Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06266.t1 | XP_003602749.1 | 90.1 | 516 | 50 | 1 | 2 | 517 | 3 | 517 | 1.20E-258 | 902.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06266.t1 | G7J399 | 90.1 | 516 | 50 | 1 | 2 | 517 | 3 | 517 | 8.5e-259 | 902.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene06266 | 0.820535 | 6.52E-53 | -1.69E-46 |
| MS.gene049983 | MS.gene06266 | 0.816212 | 6.21E-52 | -1.69E-46 |
| MS.gene050085 | MS.gene06266 | 0.82323 | 1.55E-53 | -1.69E-46 |
| MS.gene050654 | MS.gene06266 | 0.840258 | 9.69E-58 | -1.69E-46 |
| MS.gene050941 | MS.gene06266 | 0.804539 | 2.06E-49 | -1.69E-46 |
| MS.gene051003 | MS.gene06266 | 0.832939 | 7.10E-56 | -1.69E-46 |
| MS.gene051343 | MS.gene06266 | 0.811613 | 6.41E-51 | -1.69E-46 |
| MS.gene051597 | MS.gene06266 | 0.828529 | 8.55E-55 | -1.69E-46 |
| MS.gene05188 | MS.gene06266 | 0.801582 | 8.41E-49 | -1.69E-46 |
| MS.gene051975 | MS.gene06266 | 0.802372 | 5.79E-49 | -1.69E-46 |
| MS.gene052342 | MS.gene06266 | 0.822232 | 2.64E-53 | -1.69E-46 |
| MS.gene052434 | MS.gene06266 | 0.801995 | 6.92E-49 | -1.69E-46 |
| MS.gene053058 | MS.gene06266 | 0.839552 | 1.48E-57 | -1.69E-46 |
| MS.gene053079 | MS.gene06266 | 0.804114 | 2.52E-49 | -1.69E-46 |
| MS.gene056181 | MS.gene06266 | 0.804401 | 2.20E-49 | -1.69E-46 |
| MS.gene056787 | MS.gene06266 | 0.825511 | 4.50E-54 | -1.69E-46 |
| MS.gene056849 | MS.gene06266 | 0.805833 | 1.10E-49 | -1.69E-46 |
| MS.gene05781 | MS.gene06266 | 0.816515 | 5.32E-52 | -1.69E-46 |
| MS.gene057890 | MS.gene06266 | -0.80571 | 1.17E-49 | -1.69E-46 |
| MS.gene058054 | MS.gene06266 | 0.806108 | 9.65E-50 | -1.69E-46 |
| MS.gene059007 | MS.gene06266 | 0.802867 | 4.58E-49 | -1.69E-46 |
| MS.gene059146 | MS.gene06266 | 0.832798 | 7.69E-56 | -1.69E-46 |
| MS.gene060296 | MS.gene06266 | 0.804098 | 2.54E-49 | -1.69E-46 |
| MS.gene060935 | MS.gene06266 | 0.80707 | 6.05E-50 | -1.69E-46 |
| MS.gene060937 | MS.gene06266 | 0.813689 | 2.25E-51 | -1.69E-46 |
| MS.gene061100 | MS.gene06266 | 0.827765 | 1.31E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06266.t1 | MTR_3g098600 | 98.256 | 516 | 8 | 1 | 2 | 517 | 3 | 517 | 0.0 | 1037 |
| MS.gene06266.t1 | MTR_8g100180 | 55.357 | 504 | 193 | 5 | 11 | 513 | 35 | 507 | 0.0 | 550 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06266.t1 | AT5G50970 | 61.373 | 510 | 174 | 8 | 7 | 515 | 24 | 511 | 0.0 | 613 |
| MS.gene06266.t1 | AT5G19920 | 56.983 | 358 | 154 | 0 | 158 | 515 | 298 | 655 | 3.09e-147 | 437 |
Find 103 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGAACTCTTGCGTATTAA+AGG | 0.118944 | 3.1:+78463962 | None:intergenic |
| CGGACAGAACTTCATGCTTT+TGG | 0.187053 | 3.1:-78460605 | MS.gene06266:CDS |
| GGTCGACTTCAACTTGTTTA+TGG | 0.210939 | 3.1:-78461639 | MS.gene06266:CDS |
| GGTGCAGACAGGAGAATATT+TGG | 0.214846 | 3.1:-78461737 | MS.gene06266:CDS |
| ACAAATTGGAATAAAATTAA+AGG | 0.221064 | 3.1:-78462105 | MS.gene06266:CDS |
| CACAAATATCAGTTACAAAT+TGG | 0.251917 | 3.1:-78462119 | MS.gene06266:CDS |
| TGGATGGATTGGTCAACTTC+TGG | 0.282759 | 3.1:-78463065 | MS.gene06266:CDS |
| TCTGCTGTCATGGGTGTTGC+TGG | 0.313002 | 3.1:-78461791 | MS.gene06266:CDS |
| CCCGATGACCGTGAAATCTT+CGG | 0.326249 | 3.1:+78465194 | None:intergenic |
| AAAAGAGCCTGTTTCCTTCC+GGG | 0.332486 | 3.1:+78462169 | None:intergenic |
| CAAATTGGAATAAAATTAAA+GGG | 0.340540 | 3.1:-78462104 | MS.gene06266:CDS |
| GTTCATACTTCTTCGGTTAG+TGG | 0.345619 | 3.1:-78465137 | MS.gene06266:CDS |
| GCTCACCAGAAAAGAGTCTT+TGG | 0.350080 | 3.1:-78460431 | MS.gene06266:CDS |
| AACTTGTTTATGGTTCAAAC+AGG | 0.350438 | 3.1:-78461629 | MS.gene06266:CDS |
| ATATAAGATATAATCTTAAC+AGG | 0.350592 | 3.1:-78460472 | MS.gene06266:CDS |
| TCTTCATTCTTCTGCTGTCA+TGG | 0.353380 | 3.1:-78461801 | MS.gene06266:CDS |
| GAAAAGAGCCTGTTTCCTTC+CGG | 0.362118 | 3.1:+78462168 | None:intergenic |
| GAACGTTCATTCCTATCAAT+TGG | 0.370380 | 3.1:+78465269 | None:intergenic |
| ACCTCGAAGACGAGCCAGTT+TGG | 0.373854 | 3.1:+78465373 | None:intergenic |
| ACAGAACACTTTACTTCATC+AGG | 0.377058 | 3.1:+78460339 | None:intergenic |
| AACTCAGATGATGATGATAA+TGG | 0.377955 | 3.1:-78465329 | MS.gene06266:CDS |
| TTGAGATGTGGTTGCTTGAT+TGG | 0.389301 | 3.1:+78463921 | None:intergenic |
| CTTGGCACCCGGAAGGAAAC+AGG | 0.393450 | 3.1:-78462176 | MS.gene06266:CDS |
| ACCGAAGATTTCACGGTCAT+CGG | 0.397677 | 3.1:-78465195 | MS.gene06266:CDS |
| AGAGGACAAGCCCCATGTTA+AGG | 0.404493 | 3.1:-78461957 | MS.gene06266:CDS |
| GTGCAGACAGGAGAATATTT+GGG | 0.405675 | 3.1:-78461736 | MS.gene06266:CDS |
| GATCGAATAGTCCAATTGAT+AGG | 0.414202 | 3.1:-78465280 | MS.gene06266:CDS |
| TTAGGAGTGTTGCAGTGCTT+TGG | 0.415635 | 3.1:-78463085 | MS.gene06266:intron |
| AAGTTGAAGTCGACCGGATT+GGG | 0.417117 | 3.1:+78461647 | None:intergenic |
| GAGGACAAGCCCCATGTTAA+GGG | 0.422318 | 3.1:-78461956 | MS.gene06266:CDS |
| GATGGTCTTTATATAACATC+TGG | 0.422463 | 3.1:-78460524 | MS.gene06266:CDS |
| GTATTAAAGGAATCAATTCC+TGG | 0.423259 | 3.1:+78463975 | None:intergenic |
