Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057116.t1 | XP_003602268.1 | 96.5 | 141 | 4 | 1 | 1 | 141 | 1 | 140 | 1.30E-69 | 272.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057116.t1 | G7J7F8 | 96.5 | 141 | 4 | 1 | 1 | 141 | 1 | 140 | 9.1e-70 | 272.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057114 | MS.gene057116 | 0.982605 | 1.59E-155 | -1.69E-46 |
| MS.gene057116 | MS.gene06907 | 0.816586 | 5.12E-52 | -1.69E-46 |
| MS.gene057116 | MS.gene06909 | 0.802345 | 5.86E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013579 | MS.gene057116 | PPI |
| MS.gene057114 | MS.gene057116 | PPI |
| MS.gene059160 | MS.gene057116 | PPI |
| MS.gene057116 | MS.gene059160 | PPI |
| MS.gene057116 | MS.gene057114 | PPI |
| MS.gene057116 | MS.gene06909 | PPI |
| MS.gene057116 | MS.gene059161 | PPI |
| MS.gene057116 | MS.gene54540 | PPI |
| MS.gene057116 | MS.gene06696 | PPI |
| MS.gene06696 | MS.gene057116 | PPI |
| MS.gene057116 | MS.gene06907 | PPI |
| MS.gene057116 | MS.gene021450 | PPI |
| MS.gene057116 | MS.gene059162 | PPI |
| MS.gene059162 | MS.gene057116 | PPI |
| MS.gene057116 | MS.gene013579 | PPI |
| MS.gene057116 | MS.gene31640 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057116.t1 | MTR_3g091680 | 95.775 | 142 | 5 | 1 | 1 | 142 | 1 | 141 | 1.70e-96 | 275 |
| MS.gene057116.t1 | MTR_1g007905 | 55.484 | 155 | 55 | 5 | 1 | 142 | 36 | 189 | 1.47e-44 | 145 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057116.t1 | AT5G53030 | 36.313 | 179 | 72 | 7 | 5 | 142 | 37 | 214 | 1.98e-17 | 75.9 |
| MS.gene057116.t1 | AT5G53030 | 35.556 | 180 | 74 | 7 | 5 | 143 | 37 | 215 | 3.44e-17 | 75.5 |
| MS.gene057116.t1 | AT4G27810 | 35.762 | 151 | 72 | 5 | 5 | 143 | 33 | 170 | 4.65e-12 | 61.2 |
Find 52 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAACTGGAATTCCAATTT+TGG | 0.127410 | 3.1:+73629920 | MS.gene057116:CDS |
| CTAGCAGGTGGAGTGGTTTC+AGG | 0.269736 | 3.1:+73629945 | MS.gene057116:CDS |
| CCACCTGCTAGACCCAAAAT+TGG | 0.283838 | 3.1:-73629933 | None:intergenic |
| TCACCTACAACTGTGTTAGA+TGG | 0.315146 | 3.1:+73629845 | MS.gene057116:CDS |
| ATAGAACTCCAAGGGAAAAC+TGG | 0.328757 | 3.1:+73629906 | MS.gene057116:CDS |
| TGGTTTCAGGAAGATTAATA+AGG | 0.332948 | 3.1:+73629958 | MS.gene057116:CDS |
| CTTGAAAGGAATTGAAATCA+TGG | 0.366715 | 3.1:-73629696 | None:intergenic |
| AAAGGGAAAATCACATTTGT+GGG | 0.419238 | 3.1:+73630063 | MS.gene057116:CDS |
| TGGTAGTGCCTAGGCTTCCC+TGG | 0.422749 | 3.1:-73629731 | None:intergenic |
