Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54540.t1 | XP_013465692.1 | 91 | 189 | 16 | 1 | 1 | 189 | 1 | 188 | 4.50E-91 | 344 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54540.t1 | A0A072VE41 | 91.0 | 189 | 16 | 1 | 1 | 189 | 1 | 188 | 3.3e-91 | 344.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049159 | MS.gene54540 | 0.812291 | 4.57E-51 | -1.69E-46 |
MS.gene049378 | MS.gene54540 | 0.809929 | 1.48E-50 | -1.69E-46 |
MS.gene049435 | MS.gene54540 | 0.809162 | 2.17E-50 | -1.69E-46 |
MS.gene050105 | MS.gene54540 | 0.807753 | 4.33E-50 | -1.69E-46 |
MS.gene050226 | MS.gene54540 | 0.818461 | 1.94E-52 | -1.69E-46 |
MS.gene050228 | MS.gene54540 | 0.809001 | 2.35E-50 | -1.69E-46 |
MS.gene050442 | MS.gene54540 | 0.83806 | 3.60E-57 | -1.69E-46 |
MS.gene050605 | MS.gene54540 | 0.804296 | 2.31E-49 | -1.69E-46 |
MS.gene050680 | MS.gene54540 | 0.858931 | 5.87E-63 | -1.69E-46 |
MS.gene050750 | MS.gene54540 | 0.819765 | 9.78E-53 | -1.69E-46 |
MS.gene050820 | MS.gene54540 | 0.803718 | 3.05E-49 | -1.69E-46 |
MS.gene050826 | MS.gene54540 | 0.847439 | 1.16E-59 | -1.69E-46 |
MS.gene050953 | MS.gene54540 | 0.818399 | 2.00E-52 | -1.69E-46 |
MS.gene051198 | MS.gene54540 | 0.814402 | 1.57E-51 | -1.69E-46 |
MS.gene051368 | MS.gene54540 | 0.827457 | 1.55E-54 | -1.69E-46 |
MS.gene051800 | MS.gene54540 | 0.803601 | 3.23E-49 | -1.69E-46 |
MS.gene051924 | MS.gene54540 | -0.807551 | 4.78E-50 | -1.69E-46 |
MS.gene051926 | MS.gene54540 | -0.81123 | 7.77E-51 | -1.69E-46 |
MS.gene052333 | MS.gene54540 | 0.828025 | 1.13E-54 | -1.69E-46 |
MS.gene052426 | MS.gene54540 | 0.812235 | 4.70E-51 | -1.69E-46 |
MS.gene052674 | MS.gene54540 | 0.808149 | 3.57E-50 | -1.69E-46 |
MS.gene052675 | MS.gene54540 | 0.806832 | 6.79E-50 | -1.69E-46 |
MS.gene052677 | MS.gene54540 | 0.822637 | 2.13E-53 | -1.69E-46 |
MS.gene053008 | MS.gene54540 | 0.808632 | 2.82E-50 | -1.69E-46 |
MS.gene053166 | MS.gene54540 | 0.861968 | 7.07E-64 | -1.69E-46 |
MS.gene053494 | MS.gene54540 | 0.803678 | 3.11E-49 | -1.69E-46 |
MS.gene053555 | MS.gene54540 | 0.818912 | 1.53E-52 | -1.69E-46 |
MS.gene053565 | MS.gene54540 | 0.810805 | 9.60E-51 | -1.69E-46 |
MS.gene053584 | MS.gene54540 | 0.805916 | 1.06E-49 | -1.69E-46 |
MS.gene05415 | MS.gene54540 | 0.838538 | 2.71E-57 | -1.69E-46 |
MS.gene054291 | MS.gene54540 | -0.826531 | 2.58E-54 | -1.69E-46 |
MS.gene054379 | MS.gene54540 | 0.817489 | 3.21E-52 | -1.69E-46 |
MS.gene054405 | MS.gene54540 | 0.815735 | 7.94E-52 | -1.69E-46 |
MS.gene054468 | MS.gene54540 | 0.821252 | 4.46E-53 | -1.69E-46 |
MS.gene054559 | MS.gene54540 | 0.832564 | 8.80E-56 | -1.69E-46 |
