Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06696.t1 | XP_003602268.1 | 96.5 | 141 | 4 | 1 | 1 | 141 | 1 | 140 | 1.30E-69 | 272.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06696.t1 | G7J7F8 | 96.5 | 141 | 4 | 1 | 1 | 141 | 1 | 140 | 9.1e-70 | 272.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene059162 | MS.gene06696 | PPI |
| MS.gene057114 | MS.gene06696 | PPI |
| MS.gene06696 | MS.gene059160 | PPI |
| MS.gene06696 | MS.gene06909 | PPI |
| MS.gene013579 | MS.gene06696 | PPI |
| MS.gene059160 | MS.gene06696 | PPI |
| MS.gene057116 | MS.gene06696 | PPI |
| MS.gene06696 | MS.gene057116 | PPI |
| MS.gene06696 | MS.gene057114 | PPI |
| MS.gene06696 | MS.gene059161 | PPI |
| MS.gene06696 | MS.gene54540 | PPI |
| MS.gene06696 | MS.gene021450 | PPI |
| MS.gene06696 | MS.gene06907 | PPI |
| MS.gene06696 | MS.gene059162 | PPI |
| MS.gene06696 | MS.gene013579 | PPI |
| MS.gene06696 | MS.gene31640 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06696.t1 | MTR_3g091680 | 95.775 | 142 | 5 | 1 | 1 | 142 | 1 | 141 | 1.70e-96 | 275 |
| MS.gene06696.t1 | MTR_1g007905 | 55.484 | 155 | 55 | 5 | 1 | 142 | 36 | 189 | 1.47e-44 | 145 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06696.t1 | AT5G53030 | 36.313 | 179 | 72 | 7 | 5 | 142 | 37 | 214 | 1.98e-17 | 75.9 |
| MS.gene06696.t1 | AT5G53030 | 35.556 | 180 | 74 | 7 | 5 | 143 | 37 | 215 | 3.44e-17 | 75.5 |
| MS.gene06696.t1 | AT4G27810 | 35.762 | 151 | 72 | 5 | 5 | 143 | 33 | 170 | 4.65e-12 | 61.2 |
Find 51 sgRNAs with CRISPR-Local
Find 113 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAACTGGAATTCCAATTT+TGG | 0.127410 | 3.3:+76432268 | MS.gene06696:CDS |
| CTAGCAGGTGGAGTGGTTTC+AGG | 0.269736 | 3.3:+76432293 | MS.gene06696:CDS |
| CCACCTGCTAGACCCAAAAT+TGG | 0.283838 | 3.3:-76432281 | None:intergenic |
| TCACCTACAACTGTGTTAGA+TGG | 0.315146 | 3.3:+76432193 | MS.gene06696:CDS |
| TGGTAGTGCCTAGGCTTTCC+TGG | 0.315648 | 3.3:-76432079 | None:intergenic |
| ATAGAACTCCAAGGGAAAAC+TGG | 0.328757 | 3.3:+76432254 | MS.gene06696:CDS |
| TGGTTTCAGGAAGATTAATA+AGG | 0.332948 | 3.3:+76432306 | MS.gene06696:CDS |
| CTTGAAAGGAATTGAAATCA+TGG | 0.366715 | 3.3:-76432044 | None:intergenic |
| AAAGGGAAAATCACATTTGT+GGG | 0.419238 | 3.3:+76432411 | MS.gene06696:CDS |
| CAACCTTGGAGCTGCCTCCT+AGG | 0.435981 | 3.3:+76432134 | MS.gene06696:CDS |
| CAAAGGGAAAATCACATTTG+TGG | 0.438574 | 3.3:+76432410 | MS.gene06696:CDS |
| TAGATGGGCCTTACGTGGGC+CGG | 0.448015 | 3.3:+76432209 | MS.gene06696:CDS |
| ATTAATAAGGAAGGAGATGA+GGG | 0.450852 | 3.3:+76432319 | MS.gene06696:CDS |
| TGAAGGAACATCAACCTTGT+TGG | 0.458738 | 3.3:-76432173 | None:intergenic |
| CTGTATTGTCGAGCTCTGAT+TGG | 0.465440 | 3.3:-76432105 | None:intergenic |
