AlfalfaGEDB | MS.gene062184

M. sativa cultivar XinJiangDaYe / MS.gene062184

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF02701.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062184.t1	KEH42885.1	95.1	267	7	5	1	266	11	272	1.50E-129	472.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062184.t1	Q43385	42.1	261	99	14	27	266	67	296	9.4e-35	148.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062184.t1	A0A072VMR5	95.1	267	7	5	1	266	11	272	1.1e-129	472.2

TFs/TRs:

Gene ID	Type	Classification
MS.gene062184.t1	TF	C2C2-Dof

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049142	MS.gene062184	0.812942	3.29E-51	-1.69E-46
MS.gene049350	MS.gene062184	0.825932	3.58E-54	-1.69E-46
MS.gene049711	MS.gene062184	0.816966	4.21E-52	-1.69E-46
MS.gene049807	MS.gene062184	0.844182	8.86E-59	-1.69E-46
MS.gene050258	MS.gene062184	0.810929	9.03E-51	-1.69E-46
MS.gene051201	MS.gene062184	0.813099	3.04E-51	-1.69E-46
MS.gene051279	MS.gene062184	0.831861	1.31E-55	-1.69E-46
MS.gene051720	MS.gene062184	0.80046	1.43E-48	-1.69E-46
MS.gene052155	MS.gene062184	-0.804501	2.10E-49	-1.69E-46
MS.gene052307	MS.gene062184	0.813298	2.75E-51	-1.69E-46
MS.gene052514	MS.gene062184	0.815294	9.95E-52	-1.69E-46
MS.gene052516	MS.gene062184	0.807204	5.67E-50	-1.69E-46
MS.gene052609	MS.gene062184	0.808877	2.50E-50	-1.69E-46
MS.gene053144	MS.gene062184	0.840508	8.33E-58	-1.69E-46
MS.gene053536	MS.gene062184	0.8134	2.61E-51	-1.69E-46
MS.gene053538	MS.gene062184	0.810331	1.22E-50	-1.69E-46
MS.gene054178	MS.gene062184	0.827647	1.39E-54	-1.69E-46
MS.gene054584	MS.gene062184	0.833414	5.41E-56	-1.69E-46
MS.gene054651	MS.gene062184	0.802683	4.99E-49	-1.69E-46
MS.gene055083	MS.gene062184	0.813006	3.18E-51	-1.69E-46
MS.gene055465	MS.gene062184	0.803209	3.89E-49	-1.69E-46
MS.gene055537	MS.gene062184	0.813488	2.50E-51	-1.69E-46
MS.gene056050	MS.gene062184	0.805519	1.28E-49	-1.69E-46
MS.gene056308	MS.gene062184	0.801261	9.79E-49	-1.69E-46
MS.gene056507	MS.gene062184	0.825835	3.77E-54	-1.69E-46
MS.gene05686	MS.gene062184	0.815065	1.12E-51	-1.69E-46
MS.gene057082	MS.gene062184	0.815425	9.30E-52	-1.69E-46
MS.gene057132	MS.gene062184	0.813404	2.60E-51	-1.69E-46
MS.gene058649	MS.gene062184	0.816373	5.72E-52	-1.69E-46
MS.gene058668	MS.gene062184	0.829347	5.42E-55	-1.69E-46
MS.gene05894	MS.gene062184	0.823171	1.60E-53	-1.69E-46
MS.gene059424	MS.gene062184	0.803201	3.90E-49	-1.69E-46
MS.gene059426	MS.gene062184	0.816386	5.68E-52	-1.69E-46
MS.gene059570	MS.gene062184	0.820015	8.57E-53	-1.69E-46
