 0.819226 | 1.30E-52 | -1.69E-46 |
| MS.gene057444 | MS.gene31397 | 0.819263 | 1.27E-52 | -1.69E-46 |
| MS.gene057598 | MS.gene31397 | 0.800295 | 1.54E-48 | -1.69E-46 |
| MS.gene057693 | MS.gene31397 | 0.804389 | 2.21E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene31397 | 0.817781 | 2.76E-52 | -1.69E-46 |
| MS.gene058548 | MS.gene31397 | 0.803717 | 3.05E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene31397 | 0.823512 | 1.33E-53 | -1.69E-46 |
| MS.gene058829 | MS.gene31397 | 0.802053 | 6.73E-49 | -1.69E-46 |
| MS.gene058935 | MS.gene31397 | 0.802325 | 5.92E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene31397 | 0.833443 | 5.32E-56 | -1.69E-46 |
| MS.gene059128 | MS.gene31397 | 0.846205 | 2.51E-59 | -1.69E-46 |
| MS.gene059161 | MS.gene31397 | 0.834393 | 3.08E-56 | -1.69E-46 |
| MS.gene059306 | MS.gene31397 | 0.804904 | 1.73E-49 | -1.69E-46 |
| MS.gene059607 | MS.gene31397 | 0.811584 | 6.51E-51 | -1.69E-46 |
| MS.gene059609 | MS.gene31397 | 0.829144 | 6.07E-55 | -1.69E-46 |
| MS.gene059789 | MS.gene31397 | 0.823687 | 1.21E-53 | -1.69E-46 |
| MS.gene060011 | MS.gene31397 | 0.833516 | 5.10E-56 | -1.69E-46 |
| MS.gene060137 | MS.gene31397 | -0.823186 | 1.59E-53 | -1.69E-46 |
| MS.gene060310 | MS.gene31397 | 0.812164 | 4.86E-51 | -1.69E-46 |
| MS.gene060322 | MS.gene31397 | 0.863545 | 2.31E-64 | -1.69E-46 |
| MS.gene06052 | MS.gene31397 | 0.826843 | 2.17E-54 | -1.69E-46 |
| MS.gene060683 | MS.gene31397 | 0.823407 | 1.41E-53 | -1.69E-46 |
| MS.gene060685 | MS.gene31397 | 0.825027 | 5.86E-54 | -1.69E-46 |
| MS.gene060802 | MS.gene31397 | 0.825683 | 4.10E-54 | -1.69E-46 |
| MS.gene060803 | MS.gene31397 | 0.813047 | 3.12E-51 | -1.69E-46 |
| MS.gene061040 | MS.gene31397 | -0.827941 | 1.18E-54 | -1.69E-46 |
| MS.gene061114 | MS.gene31397 | -0.831018 | 2.12E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31397.t1 | MTR_2g091015 | 91.973 | 897 | 62 | 4 | 2 | 890 | 1 | 895 | 0.0 | 1542 |
| MS.gene31397.t1 | MTR_2g091280 | 62.032 | 748 | 209 | 8 | 2 | 703 | 1 | 719 | 0.0 | 724 |
| MS.gene31397.t1 | MTR_2g093010 | 44.869 | 916 | 395 | 15 | 1 | 883 | 1 | 839 | 0.0 | 577 |
| MS.gene31397.t1 | MTR_2g093010 | 44.896 | 911 | 393 | 14 | 6 | 883 | 4 | 838 | 0.0 | 576 |
| MS.gene31397.t1 | MTR_2g091250 | 52.027 | 740 | 271 | 11 | 210 | 876 | 476 | 1204 | 0.0 | 568 |
| MS.gene31397.t1 | MTR_2g091250 | 42.327 | 808 | 326 | 17 | 8 | 716 | 19 | 785 | 8.76e-132 | 427 |
| MS.gene31397.t1 | MTR_7g056313 | 78.426 | 394 | 60 | 2 | 2 | 395 | 1 | 369 | 0.0 | 543 |
| MS.gene31397.t1 | MTR_7g056313 | 46.835 | 237 | 82 | 4 | 300 | 532 | 173 | 369 | 6.20e-36 | 140 |
| MS.gene31397.t1 | MTR_7g056313 | 50.510 | 196 | 96 | 1 | 422 | 616 | 174 | 369 | 2.23e-35 | 139 |
| MS.gene31397.t1 | MTR_7g056313 | 38.194 | 288 | 138 | 7 | 404 | 682 | 113 | 369 | 4.98e-28 | 117 |
| MS.gene31397.t1 | MTR_7g056313 | 34.711 | 242 | 117 | 7 | 486 | 698 | 114 | 343 | 1.32e-14 | 77.0 |
| MS.gene31397.t1 | MTR_2g091110 | 43.968 | 887 | 330 | 19 | 125 | 876 | 357 | 1211 | 5.27e-157 | 494 |
| MS.gene31397.t1 | MTR_2g091110 | 42.657 | 715 | 322 | 11 | 68 | 702 | 42 | 748 | 4.19e-113 | 376 |
| MS.gene31397.t1 | MTR_2g091110 | 43.349 | 639 | 250 | 12 | 148 | 696 | 280 | 896 | 1.69e-97 | 333 |
| MS.gene31397.t1 | MTR_2g091110 | 43.023 | 602 | 263 | 9 | 149 | 684 | 349 | 936 | 4.26e-93 | 320 |
| MS.gene31397.t1 | MTR_2g091080 | 41.156 | 882 | 328 | 19 | 38 | 866 | 18 | 761 | 1.31e-145 | 449 |
| MS.gene31397.t1 | MTR_2g091335 | 57.303 | 445 | 169 | 6 | 5 | 436 | 3 | 439 | 5.79e-142 | 434 |
| MS.gene31397.t1 | MTR_2g091335 | 56.907 | 485 | 148 | 12 | 393 | 863 | 167 | 604 | 8.37e-134 | 413 |
| MS.gene31397.t1 | MTR_2g091325 | 49.728 | 551 | 224 | 8 | 2 | 503 | 1 | 547 | 5.96e-139 | 426 |
| MS.gene31397.t1 | MTR_2g091325 | 47.368 | 456 | 139 | 10 | 314 | 719 | 167 | 571 | 1.06e-84 | 283 |
| MS.gene31397.t1 | MTR_3g110385 | 40.736 | 842 | 354 | 16 | 68 | 890 | 34 | 749 | 1.15e-133 | 420 |
| MS.gene31397.t1 | MTR_2g091260 | 50.169 | 590 | 220 | 12 | 343 | 881 | 225 | 791 | 4.14e-128 | 407 |
| MS.gene31397.t1 | MTR_2g091260 | 38.916 | 609 | 246 | 15 | 6 | 504 | 4 | 596 | 1.60e-72 | 256 |
| MS.gene31397.t1 | MTR_2g091260 | 30.400 | 250 | 145 | 5 | 133 | 357 | 368 | 613 | 4.53e-12 | 70.5 |
| MS.gene31397.t1 | MTR_5g078510 | 52.473 | 465 | 165 | 7 | 466 | 881 | 3 | 460 | 2.93e-124 | 386 |
| MS.gene31397.t1 | MTR_5g078510 | 45.015 | 331 | 149 | 4 | 243 | 570 | 1 | 301 | 3.55e-47 | 177 |
| MS.gene31397.t1 | MTR_5g078510 | 41.083 | 314 | 148 | 5 | 199 | 511 | 2 | 279 | 1.38e-28 | 122 |
| MS.gene31397.t1 | MTR_5g078510 | 38.538 | 301 | 144 | 8 | 148 | 448 | 3 | 262 | 5.19e-22 | 101 |
| MS.gene31397.t1 | MTR_5g078510 | 33.808 | 281 | 141 | 10 | 102 | 366 | 20 | 271 | 1.62e-13 | 74.7 |
| MS.gene31397.t1 | MTR_2g091285 | 57.568 | 403 | 150 | 4 | 2 | 384 | 1 | 402 | 3.89e-123 | 385 |
| MS.gene31397.t1 | MTR_2g091285 | 52.110 | 474 | 161 | 12 | 413 | 863 | 159 | 589 | 1.19e-115 | 365 |
| MS.gene31397.t1 | MTR_2g091285 | 39.326 | 267 | 130 | 8 | 232 | 474 | 153 | 411 | 2.36e-22 | 102 |
| MS.gene31397.t1 | MTR_2g091315 | 46.745 | 599 | 193 | 14 | 6 | 521 | 4 | 559 | 4.22e-116 | 366 |
| MS.gene31397.t1 | MTR_2g091315 | 41.053 | 285 | 127 | 4 | 426 | 673 | 281 | 561 | 2.03e-30 | 127 |
| MS.gene31397.t1 | MTR_2g091315 | 36.141 | 368 | 178 | 9 | 372 | 698 | 193 | 544 | 1.47e-28 | 122 |
| MS.gene31397.t1 | MTR_2g091315 | 42.697 | 178 | 92 | 2 | 525 | 702 | 278 | 445 | 2.25e-14 | 77.4 |
| MS.gene31397.t1 | MTR_2g091030 | 55.000 | 460 | 159 | 10 | 413 | 863 | 168 | 588 | 1.42e-115 | 365 |
| MS.gene31397.t1 | MTR_2g091030 | 55.882 | 408 | 136 | 7 | 6 | 378 | 4 | 402 | 3.20e-102 | 330 |
| MS.gene31397.t1 | MTR_2g010420 | 45.693 | 534 | 246 | 9 | 373 | 882 | 243 | 756 | 1.30e-112 | 365 |
| MS.gene31397.t1 | MTR_2g010420 | 34.811 | 609 | 309 | 12 | 23 | 604 | 27 | 574 | 2.60e-61 | 224 |
| MS.gene31397.t1 | MTR_2g010420 | 39.130 | 276 | 144 | 3 | 448 | 702 | 236 | 508 | 5.56e-33 | 137 |
| MS.gene31397.t1 | MTR_6g045183 | 50.939 | 479 | 207 | 7 | 422 | 876 | 203 | 677 | 3.82e-110 | 356 |
| MS.gene31397.t1 | MTR_6g045183 | 37.649 | 502 | 223 | 13 | 1 | 431 | 1 | 483 | 2.18e-59 | 217 |