| AGATGGGCCTTACGTGGGCC+GGG | 0.475085 | 3.3:+76432210 | MS.gene06696:CDS |
| GGAATTGAAATCATGGTTTG+AGG | 0.484375 | 3.3:-76432037 | None:intergenic |
| TTCAGGAAGATTAATAAGGA+AGG | 0.487183 | 3.3:+76432310 | MS.gene06696:CDS |
| GGAGGAAGTCCCATTTCAAA+GGG | 0.501251 | 3.3:+76432394 | MS.gene06696:CDS |
| TTCAAGTGGGAGGAAGCACC+AGG | 0.509624 | 3.3:+76432061 | MS.gene06696:CDS |
| GGCCCATCTAACACAGTTGT+AGG | 0.520900 | 3.3:-76432196 | None:intergenic |
| GACATGGCCCGGCCCACGTA+AGG | 0.522178 | 3.3:-76432217 | None:intergenic |
| AAGATGTCACGGGCAGCTAA+AGG | 0.525420 | 3.3:+76432373 | MS.gene06696:CDS |
| GATTGGGTGTGGTAGTGCCT+AGG | 0.526775 | 3.3:-76432088 | None:intergenic |
| GATTAATAAGGAAGGAGATG+AGG | 0.528348 | 3.3:+76432318 | MS.gene06696:CDS |
| AGGAGGAAGTCCCATTTCAA+AGG | 0.530152 | 3.3:+76432393 | MS.gene06696:CDS |
| TGTATTGTCGAGCTCTGATT+GGG | 0.531093 | 3.3:-76432104 | None:intergenic |
| CACCTACAACTGTGTTAGAT+GGG | 0.532506 | 3.3:+76432194 | MS.gene06696:CDS |
| AAGAAGTGAAGGACATGGCC+CGG | 0.535442 | 3.3:-76432228 | None:intergenic |
| GGTGCTTCCTCCCACTTGAA+AGG | 0.541875 | 3.3:-76432058 | None:intergenic |
| TGATTTCAATTCCTTTCAAG+TGG | 0.550003 | 3.3:+76432047 | MS.gene06696:CDS |
| TTCAATTCCTTTCAAGTGGG+AGG | 0.551211 | 3.3:+76432051 | MS.gene06696:CDS |
| TTTGGGTCTAGCAGGTGGAG+TGG | 0.556268 | 3.3:+76432286 | MS.gene06696:CDS |
| TGTGTTAGATGGGCCTTACG+TGG | 0.559160 | 3.3:+76432204 | MS.gene06696:CDS |
| TCAACAACCAATAATGTCAT+CGG | 0.578794 | 3.3:+76431997 | None:intergenic |
| CAATACAGTTAGAACAACCT+TGG | 0.583296 | 3.3:+76432120 | MS.gene06696:CDS |
| AGAATAAGGTGAAGATGTCA+CGG | 0.584256 | 3.3:+76432362 | MS.gene06696:CDS |
| AGGAAGCACCAGGAAAGCCT+AGG | 0.605391 | 3.3:+76432071 | MS.gene06696:CDS |
| GATTTCAATTCCTTTCAAGT+GGG | 0.605733 | 3.3:+76432048 | MS.gene06696:CDS |
| CTTCTTCCTATAGAACTCCA+AGG | 0.606398 | 3.3:+76432245 | MS.gene06696:CDS |
| TGTCGAGCTCTGATTGGGTG+TGG | 0.614054 | 3.3:-76432099 | None:intergenic |
| CATGGTTTGAGGTGGTGACA+TGG | 0.621041 | 3.3:-76432026 | None:intergenic |
| CAACCTAGGAGGCAGCTCCA+AGG | 0.625813 | 3.3:-76432137 | None:intergenic |
| GAATAAGGTGAAGATGTCAC+GGG | 0.639632 | 3.3:+76432363 | MS.gene06696:CDS |
| TCTAACACAGTTGTAGGTGA+AGG | 0.645082 | 3.3:-76432190 | None:intergenic |
| TTCTTCCTATAGAACTCCAA+GGG | 0.650470 | 3.3:+76432246 | MS.gene06696:CDS |
| ATGTCACGGGCAGCTAAAGG+AGG | 0.652563 | 3.3:+76432376 | MS.gene06696:CDS |
| GTGTTAGATGGGCCTTACGT+GGG | 0.653028 | 3.3:+76432205 | MS.gene06696:CDS |
| AGTTCTATAGGAAGAAGTGA+AGG | 0.661579 | 3.3:-76432239 | None:intergenic |
| ATTGAAATCATGGTTTGAGG+TGG | 0.684990 | 3.3:-76432034 | None:intergenic |
| ATAGGAAGAAGTGAAGGACA+TGG | 0.705802 | 3.3:-76432233 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGACTAAAAATATATTTAAT+AGG | - | chr3.3:76433136-76433155 | None:intergenic | 10.0% |