MS.gene054657 | MS.gene54540 | 0.818158 | 2.27E-52 | -1.69E-46 |
MS.gene05510 | MS.gene54540 | 0.85493 | 8.86E-62 | -1.69E-46 |
MS.gene055227 | MS.gene54540 | 0.805811 | 1.11E-49 | -1.69E-46 |
MS.gene055356 | MS.gene54540 | 0.817469 | 3.24E-52 | -1.69E-46 |
MS.gene055358 | MS.gene54540 | 0.827335 | 1.66E-54 | -1.69E-46 |
MS.gene055367 | MS.gene54540 | 0.806603 | 7.59E-50 | -1.69E-46 |
MS.gene055701 | MS.gene54540 | 0.883432 | 4.51E-71 | -1.69E-46 |
MS.gene055818 | MS.gene54540 | 0.813066 | 3.09E-51 | -1.69E-46 |
MS.gene055926 | MS.gene54540 | 0.830554 | 2.75E-55 | -1.69E-46 |
MS.gene05604 | MS.gene54540 | 0.825503 | 4.52E-54 | -1.69E-46 |
MS.gene056480 | MS.gene54540 | 0.81958 | 1.08E-52 | -1.69E-46 |
MS.gene056506 | MS.gene54540 | 0.834127 | 3.59E-56 | -1.69E-46 |
MS.gene057026 | MS.gene54540 | 0.805032 | 1.62E-49 | -1.69E-46 |
MS.gene057060 | MS.gene54540 | 0.802726 | 4.89E-49 | -1.69E-46 |
MS.gene057156 | MS.gene54540 | -0.848304 | 6.68E-60 | -1.69E-46 |
MS.gene057444 | MS.gene54540 | 0.8127 | 3.71E-51 | -1.69E-46 |
MS.gene057869 | MS.gene54540 | 0.802561 | 5.29E-49 | -1.69E-46 |
MS.gene058146 | MS.gene54540 | 0.811875 | 5.62E-51 | -1.69E-46 |
MS.gene058595 | MS.gene54540 | 0.806158 | 9.42E-50 | -1.69E-46 |
MS.gene058979 | MS.gene54540 | 0.800053 | 1.73E-48 | -1.69E-46 |
MS.gene059128 | MS.gene54540 | 0.843957 | 1.02E-58 | -1.69E-46 |
MS.gene059160 | MS.gene54540 | 0.928305 | 3.48E-92 | -1.69E-46 |
MS.gene059161 | MS.gene54540 | 0.990812 | 1.91E-184 | -1.69E-46 |
MS.gene059162 | MS.gene54540 | 0.940344 | 2.74E-100 | -1.69E-46 |
MS.gene059607 | MS.gene54540 | 0.817964 | 2.51E-52 | -1.69E-46 |
MS.gene059609 | MS.gene54540 | 0.848131 | 7.45E-60 | -1.69E-46 |
MS.gene060011 | MS.gene54540 | 0.831002 | 2.14E-55 | -1.69E-46 |
MS.gene060137 | MS.gene54540 | -0.810389 | 1.18E-50 | -1.69E-46 |
MS.gene060322 | MS.gene54540 | 0.851052 | 1.14E-60 | -1.69E-46 |
MS.gene06052 | MS.gene54540 | 0.815226 | 1.03E-51 | -1.69E-46 |
MS.gene060683 | MS.gene54540 | 0.811419 | 7.07E-51 | -1.69E-46 |
MS.gene060685 | MS.gene54540 | 0.807058 | 6.08E-50 | -1.69E-46 |
MS.gene060802 | MS.gene54540 | 0.865386 | 6.13E-65 | -1.69E-46 |
MS.gene060803 | MS.gene54540 | 0.841659 | 4.16E-58 | -1.69E-46 |
MS.gene060998 | MS.gene54540 | 0.819997 | 8.66E-53 | -1.69E-46 |
MS.gene061114 | MS.gene54540 | -0.823531 | 1.32E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene06907 | MS.gene54540 | PPI |
MS.gene059161 | MS.gene54540 | PPI |
MS.gene013579 | MS.gene54540 | PPI |
MS.gene54540 | MS.gene06907 | PPI |
MS.gene057114 | MS.gene54540 | PPI |