| MS.gene31397.t1 | MTR_2g091290 | 40.981 | 632 | 321 | 15 | 281 | 881 | 142 | 752 | 1.73e-108 | 353 |
| MS.gene31397.t1 | MTR_2g091290 | 40.370 | 540 | 253 | 9 | 54 | 548 | 53 | 568 | 1.52e-77 | 269 |
| MS.gene31397.t1 | MTR_2g091290 | 30.345 | 580 | 320 | 13 | 96 | 635 | 23 | 558 | 3.50e-31 | 132 |
| MS.gene31397.t1 | MTR_2g010420 | 46.214 | 515 | 233 | 9 | 373 | 863 | 243 | 737 | 1.21e-107 | 349 |
| MS.gene31397.t1 | MTR_2g010420 | 34.811 | 609 | 309 | 12 | 23 | 604 | 27 | 574 | 1.08e-61 | 223 |
| MS.gene31397.t1 | MTR_2g010420 | 39.130 | 276 | 144 | 3 | 448 | 702 | 236 | 508 | 6.47e-33 | 137 |
| MS.gene31397.t1 | MTR_2g091105 | 57.107 | 394 | 130 | 9 | 497 | 876 | 229 | 597 | 3.46e-102 | 333 |
| MS.gene31397.t1 | MTR_2g091105 | 44.820 | 444 | 179 | 11 | 6 | 419 | 4 | 411 | 1.93e-78 | 269 |
| MS.gene31397.t1 | MTR_2g091105 | 34.191 | 272 | 168 | 4 | 314 | 582 | 146 | 409 | 7.71e-19 | 92.0 |
| MS.gene31397.t1 | MTR_2g091240 | 54.839 | 403 | 145 | 7 | 494 | 882 | 127 | 506 | 1.47e-101 | 328 |
| MS.gene31397.t1 | MTR_2g091240 | 35.075 | 268 | 140 | 4 | 146 | 409 | 73 | 310 | 1.68e-23 | 106 |
| MS.gene31397.t1 | MTR_2g091240 | 32.410 | 361 | 166 | 9 | 54 | 413 | 44 | 327 | 2.36e-21 | 99.8 |
| MS.gene31397.t1 | MTR_2g091240 | 38.996 | 259 | 103 | 7 | 207 | 447 | 78 | 299 | 3.20e-19 | 93.2 |
| MS.gene31397.t1 | MTR_2g091240 | 39.189 | 222 | 73 | 7 | 318 | 532 | 144 | 310 | 1.67e-13 | 74.7 |
| MS.gene31397.t1 | MTR_2g091240 | 33.161 | 193 | 85 | 2 | 393 | 573 | 149 | 309 | 5.56e-12 | 70.1 |
| MS.gene31397.t1 | MTR_2g091370 | 45.796 | 452 | 169 | 8 | 490 | 875 | 307 | 748 | 2.91e-95 | 318 |
| MS.gene31397.t1 | MTR_2g091370 | 37.607 | 585 | 262 | 10 | 8 | 507 | 6 | 572 | 1.37e-70 | 250 |
| MS.gene31397.t1 | MTR_2g091245 | 52.068 | 411 | 135 | 8 | 485 | 881 | 214 | 576 | 7.38e-95 | 312 |
| MS.gene31397.t1 | MTR_2g091245 | 36.910 | 466 | 252 | 8 | 34 | 485 | 4 | 441 | 4.88e-55 | 202 |
| MS.gene31397.t1 | MTR_2g091025 | 48.020 | 404 | 180 | 6 | 495 | 875 | 131 | 527 | 1.19e-93 | 306 |
| MS.gene31397.t1 | MTR_2g091025 | 40.092 | 217 | 110 | 3 | 228 | 442 | 126 | 324 | 1.53e-26 | 115 |
| MS.gene31397.t1 | MTR_2g091025 | 40.206 | 194 | 103 | 2 | 222 | 413 | 150 | 332 | 9.52e-22 | 100 |
| MS.gene31397.t1 | MTR_5g038810 | 48.804 | 418 | 167 | 10 | 484 | 885 | 120 | 506 | 5.25e-91 | 302 |
| MS.gene31397.t1 | MTR_5g038810 | 50.313 | 320 | 130 | 3 | 54 | 363 | 21 | 321 | 2.48e-71 | 249 |
| MS.gene31397.t1 | MTR_5g038810 | 55.414 | 157 | 66 | 1 | 424 | 580 | 165 | 317 | 2.05e-36 | 147 |
| MS.gene31397.t1 | MTR_5g038810 | 35.918 | 245 | 89 | 7 | 270 | 475 | 109 | 324 | 2.12e-18 | 90.5 |
| MS.gene31397.t1 | MTR_2g091010 | 39.213 | 635 | 231 | 17 | 4 | 532 | 2 | 587 | 1.71e-84 | 286 |
| MS.gene31397.t1 | MTR_2g091010 | 35.856 | 555 | 246 | 14 | 232 | 755 | 165 | 640 | 5.05e-54 | 201 |
| MS.gene31397.t1 | MTR_2g090980 | 57.143 | 259 | 99 | 3 | 627 | 883 | 288 | 536 | 1.80e-78 | 265 |
| MS.gene31397.t1 | MTR_2g091330 | 39.369 | 602 | 248 | 14 | 6 | 504 | 4 | 591 | 2.06e-77 | 264 |
| MS.gene31397.t1 | MTR_2g091330 | 41.237 | 388 | 178 | 7 | 343 | 696 | 220 | 591 | 6.22e-52 | 192 |
| MS.gene31397.t1 | MTR_2g091330 | 44.601 | 213 | 108 | 1 | 490 | 702 | 262 | 464 | 1.39e-27 | 119 |
| MS.gene31397.t1 | MTR_2g091090 | 38.842 | 587 | 273 | 14 | 342 | 881 | 21 | 568 | 8.34e-77 | 263 |
| MS.gene31397.t1 | MTR_2g091090 | 40.976 | 410 | 185 | 11 | 1 | 399 | 1 | 364 | 5.19e-51 | 191 |
| MS.gene31397.t1 | MTR_2g103620 | 48.343 | 362 | 106 | 10 | 508 | 863 | 92 | 378 | 5.20e-72 | 242 |
| MS.gene31397.t1 | MTR_2g103620 | 36.364 | 286 | 97 | 7 | 54 | 324 | 8 | 223 | 6.89e-21 | 96.3 |
| MS.gene31397.t1 | MTR_2g103640 | 48.696 | 345 | 116 | 10 | 496 | 836 | 66 | 353 | 5.18e-66 | 225 |
| MS.gene31397.t1 | MTR_2g103640 | 34.884 | 301 | 132 | 7 | 58 | 357 | 2 | 239 | 1.74e-23 | 103 |
| MS.gene31397.t1 | MTR_2g104190 | 46.322 | 367 | 145 | 9 | 508 | 872 | 296 | 612 | 2.02e-65 | 231 |
| MS.gene31397.t1 | MTR_2g104190 | 39.506 | 405 | 170 | 9 | 23 | 389 | 82 | 449 | 3.76e-50 | 188 |
| MS.gene31397.t1 | MTR_2g091005 | 38.760 | 516 | 255 | 12 | 8 | 478 | 6 | 505 | 3.71e-64 | 227 |
| MS.gene31397.t1 | MTR_2g091005 | 34.058 | 414 | 224 | 11 | 314 | 704 | 138 | 525 | 1.71e-28 | 122 |
| MS.gene31397.t1 | MTR_2g090640 | 46.814 | 361 | 129 | 7 | 171 | 495 | 100 | 433 | 1.57e-58 | 210 |
| MS.gene31397.t1 | MTR_2g090640 | 40.056 | 357 | 155 | 6 | 369 | 683 | 106 | 445 | 1.36e-42 | 164 |
| MS.gene31397.t1 | MTR_2g090640 | 36.243 | 378 | 169 | 8 | 431 | 754 | 126 | 485 | 3.45e-35 | 142 |
| MS.gene31397.t1 | MTR_2g090640 | 34.564 | 298 | 123 | 8 | 118 | 414 | 207 | 433 | 5.54e-19 | 92.0 |
| MS.gene31397.t1 | MTR_2g090640 | 33.542 | 319 | 149 | 8 | 125 | 397 | 147 | 448 | 3.57e-17 | 86.3 |
| MS.gene31397.t1 | MTR_2g091040 | 40.976 | 410 | 185 | 11 | 1 | 399 | 1 | 364 | 8.44e-52 | 190 |
| MS.gene31397.t1 | MTR_2g091040 | 44.961 | 258 | 99 | 5 | 495 | 744 | 201 | 423 | 1.89e-34 | 139 |
| MS.gene31397.t1 | MTR_2g091040 | 36.598 | 194 | 119 | 1 | 448 | 637 | 188 | 381 | 1.72e-19 | 93.6 |
| MS.gene31397.t1 | MTR_7g056317 | 92.661 | 109 | 8 | 0 | 781 | 889 | 1 | 109 | 5.39e-48 | 166 |
| MS.gene31397.t1 | MTR_5g078500 | 38.968 | 349 | 157 | 12 | 2 | 339 | 1 | 304 | 3.63e-44 | 162 |
| MS.gene31397.t1 | MTR_5g078500 | 36.154 | 130 | 79 | 1 | 487 | 616 | 179 | 304 | 9.73e-11 | 64.3 |
| MS.gene31397.t1 | MTR_2g091070 | 61.006 | 159 | 52 | 3 | 727 | 875 | 2 | 160 | 7.73e-43 | 155 |
| MS.gene31397.t1 | MTR_4g046660 | 35.328 | 518 | 258 | 17 | 420 | 871 | 78 | 584 | 1.20e-35 | 145 |
| MS.gene31397.t1 | MTR_8g107320 | 45.813 | 203 | 75 | 6 | 649 | 850 | 36 | 204 | 6.36e-35 | 132 |
| MS.gene31397.t1 | MTR_2g091360 | 60.769 | 130 | 43 | 2 | 482 | 607 | 30 | 155 | 1.07e-32 | 130 |
| MS.gene31397.t1 | MTR_2g091360 | 56.296 | 135 | 59 | 0 | 197 | 331 | 22 | 156 | 1.62e-32 | 129 |
| MS.gene31397.t1 | MTR_2g091360 | 42.759 | 145 | 82 | 1 | 422 | 565 | 25 | 169 | 3.05e-19 | 90.5 |
| MS.gene31397.t1 | MTR_2g091360 | 42.553 | 141 | 72 | 3 | 514 | 650 | 21 | 156 | 2.07e-17 | 84.7 |