MS.gene061100	MS.gene062184	0.802552	5.31E-49	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062184.t1	MTR_1g077600	95.506	267	6	5	1	266	11	272	0.0	511
MS.gene062184.t1	MTR_1g077600	95.506	267	6	5	1	266	11	272	0.0	510
MS.gene062184.t1	MTR_3g091820	44.828	290	103	14	21	266	30	306	1.53e-59	191
MS.gene062184.t1	MTR_8g027295	44.211	285	110	14	12	266	4	269	1.89e-58	187
MS.gene062184.t1	MTR_2g093220	75.000	72	18	0	17	88	23	94	1.33e-35	129
MS.gene062184.t1	MTR_3g077750	34.000	300	136	15	16	265	41	328	3.42e-34	126
MS.gene062184.t1	MTR_4g461080	47.445	137	65	2	16	145	11	147	2.76e-33	122
MS.gene062184.t1	MTR_8g068210	66.667	72	24	0	23	94	21	92	2.76e-29	113
MS.gene062184.t1	MTR_4g063780	66.667	72	18	1	31	96	72	143	6.14e-29	112
MS.gene062184.t1	MTR_8g079060	54.444	90	36	1	19	103	14	103	7.00e-29	109
MS.gene062184.t1	MTR_3g090430	60.976	82	24	1	14	95	39	112	1.04e-28	111
MS.gene062184.t1	MTR_1g056810	57.292	96	31	2	28	115	6	99	1.04e-28	110
MS.gene062184.t1	MTR_8g015840	65.823	79	23	2	16	94	5	79	1.07e-28	108
MS.gene062184.t1	MTR_3g435480	49.524	105	49	2	36	136	138	242	1.33e-28	113
MS.gene062184.t1	MTR_2g096740	53.261	92	43	0	34	125	62	153	1.58e-28	110
MS.gene062184.t1	MTR_7g024670	74.194	62	16	0	33	94	76	137	1.68e-28	112
MS.gene062184.t1	MTR_2g096740	53.261	92	43	0	34	125	77	168	1.71e-28	110
MS.gene062184.t1	MTR_8g479350	61.972	71	27	0	29	99	63	133	6.53e-28	109
MS.gene062184.t1	MTR_2g014060	67.692	65	16	1	21	85	17	76	6.96e-28	109
MS.gene062184.t1	MTR_4g088580	59.756	82	28	1	36	112	57	138	2.61e-27	108
MS.gene062184.t1	MTR_4g022370	70.690	58	17	0	31	88	79	136	3.90e-27	108
MS.gene062184.t1	MTR_5g031440	74.074	54	14	0	31	84	40	93	3.48e-26	105
MS.gene062184.t1	MTR_4g109980	75.472	53	13	0	32	84	38	90	7.80e-26	103
MS.gene062184.t1	MTR_2g059540	78.000	50	11	0	33	82	30	79	1.24e-25	100
MS.gene062184.t1	MTR_2g013370	57.971	69	28	1	20	88	32	99	1.78e-25	102
MS.gene062184.t1	MTR_4g082060	57.971	69	29	0	18	86	106	174	1.81e-24	102
MS.gene062184.t1	MTR_2g014170	76.000	50	12	0	33	82	44	93	2.32e-24	99.8
MS.gene062184.t1	MTR_6g012450	48.913	92	44	3	28	119	130	218	3.72e-24	101
MS.gene062184.t1	MTR_7g010950	65.517	58	20	0	34	91	135	192	4.45e-24	100
MS.gene062184.t1	MTR_4g089095	66.667	57	18	1	32	88	48	103	9.63e-24	97.8
MS.gene062184.t1	MTR_4g089095	66.667	57	18	1	32	88	14	69	1.29e-23	96.7
MS.gene062184.t1	MTR_7g086780	44.248	113	53	4	14	124	83	187	1.38e-23	99.0
MS.gene062184.t1	MTR_2g016030	63.636	55	20	0	31	85	44	98	2.03e-23	93.6
MS.gene062184.t1	MTR_5g041420	56.944	72	30	1	23	94	128	198	3.55e-23	96.7