| ATGTTGAAGGGAAGGATAAA+GGG | 0.424142 | 3.1:-78465079 | MS.gene06266:CDS |
| AATGTTGAAGGGAAGGATAA+AGG | 0.425677 | 3.1:-78465080 | MS.gene06266:CDS |
| CTTCATTCTTCTGCTGTCAT+GGG | 0.430235 | 3.1:-78461800 | MS.gene06266:CDS |
| CTGTTACACCGAAGATTTCA+CGG | 0.435935 | 3.1:-78465202 | MS.gene06266:CDS |
| AGATTCCTGTGCAATGGTCT+TGG | 0.436295 | 3.1:+78461821 | None:intergenic |
| GGGTGCCAAGCTATATCTTC+TGG | 0.437830 | 3.1:+78462189 | None:intergenic |
| CCGAAGATTTCACGGTCATC+GGG | 0.440560 | 3.1:-78465194 | MS.gene06266:CDS |
| TCCAAACTGGCTCGTCTTCG+AGG | 0.450756 | 3.1:-78465374 | MS.gene06266:CDS |
| TCAGTATATACTGCTGATAG+TGG | 0.456056 | 3.1:-78462147 | MS.gene06266:CDS |
| TTGCAGTGCTTTGGATGGAT+TGG | 0.459655 | 3.1:-78463076 | MS.gene06266:intron |
| CATTGATAATTCCCTTAACA+TGG | 0.467748 | 3.1:+78461945 | None:intergenic |
| CATGAGTGTCGTTCCCAATC+CGG | 0.470143 | 3.1:-78461660 | MS.gene06266:CDS |
| AAAAGATTCAGAATCCAAAC+TGG | 0.471223 | 3.1:-78465387 | MS.gene06266:CDS |
| CAAGTTGAAGTCGACCGGAT+TGG | 0.472849 | 3.1:+78461646 | None:intergenic |
| TCAGGGCATACCCTTTGGCT+TGG | 0.473021 | 3.1:+78463037 | None:intergenic |
| ATTTCACGGTCATCGGGAAA+AGG | 0.477985 | 3.1:-78465188 | MS.gene06266:CDS |
| AGCAGGATGATGAGGACAAA+TGG | 0.478363 | 3.1:-78461847 | MS.gene06266:CDS |
| ATAGATCAGCAAAATGTTGA+AGG | 0.478843 | 3.1:-78465092 | MS.gene06266:CDS |
| TTCGTCGGTTCATACTTCTT+CGG | 0.481807 | 3.1:-78465144 | MS.gene06266:CDS |
| GATGTTATATAAAGACCATC+AGG | 0.485540 | 3.1:+78460527 | None:intergenic |
| CAGCTCTGATTAATCAAGCT+TGG | 0.504969 | 3.1:-78460553 | MS.gene06266:CDS |
| TATCATCTGATCTCAACATT+GGG | 0.505917 | 3.1:-78460370 | MS.gene06266:CDS |
| TGTTGTACTTTGGCGCGAGC+AGG | 0.505943 | 3.1:-78461864 | MS.gene06266:CDS |
| ATATCATCTGATCTCAACAT+TGG | 0.509338 | 3.1:-78460371 | MS.gene06266:CDS |
| GAGTGTTGCAGTGCTTTGGA+TGG | 0.518799 | 3.1:-78463081 | MS.gene06266:intron |
| TACAAAACATGTGTCTTCCC+AGG | 0.519960 | 3.1:+78461907 | None:intergenic |
| GTGATCGTGCTGTTGTACTT+TGG | 0.520581 | 3.1:-78461874 | MS.gene06266:CDS |
| TGTTATCTGCAGGTGCAGAC+AGG | 0.527295 | 3.1:-78461748 | MS.gene06266:CDS |
| CATGTTAAGGGAATTATCAA+TGG | 0.528414 | 3.1:-78461944 | MS.gene06266:CDS |
| TTCCGAAGTAGCTGTTTCGT+CGG | 0.529083 | 3.1:-78465159 | MS.gene06266:CDS |
| TTTGGGTTTGATGTTGGTGC+AGG | 0.530165 | 3.1:-78461719 | MS.gene06266:CDS |
| GAAATCTTCGGTGTAACAGC+AGG | 0.530314 | 3.1:+78465206 | None:intergenic |
| GACGGAGATTGTTAACTTCG+CGG | 0.531658 | 3.1:+78465558 | None:intergenic |
| AAGCAGATTGTGTTATCTGC+AGG | 0.531813 | 3.1:-78461758 | MS.gene06266:CDS |
| ATATCAAATATGTGAATCAC+AGG | 0.533530 | 3.1:+78460491 | None:intergenic |
| AGAATATTTGGGTTTGATGT+TGG | 0.536408 | 3.1:-78461725 | MS.gene06266:CDS |
| ACGGAGATTGTTAACTTCGC+GGG | 0.537563 | 3.1:+78465559 | None:intergenic |
| ACATCTCAAGTCAGCACAAG+AGG | 0.537650 | 3.1:-78463907 | MS.gene06266:CDS |
| AGAACGTGTGAAATTCTTAG+AGG | 0.541392 | 3.1:-78461975 | MS.gene06266:CDS |
| TGGTATAGGCAAGACGGTGA+CGG | 0.548190 | 3.1:+78465540 | None:intergenic |
| GATGATATAGATATGAGAAG+AGG | 0.551317 | 3.1:+78460386 | None:intergenic |
| TCTTGTGCTGACTTGAGATG+TGG | 0.551926 | 3.1:+78463909 | None:intergenic |
| TTCTGGAAAGTCCAAGCCAA+AGG | 0.557141 | 3.1:-78463048 | MS.gene06266:CDS |
| TCAGCAAAATGTTGAAGGGA+AGG | 0.560402 | 3.1:-78465087 | MS.gene06266:CDS |
| ATTGATAATTCCCTTAACAT+GGG | 0.563546 | 3.1:+78461946 | None:intergenic |
| GATTATTTGATATTAGATTG+AGG | 0.569773 | 3.1:-78460628 | MS.gene06266:CDS |
| ATAAACAAGTTGAAGTCGAC+CGG | 0.571664 | 3.1:+78461641 | None:intergenic |
| GAATGAAGATTCCTGTGCAA+TGG | 0.573307 | 3.1:+78461815 | None:intergenic |
| TCTGGAAAGTCCAAGCCAAA+GGG | 0.573565 | 3.1:-78463047 | MS.gene06266:intron |
| AACCGACGAAACAGCTACTT+CGG | 0.574905 | 3.1:+78465157 | None:intergenic |
| ATACTTCTTCGGTTAGTGGA+GGG | 0.580151 | 3.1:-78465133 | MS.gene06266:CDS |
| CATACTTCTTCGGTTAGTGG+AGG | 0.581642 | 3.1:-78465134 | MS.gene06266:CDS |
| GATGGCCAGAAGATATAGCT+TGG | 0.587820 | 3.1:-78462194 | MS.gene06266:CDS |
| AAAGAGTCTTTGGAGCCTTG+TGG | 0.589884 | 3.1:-78460421 | MS.gene06266:CDS |
| TTGATAATTCCCTTAACATG+GGG | 0.594028 | 3.1:+78461947 | None:intergenic |
| AAATTGGAATAAAATTAAAG+GGG | 0.598095 | 3.1:-78462103 | MS.gene06266:intron |
| GGAAGCCAAGACCATTGCAC+AGG | 0.600850 | 3.1:-78461826 | MS.gene06266:CDS |
| TAGATCAGCAAAATGTTGAA+GGG | 0.602211 | 3.1:-78465091 | MS.gene06266:CDS |
| AATCAAGCTTGGTCTCCTGA+TGG | 0.607887 | 3.1:-78460542 | MS.gene06266:CDS |
| TTATATAACATCTGGTTCAG+CGG | 0.612784 | 3.1:-78460516 | MS.gene06266:CDS |
| GATATAGCTTGGCACCCGGA+AGG | 0.613083 | 3.1:-78462183 | MS.gene06266:CDS |
| ATATATGCAGCTTGATGATG+CGG | 0.615595 | 3.1:-78465420 | MS.gene06266:intron |
| TTGGCGCGAGCAGGATGATG+AGG | 0.619686 | 3.1:-78461855 | MS.gene06266:CDS |
| AGAAGATATAGCTTGGCACC+CGG | 0.619978 | 3.1:-78462187 | MS.gene06266:CDS |
| CAGAACACTTTACTTCATCA+GGG | 0.627232 | 3.1:+78460340 | None:intergenic |
| ACAAAACATGTGTCTTCCCA+GGG | 0.629446 | 3.1:+78461908 | None:intergenic |