| CAACCTTGGAACTGCCTCCT+AGG | 0.434449 | 3.1:+73629786 | MS.gene057116:CDS |
| CAAAGGGAAAATCACATTTG+TGG | 0.438574 | 3.1:+73630062 | MS.gene057116:CDS |
| TAGATGGGCCTTACGTGGGC+CGG | 0.448015 | 3.1:+73629861 | MS.gene057116:CDS |
| ATTAATAAGGAAGGAGATGA+GGG | 0.450852 | 3.1:+73629971 | MS.gene057116:CDS |
| TGAAGGAACATCAACCTTGT+TGG | 0.458738 | 3.1:-73629825 | None:intergenic |
| TTCAAGTGGGAGGAAGCACC+AGG | 0.461383 | 3.1:+73629713 | MS.gene057116:CDS |
| CTGTATTGTCGAGCTCTGAT+TGG | 0.465440 | 3.1:-73629757 | None:intergenic |
| AGATGGGCCTTACGTGGGCC+GGG | 0.475085 | 3.1:+73629862 | MS.gene057116:CDS |
| GGAATTGAAATCATGGTTTG+AGG | 0.484375 | 3.1:-73629689 | None:intergenic |
| TTCAGGAAGATTAATAAGGA+AGG | 0.487183 | 3.1:+73629962 | MS.gene057116:CDS |
| GGAGGAAGTCCCATTTCAAA+GGG | 0.501251 | 3.1:+73630046 | MS.gene057116:CDS |
| AGGAAGCACCAGGGAAGCCT+AGG | 0.504051 | 3.1:+73629723 | MS.gene057116:CDS |
| AAGATGTCACGGGCTGCTAA+AGG | 0.520498 | 3.1:+73630025 | MS.gene057116:CDS |
| GGCCCATCTAACACAGTTGT+AGG | 0.520900 | 3.1:-73629848 | None:intergenic |
| GACATGGCCCGGCCCACGTA+AGG | 0.522178 | 3.1:-73629869 | None:intergenic |
| GATTGGGTGTGGTAGTGCCT+AGG | 0.526775 | 3.1:-73629740 | None:intergenic |
| GATTAATAAGGAAGGAGATG+AGG | 0.528348 | 3.1:+73629970 | MS.gene057116:CDS |
| AGGAGGAAGTCCCATTTCAA+AGG | 0.530152 | 3.1:+73630045 | MS.gene057116:CDS |
| TGTATTGTCGAGCTCTGATT+GGG | 0.531093 | 3.1:-73629756 | None:intergenic |
| CACCTACAACTGTGTTAGAT+GGG | 0.532506 | 3.1:+73629846 | MS.gene057116:CDS |
| AAGAAGTGAAGGACATGGCC+CGG | 0.535442 | 3.1:-73629880 | None:intergenic |
| GGTGCTTCCTCCCACTTGAA+AGG | 0.541875 | 3.1:-73629710 | None:intergenic |
| TGATTTCAATTCCTTTCAAG+TGG | 0.550003 | 3.1:+73629699 | MS.gene057116:CDS |
| TTCAATTCCTTTCAAGTGGG+AGG | 0.551211 | 3.1:+73629703 | MS.gene057116:CDS |
| TTTGGGTCTAGCAGGTGGAG+TGG | 0.556268 | 3.1:+73629938 | MS.gene057116:CDS |
| TGTGTTAGATGGGCCTTACG+TGG | 0.559160 | 3.1:+73629856 | MS.gene057116:CDS |
| CAATACAGTTAGAACAACCT+TGG | 0.565902 | 3.1:+73629772 | MS.gene057116:CDS |
| TCAACAACCAATAATGTCAT+CGG | 0.578794 | 3.1:+73629649 | None:intergenic |
| AGAATAAGGTGAAGATGTCA+CGG | 0.584256 | 3.1:+73630014 | MS.gene057116:CDS |
| GATTTCAATTCCTTTCAAGT+GGG | 0.605733 | 3.1:+73629700 | MS.gene057116:CDS |
| CTTCTTCCTATAGAACTCCA+AGG | 0.606398 | 3.1:+73629897 | MS.gene057116:CDS |
| TGTCGAGCTCTGATTGGGTG+TGG | 0.614054 | 3.1:-73629751 | None:intergenic |
| CATGGTTTGAGGTGGTGACA+TGG | 0.621041 | 3.1:-73629678 | None:intergenic |