MS.gene062184.t1	MTR_8g044220	56.452	62	27	0	28	89	112	173	4.22e-23	97.8
MS.gene062184.t1	MTR_6g027450	50.000	80	35	1	12	86	62	141	1.63e-22	95.1
MS.gene062184.t1	MTR_6g027460	47.561	82	37	2	5	86	73	148	2.10e-22	95.1
MS.gene062184.t1	MTR_5g041530	55.072	69	31	0	21	89	127	195	4.09e-22	94.7
MS.gene062184.t1	MTR_5g041400	66.667	51	17	0	36	86	121	171	2.66e-20	89.4
MS.gene062184.t1	MTR_5g041380	66.667	51	17	0	36	86	129	179	4.20e-20	89.0
MS.gene062184.t1	MTR_7g059400	24.272	309	146	10	7	263	51	323	5.51e-20	88.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062184.t1	AT4G24060	37.685	337	133	13	1	266	11	341	3.78e-47	160
MS.gene062184.t1	AT3G61850	42.960	277	102	15	27	266	55	312	4.13e-47	159
MS.gene062184.t1	AT3G61850	42.960	277	102	15	27	266	67	324	5.81e-47	159
MS.gene062184.t1	AT3G61850	42.692	260	99	14	27	266	55	284	6.58e-47	158
MS.gene062184.t1	AT3G61850	42.692	260	99	14	27	266	55	284	6.58e-47	158
MS.gene062184.t1	AT3G61850	42.692	260	99	14	27	266	67	296	1.10e-46	158
MS.gene062184.t1	AT2G46590	39.871	311	112	16	21	266	57	357	1.00e-38	139
MS.gene062184.t1	AT2G46590	39.871	311	112	16	21	266	69	369	1.10e-38	139
MS.gene062184.t1	AT1G64620	36.795	337	126	14	1	259	11	338	6.79e-37	134
MS.gene062184.t1	AT5G60200	52.885	104	47	1	28	129	49	152	3.40e-33	122
MS.gene062184.t1	AT1G51700	59.756	82	33	0	25	106	24	105	2.06e-31	115
MS.gene062184.t1	AT3G55370	69.118	68	21	0	31	98	73	140	3.26e-30	115
MS.gene062184.t1	AT3G55370	69.118	68	21	0	31	98	73	140	4.04e-30	115
MS.gene062184.t1	AT3G55370	59.756	82	31	1	17	98	106	185	4.11e-30	116
MS.gene062184.t1	AT4G00940	82.759	58	10	0	31	88	65	122	6.14e-30	114
MS.gene062184.t1	AT4G00940	82.759	58	10	0	31	88	65	122	6.14e-30	114
MS.gene062184.t1	AT4G00940	82.759	58	10	0	31	88	65	122	6.14e-30	114
MS.gene062184.t1	AT1G21340	43.590	156	77	5	18	165	19	171	7.71e-30	113
MS.gene062184.t1	AT2G28510	50.820	122	50	2	32	145	46	165	1.68e-29	113
MS.gene062184.t1	AT3G45610	56.322	87	36	2	18	104	25	109	1.77e-29	112
MS.gene062184.t1	AT5G65590	68.657	67	21	0	29	95	36	102	6.02e-29	112
MS.gene062184.t1	AT3G52440	75.410	61	15	0	36	96	27	87	1.35e-28	109
MS.gene062184.t1	AT3G52440	75.410	61	15	0	36	96	46	106	1.90e-28	109
MS.gene062184.t1	AT1G07640	78.182	55	12	0	34	88	21	75	7.68e-28	108
MS.gene062184.t1	AT4G38000	61.538	65	25	0	24	88	31	95	9.33e-28	107
MS.gene062184.t1	AT1G07640	78.182	55	12	0	34	88	77	131	9.34e-28	109
MS.gene062184.t1	AT2G37590	70.000	60	18	0	31	90	86	145	9.57e-28	109
MS.gene062184.t1	AT1G07640	78.182	55	12	0	34	88	85	139	1.24e-27	108