| !! | ATTAAAACTTCAAATAATTA+TGG | - | chr3.3:76433159-76433178 | None:intergenic | 10.0% |
| !! | CAAAAAATATATATAATTAG+TGG | - | chr3.3:76433097-76433116 | None:intergenic | 10.0% |
| !!! | TAATTATTTCTATATATAGT+TGG | + | chr3.3:76432826-76432845 | MS.gene06696:intron | 10.0% |
| !! | TACATATGTAATAAAATTCT+AGG | - | chr3.3:76433453-76433472 | None:intergenic | 15.0% |
| !!! | ATATATCTAGTCTTTATTAT+AGG | - | chr3.3:76432638-76432657 | None:intergenic | 15.0% |
| !!! | GATAGATTAAAATTAGTTTA+AGG | - | chr3.3:76432729-76432748 | None:intergenic | 15.0% |
| !!! | TTTTGATATTTTTTATACTC+TGG | + | chr3.3:76433424-76433443 | MS.gene06696:intron | 15.0% |
| !! | AAAAGAGAGAATGATAATTT+AGG | - | chr3.3:76432760-76432779 | None:intergenic | 20.0% |
| !! | AAAATGAAAGACAAATTTGA+TGG | + | chr3.3:76432790-76432809 | MS.gene06696:intron | 20.0% |
| !! | AAACATTAGTGAGATTAAAA+AGG | + | chr3.3:76433401-76433420 | MS.gene06696:intron | 20.0% |
| !! | AAAGAATGATGAAAAATTGT+AGG | + | chr3.3:76433788-76433807 | MS.gene06696:intron | 20.0% |
| !!! | CTAATTTTAATCTATCAAGA+TGG | + | chr3.3:76432733-76432752 | MS.gene06696:intron | 20.0% |
| !!! | TATATTTTTGAAACGATAGT+TGG | - | chr3.3:76432548-76432567 | None:intergenic | 20.0% |
| !!! | TTCATAATATGAAGTTTTGT+CGG | - | chr3.3:76433556-76433575 | None:intergenic | 20.0% |
| !!! | TTTCTTTTACTAACCATTTT+GGG | + | chr3.3:76433646-76433665 | MS.gene06696:intron | 20.0% |
| !!! | TTTTCTTTTACTAACCATTT+TGG | + | chr3.3:76433645-76433664 | MS.gene06696:intron | 20.0% |
| !!! | TTTTTTCATAATCAAACTAG+TGG | + | chr3.3:76433578-76433597 | MS.gene06696:intron | 20.0% |
| ! | ACCTAGAGTTAGAAATTAAA+TGG | - | chr3.3:76433724-76433743 | None:intergenic | 25.0% |
| ! | CCTAGAGTTAGAAATTAAAT+GGG | - | chr3.3:76433723-76433742 | None:intergenic | 25.0% |
| !! | AAAACTGGAATTCCAATTTT+GGG | + | chr3.3:76432269-76432288 | MS.gene06696:CDS | 25.0% |
| !! | AAATTAGTTTAAGGACTATC+TGG | - | chr3.3:76432720-76432739 | None:intergenic | 25.0% |
| !! | ATTTTGCTTATATTAGTGAC+CGG | + | chr3.3:76432686-76432705 | MS.gene06696:intron | 25.0% |
| !! | CTTTTGCTTATATTAGTGAT+CGG | - | chr3.3:76432577-76432596 | None:intergenic | 25.0% |
| !!! | TATATTGATGCAAAAGCATT+TGG | - | chr3.3:76432490-76432509 | None:intergenic | 25.0% |
| !!! | TCATAATATGAAGTTTTGTC+GGG | - | chr3.3:76433555-76433574 | None:intergenic | 25.0% |
| AAAGGGAAAATCACATTTGT+GGG | + | chr3.3:76432411-76432430 | MS.gene06696:CDS | 30.0% | |
| AACTAGCAATGACTAACAAA+TGG | - | chr3.3:76433353-76433372 | None:intergenic | 30.0% | |
| AACTCTAGGTAGTAAGAAAT+TGG | + | chr3.3:76433734-76433753 | MS.gene06696:intron | 30.0% | |