MS.gene059160 | MS.gene54540 | PPI |
MS.gene057116 | MS.gene54540 | PPI |
MS.gene54540 | MS.gene31640 | PPI |
MS.gene06696 | MS.gene54540 | PPI |
MS.gene021450 | MS.gene54540 | PPI |
MS.gene06909 | MS.gene54540 | PPI |
MS.gene059162 | MS.gene54540 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54540.t1 | MTR_1g007905 | 91.005 | 189 | 16 | 1 | 1 | 189 | 1 | 188 | 4.52e-123 | 346 |
MS.gene54540.t1 | MTR_3g091680 | 55.844 | 154 | 53 | 5 | 37 | 189 | 1 | 140 | 6.26e-44 | 144 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54540.t1 | AT5G53030 | 38.333 | 180 | 70 | 9 | 45 | 189 | 40 | 213 | 1.70e-19 | 82.8 |
MS.gene54540.t1 | AT5G53030 | 38.333 | 180 | 70 | 9 | 45 | 189 | 40 | 213 | 1.94e-19 | 83.2 |
MS.gene54540.t1 | AT4G27810 | 35.176 | 199 | 78 | 11 | 9 | 188 | 1 | 167 | 5.51e-11 | 59.3 |
Find 47 sgRNAs with CRISPR-Local
Find 63 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACAAGGGCAGTGTGAATTT+TGG | 0.173203 | 1.2:-12051318 | MS.gene54540:CDS |
TCCTCCTAGGTTGTTGTCTT+TGG | 0.204117 | 1.2:-12051448 | MS.gene54540:CDS |
TTGTTACCTTCTCTTTCTTT+TGG | 0.308850 | 1.2:+12051492 | None:intergenic |
ACCATCACCAACAACTGTTT+TGG | 0.363972 | 1.2:-12051397 | MS.gene54540:CDS |
TAACAACGTTGTTAGAGCTT+TGG | 0.381783 | 1.2:-12051475 | MS.gene54540:CDS |
CACATGGTACTTCACATTTG+TGG | 0.395630 | 1.2:-12051164 | MS.gene54540:CDS |
TTGGGTCTAGTAGGTGGGGT+GGG | 0.401963 | 1.2:-12051299 | MS.gene54540:CDS |
ATCATGATGATGATGAATTA+AGG | 0.404054 | 1.2:-12051680 | MS.gene54540:CDS |
ACATGGTACTTCACATTTGT+GGG | 0.406088 | 1.2:-12051163 | None:intergenic |
ATAGCCGTCGTTCGCGGTGG+TGG | 0.414893 | 1.2:+12051579 | None:intergenic |
TTTCAAGTTGGAGTGTTGAT+GGG | 0.452572 | 1.2:-12051233 | MS.gene54540:CDS |
TTTAAGTGGGAGGAAGCACC+AGG | 0.462547 | 1.2:-12051546 | MS.gene54540:CDS |
GTCGTTCGCGGTGGTGGAGT+TGG | 0.473237 | 1.2:+12051585 | None:intergenic |
TAGGTTGTTGTCTTTGGAGA+GGG | 0.474181 | 1.2:-12051442 | MS.gene54540:CDS |
GGACCTTCCAAAACAGTTGT+TGG | 0.481823 | 1.2:+12051390 | None:intergenic |
TGACATGACCTAGGCTTCCC+TGG | 0.485647 | 1.2:+12051528 | None:intergenic |
GGTGCTTCCTCCCACTTAAA+CGG | 0.493829 | 1.2:+12051549 | None:intergenic |
GAGCTTTGGAACTTCCTCCT+AGG | 0.498331 | 1.2:-12051461 | MS.gene54540:CDS |
TTTGGGTCTAGTAGGTGGGG+TGG | 0.500229 | 1.2:-12051300 | MS.gene54540:CDS |
GACACTGCACGTCCAACGTA+TGG | 0.515972 | 1.2:+12051369 | None:intergenic |
GATCACAAGAGTTAAGAGAA+GGG | 0.526664 | 1.2:-12051196 | MS.gene54540:CDS |
CTAGGTTGTTGTCTTTGGAG+AGG | 0.533267 | 1.2:-12051443 | MS.gene54540:CDS |
TTCAAGTTGGAGTGTTGATG+GGG | 0.539072 | 1.2:-12051232 | MS.gene54540:CDS |