| MS.gene31397.t1 | MTR_2g091360 | 44.056 | 143 | 70 | 2 | 298 | 430 | 35 | 177 | 1.75e-15 | 79.0 |
| MS.gene31397.t1 | MTR_2g091360 | 38.158 | 152 | 86 | 3 | 372 | 523 | 26 | 169 | 9.20e-13 | 70.9 |
| MS.gene31397.t1 | MTR_8g467200 | 39.322 | 295 | 148 | 11 | 592 | 871 | 32 | 310 | 1.13e-31 | 130 |
| MS.gene31397.t1 | MTR_4g084920 | 36.396 | 283 | 160 | 8 | 535 | 802 | 17 | 294 | 4.73e-27 | 113 |
| MS.gene31397.t1 | MTR_4g084920 | 30.942 | 223 | 117 | 7 | 116 | 305 | 3 | 221 | 1.93e-14 | 75.9 |
| MS.gene31397.t1 | MTR_8g106540 | 28.617 | 311 | 168 | 9 | 555 | 863 | 26 | 284 | 4.45e-22 | 98.2 |
| MS.gene31397.t1 | MTR_8g106540 | 43.689 | 103 | 47 | 2 | 502 | 604 | 29 | 120 | 6.87e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31397.t1 | AT5G27220 | 28.112 | 747 | 438 | 30 | 182 | 860 | 85 | 800 | 4.08e-16 | 84.0 |
| MS.gene31397.t1 | AT5G27220 | 28.112 | 747 | 438 | 30 | 182 | 860 | 85 | 800 | 4.08e-16 | 84.0 |
| MS.gene31397.t1 | AT5G27220 | 28.112 | 747 | 438 | 30 | 182 | 860 | 85 | 800 | 5.61e-16 | 83.6 |
| MS.gene31397.t1 | AT5G27220 | 28.112 | 747 | 438 | 30 | 182 | 860 | 85 | 800 | 5.61e-16 | 83.6 |
Find 165 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCTCAATATCTTTCTTTA+TGG | 0.078584 | 2.4:+9410533 | None:intergenic |
| TCGTTACACCGTGGAATAAT+TGG | 0.186276 | 2.4:+9408201 | None:intergenic |
| AAAATAAGAGAAAGGAAATT+AGG | 0.204823 | 2.4:-9410494 | MS.gene31397:CDS |
| TCGACTCAAGCTCCTTAATA+TGG | 0.246214 | 2.4:+9410220 | None:intergenic |
| AGATCCAGCAAAAGTTGTTT+TGG | 0.284507 | 2.4:-9408238 | MS.gene31397:CDS |
| GCATTTCGAAAGCCATATTA+AGG | 0.298255 | 2.4:-9410232 | MS.gene31397:CDS |
| ATTCAGTTGCTTCTCTTTAG+AGG | 0.311695 | 2.4:+9410035 | None:intergenic |
| TTGATTTAAACCCCTTCATT+TGG | 0.326386 | 2.4:+9409800 | None:intergenic |
| TCAATACCATTTCCTTCAAT+TGG | 0.340155 | 2.4:+9409758 | None:intergenic |
| GGAAGGGCAGCTCGGTTTGA+TGG | 0.363511 | 2.4:-9410394 | MS.gene31397:CDS |
| CATTTCAAAACAAAAGGAAT+TGG | 0.366413 | 2.4:-9410301 | MS.gene31397:CDS |
| TTTCGATGAAGATGAAATCT+TGG | 0.373847 | 2.4:-9407977 | MS.gene31397:CDS |
| AATTTGTTGAGGATCTTATC+AGG | 0.375922 | 2.4:-9406818 | MS.gene31397:CDS |
| CAATTAAGTCCAACCATTGA+TGG | 0.384832 | 2.4:-9408324 | MS.gene31397:CDS |
| TCAAAGCTGGATAAATTTGA+TGG | 0.394327 | 2.4:-9408920 | MS.gene31397:CDS |
| AAATAAGAGAAAGGAAATTA+GGG | 0.395303 | 2.4:-9410493 | MS.gene31397:CDS |
| CTTACACCAGGTTTAATCTT+CGG | 0.400167 | 2.4:+9408114 | None:intergenic |
| GAAAATTCTCTGGTGGTTCT+CGG | 0.400209 | 2.4:-9408039 | MS.gene31397:CDS |
| TTGACTCAAGCTCCTTGATT+CGG | 0.400367 | 2.4:+9409968 | None:intergenic |
| AGAAAGGAAATTAGGGATGT+TGG | 0.404853 | 2.4:-9410486 | MS.gene31397:CDS |
| CTGATTCATGCTCCTTCAAT+CGG | 0.411065 | 2.4:+9410178 | None:intergenic |
| TGAAGGCCAATTGAAGGAAA+TGG | 0.415380 | 2.4:-9409764 | MS.gene31397:CDS |
| TCCTTAACTTGTCCTTTCAA+TGG | 0.416406 | 2.4:+9410063 | None:intergenic |
| CAACTACACTGCCAGTTAAG+AGG | 0.420637 | 2.4:-9410770 | MS.gene31397:CDS |
| CGTTACACCGTGGAATAATT+GGG | 0.423380 | 2.4:+9408202 | None:intergenic |
| CTGCAAACTTGTTCCATCAA+TGG | 0.424369 | 2.4:+9408311 | None:intergenic |
| TCATCGAATACCCTCTTAAC+TGG | 0.425935 | 2.4:+9410759 | None:intergenic |
| GGTTTGATGGAGGACTTGAT+TGG | 0.427923 | 2.4:-9410381 | MS.gene31397:CDS |
| TAGATTGCTGCTCCATCACT+TGG | 0.430217 | 2.4:+9409884 | None:intergenic |
| TGTGGAACTGTTTCAGACCC+TGG | 0.436519 | 2.4:-9407920 | MS.gene31397:CDS |
| GTGGAACTGTTTCAGACCCT+GGG | 0.436738 | 2.4:-9407919 | MS.gene31397:CDS |
| TCTAAAGAGAAGCAACTTGA+TGG | 0.439668 | 2.4:-9409370 | MS.gene31397:CDS |
| TTGTATGAAGCTCGCTCGCT+TGG | 0.445057 | 2.4:+9409557 | None:intergenic |
| CATTCACCAGCTCCTTCACT+TGG | 0.445431 | 2.4:+9410274 | None:intergenic |
| TAAATTTGATGGACAATTGA+AGG | 0.446049 | 2.4:-9408909 | MS.gene31397:CDS |
| TTGATTCATGCTCCTTCACC+CGG | 0.446148 | 2.4:+9409926 | None:intergenic |
| GCCATTGAAAGGACAAGTTA+AGG | 0.449900 | 2.4:-9410064 | MS.gene31397:CDS |
| AATCCAAGTCAAGGCGTTAG+AGG | 0.450781 | 2.4:-9409845 | MS.gene31397:CDS |
| GGAATTCAAAGTACACTTGA+AGG | 0.453258 | 2.4:-9409191 | MS.gene31397:CDS |
| GCAACATGAGGGCCGGGTGA+TGG | 0.456158 | 2.4:-9409527 | MS.gene31397:CDS |
| TAGATTCCAGCTCCTTCACT+TGG | 0.457595 | 2.4:+9410010 | None:intergenic |
| TTTAAATGGCTAGCATCATT+CGG | 0.458824 | 2.4:-9410870 | MS.gene31397:CDS |
| TTGACTCAAGATCCATCATT+CGG | 0.459180 | 2.4:+9409716 | None:intergenic |
| TTGATTTAAGCTCCTCCACT+TGG | 0.460493 | 2.4:+9409431 | None:intergenic |
| AGAGAATAAGTTCAAAGTAC+TGG | 0.461562 | 2.4:-9408987 | MS.gene31397:CDS |
| AGAATTTGAAGGTAAAATGA+TGG | 0.461821 | 2.4:-9409485 | MS.gene31397:CDS |
| GGATAACATTTCAAAACAAA+AGG | 0.461832 | 2.4:-9410307 | MS.gene31397:CDS |
| TTGATTTGAAGTCCTCAACT+TGG | 0.471741 | 2.4:+9409095 | None:intergenic |
| CAAGGATCCTGGTTCAAAGC+TGG | 0.472459 | 2.4:-9408933 | MS.gene31397:CDS |
| TCATCGTCATAATCATCATA+TGG | 0.476502 | 2.4:+9410687 | None:intergenic |
| TTGCCTCTAACGCCTTGACT+TGG | 0.477996 | 2.4:+9409842 | None:intergenic |
| GAAGGAGCTGGTGAATGATT+TGG | 0.478296 | 2.4:-9410268 | MS.gene31397:CDS |
| TCATCACCAACACAAAACTT+TGG | 0.480289 | 2.4:+9410912 | None:intergenic |
| GGAATTTGAAGGCCAATTGA+AGG | 0.481369 | 2.4:-9409770 | MS.gene31397:CDS |
| GCAGCATGAAGGCCGGGTGA+AGG | 0.482203 | 2.4:-9409938 | MS.gene31397:CDS |
| CACAAGTTCTTCTTTGAGTG+TGG | 0.483252 | 2.4:+9410620 | None:intergenic |
| CAGATTCGAGCTCCTTCGCC+CGG | 0.486316 | 2.4:+9409305 | None:intergenic |
| CCTTCATTTGGTCTACAAGT+TGG | 0.492877 | 2.4:+9409812 | None:intergenic |
| AATTTGTTGTTCTTACTGCT+TGG | 0.496353 | 2.4:-9406788 | MS.gene31397:CDS |
| AGAATGACAGTTTCATCACT+TGG | 0.496443 | 2.4:+9408282 | None:intergenic |
| TTGATTTGTATTCCTCGACT+TGG | 0.497249 | 2.4:+9409053 | None:intergenic |
| GCAATATGAAGAACAAATGA+AGG | 0.497383 | 2.4:-9409233 | MS.gene31397:CDS |
| GCATTTCAAAAGCGAGGTGG+AGG | 0.500038 | 2.4:-9410106 | MS.gene31397:CDS |
| GGAAATGGTATTGAATCAAA+AGG | 0.501363 | 2.4:-9409749 | MS.gene31397:CDS |
| TTGAAAGAGAAGGAATTTGA+AGG | 0.502001 | 2.4:-9409676 | MS.gene31397:CDS |
| GTGTTTCGAGCTGCTTCTGT+CGG | 0.502608 | 2.4:+9409263 | None:intergenic |
| TTGATTCATGCTCCATCACC+CGG | 0.503709 | 2.4:+9409515 | None:intergenic |