| ATTAATAAGGAAGGAGATGA+GGG | + | chr3.3:76432319-76432338 | MS.gene06696:CDS | 30.0% | |
| CCATAAATCCAGTCTATAAA+TGG | - | chr3.3:76432863-76432882 | None:intergenic | 30.0% | |
| CCATTTATAGACTGGATTTA+TGG | + | chr3.3:76432860-76432879 | MS.gene06696:intron | 30.0% | |
| CTTGAAAGGAATTGAAATCA+TGG | - | chr3.3:76432047-76432066 | None:intergenic | 30.0% | |
| TACCTGCTATAATATTCTGT+CGG | + | chr3.3:76433691-76433710 | MS.gene06696:intron | 30.0% | |
| TGATTTCAATTCCTTTCAAG+TGG | + | chr3.3:76432047-76432066 | MS.gene06696:CDS | 30.0% | |
| TGGTTTCAGGAAGATTAATA+AGG | + | chr3.3:76432306-76432325 | MS.gene06696:CDS | 30.0% | |
| TTATAGCAGGTAAATATGCA+TGG | - | chr3.3:76433683-76433702 | None:intergenic | 30.0% | |
| TTCAGGAAGATTAATAAGGA+AGG | + | chr3.3:76432310-76432329 | MS.gene06696:CDS | 30.0% | |
| ! | CAAGATTTAAAACCAGTGTT+TGG | - | chr3.3:76433314-76433333 | None:intergenic | 30.0% |
| ! | CCCATTTAATTTCTAACTCT+AGG | + | chr3.3:76433720-76433739 | MS.gene06696:intron | 30.0% |
| ! | GAAAACTGGAATTCCAATTT+TGG | + | chr3.3:76432268-76432287 | MS.gene06696:CDS | 30.0% |
| ! | GATTTCAATTCCTTTCAAGT+GGG | + | chr3.3:76432048-76432067 | MS.gene06696:CDS | 30.0% |
| !! | ATGTGATTTTCCCTTTGAAA+TGG | - | chr3.3:76432407-76432426 | None:intergenic | 30.0% |
| !!! | TGTGATTTTCCCTTTGAAAT+GGG | - | chr3.3:76432406-76432425 | None:intergenic | 30.0% |
| AGAATAAGGTGAAGATGTCA+CGG | + | chr3.3:76432362-76432381 | MS.gene06696:CDS | 35.0% | |
| AGTTCTATAGGAAGAAGTGA+AGG | - | chr3.3:76432242-76432261 | None:intergenic | 35.0% | |
| ATAAAAGAGTTGGAGGTCAT+AGG | - | chr3.3:76433247-76433266 | None:intergenic | 35.0% | |
| ATTGAAATCATGGTTTGAGG+TGG | - | chr3.3:76432037-76432056 | None:intergenic | 35.0% | |
| CAAAGGGAAAATCACATTTG+TGG | + | chr3.3:76432410-76432429 | MS.gene06696:CDS | 35.0% | |
| CAATACAGTTAGAACAACCT+TGG | + | chr3.3:76432120-76432139 | MS.gene06696:CDS | 35.0% | |
| CTAGGTAGTAAGAAATTGGT+AGG | + | chr3.3:76433738-76433757 | MS.gene06696:intron | 35.0% | |
| GATTAATAAGGAAGGAGATG+AGG | + | chr3.3:76432318-76432337 | MS.gene06696:CDS | 35.0% | |
| GGAATTGAAATCATGGTTTG+AGG | - | chr3.3:76432040-76432059 | None:intergenic | 35.0% | |
| TACCGACAGAATATTATAGC+AGG | - | chr3.3:76433696-76433715 | None:intergenic | 35.0% | |
| TAGTTGAGTTATCCAAACAC+TGG | + | chr3.3:76433299-76433318 | MS.gene06696:intron | 35.0% | |
| TTCTTCCTATAGAACTCCAA+GGG | + | chr3.3:76432246-76432265 | MS.gene06696:CDS | 35.0% | |
| ! | AACTCAACTAGTTTGAGACT+AGG | - | chr3.3:76433289-76433308 | None:intergenic | 35.0% |
| ! | ACTCAACTAGTTTGAGACTA+GGG | - | chr3.3:76433288-76433307 | None:intergenic | 35.0% |
| ! | TAACCATTTTGGGCTAATTG+TGG | + | chr3.3:76433656-76433675 | MS.gene06696:intron | 35.0% |