CTATATCGATACCGTTTAAG+TGG | 0.539738 | 1.2:-12051560 | MS.gene54540:CDS |
AACTCCACCACCGCGAACGA+CGG | 0.539846 | 1.2:-12051583 | MS.gene54540:CDS |
AGGAAGCACCAGGGAAGCCT+AGG | 0.540552 | 1.2:-12051536 | MS.gene54540:CDS |
ATCGATATAGCCGTCGTTCG+CGG | 0.559277 | 1.2:+12051573 | None:intergenic |
AGATCACAAGAGTTAAGAGA+AGG | 0.565850 | 1.2:-12051197 | MS.gene54540:CDS |
ATCACAAGAGTTAAGAGAAG+GGG | 0.589130 | 1.2:-12051195 | MS.gene54540:CDS |
TCCAAAACAGTTGTTGGTGA+TGG | 0.590521 | 1.2:+12051396 | None:intergenic |
ATCGATACCGTTTAAGTGGG+AGG | 0.600972 | 1.2:-12051556 | MS.gene54540:CDS |
CCAGAGCCAAAAGAAAGAGA+AGG | 0.615358 | 1.2:-12051498 | MS.gene54540:CDS |
GTATAGGGATAGTAATAACA+AGG | 0.626999 | 1.2:-12051334 | MS.gene54540:CDS |
CACGGTCGTGATAACACTGG+TGG | 0.632454 | 1.2:+12051624 | None:intergenic |
TCCAAAGACAACAACCTAGG+AGG | 0.639929 | 1.2:+12051447 | None:intergenic |
GGTCGTGTATGACATGACCT+AGG | 0.639981 | 1.2:+12051519 | None:intergenic |
TATATCGATACCGTTTAAGT+GGG | 0.641926 | 1.2:-12051559 | MS.gene54540:CDS |
TCAAGTTGGAGTGTTGATGG+GGG | 0.642096 | 1.2:-12051231 | MS.gene54540:CDS |
AAAAGTCAAAACTACCCTCA+CGG | 0.642581 | 1.2:+12051253 | None:intergenic |
AATAATAGAATTGACCGTGA+GGG | 0.656653 | 1.2:-12051267 | MS.gene54540:CDS |
CTCTCCAAAGACAACAACCT+AGG | 0.661580 | 1.2:+12051444 | None:intergenic |
AAACACGGTCGTGATAACAC+TGG | 0.682213 | 1.2:+12051621 | None:intergenic |
AAATAATAGAATTGACCGTG+AGG | 0.684752 | 1.2:-12051268 | MS.gene54540:CDS |
GATATAGCCGTCGTTCGCGG+TGG | 0.697862 | 1.2:+12051576 | None:intergenic |
TATAGGGATAGTAATAACAA+GGG | 0.698970 | 1.2:-12051333 | MS.gene54540:CDS |
AGAAGGGGAAGCTTCTCACA+TGG | 0.717228 | 1.2:-12051180 | MS.gene54540:CDS |
TTAAGTGGGAGGAAGCACCA+GGG | 0.769568 | 1.2:-12051545 | MS.gene54540:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | TATAGGGATAGTAATAACAA+GGG | - | chr1.2:12051539-12051558 | MS.gene54540:CDS | 25.0% |
!! | ATCATGATGATGATGAATTA+AGG | - | chr1.2:12051192-12051211 | MS.gene54540:CDS | 25.0% |
AAATAATAGAATTGACCGTG+AGG | - | chr1.2:12051604-12051623 | MS.gene54540:CDS | 30.0% | |
AATAATAGAATTGACCGTGA+GGG | - | chr1.2:12051605-12051624 | MS.gene54540:CDS | 30.0% | |
GTATAGGGATAGTAATAACA+AGG | - | chr1.2:12051538-12051557 | MS.gene54540:CDS | 30.0% | |
TATATCGATACCGTTTAAGT+GGG | - | chr1.2:12051313-12051332 | MS.gene54540:CDS | 30.0% | |
! | TTGTTACCTTCTCTTTCTTT+TGG | + | chr1.2:12051383-12051402 | None:intergenic | 30.0% |
!!! | GTAGTTTTGACTTTTCAAGT+TGG | - | chr1.2:12051627-12051646 | MS.gene54540:CDS | 30.0% |
AAAAGTCAAAACTACCCTCA+CGG | + | chr1.2:12051622-12051641 | None:intergenic | 35.0% | |