| ATGTCACGGGCTGCTAAAGG+AGG | 0.635685 | 3.1:+73630028 | MS.gene057116:CDS |
| CAACCTAGGAGGCAGTTCCA+AGG | 0.636697 | 3.1:-73629789 | None:intergenic |
| GAATAAGGTGAAGATGTCAC+GGG | 0.637192 | 3.1:+73630015 | MS.gene057116:CDS |
| TCTAACACAGTTGTAGGTGA+AGG | 0.645082 | 3.1:-73629842 | None:intergenic |
| TTCTTCCTATAGAACTCCAA+GGG | 0.650470 | 3.1:+73629898 | MS.gene057116:CDS |
| GTGTTAGATGGGCCTTACGT+GGG | 0.653028 | 3.1:+73629857 | MS.gene057116:CDS |
| AGTTCTATAGGAAGAAGTGA+AGG | 0.661579 | 3.1:-73629891 | None:intergenic |
| ATTGAAATCATGGTTTGAGG+TGG | 0.684990 | 3.1:-73629686 | None:intergenic |
| ATAGGAAGAAGTGAAGGACA+TGG | 0.705802 | 3.1:-73629885 | None:intergenic |
| TCAAGTGGGAGGAAGCACCA+GGG | 0.732644 | 3.1:+73629714 | MS.gene057116:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAACTTCAAATAATTA+TGG | - | chr3.1:73630928-73630947 | None:intergenic | 10.0% |
| !! | AGACTAAAAATATATTTAAT+AGG | - | chr3.1:73630905-73630924 | None:intergenic | 10.0% |
| !! | TACATATGTAATAAAATTCT+AGG | - | chr3.1:73631222-73631241 | None:intergenic | 15.0% |
| !!! | TAAGTATTTCTATATATAGT+TGG | + | chr3.1:73630478-73630497 | MS.gene057116:intron | 15.0% |
| !!! | TTTTGATATTTTTTATACTC+TGG | + | chr3.1:73631193-73631212 | MS.gene057116:intron | 15.0% |
| !! | AAAAGAGAGAATGATAATTT+AGG | - | chr3.1:73630412-73630431 | None:intergenic | 20.0% |
| !! | AAAATGAAAGACAAATTTGA+TGG | + | chr3.1:73630442-73630461 | MS.gene057116:intron | 20.0% |
| !! | AAACATTAGTGAGATTAAAA+AGG | + | chr3.1:73631170-73631189 | MS.gene057116:intron | 20.0% |
| !! | AAAGAATGATGAAAAATTGT+AGG | + | chr3.1:73631557-73631576 | MS.gene057116:intron | 20.0% |
| !! | ATGTATGTAGTCTTTATTAT+AGG | - | chr3.1:73630290-73630309 | None:intergenic | 20.0% |
| !!! | AAATTAGTTTAAGGACTATT+TGG | - | chr3.1:73630372-73630391 | None:intergenic | 20.0% |
| !!! | AGTCAATTTTCTCTTATAAA+TGG | - | chr3.1:73630635-73630654 | None:intergenic | 20.0% |
| !!! | ATTTTGCTTATATTAGTGAT+CGG | + | chr3.1:73630338-73630357 | MS.gene057116:intron | 20.0% |
| !!! | GATAGATTCAAATTAGTTTA+AGG | - | chr3.1:73630381-73630400 | None:intergenic | 20.0% |
| !!! | GTCAATTTTCTCTTATAAAT+GGG | - | chr3.1:73630634-73630653 | None:intergenic | 20.0% |
| !!! | TTCATAATATGAAGTTTTGT+CGG | - | chr3.1:73631325-73631344 | None:intergenic | 20.0% |
| !!! | TTTCTTTTACTAACCATTTT+GGG | + | chr3.1:73631415-73631434 | MS.gene057116:intron | 20.0% |
| !!! | TTTTCTTTTACTAACCATTT+TGG | + | chr3.1:73631414-73631433 | MS.gene057116:intron | 20.0% |