| !!! | TGAGGGTAGTTTTGACTTTT+CGG | + | chr3.3:76432336-76432355 | MS.gene06696:CDS | 35.0% |
| ATAGAACTCCAAGGGAAAAC+TGG | + | chr3.3:76432254-76432273 | MS.gene06696:CDS | 40.0% | |
| ATAGGAAGAAGTGAAGGACA+TGG | - | chr3.3:76432236-76432255 | None:intergenic | 40.0% | |
| CACCTACAACTGTGTTAGAT+GGG | + | chr3.3:76432194-76432213 | MS.gene06696:CDS | 40.0% | |
| CTTCTTCCTATAGAACTCCA+AGG | + | chr3.3:76432245-76432264 | MS.gene06696:CDS | 40.0% | |
| GAATAAGGTGAAGATGTCAC+GGG | + | chr3.3:76432363-76432382 | MS.gene06696:CDS | 40.0% | |
| GAGAGTGACCATTTATAGAC+TGG | + | chr3.3:76432852-76432871 | MS.gene06696:intron | 40.0% | |
| GCTTCCAAAAATAGCAACCT+AGG | - | chr3.3:76432154-76432173 | None:intergenic | 40.0% | |
| GTTGGAGGTCATAAAAGAGT+TGG | - | chr3.3:76433257-76433276 | None:intergenic | 40.0% | |
| TCACCTACAACTGTGTTAGA+TGG | + | chr3.3:76432193-76432212 | MS.gene06696:CDS | 40.0% | |
| TCCAAAAATAGCAACCTAGG+AGG | - | chr3.3:76432151-76432170 | None:intergenic | 40.0% | |
| TCTAACACAGTTGTAGGTGA+AGG | - | chr3.3:76432193-76432212 | None:intergenic | 40.0% | |
| TGAAGGAACATCAACCTTGT+TGG | - | chr3.3:76432176-76432195 | None:intergenic | 40.0% | |
| TTGCTTATATTAGTGACCGG+AGG | + | chr3.3:76432689-76432708 | MS.gene06696:intron | 40.0% | |
| ! | GTTTTCCCTTGGAGTTCTAT+AGG | - | chr3.3:76432254-76432273 | None:intergenic | 40.0% |
| ! | TGTATTGTCGAGCTCTGATT+GGG | - | chr3.3:76432107-76432126 | None:intergenic | 40.0% |
| ! | TTCAATTCCTTTCAAGTGGG+AGG | + | chr3.3:76432051-76432070 | MS.gene06696:CDS | 40.0% |
| ! | TTGGAATTCCAGTTTTCCCT+TGG | - | chr3.3:76432265-76432284 | None:intergenic | 40.0% |
| !! | ATTCCAATTTTGGGTCTAGC+AGG | + | chr3.3:76432278-76432297 | MS.gene06696:CDS | 40.0% |
| !!! | GAGGGTAGTTTTGACTTTTC+GGG | + | chr3.3:76432337-76432356 | MS.gene06696:CDS | 40.0% |
| !!! | GCTATTTTTGGAAGCCAACA+AGG | + | chr3.3:76432159-76432178 | MS.gene06696:CDS | 40.0% |
| !!! | TGACTTTTCGGGTCAGAATA+AGG | + | chr3.3:76432348-76432367 | MS.gene06696:CDS | 40.0% |
| ACTAGGGCTAAAAGAGTTGG+AGG | - | chr3.3:76433272-76433291 | None:intergenic | 45.0% | |
| AGGAGGAAGTCCCATTTCAA+AGG | + | chr3.3:76432393-76432412 | MS.gene06696:CDS | 45.0% | |
| GAGACTAGGGCTAAAAGAGT+TGG | - | chr3.3:76433275-76433294 | None:intergenic | 45.0% | |
| GGAGGAAGTCCCATTTCAAA+GGG | + | chr3.3:76432394-76432413 | MS.gene06696:CDS | 45.0% | |
| GGAGGTCATAAAAGAGTTGG+AGG | - | chr3.3:76433254-76433273 | None:intergenic | 45.0% | |
| GGTCCACAATTAGCCCAAAA+TGG | - | chr3.3:76433662-76433681 | None:intergenic | 45.0% | |
| ! | CTGTATTGTCGAGCTCTGAT+TGG | - | chr3.3:76432108-76432127 | None:intergenic | 45.0% |
| !!! | GCCTCCTAGGTTGCTATTTT+TGG | + | chr3.3:76432147-76432166 | MS.gene06696:CDS | 45.0% |