MS.gene062184.t1	AT5G60850	58.108	74	31	0	32	105	49	122	1.47e-27	108
MS.gene062184.t1	AT3G21270	73.684	57	15	0	34	90	29	85	1.97e-27	105
MS.gene062184.t1	AT1G28310	48.624	109	56	0	34	142	27	135	2.20e-27	107
MS.gene062184.t1	AT3G50410	61.429	70	27	0	19	88	15	84	2.48e-27	106
MS.gene062184.t1	AT5G66940	65.152	66	23	0	30	95	28	93	2.75e-27	105
MS.gene062184.t1	AT1G28310	48.624	109	56	0	34	142	51	159	3.36e-27	107
MS.gene062184.t1	AT2G28810	67.213	61	20	0	25	85	68	128	8.15e-27	106
MS.gene062184.t1	AT2G28810	67.213	61	20	0	25	85	85	145	1.24e-26	106
MS.gene062184.t1	AT5G02460	54.430	79	34	1	10	88	73	149	7.35e-26	105
MS.gene062184.t1	AT5G62940	72.131	61	14	1	24	84	66	123	9.61e-26	104
MS.gene062184.t1	AT1G47655	61.538	65	25	0	19	83	14	78	1.23e-25	100
MS.gene062184.t1	AT4G21050	68.333	60	19	0	36	95	26	85	1.62e-24	97.8
MS.gene062184.t1	AT2G34140	49.398	83	38	1	4	86	32	110	2.18e-24	96.3
MS.gene062184.t1	AT1G69570	60.526	76	26	1	18	93	120	191	3.03e-24	100
MS.gene062184.t1	AT1G29160	50.667	75	37	0	13	87	41	115	7.78e-24	95.1
MS.gene062184.t1	AT5G62430	53.947	76	31	1	14	89	38	109	9.39e-24	97.8
MS.gene062184.t1	AT5G39660	43.878	98	51	1	28	125	132	225	1.13e-23	99.8
MS.gene062184.t1	AT5G39660	43.878	98	51	1	28	125	132	225	1.13e-23	99.8
MS.gene062184.t1	AT5G39660	43.878	98	51	1	28	125	132	225	1.13e-23	99.8
MS.gene062184.t1	AT3G47500	63.793	58	21	0	34	91	110	167	2.79e-23	98.6
MS.gene062184.t1	AT1G26790	54.545	77	31	1	10	86	91	163	8.59e-23	96.3
MS.gene062184.t1	AT4G21040	75.510	49	12	0	36	84	27	75	1.00e-22	93.6
MS.gene062184.t1	AT4G21080	75.510	49	12	0	36	84	27	75	5.42e-22	92.0
MS.gene062184.t1	AT4G21030	53.333	60	28	0	36	95	23	82	1.66e-13	67.8

Find 61 sgRNAs with CRISPR-Local

Find 68 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACAATATTGCCTTCTATTAA+TGG	0.125175	1.1:-58088134	None:intergenic
GAAGGCCAAGATCTAAATTT+AGG	0.134252	1.1:+58088485	MS.gene062184:CDS
CTTCTTCATGATGGATCTTA+TGG	0.177246	1.1:-58088466	None:intergenic
CATGATGGATCTTATGGTTT+TGG	0.189658	1.1:-58088460	None:intergenic
GCTTCTTGTTTCTGTTGTTT+TGG	0.223578	1.1:-58088200	None:intergenic
CCCTCACATATCTGATCATT+TGG	0.252769	1.1:+58088511	MS.gene062184:CDS
TGACGGATTTGAAACAAAAT+TGG	0.261701	1.1:-58088408	None:intergenic
TAACCCAACAATATTGGATT+TGG	0.276934	1.1:+58088817	MS.gene062184:CDS
TACAAATAACCCAACAATAT+TGG	0.279491	1.1:+58088811	MS.gene062184:CDS
TTCCTGTTGGTGGTGGTTCT+AGG	0.290051	1.1:+58088354	MS.gene062184:CDS
CCAATGAATTTCTGTTTAGA+TGG	0.293399	1.1:+58088683	MS.gene062184:CDS
TTCATGCCTGCTCAAGTTCA+AGG	0.318142	1.1:+58088626	MS.gene062184:CDS