| !!! | TTTTTTCATAATCAAACTAG+TGG | + | chr3.1:73631347-73631366 | MS.gene057116:intron | 20.0% |
| ! | ACCTAGAGTTAGAAATTAAA+TGG | - | chr3.1:73631493-73631512 | None:intergenic | 25.0% |
| ! | CCTAGAGTTAGAAATTAAAT+GGG | - | chr3.1:73631492-73631511 | None:intergenic | 25.0% |
| ! | CTAATTTGAATCTATCAAGA+TGG | + | chr3.1:73630385-73630404 | MS.gene057116:intron | 25.0% |
| ! | GTAAATTGTCTCTTGTAAAT+AGG | + | chr3.1:73630733-73630752 | MS.gene057116:intron | 25.0% |
| !! | AAAACTGGAATTCCAATTTT+GGG | + | chr3.1:73629921-73629940 | MS.gene057116:CDS | 25.0% |
| !! | CTTTTGCTTATATTAGTGAT+TGG | - | chr3.1:73630229-73630248 | None:intergenic | 25.0% |
| !!! | TATATTGATGCAAAAGCATT+TGG | - | chr3.1:73630142-73630161 | None:intergenic | 25.0% |
| !!! | TCATAATATGAAGTTTTGTC+GGG | - | chr3.1:73631324-73631343 | None:intergenic | 25.0% |
| AAAGGGAAAATCACATTTGT+GGG | + | chr3.1:73630063-73630082 | MS.gene057116:CDS | 30.0% | |
| AACTAGCAATGACTAACAAA+TGG | - | chr3.1:73631122-73631141 | None:intergenic | 30.0% | |
| AACTCTAGGTAGTAAGAAAT+TGG | + | chr3.1:73631503-73631522 | MS.gene057116:intron | 30.0% | |
| ATTAATAAGGAAGGAGATGA+GGG | + | chr3.1:73629971-73629990 | MS.gene057116:CDS | 30.0% | |
| CCATAAATCCAGTCTATAAA+TGG | - | chr3.1:73630515-73630534 | None:intergenic | 30.0% | |
| CCATTTATAGACTGGATTTA+TGG | + | chr3.1:73630512-73630531 | MS.gene057116:intron | 30.0% | |
| CTTGAAAGGAATTGAAATCA+TGG | - | chr3.1:73629699-73629718 | None:intergenic | 30.0% | |
| TACCTGCTATAATATTCTGT+CGG | + | chr3.1:73631460-73631479 | MS.gene057116:intron | 30.0% | |
| TCAATTATTCACATAGCGTA+CGG | - | chr3.1:73630760-73630779 | None:intergenic | 30.0% | |
| TGATTTCAATTCCTTTCAAG+TGG | + | chr3.1:73629699-73629718 | MS.gene057116:CDS | 30.0% | |
| TGGTTTCAGGAAGATTAATA+AGG | + | chr3.1:73629958-73629977 | MS.gene057116:CDS | 30.0% | |
| TTATAGCAGGTAAATATGCA+TGG | - | chr3.1:73631452-73631471 | None:intergenic | 30.0% | |
| TTCAGGAAGATTAATAAGGA+AGG | + | chr3.1:73629962-73629981 | MS.gene057116:CDS | 30.0% | |
| ! | CAAGATTTAAAACCAGTGTT+TGG | - | chr3.1:73631083-73631102 | None:intergenic | 30.0% |
| ! | CCCATTTAATTTCTAACTCT+AGG | + | chr3.1:73631489-73631508 | MS.gene057116:intron | 30.0% |
| ! | GAAAACTGGAATTCCAATTT+TGG | + | chr3.1:73629920-73629939 | MS.gene057116:CDS | 30.0% |
| ! | GATTTCAATTCCTTTCAAGT+GGG | + | chr3.1:73629700-73629719 | MS.gene057116:CDS | 30.0% |
| ! | TTTTCTCTTATAAATGGGAC+CGG | - | chr3.1:73630629-73630648 | None:intergenic | 30.0% |