| ACTTGTTTATGGTTCAAACA+GGG | 0.647131 | 3.1:-78461628 | MS.gene06266:intron |
| AGGAATAGACTGAAGCCACA+AGG | 0.650340 | 3.1:+78460406 | None:intergenic |
| GTCAGCACAAGAGGAAATTG+CGG | 0.652458 | 3.1:-78463898 | MS.gene06266:CDS |
| ATCAGTAGAGTTAAGCAGAG+AGG | 0.678641 | 3.1:+78462239 | None:intergenic |
| TATTTGATATTAGATTGAGG+CGG | 0.699704 | 3.1:-78460625 | MS.gene06266:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATGAATTAGATTATG+TGG | + | chr3.1:78463689-78463708 | None:intergenic | 15.0% |
| !! | AAAATTTAAACTTTGGATTT+AGG | - | chr3.1:78463928-78463947 | MS.gene06266:CDS | 15.0% |
| !! | AAATATGAATTAGATTATGT+GGG | + | chr3.1:78463688-78463707 | None:intergenic | 15.0% |
| !! | AAATTGGAATAAAATTAAAG+GGG | - | chr3.1:78463878-78463897 | MS.gene06266:CDS | 15.0% |
| !! | AATCAATATTATTATCAAGT+AGG | + | chr3.1:78465124-78465143 | None:intergenic | 15.0% |
| !! | AATTTAAATATTCAGAAACA+AGG | + | chr3.1:78460503-78460522 | None:intergenic | 15.0% |
| !! | ACAAATTGGAATAAAATTAA+AGG | - | chr3.1:78463876-78463895 | MS.gene06266:CDS | 15.0% |
| !! | ATAGTCAAAATACAATTAAA+TGG | + | chr3.1:78463559-78463578 | None:intergenic | 15.0% |
| !! | ATATAAGATATAATCTTAAC+AGG | - | chr3.1:78465509-78465528 | MS.gene06266:intron | 15.0% |
| !! | ATTTAAATATTCAGAAACAA+GGG | + | chr3.1:78460502-78460521 | None:intergenic | 15.0% |
| !! | ATTTATAGATTATAGGTATT+AGG | - | chr3.1:78461283-78461302 | MS.gene06266:intron | 15.0% |
| !! | CAAATTGGAATAAAATTAAA+GGG | - | chr3.1:78463877-78463896 | MS.gene06266:CDS | 15.0% |
| !! | CTGGTAATAATTTATAAAAA+TGG | - | chr3.1:78461475-78461494 | MS.gene06266:intron | 15.0% |
| !! | TAGTCAAAATACAATTAAAT+GGG | + | chr3.1:78463558-78463577 | None:intergenic | 15.0% |
| !! | TTAATTAATTTCACAAACTT+AGG | + | chr3.1:78460542-78460561 | None:intergenic | 15.0% |
| !!! | AAAGTTTAAATTTTATGTCA+GGG | + | chr3.1:78463922-78463941 | None:intergenic | 15.0% |
| !!! | ATTGGTAATAATGTAAATAA+TGG | - | chr3.1:78461122-78461141 | MS.gene06266:intron | 15.0% |
| !!! | TCTTGTTTTTTTTTGTTTTA+GGG | - | chr3.1:78464491-78464510 | MS.gene06266:intron | 15.0% |
| !!! | TTCAAATGTAAATTCTAAAA+TGG | - | chr3.1:78462435-78462454 | MS.gene06266:intron | 15.0% |
| !!! | TTTTTATTTGTCTATAGATT+AGG | - | chr3.1:78461326-78461345 | MS.gene06266:intron | 15.0% |
| !! | AATATAAGCTTAAACCAAAA+CGG | + | chr3.1:78462470-78462489 | None:intergenic | 20.0% |
| !! | AATATGATGAATCAATATCT+AGG | - | chr3.1:78462352-78462371 | MS.gene06266:intron | 20.0% |
| !! | ACTCGTTAATAATGATTAAT+AGG | - | chr3.1:78462205-78462224 | MS.gene06266:CDS | 20.0% |
| !! | ACTTGAAAAAACAAACAAAA+TGG | + | chr3.1:78463499-78463518 | None:intergenic | 20.0% |
| !! | CAATAAAAAATTTCACCATA+AGG | + | chr3.1:78464822-78464841 | None:intergenic | 20.0% |
| !! | CTGACATAAAATTTAAACTT+TGG | - | chr3.1:78463921-78463940 | MS.gene06266:CDS | 20.0% |
| !! | GACATTCATTTATAGATTAT+AGG | - | chr3.1:78461276-78461295 | MS.gene06266:intron | 20.0% |
| !! | GATTATTTGATATTAGATTG+AGG | - | chr3.1:78465353-78465372 | MS.gene06266:CDS | 20.0% |
| !! | GGTAAAATGAGAATTATAAA+AGG | + | chr3.1:78462242-78462261 | None:intergenic | 20.0% |
| !! | TGATTAAATGTAATGCATAT+GGG | - | chr3.1:78461210-78461229 | MS.gene06266:intron | 20.0% |
| !! | TGTAGAAAATAAAAGCAAAA+AGG | + | chr3.1:78464414-78464433 | None:intergenic | 20.0% |
| !! | TGTATATTTACTTGGTATAT+TGG | - | chr3.1:78461828-78461847 | MS.gene06266:CDS | 20.0% |
| !! | TTGATTAAATGTAATGCATA+TGG | - | chr3.1:78461209-78461228 | MS.gene06266:intron | 20.0% |
| !!! | ATATCTAGGCTTATAATTTT+AGG | - | chr3.1:78462366-78462385 | MS.gene06266:intron | 20.0% |
| !!! | ATTGGAAACAAAAAGAATTT+TGG | - | chr3.1:78464665-78464684 | MS.gene06266:intron | 20.0% |
| !!! | ATTTATTGACTATAGGTATT+AGG | - | chr3.1:78460952-78460971 | MS.gene06266:intron | 20.0% |
| !!! | CAAAGTTTAAATTTTATGTC+AGG | + | chr3.1:78463923-78463942 | None:intergenic | 20.0% |
| !!! | GATATTCATTTATTGACTAT+AGG | - | chr3.1:78460945-78460964 | MS.gene06266:intron | 20.0% |
| !!! | GTCTTGTTTTTTTTTGTTTT+AGG | - | chr3.1:78464490-78464509 | MS.gene06266:intron | 20.0% |
| !!! | GTTTTGTTTGGATTAATTTT+TGG | - | chr3.1:78461348-78461367 | MS.gene06266:intron | 20.0% |
| !!! | GTTTTTGAAAAATTGAAATG+TGG | - | chr3.1:78461709-78461728 | MS.gene06266:CDS | 20.0% |
| !!! | TATCTAGGCTTATAATTTTA+GGG | - | chr3.1:78462367-78462386 | MS.gene06266:intron | 20.0% |
| !!! | TCTCTATCAATTTTTATTAG+AGG | - | chr3.1:78463163-78463182 | MS.gene06266:intron | 20.0% |
| !!! | TCTTTTGTAATATATGTTTC+TGG | - | chr3.1:78462828-78462847 | MS.gene06266:intron | 20.0% |
| !!! | TGTCTTTTAATTGGAAAAAA+TGG | - | chr3.1:78464753-78464772 | MS.gene06266:intron | 20.0% |
| !!! | TTATTTTATTTCATAAACGC+TGG | - | chr3.1:78462728-78462747 | MS.gene06266:intron | 20.0% |
| !!! | TTTTTGCTTTTATTTTCTAC+AGG | - | chr3.1:78464413-78464432 | MS.gene06266:intron | 20.0% |
| !!! | TTTTTGTTTGTCTCTTTATT+AGG | - | chr3.1:78460994-78461013 | MS.gene06266:intron | 20.0% |
| ! | AAAAAATGGAATCTCTATGA+AGG | - | chr3.1:78464767-78464786 | MS.gene06266:intron | 25.0% |