AGATCACAAGAGTTAAGAGA+AGG | - | chr1.2:12051675-12051694 | MS.gene54540:CDS | 35.0% | |
ATCACAAGAGTTAAGAGAAG+GGG | - | chr1.2:12051677-12051696 | MS.gene54540:CDS | 35.0% | |
CTATATCGATACCGTTTAAG+TGG | - | chr1.2:12051312-12051331 | MS.gene54540:CDS | 35.0% | |
GATCACAAGAGTTAAGAGAA+GGG | - | chr1.2:12051676-12051695 | MS.gene54540:CDS | 35.0% | |
TAACAACGTTGTTAGAGCTT+TGG | - | chr1.2:12051397-12051416 | MS.gene54540:CDS | 35.0% | |
!! | TTTCAAGTTGGAGTGTTGAT+GGG | - | chr1.2:12051639-12051658 | MS.gene54540:CDS | 35.0% |
!!! | TTTTCAAGTTGGAGTGTTGA+TGG | - | chr1.2:12051638-12051657 | MS.gene54540:CDS | 35.0% |
CACATGGTACTTCACATTTG+TGG | - | chr1.2:12051708-12051727 | MS.gene54540:CDS | 40.0% | |
! | AACAAGGGCAGTGTGAATTT+TGG | - | chr1.2:12051554-12051573 | MS.gene54540:CDS | 40.0% |
! | ACAAGGGCAGTGTGAATTTT+GGG | - | chr1.2:12051555-12051574 | MS.gene54540:CDS | 40.0% |
! | ACCATCACCAACAACTGTTT+TGG | - | chr1.2:12051475-12051494 | MS.gene54540:CDS | 40.0% |
! | GGTGGAAGAGAAAGTTTTTG+TGG | + | chr1.2:12051233-12051252 | None:intergenic | 40.0% |
! | GTCTTTTACGACGTCGTATA+GGG | - | chr1.2:12051523-12051542 | MS.gene54540:CDS | 40.0% |
! | TAGGTTGTTGTCTTTGGAGA+GGG | - | chr1.2:12051430-12051449 | MS.gene54540:CDS | 40.0% |
! | TCCAAAACAGTTGTTGGTGA+TGG | + | chr1.2:12051479-12051498 | None:intergenic | 40.0% |
! | TGTCTTTTACGACGTCGTAT+AGG | - | chr1.2:12051522-12051541 | MS.gene54540:CDS | 40.0% |
!! | AATTTTGGGTCTAGTAGGTG+GGG | - | chr1.2:12051569-12051588 | MS.gene54540:CDS | 40.0% |
!! | GAATTTTGGGTCTAGTAGGT+GGG | - | chr1.2:12051568-12051587 | MS.gene54540:CDS | 40.0% |
!! | GTGTGAATTTTGGGTCTAGT+AGG | - | chr1.2:12051564-12051583 | MS.gene54540:CDS | 40.0% |
!! | TCACCAACAACTGTTTTGGA+AGG | - | chr1.2:12051479-12051498 | MS.gene54540:CDS | 40.0% |
!! | TGAATTTTGGGTCTAGTAGG+TGG | - | chr1.2:12051567-12051586 | MS.gene54540:CDS | 40.0% |
!! | TTCAAGTTGGAGTGTTGATG+GGG | - | chr1.2:12051640-12051659 | MS.gene54540:CDS | 40.0% |
AAACACGGTCGTGATAACAC+TGG | + | chr1.2:12051254-12051273 | None:intergenic | 45.0% | |
ATCGATACCGTTTAAGTGGG+AGG | - | chr1.2:12051316-12051335 | MS.gene54540:CDS | 45.0% | |
CCAGAGCCAAAAGAAAGAGA+AGG | - | chr1.2:12051374-12051393 | MS.gene54540:CDS | 45.0% | |
CTCTCCAAAGACAACAACCT+AGG | + | chr1.2:12051431-12051450 | None:intergenic | 45.0% | |
GGACCTTCCAAAACAGTTGT+TGG | + | chr1.2:12051485-12051504 | None:intergenic | 45.0% | |
TCCAAAGACAACAACCTAGG+AGG | + | chr1.2:12051428-12051447 | None:intergenic | 45.0% | |
TCCTCCTAGGTTGTTGTCTT+TGG | - | chr1.2:12051424-12051443 | MS.gene54540:CDS | 45.0% | |