| !! | ATGTGATTTTCCCTTTGAAA+TGG | - | chr3.1:73630059-73630078 | None:intergenic | 30.0% |
| !!! | TGTGATTTTCCCTTTGAAAT+GGG | - | chr3.1:73630058-73630077 | None:intergenic | 30.0% |
| AGAATAAGGTGAAGATGTCA+CGG | + | chr3.1:73630014-73630033 | MS.gene057116:CDS | 35.0% | |
| AGTTCTATAGGAAGAAGTGA+AGG | - | chr3.1:73629894-73629913 | None:intergenic | 35.0% | |
| ATAAAAGAGTTGGAGGTCAT+GGG | - | chr3.1:73631016-73631035 | None:intergenic | 35.0% | |
| ATTGAAATCATGGTTTGAGG+TGG | - | chr3.1:73629689-73629708 | None:intergenic | 35.0% | |
| CAAAGGGAAAATCACATTTG+TGG | + | chr3.1:73630062-73630081 | MS.gene057116:CDS | 35.0% | |
| CAATACAGTTAGAACAACCT+TGG | + | chr3.1:73629772-73629791 | MS.gene057116:CDS | 35.0% | |
| CTAGGTAGTAAGAAATTGGT+AGG | + | chr3.1:73631507-73631526 | MS.gene057116:intron | 35.0% | |
| GATTAATAAGGAAGGAGATG+AGG | + | chr3.1:73629970-73629989 | MS.gene057116:CDS | 35.0% | |
| GGAATTGAAATCATGGTTTG+AGG | - | chr3.1:73629692-73629711 | None:intergenic | 35.0% | |
| TACCGACAGAATATTATAGC+AGG | - | chr3.1:73631465-73631484 | None:intergenic | 35.0% | |
| TAGTTGAGTTATCCAAACAC+TGG | + | chr3.1:73631068-73631087 | MS.gene057116:intron | 35.0% | |
| TTCTTCCTATAGAACTCCAA+GGG | + | chr3.1:73629898-73629917 | MS.gene057116:CDS | 35.0% | |
| TTGCTTATATTAGTGATCGG+AGG | + | chr3.1:73630341-73630360 | MS.gene057116:intron | 35.0% | |
| ! | AACTCAACTAGTTTGAGACT+AGG | - | chr3.1:73631058-73631077 | None:intergenic | 35.0% |
| ! | ACTCAACTAGTTTGAGACTA+GGG | - | chr3.1:73631057-73631076 | None:intergenic | 35.0% |
| ! | GAATCTTTTAATACTCCCTC+CGG | + | chr3.1:73630607-73630626 | MS.gene057116:intron | 35.0% |
| ! | TAACCATTTTGGGCTAATTG+CGG | + | chr3.1:73631425-73631444 | MS.gene057116:intron | 35.0% |
| !!! | TGAGGGTAGTTTTGACTTTT+CGG | + | chr3.1:73629988-73630007 | MS.gene057116:CDS | 35.0% |
| ATAGAACTCCAAGGGAAAAC+TGG | + | chr3.1:73629906-73629925 | MS.gene057116:CDS | 40.0% | |
| ATAGGAAGAAGTGAAGGACA+TGG | - | chr3.1:73629888-73629907 | None:intergenic | 40.0% | |
| CACCTACAACTGTGTTAGAT+GGG | + | chr3.1:73629846-73629865 | MS.gene057116:CDS | 40.0% | |
| CATAAAAGAGTTGGAGGTCA+TGG | - | chr3.1:73631017-73631036 | None:intergenic | 40.0% | |
| CTTCTTCCTATAGAACTCCA+AGG | + | chr3.1:73629897-73629916 | MS.gene057116:CDS | 40.0% | |
| GAATAAGGTGAAGATGTCAC+GGG | + | chr3.1:73630015-73630034 | MS.gene057116:CDS | 40.0% | |
| GAGAGTGACCATTTATAGAC+TGG | + | chr3.1:73630504-73630523 | MS.gene057116:intron | 40.0% | |