| GCAGCTTGAAGGCCGATTGA+AGG | 0.506976 | 2.4:-9410190 | MS.gene31397:CDS |
| TGAAGGCCGACTGAAGGATC+TGG | 0.507816 | 2.4:-9409617 | MS.gene31397:CDS |
| TCGAAAGAGAGGCAGCTTGA+AGG | 0.508935 | 2.4:-9410201 | MS.gene31397:CDS |
| GTCCATAAAGAAAGATATTG+AGG | 0.511370 | 2.4:-9410535 | MS.gene31397:CDS |
| GATTAAACCTGGTGTAAGAA+AGG | 0.512752 | 2.4:-9408109 | MS.gene31397:CDS |
| TCAAAAGAGGATGAATTTGA+AGG | 0.513855 | 2.4:-9409328 | MS.gene31397:CDS |
| GGAGCATGAATTGAAAGAGA+AGG | 0.517745 | 2.4:-9409686 | MS.gene31397:CDS |
| GAAGGACAAATCAAGGATCC+TGG | 0.517942 | 2.4:-9408944 | MS.gene31397:CDS |
| GGGGTTTAAATCAAAAGAGA+TGG | 0.521802 | 2.4:-9409791 | MS.gene31397:CDS |
| GGAGACCATTCTGTAATTGA+TGG | 0.521988 | 2.4:-9408177 | MS.gene31397:CDS |
| AAGAGGATGAATTTGAAGGC+CGG | 0.522435 | 2.4:-9409324 | MS.gene31397:CDS |
| AAGAGAAGCAACATGAGGGC+CGG | 0.522529 | 2.4:-9409534 | MS.gene31397:CDS |
| CGAAGCTCGCAAGAAAATGC+AGG | 0.523237 | 2.4:-9410454 | MS.gene31397:CDS |
| GTTAAAAGAAGGACAAATCA+AGG | 0.525655 | 2.4:-9408951 | MS.gene31397:CDS |
| GGGATTTGAAGGCCGACTGA+AGG | 0.526976 | 2.4:-9409623 | MS.gene31397:CDS |
| AAAGAGCTCAAGTTAAAAGA+AGG | 0.528411 | 2.4:-9408962 | MS.gene31397:CDS |
| AGAACTAAAGACAAAAGAGT+TGG | 0.528840 | 2.4:-9410346 | MS.gene31397:CDS |
| AAGAGAAGCAGCATGAAGGC+CGG | 0.529945 | 2.4:-9409945 | MS.gene31397:CDS |
| TCAAAAGAGATGGAATTTGA+AGG | 0.530390 | 2.4:-9409781 | MS.gene31397:CDS |
| ACAAAATTGATGCCATTGAA+AGG | 0.531067 | 2.4:-9410075 | MS.gene31397:CDS |
| AGAGGATGAATTTGAAGGCC+GGG | 0.533463 | 2.4:-9409323 | MS.gene31397:CDS |
| CAGCAAGGTTTCATAAGAAG+AGG | 0.534182 | 2.4:-9410797 | MS.gene31397:CDS |
| AATGCTTCCTTTCTTACACC+AGG | 0.534337 | 2.4:+9408102 | None:intergenic |
| CCAACTTGTAGACCAAATGA+AGG | 0.538367 | 2.4:-9409812 | MS.gene31397:CDS |
| AAAGTTTATTTGCAAAACCC+AGG | 0.539415 | 2.4:+9407902 | None:intergenic |
| TCTAAAGAGAAGCAACTGAA+TGG | 0.542089 | 2.4:-9410033 | MS.gene31397:CDS |
| AGATCTTGAAAATAAGAGAA+AGG | 0.543045 | 2.4:-9410502 | MS.gene31397:CDS |
| AGAGAAGCAACATGAGGGCC+GGG | 0.544891 | 2.4:-9409533 | MS.gene31397:CDS |
| TCATAATCATCATATGGTGT+TGG | 0.544931 | 2.4:+9410693 | None:intergenic |
| TCAAAAGTGAGAGAATTTGA+AGG | 0.545064 | 2.4:-9409496 | MS.gene31397:CDS |
| GATGACAACAATTCCTTGTG+TGG | 0.545290 | 2.4:-9410741 | MS.gene31397:CDS |
| TGAATTTGAAGGCCGGGCGA+AGG | 0.546048 | 2.4:-9409317 | MS.gene31397:CDS |
| AGAATTTGAAAGCCAAGTGA+TGG | 0.547092 | 2.4:-9409896 | MS.gene31397:CDS |
| AGGAGCTTAAATCAAAAGAA+AGG | 0.552319 | 2.4:-9409423 | MS.gene31397:CDS |
| GAAGGAGTTAAAGTCAAAAG+AGG | 0.553476 | 2.4:-9409341 | MS.gene31397:CDS |
| GAATGGCCAAGTGAAGGAGC+TGG | 0.554411 | 2.4:-9410016 | MS.gene31397:CDS |
| AATTTATCCAGCTTTGAACC+AGG | 0.556077 | 2.4:+9408926 | None:intergenic |
| AGAGAAGCAGCATGAAGGCC+GGG | 0.557189 | 2.4:-9409944 | MS.gene31397:CDS |
| TTGAATGATGGACGTTGTTG+AGG | 0.562716 | 2.4:-9410946 | None:intergenic |
| ACAGTTTGAGAACCGAATCA+AGG | 0.562808 | 2.4:-9409980 | MS.gene31397:CDS |
| AACTACACTGCCAGTTAAGA+GGG | 0.568794 | 2.4:-9410769 | MS.gene31397:CDS |
| TCAAAAGAGAAGCAGCATGA+AGG | 0.569518 | 2.4:-9409949 | MS.gene31397:CDS |
| GCAACTTGATGGCCGACTGA+AGG | 0.570324 | 2.4:-9409359 | MS.gene31397:CDS |
| GGAGTTGCAGTCAAAAGAAG+AGG | 0.570613 | 2.4:-9409212 | MS.gene31397:CDS |
| GTTGGAACTTCGTCAAGTCA+TGG | 0.572370 | 2.4:-9410328 | MS.gene31397:CDS |
| GGAATTTGAAGGTCGAGTCA+AGG | 0.573311 | 2.4:-9409665 | MS.gene31397:CDS |
| AAACTTGTTCCATCAATGGT+TGG | 0.574021 | 2.4:+9408315 | None:intergenic |
| ACTCAAAGAAGAACTTGTGC+TGG | 0.576644 | 2.4:-9410616 | MS.gene31397:CDS |
| TTGACTTTAACTCCTTCAGT+CGG | 0.577388 | 2.4:+9409347 | None:intergenic |
| AGGAGCTTGAGTCGAAAGAG+AGG | 0.577870 | 2.4:-9410212 | MS.gene31397:CDS |
| ATGATGATGCTTTATCAGCA+AGG | 0.582356 | 2.4:-9410812 | MS.gene31397:CDS |
| AGCAAGGTTTCATAAGAAGA+GGG | 0.584239 | 2.4:-9410796 | MS.gene31397:CDS |
| GAATGACAGTTTCATCACTT+GGG | 0.585475 | 2.4:+9408283 | None:intergenic |
| TTTCTTCATCGAACCACACA+AGG | 0.589314 | 2.4:+9410728 | None:intergenic |
| GGAGTTCGAAGGTCAAGTTA+AGG | 0.589743 | 2.4:-9409149 | MS.gene31397:CDS |
| ATATGGTGTTGGAGACACCT+TGG | 0.590870 | 2.4:+9410704 | None:intergenic |
| GTACCTTACAGAATTTGTTG+AGG | 0.594741 | 2.4:-9406829 | MS.gene31397:intron |
| GCAACTGAATGGCCAAGTGA+AGG | 0.595311 | 2.4:-9410022 | MS.gene31397:CDS |
| GAAGCTCGCAAGAAAATGCA+GGG | 0.597595 | 2.4:-9410453 | MS.gene31397:CDS |
| TGCTACCATCAATTACAGAA+TGG | 0.597842 | 2.4:+9408172 | None:intergenic |
| AAGTTTATTTGCAAAACCCA+GGG | 0.598095 | 2.4:+9407903 | None:intergenic |
| TAGATACCAGCTCATTCACT+CGG | 0.603896 | 2.4:+9410136 | None:intergenic |
| GGAATTGGAAAGCCAAGTGA+AGG | 0.609390 | 2.4:-9410286 | MS.gene31397:CDS |
| CAACTTGTAGACCAAATGAA+GGG | 0.609683 | 2.4:-9409811 | MS.gene31397:CDS |
| GCAAGACACAAGTAGAAGAG+AGG | 0.609718 | 2.4:-9410566 | MS.gene31397:CDS |
| GGAAAGCCAAGTGAAGGAGC+TGG | 0.612850 | 2.4:-9410280 | MS.gene31397:CDS |
| AAATACTGAAAATTCTCTGG+TGG | 0.614556 | 2.4:-9408046 | MS.gene31397:CDS |
| GAAAATTGACGAATGTGTCA+AGG | 0.615476 | 2.4:-9410430 | MS.gene31397:CDS |
| GCTGTTTGAAATCCAAGTCA+AGG | 0.615868 | 2.4:-9409854 | MS.gene31397:CDS |
| TCAAAAGAAAGGCATACTCA+AGG | 0.616035 | 2.4:-9409412 | MS.gene31397:CDS |
| ATCTCACCGAAGATTAAACC+TGG | 0.617839 | 2.4:-9408120 | MS.gene31397:CDS |
| GGATCTTGAGTCAAAAGTGA+AGG | 0.619818 | 2.4:-9409707 | MS.gene31397:CDS |
| TATTCACCAGATCCTTCAGT+CGG | 0.619944 | 2.4:+9409611 | None:intergenic |
| AATTATTCCACGGTGTAACG+AGG | 0.622806 | 2.4:-9408199 | MS.gene31397:CDS |
| GCAACTTGAACGCCAAGTCG+AGG | 0.623834 | 2.4:-9409065 | MS.gene31397:CDS |
| AGAAGCAAATTGAAGAACGG+TGG | 0.627150 | 2.4:-9409027 | MS.gene31397:CDS |
| GCAGTTTGAAAGCCAAGTGG+AGG | 0.629827 | 2.4:-9409443 | MS.gene31397:CDS |
| GAAGGATCTGGTGAATAACC+TGG | 0.636279 | 2.4:-9409605 | MS.gene31397:CDS |
| TACAGAACCCAATTATTCCA+CGG | 0.636407 | 2.4:-9408209 | MS.gene31397:CDS |
| AAGAGAAGCAAATTGAAGAA+CGG | 0.637855 | 2.4:-9409030 | MS.gene31397:CDS |
| AACTTGTAGACCAAATGAAG+GGG | 0.638530 | 2.4:-9409810 | MS.gene31397:CDS |
| TGAAGGCCGAGTGAATGAGC+TGG | 0.640827 | 2.4:-9410142 | MS.gene31397:CDS |