| !!! | AATTATATATATTTTTTGAA+AGG | + | chr3.3:76433099-76433118 | MS.gene06696:intron | 5.0% |
| AAGAAGTGAAGGACATGGCC+CGG | - | chr3.3:76432231-76432250 | None:intergenic | 50.0% | |
| AAGATGTCACGGGCAGCTAA+AGG | + | chr3.3:76432373-76432392 | MS.gene06696:CDS | 50.0% | |
| CCACCTGCTAGACCCAAAAT+TGG | - | chr3.3:76432284-76432303 | None:intergenic | 50.0% | |
| GGACTATCTGGTACTTCCTC+CGG | - | chr3.3:76432708-76432727 | None:intergenic | 50.0% | |
| GGCCCATCTAACACAGTTGT+AGG | - | chr3.3:76432199-76432218 | None:intergenic | 50.0% | |
| GTGTTAGATGGGCCTTACGT+GGG | + | chr3.3:76432205-76432224 | MS.gene06696:CDS | 50.0% | |
| TGTGTTAGATGGGCCTTACG+TGG | + | chr3.3:76432204-76432223 | MS.gene06696:CDS | 50.0% | |
| ! | CATGGTTTGAGGTGGTGACA+TGG | - | chr3.3:76432029-76432048 | None:intergenic | 50.0% |
| !! | CCAATTTTGGGTCTAGCAGG+TGG | + | chr3.3:76432281-76432300 | MS.gene06696:CDS | 50.0% |
| ATGTCACGGGCAGCTAAAGG+AGG | + | chr3.3:76432376-76432395 | MS.gene06696:CDS | 55.0% | |
| CTAGCAGGTGGAGTGGTTTC+AGG | + | chr3.3:76432293-76432312 | MS.gene06696:CDS | 55.0% | |
| GGTGCTTCCTCCCACTTGAA+AGG | - | chr3.3:76432061-76432080 | None:intergenic | 55.0% | |
| TTTGGGTCTAGCAGGTGGAG+TGG | + | chr3.3:76432286-76432305 | MS.gene06696:CDS | 55.0% | |
| ! | GATTGGGTGTGGTAGTGCCT+AGG | - | chr3.3:76432091-76432110 | None:intergenic | 55.0% |
| ! | TGGTAGTGCCTAGGCTTTCC+TGG | - | chr3.3:76432082-76432101 | None:intergenic | 55.0% |
| ! | TGTCGAGCTCTGATTGGGTG+TGG | - | chr3.3:76432102-76432121 | None:intergenic | 55.0% |
| !! | AGGAAGCACCAGGAAAGCCT+AGG | + | chr3.3:76432071-76432090 | MS.gene06696:CDS | 55.0% |
| !! | TTCAAGTGGGAGGAAGCACC+AGG | + | chr3.3:76432061-76432080 | MS.gene06696:CDS | 55.0% |
| CAACCTAGGAGGCAGCTCCA+AGG | - | chr3.3:76432140-76432159 | None:intergenic | 60.0% | |
| CAACCTTGGAGCTGCCTCCT+AGG | + | chr3.3:76432134-76432153 | MS.gene06696:CDS | 60.0% | |
| TAGATGGGCCTTACGTGGGC+CGG | + | chr3.3:76432209-76432228 | MS.gene06696:CDS | 60.0% | |
| AGATGGGCCTTACGTGGGCC+GGG | + | chr3.3:76432210-76432229 | MS.gene06696:CDS | 65.0% | |
| GACATGGCCCGGCCCACGTA+AGG | - | chr3.3:76432220-76432239 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 76432010 | 76433818 | 76432010 | ID=MS.gene06696 |
| chr3.3 | mRNA | 76432010 | 76433818 | 76432010 | ID=MS.gene06696.t1;Parent=MS.gene06696 |
| chr3.3 | exon | 76432010 | 76432432 | 76432010 | ID=MS.gene06696.t1.exon1;Parent=MS.gene06696.t1 |
| chr3.3 | CDS | 76432010 | 76432432 | 76432010 | ID=cds.MS.gene06696.t1;Parent=MS.gene06696.t1 |
| chr3.3 | exon | 76433810 | 76433818 | 76433810 | ID=MS.gene06696.t1.exon2;Parent=MS.gene06696.t1 |
| chr3.3 | CDS | 76433810 | 76433818 | 76433810 | ID=cds.MS.gene06696.t1;Parent=MS.gene06696.t1 |
| Gene Sequence |
| Protein sequence |