| ! | AAAAATGGAATCTCTATGAA+GGG | - | chr3.1:78464768-78464787 | MS.gene06266:intron | 25.0% |
| ! | AAAGGGACAAAAAGAAAATT+TGG | - | chr3.1:78460919-78460938 | MS.gene06266:intron | 25.0% |
| ! | AAAGTATGTTCCTATCTTAA+AGG | + | chr3.1:78465186-78465205 | None:intergenic | 25.0% |
| ! | AACAATAGAGTCATTTAAAC+TGG | + | chr3.1:78461388-78461407 | None:intergenic | 25.0% |
| ! | AACTAAATAATACCCAACAA+CGG | + | chr3.1:78465289-78465308 | None:intergenic | 25.0% |
| ! | AAGAAAATAATCCAATTACC+TGG | + | chr3.1:78462149-78462168 | None:intergenic | 25.0% |
| ! | AAGCAAAAAGGTTTAACAAA+TGG | + | chr3.1:78464402-78464421 | None:intergenic | 25.0% |
| ! | ACAATAGAGTCATTTAAACT+GGG | + | chr3.1:78461387-78461406 | None:intergenic | 25.0% |
| ! | ACAATTTATATGCAATTGAC+AGG | - | chr3.1:78463982-78464001 | MS.gene06266:CDS | 25.0% |
| ! | ACATGCTTAATATATGAAGT+GGG | - | chr3.1:78463368-78463387 | MS.gene06266:intron | 25.0% |
| ! | AGATACGCTAGATATAAAAT+TGG | - | chr3.1:78463032-78463051 | MS.gene06266:intron | 25.0% |
| ! | AGATTGTTAGTTACAACTAT+AGG | - | chr3.1:78463335-78463354 | MS.gene06266:intron | 25.0% |
| ! | ATATCAAATATGTGAATCAC+AGG | + | chr3.1:78465493-78465512 | None:intergenic | 25.0% |
| ! | CAAGAACATGAATAACAAAA+GGG | + | chr3.1:78465075-78465094 | None:intergenic | 25.0% |
| ! | CACAAATATCAGTTACAAAT+TGG | - | chr3.1:78463862-78463881 | MS.gene06266:CDS | 25.0% |
| ! | CTGATGATCTACAAAATAAT+AGG | + | chr3.1:78463722-78463741 | None:intergenic | 25.0% |
| ! | CTTATAAGAACAATCTTACT+AGG | + | chr3.1:78461070-78461089 | None:intergenic | 25.0% |
| ! | GATACGCTAGATATAAAATT+GGG | - | chr3.1:78463033-78463052 | MS.gene06266:intron | 25.0% |
| ! | GATTGGTAAACTTTATAAGT+TGG | + | chr3.1:78462399-78462418 | None:intergenic | 25.0% |
| ! | GCAAGCATATTATATGATAT+GGG | + | chr3.1:78463229-78463248 | None:intergenic | 25.0% |
| ! | TACATGCTTAATATATGAAG+TGG | - | chr3.1:78463367-78463386 | MS.gene06266:intron | 25.0% |
| ! | TATAAAAGAAAGTTGTAGCT+AGG | - | chr3.1:78462621-78462640 | MS.gene06266:intron | 25.0% |
| ! | TATAGTTGTAACTAACAATC+TGG | + | chr3.1:78463336-78463355 | None:intergenic | 25.0% |
| ! | TATTTGATATTAGATTGAGG+CGG | - | chr3.1:78465356-78465375 | MS.gene06266:CDS | 25.0% |
| ! | TGCAAGCATATTATATGATA+TGG | + | chr3.1:78463230-78463249 | None:intergenic | 25.0% |
| ! | TGTTGATGTTGTATTAATGT+CGG | - | chr3.1:78461590-78461609 | MS.gene06266:intron | 25.0% |
| ! | TTCTATTCTACATTGAATTC+AGG | - | chr3.1:78465150-78465169 | MS.gene06266:CDS | 25.0% |
| !! | AGTTACTTTGTTACAACTAT+AGG | + | chr3.1:78463260-78463279 | None:intergenic | 25.0% |
| !! | ATTGATAATTCCCTTAACAT+GGG | + | chr3.1:78464038-78464057 | None:intergenic | 25.0% |
| !! | TTTTTCCAATTAAAAGACAC+AGG | + | chr3.1:78464752-78464771 | None:intergenic | 25.0% |
| !!! | ATGTAGTTGTCTTTTTTATG+CGG | - | chr3.1:78464901-78464920 | MS.gene06266:intron | 25.0% |
| !!! | CTCAGTAAGAATGTTTTTAT+AGG | - | chr3.1:78461412-78461431 | MS.gene06266:intron | 25.0% |
| !!! | TAACTACTTTTCTTTCTATC+AGG | - | chr3.1:78465311-78465330 | MS.gene06266:CDS | 25.0% |
| !!! | TCTATAGATTAGGTTTTGTT+TGG | - | chr3.1:78461336-78461355 | MS.gene06266:intron | 25.0% |
| !!! | TCTCTTTATTAGGTTTTGTT+TGG | - | chr3.1:78461004-78461023 | MS.gene06266:intron | 25.0% |
| !!! | TGGATTTAGGTTTCTTTTAT+TGG | - | chr3.1:78463941-78463960 | MS.gene06266:CDS | 25.0% |
| AAAAGATTCAGAATCCAAAC+TGG | - | chr3.1:78460594-78460613 | MS.gene06266:CDS | 30.0% | |
| AACGAATTACCTAGTTAAGT+AGG | + | chr3.1:78461529-78461548 | None:intergenic | 30.0% | |
| AAGAAATGTATGAGATGACA+CGG | + | chr3.1:78463531-78463550 | None:intergenic | 30.0% | |
| AAGAGATATTCATACAACAG+AGG | + | chr3.1:78462532-78462551 | None:intergenic | 30.0% | |
| AATATTCAGAAACAAGGGTT+TGG | + | chr3.1:78460497-78460516 | None:intergenic | 30.0% | |
| ACGAATTACCTAGTTAAGTA+GGG | + | chr3.1:78461528-78461547 | None:intergenic | 30.0% | |
| ACTTGTTTATGGTTCAAACA+GGG | - | chr3.1:78464353-78464372 | MS.gene06266:intron | 30.0% | |
| AGCATATTATATGATATGGG+AGG | + | chr3.1:78463226-78463245 | None:intergenic | 30.0% | |
| ATAACTAACCCTACTTAACT+AGG | - | chr3.1:78461517-78461536 | MS.gene06266:intron | 30.0% | |
| ATAGATCAGCAAAATGTTGA+AGG | - | chr3.1:78460889-78460908 | MS.gene06266:intron | 30.0% | |
| ATATCATCTGATCTCAACAT+TGG | - | chr3.1:78465610-78465629 | MS.gene06266:CDS | 30.0% | |
| ATGAATTAGATTATGTGGGT+GGG | + | chr3.1:78463684-78463703 | None:intergenic | 30.0% | |
| CATGTTAAGGGAATTATCAA+TGG | - | chr3.1:78464037-78464056 | MS.gene06266:intron | 30.0% | |
| CCAAGAACATGAATAACAAA+AGG | + | chr3.1:78465076-78465095 | None:intergenic | 30.0% | |
| CTAGATATAAAATTGGGAAC+GGG | - | chr3.1:78463039-78463058 | MS.gene06266:intron | 30.0% | |
| GAGGTCAAATGTTATTAACA+GGG | - | chr3.1:78462302-78462321 | MS.gene06266:intron | 30.0% | |
| GATGATATAGATATGAGAAG+AGG | + | chr3.1:78465598-78465617 | None:intergenic | 30.0% | |
| GATGGTCTTTATATAACATC+TGG | - | chr3.1:78465457-78465476 | MS.gene06266:intron | 30.0% | |