! | ATCACGACCGTGTTTTTCGT+CGG | - | chr1.2:12051259-12051278 | MS.gene54540:CDS | 45.0% |
! | CTAGGTTGTTGTCTTTGGAG+AGG | - | chr1.2:12051429-12051448 | MS.gene54540:CDS | 45.0% |
!! | TCAAGTTGGAGTGTTGATGG+GGG | - | chr1.2:12051641-12051660 | MS.gene54540:CDS | 45.0% |
!!! | CCTTCTCTTTCTTTTGGCTC+TGG | + | chr1.2:12051377-12051396 | None:intergenic | 45.0% |
!!! | GTTTTGGAAGGTCCATACGT+TGG | - | chr1.2:12051491-12051510 | MS.gene54540:CDS | 45.0% |
AGAAGGGGAAGCTTCTCACA+TGG | - | chr1.2:12051692-12051711 | MS.gene54540:CDS | 50.0% | |
ATCGATATAGCCGTCGTTCG+CGG | + | chr1.2:12051302-12051321 | None:intergenic | 50.0% | |
GGTCGTGTATGACATGACCT+AGG | + | chr1.2:12051356-12051375 | None:intergenic | 50.0% | |
GGTGCTTCCTCCCACTTAAA+CGG | + | chr1.2:12051326-12051345 | None:intergenic | 50.0% | |
!! | GAGCTTTGGAACTTCCTCCT+AGG | - | chr1.2:12051411-12051430 | MS.gene54540:CDS | 50.0% |
!! | GAGTGTTGATGGGGGTGATA+AGG | - | chr1.2:12051649-12051668 | MS.gene54540:CDS | 50.0% |
!! | TTAAGTGGGAGGAAGCACCA+GGG | - | chr1.2:12051327-12051346 | MS.gene54540:CDS | 50.0% |
!! | TTTAAGTGGGAGGAAGCACC+AGG | - | chr1.2:12051326-12051345 | MS.gene54540:CDS | 50.0% |
CACGGTCGTGATAACACTGG+TGG | + | chr1.2:12051251-12051270 | None:intergenic | 55.0% | |
GACACTGCACGTCCAACGTA+TGG | + | chr1.2:12051506-12051525 | None:intergenic | 55.0% | |
GGTGCCTCCGACGAAAAACA+CGG | + | chr1.2:12051269-12051288 | None:intergenic | 55.0% | |
TGACATGACCTAGGCTTCCC+TGG | + | chr1.2:12051347-12051366 | None:intergenic | 55.0% | |
TTGGGTCTAGTAGGTGGGGT+GGG | - | chr1.2:12051573-12051592 | MS.gene54540:CDS | 55.0% | |
TTTGGGTCTAGTAGGTGGGG+TGG | - | chr1.2:12051572-12051591 | MS.gene54540:CDS | 55.0% | |
! | ACGACCGTGTTTTTCGTCGG+AGG | - | chr1.2:12051262-12051281 | MS.gene54540:CDS | 55.0% |
AACTCCACCACCGCGAACGA+CGG | - | chr1.2:12051289-12051308 | MS.gene54540:CDS | 60.0% | |
GATATAGCCGTCGTTCGCGG+TGG | + | chr1.2:12051299-12051318 | None:intergenic | 60.0% | |
!! | AGGAAGCACCAGGGAAGCCT+AGG | - | chr1.2:12051336-12051355 | MS.gene54540:CDS | 60.0% |
ATAGCCGTCGTTCGCGGTGG+TGG | + | chr1.2:12051296-12051315 | None:intergenic | 65.0% | |
!! | GTCGTTCGCGGTGGTGGAGT+TGG | + | chr1.2:12051290-12051309 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 12051164 | 12051730 | 12051164 | ID=MS.gene54540 |
chr1.2 | mRNA | 12051164 | 12051730 | 12051164 | ID=MS.gene54540.t1;Parent=MS.gene54540 |
chr1.2 | exon | 12051164 | 12051730 | 12051164 | ID=MS.gene54540.t1.exon1;Parent=MS.gene54540.t1 |
chr1.2 | CDS | 12051164 | 12051730 | 12051164 | ID=cds.MS.gene54540.t1;Parent=MS.gene54540.t1 |
Gene Sequence |
Protein sequence |