| TACAAAAGAGAAGCAACATG+AGG | 0.643578 | 2.4:-9409539 | MS.gene31397:CDS |
| ACAAAAGAGAAGCAACATGA+GGG | 0.643671 | 2.4:-9409538 | MS.gene31397:CDS |
| AGGGCAGCTCGGTTTGATGG+AGG | 0.644192 | 2.4:-9410391 | MS.gene31397:CDS |
| TCAAAGGATGAGGAGTTCGA+AGG | 0.647608 | 2.4:-9409160 | MS.gene31397:CDS |
| ATGAGCTGGTATCTAAAGAG+AGG | 0.653525 | 2.4:-9410128 | MS.gene31397:CDS |
| GTAGCAAAGGAAGGGCAGCT+CGG | 0.654192 | 2.4:-9410402 | MS.gene31397:CDS |
| ATTATTCCACGGTGTAACGA+GGG | 0.659375 | 2.4:-9408198 | MS.gene31397:CDS |
| AGAGAGGCATTTCAAAAGCG+AGG | 0.662656 | 2.4:-9410112 | MS.gene31397:CDS |
| TGCTCAGCACAAGACAGCTG+TGG | 0.666122 | 2.4:-9407938 | MS.gene31397:CDS |
| ATATGCAGTTGCATCTAACA+CGG | 0.668146 | 2.4:-9408352 | MS.gene31397:intron |
| GAGGCATTTCAAAAGCGAGG+TGG | 0.670941 | 2.4:-9410109 | MS.gene31397:CDS |
| GCAATTCGAAAACCAAGTTG+AGG | 0.673687 | 2.4:-9409107 | MS.gene31397:CDS |
| GAAGCAGTTTGAAAGCCAAG+TGG | 0.692664 | 2.4:-9409446 | MS.gene31397:CDS |
| TGGTTCGATGAAGAAATCCA+AGG | 0.694789 | 2.4:-9410721 | MS.gene31397:CDS |
| AAGCTCGCAAGAAAATGCAG+GGG | 0.717186 | 2.4:-9410452 | MS.gene31397:CDS |
| TGGTCTCCCTCGTTACACCG+TGG | 0.726233 | 2.4:+9408192 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATATACTACATTTTTTT+TGG | + | chr2.4:9408992-9409011 | None:intergenic | 10.0% |
| !!! | TTTATAAATTCAAATACTTT+TGG | - | chr2.4:9410568-9410587 | MS.gene31397:CDS | 10.0% |
| !!! | AAGATCACTTAAATTTTAAA+TGG | - | chr2.4:9406816-9406835 | MS.gene31397:CDS | 15.0% |
| !!! | ATTAATAAACTATTTTGATG+AGG | - | chr2.4:9408845-9408864 | MS.gene31397:CDS | 15.0% |
| !!! | TTAAAACCATATTTCATTTT+TGG | - | chr2.4:9409910-9409929 | MS.gene31397:CDS | 15.0% |
| !! | AAAATAAGAGAAAGGAAATT+AGG | - | chr2.4:9407206-9407225 | MS.gene31397:intron | 20.0% |
| !! | AAATAAGAGAAAGGAAATTA+GGG | - | chr2.4:9407207-9407226 | MS.gene31397:intron | 20.0% |
| !! | AATCAATTTAACACTATCTT+TGG | - | chr2.4:9409177-9409196 | MS.gene31397:CDS | 20.0% |
| !! | TAACAAAAAACCAAGAAAAT+TGG | + | chr2.4:9410801-9410820 | None:intergenic | 20.0% |
| !! | TAAGATCCAAAAATGAAATA+TGG | + | chr2.4:9409919-9409938 | None:intergenic | 20.0% |
| !!! | AATAGGATTTTTTGAATGTA+TGG | + | chr2.4:9409268-9409287 | None:intergenic | 20.0% |
| !!! | ATTAGCTATATTTTCCAATT+TGG | + | chr2.4:9410352-9410371 | None:intergenic | 20.0% |
| ! | AAGAGATAACACTAACAATA+TGG | + | chr2.4:9410072-9410091 | None:intergenic | 25.0% |
| ! | AGAATTTGAAGGTAAAATGA+TGG | - | chr2.4:9408215-9408234 | MS.gene31397:CDS | 25.0% |
| ! | AGATCTTGAAAATAAGAGAA+AGG | - | chr2.4:9407198-9407217 | MS.gene31397:intron | 25.0% |
| ! | ATCCATAATATTACACTACA+TGG | + | chr2.4:9410288-9410307 | None:intergenic | 25.0% |
| ! | ATGATAAATAAAATCTGTGC+AGG | - | chr2.4:9410591-9410610 | MS.gene31397:CDS | 25.0% |
| ! | CAGATTGATATATTAGATGT+TGG | - | chr2.4:9410631-9410650 | MS.gene31397:CDS | 25.0% |
| ! | CATTTCAAAACAAAAGGAAT+TGG | - | chr2.4:9407399-9407418 | MS.gene31397:intron | 25.0% |
| ! | GAAAAATACTGAAAATTCTC+TGG | - | chr2.4:9409651-9409670 | MS.gene31397:CDS | 25.0% |
| ! | GAGTTTGAATCAAAAAAGAA+GGG | - | chr2.4:9408057-9408076 | MS.gene31397:CDS | 25.0% |
| ! | GGATAACATTTCAAAACAAA+AGG | - | chr2.4:9407393-9407412 | MS.gene31397:intron | 25.0% |
| ! | TATGGATAATGAATTCTAAG+TGG | - | chr2.4:9410301-9410320 | MS.gene31397:CDS | 25.0% |
| ! | TCAGAAGAAAAAGAATTTGA+AGG | - | chr2.4:9407541-9407560 | MS.gene31397:intron | 25.0% |
| ! | TTATACAAATGTTCTTGATG+AGG | - | chr2.4:9410131-9410150 | MS.gene31397:CDS | 25.0% |
| !! | ATTATTCAGTCCAATTTTCT+TGG | - | chr2.4:9410788-9410807 | MS.gene31397:CDS | 25.0% |
| !! | ATTTCATTTTCCAAGCATTA+GGG | + | chr2.4:9410704-9410723 | None:intergenic | 25.0% |
| !! | CAGTTTTTATATCACACATA+CGG | - | chr2.4:9409090-9409109 | MS.gene31397:CDS | 25.0% |
| !! | TAAATTTGATGGACAATTGA+AGG | - | chr2.4:9408791-9408810 | MS.gene31397:intron | 25.0% |
| !! | TATTTCATTTTCCAAGCATT+AGG | + | chr2.4:9410705-9410724 | None:intergenic | 25.0% |
| !! | TCACATCTGTTTTCTTAATT+TGG | - | chr2.4:9410203-9410222 | MS.gene31397:CDS | 25.0% |
| !! | TTTTGATGAGGAAAAAGAAT+CGG | - | chr2.4:9408857-9408876 | MS.gene31397:CDS | 25.0% |
| !! | TTTTTATAGTGTGTCTGTAT+GGG | + | chr2.4:9409020-9409039 | None:intergenic | 25.0% |
| !!! | CTCTTTTTGTTTCTATGTTT+TGG | - | chr2.4:9409867-9409886 | MS.gene31397:CDS | 25.0% |
| !!! | GGTATGTTTTAATCTAGATA+TGG | - | chr2.4:9409823-9409842 | MS.gene31397:CDS | 25.0% |
| !!! | GTTTTAATCTAGATATGGTT+TGG | - | chr2.4:9409828-9409847 | MS.gene31397:CDS | 25.0% |
| !!! | TATACTACATTTTTTTTGGC+AGG | + | chr2.4:9408988-9409007 | None:intergenic | 25.0% |
| !!! | TATATCCTATTTTGAGAATG+TGG | - | chr2.4:9410163-9410182 | MS.gene31397:CDS | 25.0% |
| !!! | TATATTAGATGTTGGTAACT+TGG | - | chr2.4:9410639-9410658 | MS.gene31397:CDS | 25.0% |
| !!! | TCATTTATTGTGTGTTGTTT+TGG | - | chr2.4:9409939-9409958 | MS.gene31397:CDS | 25.0% |
| !!! | TGTTTTCTTAATTTGGTATC+TGG | - | chr2.4:9410210-9410229 | MS.gene31397:CDS | 25.0% |
| !!! | TTTTTTATAGTGTGTCTGTA+TGG | + | chr2.4:9409021-9409040 | None:intergenic | 25.0% |
| AAAGAGCTCAAGTTAAAAGA+AGG | - | chr2.4:9408738-9408757 | MS.gene31397:intron | 30.0% | |
| AAAGTTTATTTGCAAAACCC+AGG | + | chr2.4:9409801-9409820 | None:intergenic | 30.0% | |
| AAATACTGAAAATTCTCTGG+TGG | - | chr2.4:9409654-9409673 | MS.gene31397:CDS | 30.0% | |
| AAGAAAACAGATGTGAAACA+CGG | + | chr2.4:9410199-9410218 | None:intergenic | 30.0% | |
| AAGAGAAGCAAATTGAAGAA+CGG | - | chr2.4:9408670-9408689 | MS.gene31397:intron | 30.0% | |
| AAGTTTATTTGCAAAACCCA+GGG | + | chr2.4:9409800-9409819 | None:intergenic | 30.0% | |
| ACAAAATTGATGCCATTGAA+AGG | - | chr2.4:9407625-9407644 | MS.gene31397:intron | 30.0% | |
| ACTAGAACTTATGTTTGTTC+TGG | - | chr2.4:9410821-9410840 | MS.gene31397:CDS | 30.0% | |
| AGAAACAAAAAGAGAGTTAC+CGG | + | chr2.4:9409861-9409880 | None:intergenic | 30.0% | |
| AGAACTAAAGACAAAAGAGT+TGG | - | chr2.4:9407354-9407373 | MS.gene31397:intron | 30.0% | |
| AGAGAATAAGTTCAAAGTAC+TGG | - | chr2.4:9408713-9408732 | MS.gene31397:intron | 30.0% | |
| AGGAGCTTAAATCAAAAGAA+AGG | - | chr2.4:9408277-9408296 | MS.gene31397:CDS | 30.0% | |