| GATGTTATATAAAGACCATC+AGG | + | chr3.1:78465457-78465476 | None:intergenic | 30.0% | |
| GCATATTATATGATATGGGA+GGG | + | chr3.1:78463225-78463244 | None:intergenic | 30.0% | |
| GCTAGATATAAAATTGGGAA+CGG | - | chr3.1:78463038-78463057 | MS.gene06266:intron | 30.0% | |
| GGAATAAAATTAAAGGGGTA+TGG | - | chr3.1:78463883-78463902 | MS.gene06266:CDS | 30.0% | |
| GTATTAAAGGAATCAATTCC+TGG | + | chr3.1:78462009-78462028 | None:intergenic | 30.0% | |
| GTTATTGTTCAAACCACTAA+AGG | + | chr3.1:78462792-78462811 | None:intergenic | 30.0% | |
| GTTTAAATTTCTGCAATCCA+TGG | + | chr3.1:78464444-78464463 | None:intergenic | 30.0% | |
| TAGATATAAAATTGGGAACG+GGG | - | chr3.1:78463040-78463059 | MS.gene06266:intron | 30.0% | |
| TAGATCAGCAAAATGTTGAA+GGG | - | chr3.1:78460890-78460909 | MS.gene06266:intron | 30.0% | |
| TATCATCTGATCTCAACATT+GGG | - | chr3.1:78465611-78465630 | MS.gene06266:CDS | 30.0% | |
| TATGAATTAGATTATGTGGG+TGG | + | chr3.1:78463685-78463704 | None:intergenic | 30.0% | |
| TCCATGTATAGAAAAGGAAA+AGG | + | chr3.1:78464862-78464881 | None:intergenic | 30.0% | |
| TGATCTACAAAATAATAGGC+AGG | + | chr3.1:78463718-78463737 | None:intergenic | 30.0% | |
| TGGCTCTTTGTATATTTACT+TGG | - | chr3.1:78461820-78461839 | MS.gene06266:CDS | 30.0% | |
| TTCTTCTGCCTTATAAACAT+GGG | - | chr3.1:78464939-78464958 | MS.gene06266:intron | 30.0% | |
| TTTCTTCTGCCTTATAAACA+TGG | - | chr3.1:78464938-78464957 | MS.gene06266:intron | 30.0% | |
| TTTGTCAAGAAAAGAGAGAT+AGG | - | chr3.1:78465204-78465223 | MS.gene06266:CDS | 30.0% | |
| ! | AACTCAGATGATGATGATAA+TGG | - | chr3.1:78460652-78460671 | MS.gene06266:intron | 30.0% |
| ! | AACTTGTTTATGGTTCAAAC+AGG | - | chr3.1:78464352-78464371 | MS.gene06266:intron | 30.0% |
| ! | AATGGAAGTTTTTACCGTTT+TGG | - | chr3.1:78462453-78462472 | MS.gene06266:intron | 30.0% |
| ! | AGAATATTTGGGTTTGATGT+TGG | - | chr3.1:78464256-78464275 | MS.gene06266:intron | 30.0% |
| ! | CATTGATAATTCCCTTAACA+TGG | + | chr3.1:78464039-78464058 | None:intergenic | 30.0% |
| ! | GAAGAAAATGACCTGATTTT+TGG | + | chr3.1:78460464-78460483 | None:intergenic | 30.0% |
| ! | TCCTTTTCCTTTTCTATACA+TGG | - | chr3.1:78464858-78464877 | MS.gene06266:intron | 30.0% |
| ! | TGAGCTTTTATAGATTGTGA+CGG | + | chr3.1:78465535-78465554 | None:intergenic | 30.0% |
| ! | TTATATAACATCTGGTTCAG+CGG | - | chr3.1:78465465-78465484 | MS.gene06266:intron | 30.0% |
| ! | TTGATAATTCCCTTAACATG+GGG | + | chr3.1:78464037-78464056 | None:intergenic | 30.0% |
| ! | TTGTTATTCATGTTCTTGGT+TGG | - | chr3.1:78465077-78465096 | MS.gene06266:CDS | 30.0% |
| ! | TTTTATTAGAGGAATACCCT+AGG | - | chr3.1:78463174-78463193 | MS.gene06266:intron | 30.0% |
| ! | TTTTGTATGCAACATCCTTA+TGG | - | chr3.1:78464804-78464823 | MS.gene06266:intron | 30.0% |
| ! | TTTTTATGCGGATGACATTT+GGG | - | chr3.1:78464913-78464932 | MS.gene06266:intron | 30.0% |
| !! | AATTGTTCTAGAGAGTTCTA+AGG | + | chr3.1:78463306-78463325 | None:intergenic | 30.0% |
| !! | ATTGTTCTAGAGAGTTCTAA+GGG | + | chr3.1:78463305-78463324 | None:intergenic | 30.0% |
| !! | TTGTTTTGCCCATGTTTATA+AGG | + | chr3.1:78464950-78464969 | None:intergenic | 30.0% |
| !!! | AATGACCTGATTTTTGGTAT+AGG | + | chr3.1:78460458-78460477 | None:intergenic | 30.0% |
| !!! | AGGCTTATAATTTTAGGGTA+TGG | - | chr3.1:78462372-78462391 | MS.gene06266:intron | 30.0% |
| !!! | CCTTTTGTTATTCATGTTCT+TGG | - | chr3.1:78465073-78465092 | MS.gene06266:CDS | 30.0% |
| !!! | GGCTTATAATTTTAGGGTAT+GGG | - | chr3.1:78462373-78462392 | MS.gene06266:intron | 30.0% |
| !!! | TCTGATCATTGCTACTTTTT+AGG | - | chr3.1:78462878-78462897 | MS.gene06266:intron | 30.0% |
| !!! | TTCTCTTTGGTTTTCATATC+CGG | - | chr3.1:78461886-78461905 | MS.gene06266:CDS | 30.0% |
| !!! | TTTTTTATGCGGATGACATT+TGG | - | chr3.1:78464912-78464931 | MS.gene06266:intron | 30.0% |
| AAAGCTTATCTGAACTGAAC+TGG | - | chr3.1:78461800-78461819 | MS.gene06266:CDS | 35.0% | |
| AACCTTGGATACTTAGATAC+AGG | + | chr3.1:78461860-78461879 | None:intergenic | 35.0% | |
| AAGTGGAAATAGGATCAACA+TGG | + | chr3.1:78465242-78465261 | None:intergenic | 35.0% | |
| AATGTTGAAGGGAAGGATAA+AGG | - | chr3.1:78460901-78460920 | MS.gene06266:intron | 35.0% | |
| ACAGGTGTGAGATAATAGAA+TGG | + | chr3.1:78464734-78464753 | None:intergenic | 35.0% | |
| ACCAATCAAGATAGAATGAG+AGG | - | chr3.1:78462412-78462431 | MS.gene06266:intron | 35.0% | |
| ACCTCTCATTCTATCTTGAT+TGG | + | chr3.1:78462416-78462435 | None:intergenic | 35.0% | |
| ACTCTCGTCCTTATATTGAA+GGG | + | chr3.1:78465019-78465038 | None:intergenic | 35.0% | |
| ACTTTCAACAAATCGCAGAA+AGG | + | chr3.1:78462183-78462202 | None:intergenic | 35.0% | |
| AGAACGTGTGAAATTCTTAG+AGG | - | chr3.1:78464006-78464025 | MS.gene06266:intron | 35.0% | |
| ATACTCTGTGAGATAAGACT+TGG | - | chr3.1:78461174-78461193 | MS.gene06266:intron | 35.0% | |
| ATGTTGAAGGGAAGGATAAA+GGG | - | chr3.1:78460902-78460921 | MS.gene06266:intron | 35.0% | |
| CAACAGTAAAAAGCCAATAC+CGG | + | chr3.1:78461908-78461927 | None:intergenic | 35.0% | |
| CAGAGAGTAGAAGTTGTTAA+AGG | + | chr3.1:78463434-78463453 | None:intergenic | 35.0% | |