AAGGATATTCAACAGGGATT+TGG	0.319140	1.1:+58088867	MS.gene062184:CDS
TTCTTCTACTTCTTCAGCAT+TGG	0.346624	1.1:+58088556	MS.gene062184:CDS
TTTGGATCAGAATAATAATA+AGG	0.356949	1.1:+58088835	MS.gene062184:CDS
GGAACCCTAAATTTAGATCT+TGG	0.357337	1.1:-58088490	None:intergenic
AAGGCCAAGATCTAAATTTA+GGG	0.366987	1.1:+58088486	MS.gene062184:CDS
GATCAACAAGGATATTCAAC+AGG	0.388223	1.1:+58088860	MS.gene062184:CDS
TTTGGCTTCCTTTCCAACAT+AGG	0.393371	1.1:-58088182	None:intergenic
GATCCAAATCCAATATTGTT+GGG	0.402423	1.1:-58088820	None:intergenic
GCAAAACATGTAGAAGGTAT+TGG	0.410442	1.1:+58088306	MS.gene062184:CDS
GATCTTGGCCTTCTTCATGA+TGG	0.411783	1.1:-58088475	None:intergenic
CAGGTTTGAGTTCAAGTTCA+AGG	0.413495	1.1:+58088591	MS.gene062184:CDS
TTCTGTTTAGATGGGATCTC+AGG	0.420885	1.1:+58088692	MS.gene062184:CDS
ACCAACAGGAATGTTTCTAA+TGG	0.426405	1.1:-58088342	None:intergenic
GGGATTTGGACTGGAATGTT+GGG	0.441281	1.1:+58088881	MS.gene062184:CDS
CCTGCTCAAGTTCAAGGTTG+TGG	0.443611	1.1:+58088632	MS.gene062184:CDS
TTCCTAGAACCACCACCAAC+AGG	0.444902	1.1:-58088356	None:intergenic
CCATCTAAACAGAAATTCAT+TGG	0.447886	1.1:-58088683	None:intergenic
ACTGGAATGTTGGGAGGAGG+AGG	0.456613	1.1:+58088890	MS.gene062184:CDS
ATTTCTGCAAAACATGTAGA+AGG	0.460389	1.1:+58088300	MS.gene062184:CDS
GCATTGGAGCTTCTTACTGC+AGG	0.462786	1.1:+58088572	MS.gene062184:CDS
TGATCCAAATCCAATATTGT+TGG	0.463007	1.1:-58088821	None:intergenic
AGGGATTTGGACTGGAATGT+TGG	0.470831	1.1:+58088880	MS.gene062184:CDS
CAATGAATTTCTGTTTAGAT+GGG	0.475119	1.1:+58088684	MS.gene062184:CDS
TGGACTGGAATGTTGGGAGG+AGG	0.475312	1.1:+58088887	MS.gene062184:CDS
GGAATGTTGGGAGGAGGAGG+AGG	0.484270	1.1:+58088893	MS.gene062184:CDS
ACATGTTTCAAATCCTCAAA+AGG	0.498889	1.1:-58088782	None:intergenic
CATAAGATCCATCATGAAGA+AGG	0.500791	1.1:+58088467	MS.gene062184:CDS
AGAAACATTCCTGTTGGTGG+TGG	0.512070	1.1:+58088347	MS.gene062184:CDS
AAGAGACAATTAGTGAAGGA+AGG	0.513089	1.1:+58088750	MS.gene062184:CDS
TATTCAACAGGGATTTGGAC+TGG	0.519358	1.1:+58088872	MS.gene062184:CDS
ATTAGAAACATTCCTGTTGG+TGG	0.530061	1.1:+58088344	MS.gene062184:CDS
AGAGACAATTAGTGAAGGAA+GGG	0.538775	1.1:+58088751	MS.gene062184:CDS
CCACAACCTTGAACTTGAGC+AGG	0.540402	1.1:-58088632	None:intergenic
AGGTTTGAGTTCAAGTTCAA+GGG	0.544319	1.1:+58088592	MS.gene062184:CDS
TCCATTAGAAACATTCCTGT+TGG	0.554777	1.1:+58088341	MS.gene062184:CDS
AAGAAGCAATTAACTGTCCA+AGG	0.557523	1.1:+58088216	MS.gene062184:CDS
TGTAGAAGGTATTGGACTCA+AGG	0.565800	1.1:+58088314	MS.gene062184:CDS
ATGGTGAAGCCATTAATAGA+AGG	0.568853	1.1:+58088125	MS.gene062184:CDS