| GCTTCCAAAAATAGCAACCT+AGG | - | chr3.1:73629806-73629825 | None:intergenic | 40.0% | |
| GTTGGAGGTCATAAAAGAGT+TGG | - | chr3.1:73631026-73631045 | None:intergenic | 40.0% | |
| TCACCTACAACTGTGTTAGA+TGG | + | chr3.1:73629845-73629864 | MS.gene057116:CDS | 40.0% | |
| TCCAAAAATAGCAACCTAGG+AGG | - | chr3.1:73629803-73629822 | None:intergenic | 40.0% | |
| TCTAACACAGTTGTAGGTGA+AGG | - | chr3.1:73629845-73629864 | None:intergenic | 40.0% | |
| TGAAGGAACATCAACCTTGT+TGG | - | chr3.1:73629828-73629847 | None:intergenic | 40.0% | |
| ! | GTTTTCCCTTGGAGTTCTAT+AGG | - | chr3.1:73629906-73629925 | None:intergenic | 40.0% |
| ! | TGTATTGTCGAGCTCTGATT+GGG | - | chr3.1:73629759-73629778 | None:intergenic | 40.0% |
| ! | TTCAATTCCTTTCAAGTGGG+AGG | + | chr3.1:73629703-73629722 | MS.gene057116:CDS | 40.0% |
| ! | TTGGAATTCCAGTTTTCCCT+TGG | - | chr3.1:73629917-73629936 | None:intergenic | 40.0% |
| !! | ATTCCAATTTTGGGTCTAGC+AGG | + | chr3.1:73629930-73629949 | MS.gene057116:CDS | 40.0% |
| !!! | GAGGGTAGTTTTGACTTTTC+GGG | + | chr3.1:73629989-73630008 | MS.gene057116:CDS | 40.0% |
| !!! | GCTATTTTTGGAAGCCAACA+AGG | + | chr3.1:73629811-73629830 | MS.gene057116:CDS | 40.0% |
| !!! | TGACTTTTCGGGTCAGAATA+AGG | + | chr3.1:73630000-73630019 | MS.gene057116:CDS | 40.0% |
| ACTAGGGCTAAAAGAGTTGG+AGG | - | chr3.1:73631041-73631060 | None:intergenic | 45.0% | |
| AGGAGGAAGTCCCATTTCAA+AGG | + | chr3.1:73630045-73630064 | MS.gene057116:CDS | 45.0% | |
| CTCTTATAAATGGGACCGGA+GGG | - | chr3.1:73630625-73630644 | None:intergenic | 45.0% | |
| GAGACTAGGGCTAAAAGAGT+TGG | - | chr3.1:73631044-73631063 | None:intergenic | 45.0% | |
| GGAGGAAGTCCCATTTCAAA+GGG | + | chr3.1:73630046-73630065 | MS.gene057116:CDS | 45.0% | |
| GGAGGTCATAAAAGAGTTGG+AGG | - | chr3.1:73631023-73631042 | None:intergenic | 45.0% | |
| TCTCTTATAAATGGGACCGG+AGG | - | chr3.1:73630626-73630645 | None:intergenic | 45.0% | |
| ! | CTGTATTGTCGAGCTCTGAT+TGG | - | chr3.1:73629760-73629779 | None:intergenic | 45.0% |
| !!! | GCCTCCTAGGTTGCTATTTT+TGG | + | chr3.1:73629799-73629818 | MS.gene057116:CDS | 45.0% |
| !!! | AATTATATATATTTTTTGAA+AGG | + | chr3.1:73630868-73630887 | MS.gene057116:intron | 5.0% |
| AAGAAGTGAAGGACATGGCC+CGG | - | chr3.1:73629883-73629902 | None:intergenic | 50.0% | |
| CCACCTGCTAGACCCAAAAT+TGG | - | chr3.1:73629936-73629955 | None:intergenic | 50.0% | |
| GGCCCATCTAACACAGTTGT+AGG | - | chr3.1:73629851-73629870 | None:intergenic | 50.0% | |
| GGTCCGCAATTAGCCCAAAA+TGG | - | chr3.1:73631431-73631450 | None:intergenic | 50.0% | |