| CGAGGTCAAATGTTATTAAC+AGG | - | chr3.1:78462301-78462320 | MS.gene06266:intron | 35.0% | |
| CGGCAATAGAAGAAAAATCT+TGG | + | chr3.1:78465269-78465288 | None:intergenic | 35.0% | |
| CTACAAAATAATAGGCAGGA+TGG | + | chr3.1:78463714-78463733 | None:intergenic | 35.0% | |
| CTTATCTCACAGAGTATAGT+CGG | + | chr3.1:78461171-78461190 | None:intergenic | 35.0% | |
| GAACGTTCATTCCTATCAAT+TGG | + | chr3.1:78460715-78460734 | None:intergenic | 35.0% | |
| GATCGAATAGTCCAATTGAT+AGG | - | chr3.1:78460701-78460720 | MS.gene06266:intron | 35.0% | |
| GATGAACTCTTGCGTATTAA+AGG | + | chr3.1:78462022-78462041 | None:intergenic | 35.0% | |
| GCACATTCCATGTATAGAAA+AGG | + | chr3.1:78464868-78464887 | None:intergenic | 35.0% | |
| GCTTAATATATGAAGTGGGA+GGG | - | chr3.1:78463372-78463391 | MS.gene06266:intron | 35.0% | |
| TACTCTCGTCCTTATATTGA+AGG | + | chr3.1:78465020-78465039 | None:intergenic | 35.0% | |
| TATGCCCTGATTTATCTTTC+TGG | - | chr3.1:78462957-78462976 | MS.gene06266:intron | 35.0% | |
| TCAGTATATACTGCTGATAG+TGG | - | chr3.1:78463834-78463853 | MS.gene06266:intron | 35.0% | |
| TCTTGCCTATACCAAAAATC+AGG | - | chr3.1:78460450-78460469 | MS.gene06266:CDS | 35.0% | |
| TGCTTAATATATGAAGTGGG+AGG | - | chr3.1:78463371-78463390 | MS.gene06266:intron | 35.0% | |
| TGGAATGTGCTTGAAATAGT+AGG | - | chr3.1:78464878-78464897 | MS.gene06266:intron | 35.0% | |
| TTACTGTTGTCTTTGTCTCA+AGG | - | chr3.1:78461919-78461938 | MS.gene06266:CDS | 35.0% | |
| TTTCTTCTATTGCCGTTGTT+GGG | - | chr3.1:78465274-78465293 | MS.gene06266:CDS | 35.0% | |
| ! | ATAAACAAGTTGAAGTCGAC+CGG | + | chr3.1:78464343-78464362 | None:intergenic | 35.0% |
| ! | GAAGACACATGTTTTGTAAC+TGG | - | chr3.1:78464079-78464098 | MS.gene06266:intron | 35.0% |
| ! | GAGAGTATGTTCAATTGTTG+TGG | - | chr3.1:78465033-78465052 | MS.gene06266:intron | 35.0% |
| ! | TCACACCTGTGTCTTTTAAT+TGG | - | chr3.1:78464744-78464763 | MS.gene06266:intron | 35.0% |
| ! | TTTTATGAGACGACCTTTAG+TGG | - | chr3.1:78462776-78462795 | MS.gene06266:intron | 35.0% |
| ! | TTTTCTTCTATTGCCGTTGT+TGG | - | chr3.1:78465273-78465292 | MS.gene06266:CDS | 35.0% |
| !! | ACATAGTGTGCCTTTAAGAT+AGG | - | chr3.1:78465173-78465192 | MS.gene06266:CDS | 35.0% |
| !! | AGAAAAATCTTGGTGTCAAG+TGG | + | chr3.1:78465259-78465278 | None:intergenic | 35.0% |
| !! | ATATATGCAGCTTGATGATG+CGG | - | chr3.1:78460561-78460580 | MS.gene06266:CDS | 35.0% |
| !! | CTTTGTCTCAAGGTTGATTT+TGG | - | chr3.1:78461929-78461948 | MS.gene06266:CDS | 35.0% |
| !! | TTGGTTTTCATATCCGGTAT+TGG | - | chr3.1:78461892-78461911 | MS.gene06266:CDS | 35.0% |
| !! | TTGTTCTAGAGAGTTCTAAG+GGG | + | chr3.1:78463304-78463323 | None:intergenic | 35.0% |
| !!! | GATTTTTGGTATAGGCAAGA+CGG | + | chr3.1:78460450-78460469 | None:intergenic | 35.0% |
| AAGCAGATTGTGTTATCTGC+AGG | - | chr3.1:78464223-78464242 | MS.gene06266:intron | 40.0% | |
| ACAAAACATGTGTCTTCCCA+GGG | + | chr3.1:78464076-78464095 | None:intergenic | 40.0% | |
| AGCCTGTATCTAAGTATCCA+AGG | - | chr3.1:78461855-78461874 | MS.gene06266:CDS | 40.0% | |
| ATAAATCAGGGCATACCCTT+TGG | + | chr3.1:78462952-78462971 | None:intergenic | 40.0% | |
| ATACTTCTTCGGTTAGTGGA+GGG | - | chr3.1:78460848-78460867 | MS.gene06266:intron | 40.0% | |
| ATAGTGCAAGAAACTTCACG+TGG | + | chr3.1:78464575-78464594 | None:intergenic | 40.0% | |
| ATCAGTAGAGTTAAGCAGAG+AGG | + | chr3.1:78463745-78463764 | None:intergenic | 40.0% | |
| ATTTCATAAACGCTGGCGAT+TGG | - | chr3.1:78462735-78462754 | MS.gene06266:intron | 40.0% | |
| CAAGGTTATGTGCTTCTCTT+TGG | - | chr3.1:78461873-78461892 | MS.gene06266:CDS | 40.0% | |
| CATGGGCAAAACAAATGAGA+TGG | - | chr3.1:78464956-78464975 | MS.gene06266:intron | 40.0% | |
| CCTAAACATCATGTCTACTG+AGG | + | chr3.1:78463617-78463636 | None:intergenic | 40.0% | |
| CCTCAGTAGACATGATGTTT+AGG | - | chr3.1:78463614-78463633 | MS.gene06266:intron | 40.0% | |
| CGCAAAAAGCTGATCATTAG+CGG | + | chr3.1:78462125-78462144 | None:intergenic | 40.0% | |
| CTCTCGTCCTTATATTGAAG+GGG | + | chr3.1:78465018-78465037 | None:intergenic | 40.0% | |
| CTGTTACACCGAAGATTTCA+CGG | - | chr3.1:78460779-78460798 | MS.gene06266:intron | 40.0% | |
| CTTCATTCTTCTGCTGTCAT+GGG | - | chr3.1:78464181-78464200 | MS.gene06266:intron | 40.0% | |
| CTTCTTTCCTCTATCACTGA+TGG | - | chr3.1:78463585-78463604 | MS.gene06266:intron | 40.0% | |
| GAAGAAACCATCAGTGATAG+AGG | + | chr3.1:78463595-78463614 | None:intergenic | 40.0% | |
| GAATGAAGATTCCTGTGCAA+TGG | + | chr3.1:78464169-78464188 | None:intergenic | 40.0% | |
| GCAAAAAGCTGATCATTAGC+GGG | + | chr3.1:78462124-78462143 | None:intergenic | 40.0% | |
| GGCAAAACAAATGAGATGGT+TGG | - | chr3.1:78464960-78464979 | MS.gene06266:intron | 40.0% | |
| GGCACCAGAAAGATAAATCA+GGG | + | chr3.1:78462964-78462983 | None:intergenic | 40.0% | |
| GGTGTGAGATAATAGAATGG+TGG | + | chr3.1:78464731-78464750 | None:intergenic | 40.0% | |
| GTGAGATAATAGAATGGTGG+CGG | + | chr3.1:78464728-78464747 | None:intergenic | 40.0% | |
| GTGCAGACAGGAGAATATTT+GGG | - | chr3.1:78464245-78464264 | MS.gene06266:intron | 40.0% | |