| AGTATGAGATAGTAAAGGAA+CGG | - | chr2.4:9410501-9410520 | MS.gene31397:CDS | 30.0% | |
| CCATCAAACCATTTATAACA+CGG | + | chr2.4:9410761-9410780 | None:intergenic | 30.0% | |
| CGTATGTGTGATATAAAAAC+TGG | + | chr2.4:9409092-9409111 | None:intergenic | 30.0% | |
| CTCCTCAATATCTTTCTTTA+TGG | + | chr2.4:9407170-9407189 | None:intergenic | 30.0% | |
| GCAATATGAAGAACAAATGA+AGG | - | chr2.4:9408467-9408486 | MS.gene31397:intron | 30.0% | |
| GGAGTTTGAATCAAAAAAGA+AGG | - | chr2.4:9408056-9408075 | MS.gene31397:CDS | 30.0% | |
| GTCCATAAAGAAAGATATTG+AGG | - | chr2.4:9407165-9407184 | MS.gene31397:intron | 30.0% | |
| GTCCATGTAGTGTAATATTA+TGG | - | chr2.4:9410283-9410302 | MS.gene31397:CDS | 30.0% | |
| GTTAAAAGAAGGACAAATCA+AGG | - | chr2.4:9408749-9408768 | MS.gene31397:intron | 30.0% | |
| GTTTGAGTATGAGATAGTAA+AGG | - | chr2.4:9410496-9410515 | MS.gene31397:CDS | 30.0% | |
| TCAAAAAAGAAGGGATTTGA+AGG | - | chr2.4:9408066-9408085 | MS.gene31397:CDS | 30.0% | |
| TCAAAAGAGATGGAATTTGA+AGG | - | chr2.4:9407919-9407938 | MS.gene31397:CDS | 30.0% | |
| TCAAAAGAGGATGAATTTGA+AGG | - | chr2.4:9408372-9408391 | MS.gene31397:intron | 30.0% | |
| TCAAAAGTGAGAGAATTTGA+AGG | - | chr2.4:9408204-9408223 | MS.gene31397:CDS | 30.0% | |
| TCAAAGCTGGATAAATTTGA+TGG | - | chr2.4:9408780-9408799 | MS.gene31397:intron | 30.0% | |
| TCAATACCATTTCCTTCAAT+TGG | + | chr2.4:9407945-9407964 | None:intergenic | 30.0% | |
| TCATAATCATCATATGGTGT+TGG | + | chr2.4:9407010-9407029 | None:intergenic | 30.0% | |
| TCATCGTCATAATCATCATA+TGG | + | chr2.4:9407016-9407035 | None:intergenic | 30.0% | |
| TCTCATACTCAAACAACTTT+AGG | + | chr2.4:9410490-9410509 | None:intergenic | 30.0% | |
| TTACATGTGTAACTCTTATG+AGG | - | chr2.4:9410026-9410045 | MS.gene31397:CDS | 30.0% | |
| TTGAAAGAGAAGGAATTTGA+AGG | - | chr2.4:9408024-9408043 | MS.gene31397:CDS | 30.0% | |
| TTGATTTAAACCCCTTCATT+TGG | + | chr2.4:9407903-9407922 | None:intergenic | 30.0% | |
| TTTAAATGGCTAGCATCATT+CGG | - | chr2.4:9406830-9406849 | MS.gene31397:intron | 30.0% | |
| TTTCGATGAAGATGAAATCT+TGG | - | chr2.4:9409723-9409742 | MS.gene31397:CDS | 30.0% | |
| TTTGATGAGGAAAAAGAATC+GGG | - | chr2.4:9408858-9408877 | MS.gene31397:CDS | 30.0% | |
| ! | ATATCCAAAACAACTTTTGC+TGG | + | chr2.4:9409469-9409488 | None:intergenic | 30.0% |
| ! | CTTGAAGGATTTTGAATCAA+AGG | - | chr2.4:9408524-9408543 | MS.gene31397:intron | 30.0% |
| ! | GAGTTGTCCTATTTCTTAAA+AGG | + | chr2.4:9410538-9410557 | None:intergenic | 30.0% |
| ! | GCTTTTGTCAGTTTATGAAT+TGG | - | chr2.4:9409693-9409712 | MS.gene31397:CDS | 30.0% |
| ! | GGAAATGGTATTGAATCAAA+AGG | - | chr2.4:9407951-9407970 | MS.gene31397:CDS | 30.0% |
| ! | GGTTTTGCAAATAAACTTTC+AGG | - | chr2.4:9409802-9409821 | MS.gene31397:CDS | 30.0% |
| ! | TCAATGGCATCAATTTTGTA+TGG | + | chr2.4:9407624-9407643 | None:intergenic | 30.0% |
| ! | TGTTGCTTCTAAAAGTATGA+GGG | - | chr2.4:9409303-9409322 | MS.gene31397:CDS | 30.0% |
| ! | TTTCATTTTCCAAGCATTAG+GGG | + | chr2.4:9410703-9410722 | None:intergenic | 30.0% |
| !! | AATGCTTTTGTTTAGATACC+AGG | + | chr2.4:9408116-9408135 | None:intergenic | 30.0% |
| !! | AATTTGTTGAGGATCTTATC+AGG | - | chr2.4:9410882-9410901 | MS.gene31397:CDS | 30.0% |
| !! | AATTTGTTGTTCTTACTGCT+TGG | - | chr2.4:9410912-9410931 | MS.gene31397:CDS | 30.0% |
| !! | ACTGAGTCCTTTTAAGAAAT+AGG | - | chr2.4:9410528-9410547 | MS.gene31397:CDS | 30.0% |
| !! | TAATTTGGTATCTGGTTCTT+TGG | - | chr2.4:9410218-9410237 | MS.gene31397:CDS | 30.0% |
| !! | TACATCGATTTGAACACAAA+TGG | - | chr2.4:9410324-9410343 | MS.gene31397:CDS | 30.0% |
| AACTTGTAGACCAAATGAAG+GGG | - | chr2.4:9407890-9407909 | MS.gene31397:intron | 35.0% | |
| ACAAAAGAGAAGCAACATGA+GGG | - | chr2.4:9408162-9408181 | MS.gene31397:CDS | 35.0% | |
| AGAAAGGAAATTAGGGATGT+TGG | - | chr2.4:9407214-9407233 | MS.gene31397:intron | 35.0% | |
| AGAATGACAGTTTCATCACT+TGG | + | chr2.4:9409421-9409440 | None:intergenic | 35.0% | |
| AGAATTTGAAAGCCAAGTGA+TGG | - | chr2.4:9407804-9407823 | MS.gene31397:intron | 35.0% | |
| AGAGTCCACATTCTCAAAAT+AGG | + | chr2.4:9410171-9410190 | None:intergenic | 35.0% | |
| AGCAAGGTTTCATAAGAAGA+GGG | - | chr2.4:9406904-9406923 | MS.gene31397:intron | 35.0% | |
| ATATGCAGTTGCATCTAACA+CGG | - | chr2.4:9409348-9409367 | MS.gene31397:CDS | 35.0% | |
| ATTCAGTTGCTTCTCTTTAG+AGG | + | chr2.4:9407668-9407687 | None:intergenic | 35.0% | |
| CAACTTGTAGACCAAATGAA+GGG | - | chr2.4:9407889-9407908 | MS.gene31397:intron | 35.0% | |
| CAATTAAGTCCAACCATTGA+TGG | - | chr2.4:9409376-9409395 | MS.gene31397:CDS | 35.0% | |
| CCGTGTTATAAATGGTTTGA+TGG | - | chr2.4:9410758-9410777 | MS.gene31397:CDS | 35.0% | |
| CTTACACCAGGTTTAATCTT+CGG | + | chr2.4:9409589-9409608 | None:intergenic | 35.0% | |
| GAAAATTGACGAATGTGTCA+AGG | - | chr2.4:9407270-9407289 | MS.gene31397:intron | 35.0% | |
| GAAGGAGTTAAAGTCAAAAG+AGG | - | chr2.4:9408359-9408378 | MS.gene31397:intron | 35.0% | |
| GAATGACAGTTTCATCACTT+GGG | + | chr2.4:9409420-9409439 | None:intergenic | 35.0% | |
| GACACACTGTCAAACTAATT+TGG | - | chr2.4:9409112-9409131 | MS.gene31397:CDS | 35.0% | |
| GATCCTCAACAAATTCTGTA+AGG | + | chr2.4:9410877-9410896 | None:intergenic | 35.0% | |
| GATTAAACCTGGTGTAAGAA+AGG | - | chr2.4:9409591-9409610 | MS.gene31397:CDS | 35.0% | |
| GCATTTCGAAAGCCATATTA+AGG | - | chr2.4:9407468-9407487 | MS.gene31397:intron | 35.0% | |
| GCTGGTAGAAAAATCATTTG+AGG | - | chr2.4:9407102-9407121 | MS.gene31397:intron | 35.0% | |
| GGAATTCAAAGTACACTTGA+AGG | - | chr2.4:9408509-9408528 | MS.gene31397:intron | 35.0% | |
| GGGGTTTAAATCAAAAGAGA+TGG | - | chr2.4:9407909-9407928 | MS.gene31397:CDS | 35.0% | |
| GTATGAGATAGTAAAGGAAC+GGG | - | chr2.4:9410502-9410521 | MS.gene31397:CDS | 35.0% | |
| GTGTAACTCTTATGAGGTTA+TGG | - | chr2.4:9410032-9410051 | MS.gene31397:CDS | 35.0% | |
| GTTAGATGCAACTGCATATT+TGG | + | chr2.4:9409347-9409366 | None:intergenic | 35.0% | |
| TACAAAAGAGAAGCAACATG+AGG | - | chr2.4:9408161-9408180 | MS.gene31397:CDS | 35.0% | |
| TACAGAACCCAATTATTCCA+CGG | - | chr2.4:9409491-9409510 | MS.gene31397:CDS | 35.0% | |
| TCATCACCAACACAAAACTT+TGG | + | chr2.4:9406791-9406810 | None:intergenic | 35.0% | |
| TCTAAAGAGAAGCAACTGAA+TGG | - | chr2.4:9407667-9407686 | MS.gene31397:intron | 35.0% | |