TTAGATGGGATCTCAGGAAG+TGG	0.574889	1.1:+58088698	MS.gene062184:CDS
TATGCAAGTACTCTTGATCA+TGG	0.590246	1.1:+58088722	MS.gene062184:CDS
GTGTTAATTGAATTACACCT+TGG	0.593541	1.1:-58088233	None:intergenic
ATTTGGACTGGAATGTTGGG+AGG	0.599027	1.1:+58088884	MS.gene062184:CDS
ACTTGCTTAAAATCTTGCAA+AGG	0.603902	1.1:-58088659	None:intergenic
CCAAATGATCAGATATGTGA+GGG	0.610063	1.1:-58088511	None:intergenic
ACCAAATGATCAGATATGTG+AGG	0.628381	1.1:-58088512	None:intergenic
GTTCAAGAGACAATTAGTGA+AGG	0.630784	1.1:+58088746	MS.gene062184:CDS
AGAAGGTATTGGACTCAAGG+TGG	0.674278	1.1:+58088317	MS.gene062184:CDS
AATAATAAGGAAGATCAACA+AGG	0.712044	1.1:+58088848	MS.gene062184:CDS
ATCAACAAGGATATTCAACA+GGG	0.718207	1.1:+58088861	MS.gene062184:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTGGATCAGAATAATAATA+AGG	+	chr1.1:58088835-58088854	MS.gene062184:CDS	20.0%
!	AATAATAAGGAAGATCAACA+AGG	+	chr1.1:58088848-58088867	MS.gene062184:CDS	25.0%
!	ACAATATTGCCTTCTATTAA+TGG	-	chr1.1:58088137-58088156	None:intergenic	25.0%
!	CAATGAATTTCTGTTTAGAT+GGG	+	chr1.1:58088684-58088703	MS.gene062184:CDS	25.0%
!	TACAAATAACCCAACAATAT+TGG	+	chr1.1:58088811-58088830	MS.gene062184:CDS	25.0%
!!!	TCAAGTATGTTTTTTGTTGA+AGG	-	chr1.1:58088434-58088453	None:intergenic	25.0%
	AAGGCCAAGATCTAAATTTA+GGG	+	chr1.1:58088486-58088505	MS.gene062184:CDS	30.0%
	ACATGTTTCAAATCCTCAAA+AGG	-	chr1.1:58088785-58088804	None:intergenic	30.0%
	ACTTGCTTAAAATCTTGCAA+AGG	-	chr1.1:58088662-58088681	None:intergenic	30.0%
	ATCAACAAGGATATTCAACA+GGG	+	chr1.1:58088861-58088880	MS.gene062184:CDS	30.0%
	ATTTCTGCAAAACATGTAGA+AGG	+	chr1.1:58088300-58088319	MS.gene062184:CDS	30.0%
	CCAATGAATTTCTGTTTAGA+TGG	+	chr1.1:58088683-58088702	MS.gene062184:CDS	30.0%
	CCATCTAAACAGAAATTCAT+TGG	-	chr1.1:58088686-58088705	None:intergenic	30.0%
	GATCCAAATCCAATATTGTT+GGG	-	chr1.1:58088823-58088842	None:intergenic	30.0%
	GTGTTAATTGAATTACACCT+TGG	-	chr1.1:58088236-58088255	None:intergenic	30.0%
	TAACCCAACAATATTGGATT+TGG	+	chr1.1:58088817-58088836	MS.gene062184:CDS	30.0%
	TACATGTGAAAAACCTATGT+TGG	+	chr1.1:58088169-58088188	MS.gene062184:CDS	30.0%
	TGATCCAAATCCAATATTGT+TGG	-	chr1.1:58088824-58088843	None:intergenic	30.0%
!	CATGTTTTGCAGAAATATCT+TGG	-	chr1.1:58088296-58088315	None:intergenic	30.0%
!!	TGACGGATTTGAAACAAAAT+TGG	-	chr1.1:58088411-58088430	None:intergenic	30.0%
!!!	ATGTTTTTTGTTGAAGGTGA+CGG	-	chr1.1:58088428-58088447	None:intergenic	30.0%
	AAGAAGCAATTAACTGTCCA+AGG	+	chr1.1:58088216-58088235	MS.gene062184:CDS	35.0%