| GTTCATACTTCTTCGGTTAG+TGG | - | chr3.1:78460844-78460863 | MS.gene06266:intron | 40.0% | |
| TAAGGGGATAACTAACTGAC+AGG | + | chr3.1:78463288-78463307 | None:intergenic | 40.0% | |
| TACAAAACATGTGTCTTCCC+AGG | + | chr3.1:78464077-78464096 | None:intergenic | 40.0% | |
| TAGTGCAAGAAACTTCACGT+GGG | + | chr3.1:78464574-78464593 | None:intergenic | 40.0% | |
| TCAGAAACAAGGGTTTGGAT+TGG | + | chr3.1:78460492-78460511 | None:intergenic | 40.0% | |
| TCAGACGTCATACAAAACAC+TGG | - | chr3.1:78461456-78461475 | MS.gene06266:intron | 40.0% | |
| TCAGCAAAATGTTGAAGGGA+AGG | - | chr3.1:78460894-78460913 | MS.gene06266:intron | 40.0% | |
| TCCAGAACAAAAAGAACACC+AGG | - | chr3.1:78461988-78462007 | MS.gene06266:intron | 40.0% | |
| TCTCGTCCTTATATTGAAGG+GGG | + | chr3.1:78465017-78465036 | None:intergenic | 40.0% | |
| TCTTCATTCTTCTGCTGTCA+TGG | - | chr3.1:78464180-78464199 | MS.gene06266:intron | 40.0% | |
| TGGCACCAGAAAGATAAATC+AGG | + | chr3.1:78462965-78462984 | None:intergenic | 40.0% | |
| TTGAGATGTGGTTGCTTGAT+TGG | + | chr3.1:78462063-78462082 | None:intergenic | 40.0% | |
| ! | ATTTTCTACAGGCTTTGCCA+TGG | - | chr3.1:78464424-78464443 | MS.gene06266:intron | 40.0% |
| ! | CAAAGAGAAGCACATAACCT+TGG | + | chr3.1:78461875-78461894 | None:intergenic | 40.0% |
| ! | CAGCTCTGATTAATCAAGCT+TGG | - | chr3.1:78465428-78465447 | MS.gene06266:intron | 40.0% |
| ! | GACACATGTTTTGTAACTGG+TGG | - | chr3.1:78464082-78464101 | MS.gene06266:intron | 40.0% |
| ! | GGACAGAACTTCATGCTTTT+GGG | - | chr3.1:78465377-78465396 | MS.gene06266:CDS | 40.0% |
| ! | GGTCGACTTCAACTTGTTTA+TGG | - | chr3.1:78464342-78464361 | MS.gene06266:intron | 40.0% |
| ! | TCCTGGTGTTCTTTTTGTTC+TGG | + | chr3.1:78461992-78462011 | None:intergenic | 40.0% |
| ! | TCTTTTCATCTCCCAGCTTT+TGG | - | chr3.1:78462266-78462285 | MS.gene06266:intron | 40.0% |
| !! | AGAATAGAAGCACTCCAAAG+TGG | + | chr3.1:78462985-78463004 | None:intergenic | 40.0% |
| !! | TCTTGGTGTCAAGTGGAAAT+AGG | + | chr3.1:78465252-78465271 | None:intergenic | 40.0% |
| !! | TTATCTTTCTGGTGCCACTT+TGG | - | chr3.1:78462968-78462987 | MS.gene06266:intron | 40.0% |
| !! | TTCGTCGGTTCATACTTCTT+CGG | - | chr3.1:78460837-78460856 | MS.gene06266:intron | 40.0% |
| !!! | ATGGCATTGTTTTTATGCCC+TGG | - | chr3.1:78464056-78464075 | MS.gene06266:intron | 40.0% |
| !!! | TGGCATTGTTTTTATGCCCT+GGG | - | chr3.1:78464057-78464076 | MS.gene06266:intron | 40.0% |
| AAAAGAGCCTGTTTCCTTCC+GGG | + | chr3.1:78463815-78463834 | None:intergenic | 45.0% | |
| AACCGACGAAACAGCTACTT+CGG | + | chr3.1:78460827-78460846 | None:intergenic | 45.0% | |
| AAGCAGAAGGAGCAACCATA+GGG | + | chr3.1:78463122-78463141 | None:intergenic | 45.0% | |
| AAGTTGAAGTCGACCGGATT+GGG | + | chr3.1:78464337-78464356 | None:intergenic | 45.0% | |
| AATCAAGCTTGGTCTCCTGA+TGG | - | chr3.1:78465439-78465458 | MS.gene06266:intron | 45.0% | |
| ACATCTCAAGTCAGCACAAG+AGG | - | chr3.1:78462074-78462093 | MS.gene06266:intron | 45.0% | |
| ACCGAAGATTTCACGGTCAT+CGG | - | chr3.1:78460786-78460805 | MS.gene06266:intron | 45.0% | |
| ACGGAGATTGTTAACTTCGC+GGG | + | chr3.1:78460425-78460444 | None:intergenic | 45.0% | |
| ACTTCTACTCTCTGAATGCG+AGG | - | chr3.1:78463440-78463459 | MS.gene06266:intron | 45.0% | |
| AGAAGATATAGCTTGGCACC+CGG | - | chr3.1:78463794-78463813 | MS.gene06266:intron | 45.0% | |
| AGATTCCTGTGCAATGGTCT+TGG | + | chr3.1:78464163-78464182 | None:intergenic | 45.0% | |
| AGCAGGATGATGAGGACAAA+TGG | - | chr3.1:78464134-78464153 | MS.gene06266:intron | 45.0% | |
| AGGAATAGACTGAAGCCACA+AGG | + | chr3.1:78465578-78465597 | None:intergenic | 45.0% | |
| ATTGTGCGTCCCAAAAACAG+AGG | - | chr3.1:78463763-78463782 | MS.gene06266:intron | 45.0% | |
| ATTTCACGGTCATCGGGAAA+AGG | - | chr3.1:78460793-78460812 | MS.gene06266:intron | 45.0% | |
| CATACTTCTTCGGTTAGTGG+AGG | - | chr3.1:78460847-78460866 | MS.gene06266:intron | 45.0% | |
| CATCCACCCCCTTCAATATA+AGG | - | chr3.1:78465008-78465027 | MS.gene06266:intron | 45.0% | |
| CCACGCAACTACTGAATCAT+GGG | + | chr3.1:78464986-78465005 | None:intergenic | 45.0% | |
| GAAAAGAGCCTGTTTCCTTC+CGG | + | chr3.1:78463816-78463835 | None:intergenic | 45.0% | |
| GACGGAGATTGTTAACTTCG+CGG | + | chr3.1:78460426-78460445 | None:intergenic | 45.0% | |
| GATGGCCAGAAGATATAGCT+TGG | - | chr3.1:78463787-78463806 | MS.gene06266:intron | 45.0% | |
| GCTCACCAGAAAAGAGTCTT+TGG | - | chr3.1:78465550-78465569 | MS.gene06266:CDS | 45.0% | |
| GCTGGGAGATGAAAAGAGAA+AGG | + | chr3.1:78462263-78462282 | None:intergenic | 45.0% | |
| GGTGCAGACAGGAGAATATT+TGG | - | chr3.1:78464244-78464263 | MS.gene06266:intron | 45.0% | |
| GTCAGCACAAGAGGAAATTG+CGG | - | chr3.1:78462083-78462102 | MS.gene06266:intron | 45.0% | |
| TCTGGAAAGTCCAAGCCAAA+GGG | - | chr3.1:78462934-78462953 | MS.gene06266:intron | 45.0% | |
| TGTCGGACACTGATACATGT+CGG | - | chr3.1:78461607-78461626 | MS.gene06266:intron | 45.0% | |
| ! | ACTCTCTGAATGCGAGGTTT+TGG | - | chr3.1:78463446-78463465 | MS.gene06266:intron | 45.0% |