| TCTAAAGAGAAGCAACTTGA+TGG | - | chr2.4:9408330-9408349 | MS.gene31397:CDS | 35.0% | |
| TGCTACCATCAATTACAGAA+TGG | + | chr2.4:9409531-9409550 | None:intergenic | 35.0% | |
| TTGACTCAAGATCCATCATT+CGG | + | chr2.4:9407987-9408006 | None:intergenic | 35.0% | |
| TTGACTTTAACTCCTTCAGT+CGG | + | chr2.4:9408356-9408375 | None:intergenic | 35.0% | |
| ! | AAACTTGTTCCATCAATGGT+TGG | + | chr2.4:9409388-9409407 | None:intergenic | 35.0% |
| ! | AAGGATTTTGTAGCAAAGGA+AGG | - | chr2.4:9407289-9407308 | MS.gene31397:intron | 35.0% |
| ! | AGATCCAGCAAAAGTTGTTT+TGG | - | chr2.4:9409462-9409481 | MS.gene31397:CDS | 35.0% |
| ! | AGGATTTTGTAGCAAAGGAA+GGG | - | chr2.4:9407290-9407309 | MS.gene31397:intron | 35.0% |
| ! | ATGATGATGCTTTATCAGCA+AGG | - | chr2.4:9406888-9406907 | MS.gene31397:intron | 35.0% |
| ! | CTGTTGCTTCTAAAAGTATG+AGG | - | chr2.4:9409302-9409321 | MS.gene31397:CDS | 35.0% |
| ! | GGATTTTGAATCAAAGGATG+AGG | - | chr2.4:9408530-9408549 | MS.gene31397:intron | 35.0% |
| ! | TCAAAAGAAAGGCATACTCA+AGG | - | chr2.4:9408288-9408307 | MS.gene31397:CDS | 35.0% |
| ! | TGTCAAGGATTTTGTAGCAA+AGG | - | chr2.4:9407285-9407304 | MS.gene31397:intron | 35.0% |
| ! | TTGATTTGAAGTCCTCAACT+TGG | + | chr2.4:9408608-9408627 | None:intergenic | 35.0% |
| !! | AATTTATCCAGCTTTGAACC+AGG | + | chr2.4:9408777-9408796 | None:intergenic | 35.0% |
| !! | ATTTTGTTTCCCCTAATGCT+TGG | - | chr2.4:9410691-9410710 | MS.gene31397:CDS | 35.0% |
| !! | GATAAGCCAAAGTTTTGTGT+TGG | - | chr2.4:9406782-9406801 | MS.gene31397:CDS | 35.0% |
| !! | GTACCTTACAGAATTTGTTG+AGG | - | chr2.4:9410871-9410890 | MS.gene31397:CDS | 35.0% |
| !! | TCCTTAACTTGTCCTTTCAA+TGG | + | chr2.4:9407640-9407659 | None:intergenic | 35.0% |
| !! | TTGATTTGTATTCCTCGACT+TGG | + | chr2.4:9408650-9408669 | None:intergenic | 35.0% |
| AACTACACTGCCAGTTAAGA+GGG | - | chr2.4:9406931-9406950 | MS.gene31397:intron | 40.0% | |
| AAGAGGATGAATTTGAAGGC+CGG | - | chr2.4:9408376-9408395 | MS.gene31397:intron | 40.0% | |
| AATGCTTCCTTTCTTACACC+AGG | + | chr2.4:9409601-9409620 | None:intergenic | 40.0% | |
| AATTATTCCACGGTGTAACG+AGG | - | chr2.4:9409501-9409520 | MS.gene31397:CDS | 40.0% | |
| ACAGTTTGAGAACCGAATCA+AGG | - | chr2.4:9407720-9407739 | MS.gene31397:intron | 40.0% | |
| ACTCAAAGAAGAACTTGTGC+TGG | - | chr2.4:9407084-9407103 | MS.gene31397:intron | 40.0% | |
| AGAAGCAAATTGAAGAACGG+TGG | - | chr2.4:9408673-9408692 | MS.gene31397:intron | 40.0% | |
| ATCTCACCGAAGATTAAACC+TGG | - | chr2.4:9409580-9409599 | MS.gene31397:CDS | 40.0% | |
| ATCTGCTATCAGACAGAATG+AGG | - | chr2.4:9410439-9410458 | MS.gene31397:CDS | 40.0% | |
| ATGAGCTGGTATCTAAAGAG+AGG | - | chr2.4:9407572-9407591 | MS.gene31397:intron | 40.0% | |
| ATTATTCCACGGTGTAACGA+GGG | - | chr2.4:9409502-9409521 | MS.gene31397:CDS | 40.0% | |
| CACAAGTTCTTCTTTGAGTG+TGG | + | chr2.4:9407083-9407102 | None:intergenic | 40.0% | |
| CAGCAAATGCAGATGACAAT+AGG | + | chr2.4:9409285-9409304 | None:intergenic | 40.0% | |
| CAGCAAGGTTTCATAAGAAG+AGG | - | chr2.4:9406903-9406922 | MS.gene31397:intron | 40.0% | |
| CCAACTTGTAGACCAAATGA+AGG | - | chr2.4:9407888-9407907 | MS.gene31397:intron | 40.0% | |
| CCTTCATTTGGTCTACAAGT+TGG | + | chr2.4:9407891-9407910 | None:intergenic | 40.0% | |
| CGTTACACCGTGGAATAATT+GGG | + | chr2.4:9409501-9409520 | None:intergenic | 40.0% | |
| CTGATTCATGCTCCTTCAAT+CGG | + | chr2.4:9407525-9407544 | None:intergenic | 40.0% | |
| GAAAATTCTCTGGTGGTTCT+CGG | - | chr2.4:9409661-9409680 | MS.gene31397:CDS | 40.0% | |
| GAACACAAATGGAGCCAAAT+TGG | - | chr2.4:9410335-9410354 | MS.gene31397:CDS | 40.0% | |
| GAGCAATGAGACATACTCAA+CGG | + | chr2.4:9410256-9410275 | None:intergenic | 40.0% | |
| GATGACAACAATTCCTTGTG+TGG | - | chr2.4:9406959-9406978 | MS.gene31397:intron | 40.0% | |
| GCAATTCGAAAACCAAGTTG+AGG | - | chr2.4:9408593-9408612 | MS.gene31397:intron | 40.0% | |
| GCCATTGAAAGGACAAGTTA+AGG | - | chr2.4:9407636-9407655 | MS.gene31397:intron | 40.0% | |
| GGAATTTGAAGGCCAATTGA+AGG | - | chr2.4:9407930-9407949 | MS.gene31397:CDS | 40.0% | |
| GGAGACCATTCTGTAATTGA+TGG | - | chr2.4:9409523-9409542 | MS.gene31397:CDS | 40.0% | |
| GGAGCATGAATTGAAAGAGA+AGG | - | chr2.4:9408014-9408033 | MS.gene31397:CDS | 40.0% | |
| GGATCTTGAGTCAAAAGTGA+AGG | - | chr2.4:9407993-9408012 | MS.gene31397:CDS | 40.0% | |
| TAGATACCAGCTCATTCACT+CGG | + | chr2.4:9407567-9407586 | None:intergenic | 40.0% | |
| TATTCACCAGATCCTTCAGT+CGG | + | chr2.4:9408092-9408111 | None:intergenic | 40.0% | |
| TCAAAAGAGAAGCAGCATGA+AGG | - | chr2.4:9407751-9407770 | MS.gene31397:intron | 40.0% | |
| TCATCGAATACCCTCTTAAC+TGG | + | chr2.4:9406944-9406963 | None:intergenic | 40.0% | |
| TCGACTCAAGCTCCTTAATA+TGG | + | chr2.4:9407483-9407502 | None:intergenic | 40.0% | |
| TCGTTACACCGTGGAATAAT+TGG | + | chr2.4:9409502-9409521 | None:intergenic | 40.0% | |
| TGAAGGCCAATTGAAGGAAA+TGG | - | chr2.4:9407936-9407955 | MS.gene31397:CDS | 40.0% | |
| TGGTTCGATGAAGAAATCCA+AGG | - | chr2.4:9406979-9406998 | MS.gene31397:intron | 40.0% | |
| TTGACTCAAGCTCCTTGATT+CGG | + | chr2.4:9407735-9407754 | None:intergenic | 40.0% | |
| TTGATTTAAGCTCCTCCACT+TGG | + | chr2.4:9408272-9408291 | None:intergenic | 40.0% | |
| TTTCTTCATCGAACCACACA+AGG | + | chr2.4:9406975-9406994 | None:intergenic | 40.0% | |
| ! | CTGCAAACTTGTTCCATCAA+TGG | + | chr2.4:9409392-9409411 | None:intergenic | 40.0% |
| ! | GCTGTTTGAAATCCAAGTCA+AGG | - | chr2.4:9407846-9407865 | MS.gene31397:intron | 40.0% |
| !! | GGATTTTGATAGCCGAATGA+TGG | - | chr2.4:9407972-9407991 | MS.gene31397:CDS | 40.0% |
| !! | GTTGGTAACTTGGTACGAAA+CGG | - | chr2.4:9410649-9410668 | MS.gene31397:CDS | 40.0% |
| !! | TCTGGTTCTTTGGATGAACA+TGG | - | chr2.4:9410228-9410247 | MS.gene31397:CDS | 40.0% |
| AAGCTCGCAAGAAAATGCAG+GGG | - | chr2.4:9407248-9407267 | MS.gene31397:intron | 45.0% | |
| AGAGGATGAATTTGAAGGCC+GGG | - | chr2.4:9408377-9408396 | MS.gene31397:intron | 45.0% | |
| CAACTACACTGCCAGTTAAG+AGG | - | chr2.4:9406930-9406949 | MS.gene31397:intron | 45.0% | |
| CAGACAGAATGAGGTGGTTA+TGG | - | chr2.4:9410448-9410467 | MS.gene31397:CDS | 45.0% | |