	AAGAGACAATTAGTGAAGGA+AGG	+	chr1.1:58088750-58088769	MS.gene062184:CDS	35.0%
	AAGGATATTCAACAGGGATT+TGG	+	chr1.1:58088867-58088886	MS.gene062184:CDS	35.0%
	ACCAAATGATCAGATATGTG+AGG	-	chr1.1:58088515-58088534	None:intergenic	35.0%
	AGAGACAATTAGTGAAGGAA+GGG	+	chr1.1:58088751-58088770	MS.gene062184:CDS	35.0%
	ATGGTGAAGCCATTAATAGA+AGG	+	chr1.1:58088125-58088144	MS.gene062184:CDS	35.0%
	ATTAGAAACATTCCTGTTGG+TGG	+	chr1.1:58088344-58088363	MS.gene062184:CDS	35.0%
	CATAAGATCCATCATGAAGA+AGG	+	chr1.1:58088467-58088486	MS.gene062184:CDS	35.0%
	CCAAATGATCAGATATGTGA+GGG	-	chr1.1:58088514-58088533	None:intergenic	35.0%
	GAAGGCCAAGATCTAAATTT+AGG	+	chr1.1:58088485-58088504	MS.gene062184:CDS	35.0%
	GATCAACAAGGATATTCAAC+AGG	+	chr1.1:58088860-58088879	MS.gene062184:CDS	35.0%
	GGAACCCTAAATTTAGATCT+TGG	-	chr1.1:58088493-58088512	None:intergenic	35.0%
	GTGAAAAACCTATGTTGGAA+AGG	+	chr1.1:58088174-58088193	MS.gene062184:CDS	35.0%
	GTTCAAGAGACAATTAGTGA+AGG	+	chr1.1:58088746-58088765	MS.gene062184:CDS	35.0%
	TATGCAAGTACTCTTGATCA+TGG	+	chr1.1:58088722-58088741	MS.gene062184:CDS	35.0%
	TCCATTAGAAACATTCCTGT+TGG	+	chr1.1:58088341-58088360	MS.gene062184:CDS	35.0%
	TTCTTCTACTTCTTCAGCAT+TGG	+	chr1.1:58088556-58088575	MS.gene062184:CDS	35.0%
!	ACCAACAGGAATGTTTCTAA+TGG	-	chr1.1:58088345-58088364	None:intergenic	35.0%
!	AGGTTTGAGTTCAAGTTCAA+GGG	+	chr1.1:58088592-58088611	MS.gene062184:CDS	35.0%
!	GCAAAACATGTAGAAGGTAT+TGG	+	chr1.1:58088306-58088325	MS.gene062184:CDS	35.0%
!!	CTTCTTCATGATGGATCTTA+TGG	-	chr1.1:58088469-58088488	None:intergenic	35.0%
!!!	AAGGGTTTTGTTTCCTTTTG+AGG	+	chr1.1:58088769-58088788	MS.gene062184:CDS	35.0%
!!!	CATGATGGATCTTATGGTTT+TGG	-	chr1.1:58088463-58088482	None:intergenic	35.0%
!!!	GCTTCTTGTTTCTGTTGTTT+TGG	-	chr1.1:58088203-58088222	None:intergenic	35.0%
	CCCTCACATATCTGATCATT+TGG	+	chr1.1:58088511-58088530	MS.gene062184:CDS	40.0%
	TATTCAACAGGGATTTGGAC+TGG	+	chr1.1:58088872-58088891	MS.gene062184:CDS	40.0%
	TTCTGTTTAGATGGGATCTC+AGG	+	chr1.1:58088692-58088711	MS.gene062184:CDS	40.0%
!	CAGGTTTGAGTTCAAGTTCA+AGG	+	chr1.1:58088591-58088610	MS.gene062184:CDS	40.0%
!	TTTGGCTTCCTTTCCAACAT+AGG	-	chr1.1:58088185-58088204	None:intergenic	40.0%
!!	TGTAGAAGGTATTGGACTCA+AGG	+	chr1.1:58088314-58088333	MS.gene062184:CDS	40.0%
	TTAGATGGGATCTCAGGAAG+TGG	+	chr1.1:58088698-58088717	MS.gene062184:CDS	45.0%
	TTCATGCCTGCTCAAGTTCA+AGG	+	chr1.1:58088626-58088645	MS.gene062184:CDS	45.0%
!	AGAAACATTCCTGTTGGTGG+TGG	+	chr1.1:58088347-58088366	MS.gene062184:CDS	45.0%
!	AGGGATTTGGACTGGAATGT+TGG	+	chr1.1:58088880-58088899	MS.gene062184:CDS	45.0%