| GTGTTAGATGGGCCTTACGT+GGG | + | chr3.1:73629857-73629876 | MS.gene057116:CDS | 50.0% | |
| TGTGTTAGATGGGCCTTACG+TGG | + | chr3.1:73629856-73629875 | MS.gene057116:CDS | 50.0% | |
| ! | AAGATGTCACGGGCTGCTAA+AGG | + | chr3.1:73630025-73630044 | MS.gene057116:CDS | 50.0% |
| ! | CATGGTTTGAGGTGGTGACA+TGG | - | chr3.1:73629681-73629700 | None:intergenic | 50.0% |
| !! | CCAATTTTGGGTCTAGCAGG+TGG | + | chr3.1:73629933-73629952 | MS.gene057116:CDS | 50.0% |
| CAACCTAGGAGGCAGTTCCA+AGG | - | chr3.1:73629792-73629811 | None:intergenic | 55.0% | |
| CAACCTTGGAACTGCCTCCT+AGG | + | chr3.1:73629786-73629805 | MS.gene057116:CDS | 55.0% | |
| CTAGCAGGTGGAGTGGTTTC+AGG | + | chr3.1:73629945-73629964 | MS.gene057116:CDS | 55.0% | |
| GGTGCTTCCTCCCACTTGAA+AGG | - | chr3.1:73629713-73629732 | None:intergenic | 55.0% | |
| TTTGGGTCTAGCAGGTGGAG+TGG | + | chr3.1:73629938-73629957 | MS.gene057116:CDS | 55.0% | |
| ! | ATGTCACGGGCTGCTAAAGG+AGG | + | chr3.1:73630028-73630047 | MS.gene057116:CDS | 55.0% |
| ! | GATTGGGTGTGGTAGTGCCT+AGG | - | chr3.1:73629743-73629762 | None:intergenic | 55.0% |
| ! | TGTCGAGCTCTGATTGGGTG+TGG | - | chr3.1:73629754-73629773 | None:intergenic | 55.0% |
| !! | TCAAGTGGGAGGAAGCACCA+GGG | + | chr3.1:73629714-73629733 | MS.gene057116:CDS | 55.0% |
| !! | TTCAAGTGGGAGGAAGCACC+AGG | + | chr3.1:73629713-73629732 | MS.gene057116:CDS | 55.0% |
| TAGATGGGCCTTACGTGGGC+CGG | + | chr3.1:73629861-73629880 | MS.gene057116:CDS | 60.0% | |
| ! | TGGTAGTGCCTAGGCTTCCC+TGG | - | chr3.1:73629734-73629753 | None:intergenic | 60.0% |
| !! | AGGAAGCACCAGGGAAGCCT+AGG | + | chr3.1:73629723-73629742 | MS.gene057116:CDS | 60.0% |
| AGATGGGCCTTACGTGGGCC+GGG | + | chr3.1:73629862-73629881 | MS.gene057116:CDS | 65.0% | |
| GACATGGCCCGGCCCACGTA+AGG | - | chr3.1:73629872-73629891 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 73629662 | 73631587 | 73629662 | ID=MS.gene057116 |
| chr3.1 | mRNA | 73629662 | 73631587 | 73629662 | ID=MS.gene057116.t1;Parent=MS.gene057116 |
| chr3.1 | exon | 73629662 | 73630084 | 73629662 | ID=MS.gene057116.t1.exon1;Parent=MS.gene057116.t1 |
| chr3.1 | CDS | 73629662 | 73630084 | 73629662 | ID=cds.MS.gene057116.t1;Parent=MS.gene057116.t1 |
| chr3.1 | exon | 73631579 | 73631587 | 73631579 | ID=MS.gene057116.t1.exon2;Parent=MS.gene057116.t1 |
| chr3.1 | CDS | 73631579 | 73631587 | 73631579 | ID=cds.MS.gene057116.t1;Parent=MS.gene057116.t1 |
| Gene Sequence |
| Protein sequence |