| GAAGCAGTTTGAAAGCCAAG+TGG | - | chr2.4:9408254-9408273 | MS.gene31397:CDS | 45.0% | |
| GAAGCTCGCAAGAAAATGCA+GGG | - | chr2.4:9407247-9407266 | MS.gene31397:intron | 45.0% | |
| GAAGGACAAATCAAGGATCC+TGG | - | chr2.4:9408756-9408775 | MS.gene31397:intron | 45.0% | |
| GAAGGAGCTGGTGAATGATT+TGG | - | chr2.4:9407432-9407451 | MS.gene31397:intron | 45.0% | |
| GAAGGATCTGGTGAATAACC+TGG | - | chr2.4:9408095-9408114 | MS.gene31397:CDS | 45.0% | |
| GCAAGACACAAGTAGAAGAG+AGG | - | chr2.4:9407134-9407153 | MS.gene31397:intron | 45.0% | |
| GGAATTGGAAAGCCAAGTGA+AGG | - | chr2.4:9407414-9407433 | MS.gene31397:intron | 45.0% | |
| GGAATTTGAAGGTCGAGTCA+AGG | - | chr2.4:9408035-9408054 | MS.gene31397:CDS | 45.0% | |
| GGAGTTCGAAGGTCAAGTTA+AGG | - | chr2.4:9408551-9408570 | MS.gene31397:intron | 45.0% | |
| GGAGTTGCAGTCAAAAGAAG+AGG | - | chr2.4:9408488-9408507 | MS.gene31397:intron | 45.0% | |
| GGTTTGATGGAGGACTTGAT+TGG | - | chr2.4:9407319-9407338 | MS.gene31397:intron | 45.0% | |
| GTTGGAACTTCGTCAAGTCA+TGG | - | chr2.4:9407372-9407391 | MS.gene31397:intron | 45.0% | |
| TAGATTCCAGCTCCTTCACT+TGG | + | chr2.4:9407693-9407712 | None:intergenic | 45.0% | |
| TAGATTGCTGCTCCATCACT+TGG | + | chr2.4:9407819-9407838 | None:intergenic | 45.0% | |
| TCAAAGGATGAGGAGTTCGA+AGG | - | chr2.4:9408540-9408559 | MS.gene31397:intron | 45.0% | |
| TGAGTATGTCTCATTGCTCC+TGG | - | chr2.4:9410257-9410276 | MS.gene31397:CDS | 45.0% | |
| TGCTATCAGACAGAATGAGG+TGG | - | chr2.4:9410442-9410461 | MS.gene31397:CDS | 45.0% | |
| TTACACTACATGGACGTTCC+AGG | + | chr2.4:9410278-9410297 | None:intergenic | 45.0% | |
| TTGATTCATGCTCCATCACC+CGG | + | chr2.4:9408188-9408207 | None:intergenic | 45.0% | |
| TTGATTCATGCTCCTTCACC+CGG | + | chr2.4:9407777-9407796 | None:intergenic | 45.0% | |
| ! | AATCCAAGTCAAGGCGTTAG+AGG | - | chr2.4:9407855-9407874 | MS.gene31397:intron | 45.0% |
| ! | ATATGGTGTTGGAGACACCT+TGG | + | chr2.4:9406999-9407018 | None:intergenic | 45.0% |
| !! | AGAGAGGCATTTCAAAAGCG+AGG | - | chr2.4:9407588-9407607 | MS.gene31397:intron | 45.0% |
| !! | GATATGGTTTGGTCAGTCAC+CGG | - | chr2.4:9409839-9409858 | MS.gene31397:CDS | 45.0% |
| AAGAGAAGCAACATGAGGGC+CGG | - | chr2.4:9408166-9408185 | MS.gene31397:CDS | 50.0% | |
| AAGAGAAGCAGCATGAAGGC+CGG | - | chr2.4:9407755-9407774 | MS.gene31397:intron | 50.0% | |
| AGGAGCTTGAGTCGAAAGAG+AGG | - | chr2.4:9407488-9407507 | MS.gene31397:intron | 50.0% | |
| CAAGGATCCTGGTTCAAAGC+TGG | - | chr2.4:9408767-9408786 | MS.gene31397:intron | 50.0% | |
| CATTCACCAGCTCCTTCACT+TGG | + | chr2.4:9407429-9407448 | None:intergenic | 50.0% | |
| CGAAACGGAACTCGTGTAGT+TGG | - | chr2.4:9410664-9410683 | MS.gene31397:CDS | 50.0% | |
| CGAAGCTCGCAAGAAAATGC+AGG | - | chr2.4:9407246-9407265 | MS.gene31397:intron | 50.0% | |
| GCAACTGAATGGCCAAGTGA+AGG | - | chr2.4:9407678-9407697 | MS.gene31397:intron | 50.0% | |
| GCAGTTTGAAAGCCAAGTGG+AGG | - | chr2.4:9408257-9408276 | MS.gene31397:CDS | 50.0% | |
| GCATTTCAAAAGCGAGGTGG+AGG | - | chr2.4:9407594-9407613 | MS.gene31397:intron | 50.0% | |
| GTGGAACTGTTTCAGACCCT+GGG | - | chr2.4:9409781-9409800 | MS.gene31397:CDS | 50.0% | |
| GTGTTTCGAGCTGCTTCTGT+CGG | + | chr2.4:9408440-9408459 | None:intergenic | 50.0% | |
| TCGAAAGAGAGGCAGCTTGA+AGG | - | chr2.4:9407499-9407518 | MS.gene31397:intron | 50.0% | |
| TGTGGAACTGTTTCAGACCC+TGG | - | chr2.4:9409780-9409799 | MS.gene31397:CDS | 50.0% | |
| TTGCCTCTAACGCCTTGACT+TGG | + | chr2.4:9407861-9407880 | None:intergenic | 50.0% | |
| TTGTATGAAGCTCGCTCGCT+TGG | + | chr2.4:9408146-9408165 | None:intergenic | 50.0% | |
| ! | GAGGCATTTCAAAAGCGAGG+TGG | - | chr2.4:9407591-9407610 | MS.gene31397:intron | 50.0% |
| AGAGAAGCAACATGAGGGCC+GGG | - | chr2.4:9408167-9408186 | MS.gene31397:CDS | 55.0% | |
| AGAGAAGCAGCATGAAGGCC+GGG | - | chr2.4:9407756-9407775 | MS.gene31397:intron | 55.0% | |
| GAATGGCCAAGTGAAGGAGC+TGG | - | chr2.4:9407684-9407703 | MS.gene31397:intron | 55.0% | |
| GCAACTTGAACGCCAAGTCG+AGG | - | chr2.4:9408635-9408654 | MS.gene31397:intron | 55.0% | |
| GCAGCTTGAAGGCCGATTGA+AGG | - | chr2.4:9407510-9407529 | MS.gene31397:intron | 55.0% | |
| GGAAAGCCAAGTGAAGGAGC+TGG | - | chr2.4:9407420-9407439 | MS.gene31397:intron | 55.0% | |
| GGGATTTGAAGGCCGACTGA+AGG | - | chr2.4:9408077-9408096 | MS.gene31397:CDS | 55.0% | |
| GTAGCAAAGGAAGGGCAGCT+CGG | - | chr2.4:9407298-9407317 | MS.gene31397:intron | 55.0% | |
| TGAAGGCCGACTGAAGGATC+TGG | - | chr2.4:9408083-9408102 | MS.gene31397:CDS | 55.0% | |
| TGAAGGCCGAGTGAATGAGC+TGG | - | chr2.4:9407558-9407577 | MS.gene31397:intron | 55.0% | |
| TGAATTTGAAGGCCGGGCGA+AGG | - | chr2.4:9408383-9408402 | MS.gene31397:intron | 55.0% | |
| TGCTCAGCACAAGACAGCTG+TGG | - | chr2.4:9409762-9409781 | MS.gene31397:CDS | 55.0% | |
| ! | GCAACTTGATGGCCGACTGA+AGG | - | chr2.4:9408341-9408360 | MS.gene31397:CDS | 55.0% |
| CAGATTCGAGCTCCTTCGCC+CGG | + | chr2.4:9408398-9408417 | None:intergenic | 60.0% | |
| TGGTCTCCCTCGTTACACCG+TGG | + | chr2.4:9409511-9409530 | None:intergenic | 60.0% | |
| ! | AGGGCAGCTCGGTTTGATGG+AGG | - | chr2.4:9407309-9407328 | MS.gene31397:intron | 60.0% |
| ! | GGAAGGGCAGCTCGGTTTGA+TGG | - | chr2.4:9407306-9407325 | MS.gene31397:intron | 60.0% |
| GCAACATGAGGGCCGGGTGA+TGG | - | chr2.4:9408173-9408192 | MS.gene31397:CDS | 65.0% | |
| GCAGCATGAAGGCCGGGTGA+AGG | - | chr2.4:9407762-9407781 | MS.gene31397:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 9406758 | 9410964 | 9406758 | ID=MS.gene31397 |
| chr2.4 | mRNA | 9406758 | 9410964 | 9406758 | ID=MS.gene31397.t1;Parent=MS.gene31397 |
| chr2.4 | exon | 9408843 | 9410964 | 9408843 | ID=MS.gene31397.t1.exon1;Parent=MS.gene31397.t1 |
| chr2.4 | CDS | 9408843 | 9410964 | 9408843 | ID=cds.MS.gene31397.t1;Parent=MS.gene31397.t1 |
| chr2.4 | exon | 9407899 | 9408366 | 9407899 | ID=MS.gene31397.t1.exon2;Parent=MS.gene31397.t1 |
| chr2.4 | CDS | 9407899 | 9408366 | 9407899 | ID=cds.MS.gene31397.t1;Parent=MS.gene31397.t1 |
| chr2.4 | exon | 9406758 | 9406840 | 9406758 | ID=MS.gene31397.t1.exon3;Parent=MS.gene31397.t1 |
| chr2.4 | CDS | 9406758 | 9406840 | 9406758 | ID=cds.MS.gene31397.t1;Parent=MS.gene31397.t1 |
| Gene Sequence |
| Protein sequence |