!	ATTTGGACTGGAATGTTGGG+AGG	+	chr1.1:58088884-58088903	MS.gene062184:CDS	45.0%
!	GATCTTGGCCTTCTTCATGA+TGG	-	chr1.1:58088478-58088497	None:intergenic	45.0%
!	GGGATTTGGACTGGAATGTT+GGG	+	chr1.1:58088881-58088900	MS.gene062184:CDS	45.0%
!!	AGAAGGTATTGGACTCAAGG+TGG	+	chr1.1:58088317-58088336	MS.gene062184:CDS	45.0%
	CCACAACCTTGAACTTGAGC+AGG	-	chr1.1:58088635-58088654	None:intergenic	50.0%
	CCTGCTCAAGTTCAAGGTTG+TGG	+	chr1.1:58088632-58088651	MS.gene062184:CDS	50.0%
	GCATTGGAGCTTCTTACTGC+AGG	+	chr1.1:58088572-58088591	MS.gene062184:CDS	50.0%
	TTCCTAGAACCACCACCAAC+AGG	-	chr1.1:58088359-58088378	None:intergenic	50.0%
!!	TTCCTGTTGGTGGTGGTTCT+AGG	+	chr1.1:58088354-58088373	MS.gene062184:CDS	50.0%
	ACTGGAATGTTGGGAGGAGG+AGG	+	chr1.1:58088890-58088909	MS.gene062184:CDS	55.0%
!	TGGACTGGAATGTTGGGAGG+AGG	+	chr1.1:58088887-58088906	MS.gene062184:CDS	55.0%
	GGAATGTTGGGAGGAGGAGG+AGG	+	chr1.1:58088893-58088912	MS.gene062184:CDS	60.0%
	TGGGAGGAGGAGGAGGATCA+TGG	+	chr1.1:58088900-58088919	MS.gene062184:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.1	gene	58088125	58088925	58088125	ID=MS.gene062184
chr1.1	mRNA	58088125	58088925	58088125	ID=MS.gene062184.t1;Parent=MS.gene062184
chr1.1	exon	58088125	58088925	58088125	ID=MS.gene062184.t1.exon1;Parent=MS.gene062184.t1
chr1.1	CDS	58088125	58088925	58088125	ID=cds.MS.gene062184.t1;Parent=MS.gene062184.t1

Gene Sequence

>MS.gene062184

ATGGTGAAGCCATTAATAGAAGGCAATATTGTAGTAGCAACAAATACATGTGAAAAACCTATGTTGGAAAGGAAGCCAAAACAACAGAAACAAGAAGCAATTAACTGTCCAAGGTGTAATTCAATTAACACAAAATTCTGTTACTACAACAACTATAGTTTGACACAACCAAGATATTTCTGCAAAACATGTAGAAGGTATTGGACTCAAGGTGGATCCATTAGAAACATTCCTGTTGGTGGTGGTTCTAGGAAAAACAACAAAAATAGATCTTCTAATTCTTCCAATTTTGTTTCAAATCCGTCACCTTCAACAAAAAACATACTTGATGAAAACCAAAACCATAAGATCCATCATGAAGAAGGCCAAGATCTAAATTTAGGGTTCCCTCACATATCTGATCATTTGGTTCAGCAAAATAACAACACTTCTTCTTCTACTTCTTCAGCATTGGAGCTTCTTACTGCAGGTTTGAGTTCAAGTTCAAGGGATTTGCATTCTTTCATGCCTGCTCAAGTTCAAGGTTGTGGATTTCCTTTGCAAGATTTTAAGCAAGTGCCAATGAATTTCTGTTTAGATGGGATCTCAGGAAGTGGTTATGCAAGTACTCTTGATCATGGTGTTCAAGAGACAATTAGTGAAGGAAGGGTTTTGTTTCCTTTTGAGGATTTGAAACATGTTTCTAGTACAAATAACCCAACAATATTGGATTTGGATCAGAATAATAATAAGGAAGATCAACAAGGATATTCAACAGGGATTTGGACTGGAATGTTGGGAGGAGGAGGAGGATCATGGTAA

Protein sequence

>MS.gene062184.t1

MVKPLIEGNIVVATNTCEKPMLERKPKQQKQEAINCPRCNSINTKFCYYNNYSLTQPRYFCKTCRRYWTQGGSIRNIPVGGGSRKNNKNRSSNSSNFVSNPSPSTKNILDENQNHKIHHEEGQDLNLGFPHISDHLVQQNNNTSSSTSSALELLTAGLSSSSRDLHSFMPAQVQGCGFPLQDFKQVPMNFCLDGISGSGYASTLDHGVQETISEGRVLFPFEDLKHVSSTNNPTILDLDQNNNKEDQQGYSTGIWTGMLGGGGGSW