| ! | AGGCTCCAAAGACTCTTTTC+TGG | + | chr3.1:78465558-78465577 | None:intergenic | 45.0% |
| ! | ATGATCAGCTTTTTGCGACC+AGG | - | chr3.1:78462128-78462147 | MS.gene06266:CDS | 45.0% |
| ! | CAGAACTTCATGCTTTTGGG+TGG | - | chr3.1:78465380-78465399 | MS.gene06266:CDS | 45.0% |
| ! | CGGACAGAACTTCATGCTTT+TGG | - | chr3.1:78465376-78465395 | MS.gene06266:CDS | 45.0% |
| ! | GAAATCTTCGGTGTAACAGC+AGG | + | chr3.1:78460778-78460797 | None:intergenic | 45.0% |
| ! | GATAGAGAAGCATACTCACG+AGG | + | chr3.1:78462665-78462684 | None:intergenic | 45.0% |
| ! | GCTTTTTGCGACCAGGTAAT+TGG | - | chr3.1:78462135-78462154 | MS.gene06266:CDS | 45.0% |
| ! | GTGATCGTGCTGTTGTACTT+TGG | - | chr3.1:78464107-78464126 | MS.gene06266:intron | 45.0% |
| ! | TTCCGAAGTAGCTGTTTCGT+CGG | - | chr3.1:78460822-78460841 | MS.gene06266:intron | 45.0% |
| ! | TTCTGGAAAGTCCAAGCCAA+AGG | - | chr3.1:78462933-78462952 | MS.gene06266:intron | 45.0% |
| ! | TTGCAGTGCTTTGGATGGAT+TGG | - | chr3.1:78462905-78462924 | MS.gene06266:intron | 45.0% |
| ! | TTTGGGTTTGATGTTGGTGC+AGG | - | chr3.1:78464262-78464281 | MS.gene06266:intron | 45.0% |
| !! | AAAGAGTCTTTGGAGCCTTG+TGG | - | chr3.1:78465560-78465579 | MS.gene06266:CDS | 45.0% |
| !! | TCTTGTGCTGACTTGAGATG+TGG | + | chr3.1:78462075-78462094 | None:intergenic | 45.0% |
| !! | TGGATGGATTGGTCAACTTC+TGG | - | chr3.1:78462916-78462935 | MS.gene06266:intron | 45.0% |
| !! | TGGCCATCTCCTCTGTTTTT+GGG | + | chr3.1:78463775-78463794 | None:intergenic | 45.0% |
| !! | TTAGGAGTGTTGCAGTGCTT+TGG | - | chr3.1:78462896-78462915 | MS.gene06266:intron | 45.0% |
| !!! | AAATATATATTTTTAGAAAA+TGG | + | chr3.1:78462588-78462607 | None:intergenic | 5.0% |
| AGAGGACAAGCCCCATGTTA+AGG | - | chr3.1:78464024-78464043 | MS.gene06266:intron | 50.0% | |
| AGCTCTTGTGAGCTTGAGCT+AGG | - | chr3.1:78463403-78463422 | MS.gene06266:intron | 50.0% | |
| AGCTTTCCAAGCAGCTCTTG+CGG | + | chr3.1:78461786-78461805 | None:intergenic | 50.0% | |
| ATACAACAGAGGCCTCGCAT+AGG | + | chr3.1:78462521-78462540 | None:intergenic | 50.0% | |
| CACTGACATCAGACACGCAT+TGG | - | chr3.1:78461104-78461123 | MS.gene06266:intron | 50.0% | |
| CCCATGATTCAGTAGTTGCG+TGG | - | chr3.1:78464983-78465002 | MS.gene06266:intron | 50.0% | |
| CCCGATGACCGTGAAATCTT+CGG | + | chr3.1:78460790-78460809 | None:intergenic | 50.0% | |
| CCGAAGATTTCACGGTCATC+GGG | - | chr3.1:78460787-78460806 | MS.gene06266:intron | 50.0% | |
| CGTCCCAAAAACAGAGGAGA+TGG | - | chr3.1:78463769-78463788 | MS.gene06266:intron | 50.0% | |
| CGTCCTTATATTGAAGGGGG+TGG | + | chr3.1:78465014-78465033 | None:intergenic | 50.0% | |
| GAAGCAGAAGGAGCAACCAT+AGG | + | chr3.1:78463123-78463142 | None:intergenic | 50.0% | |
| GAGGACAAGCCCCATGTTAA+GGG | - | chr3.1:78464025-78464044 | MS.gene06266:intron | 50.0% | |
| GCCACGCAACTACTGAATCA+TGG | + | chr3.1:78464987-78465006 | None:intergenic | 50.0% | |
| GGGTGCCAAGCTATATCTTC+TGG | + | chr3.1:78463795-78463814 | None:intergenic | 50.0% | |
| GTCGGACACTGATACATGTC+GGG | - | chr3.1:78461608-78461627 | MS.gene06266:intron | 50.0% | |
| TCAGCAGAAGCAGAAGCAGA+AGG | + | chr3.1:78463135-78463154 | None:intergenic | 50.0% | |
| TGGTATAGGCAAGACGGTGA+CGG | + | chr3.1:78460444-78460463 | None:intergenic | 50.0% | |
| TGTCTGTAGCGTACTCCCTA+TGG | - | chr3.1:78463104-78463123 | MS.gene06266:intron | 50.0% | |
| TGTTATCTGCAGGTGCAGAC+AGG | - | chr3.1:78464233-78464252 | MS.gene06266:intron | 50.0% | |
| ! | CAAGTTGAAGTCGACCGGAT+TGG | + | chr3.1:78464338-78464357 | None:intergenic | 50.0% |
| ! | CATGAGTGTCGTTCCCAATC+CGG | - | chr3.1:78464321-78464340 | MS.gene06266:intron | 50.0% |
| ! | CTGGCCATCTCCTCTGTTTT+TGG | + | chr3.1:78463776-78463795 | None:intergenic | 50.0% |
| ! | GAGTGTTGCAGTGCTTTGGA+TGG | - | chr3.1:78462900-78462919 | MS.gene06266:intron | 50.0% |
| !! | CTGAATGCGAGGTTTTGGTG+TGG | - | chr3.1:78463451-78463470 | MS.gene06266:intron | 50.0% |
| ACCTCGAAGACGAGCCAGTT+TGG | + | chr3.1:78460611-78460630 | None:intergenic | 55.0% | |
| AGCTCGCATAAGCTCGACCT+AGG | + | chr3.1:78463194-78463213 | None:intergenic | 55.0% | |
| GATATAGCTTGGCACCCGGA+AGG | - | chr3.1:78463798-78463817 | MS.gene06266:intron | 55.0% | |
| GCCTTCTGCAGCCAAAAGCT+GGG | + | chr3.1:78462280-78462299 | None:intergenic | 55.0% | |
| GCTCGCATAAGCTCGACCTA+GGG | + | chr3.1:78463193-78463212 | None:intergenic | 55.0% | |
| GGAAGCCAAGACCATTGCAC+AGG | - | chr3.1:78464155-78464174 | MS.gene06266:intron | 55.0% | |
| GTTCTTCCGCAAGAGCTGCT+TGG | - | chr3.1:78461777-78461796 | MS.gene06266:CDS | 55.0% | |
| TCAGGGCATACCCTTTGGCT+TGG | + | chr3.1:78462947-78462966 | None:intergenic | 55.0% | |
| TGCCTTCTGCAGCCAAAAGC+TGG | + | chr3.1:78462281-78462300 | None:intergenic | 55.0% | |
| TGTTGTACTTTGGCGCGAGC+AGG | - | chr3.1:78464117-78464136 | MS.gene06266:intron | 55.0% | |
| ! | TCTGCTGTCATGGGTGTTGC+TGG | - | chr3.1:78464190-78464209 | MS.gene06266:intron | 55.0% |
| !! | TCCAAACTGGCTCGTCTTCG+AGG | - | chr3.1:78460607-78460626 | MS.gene06266:CDS | 55.0% |
| !! | TCCCAGCTTTTGGCTGCAGA+AGG | - | chr3.1:78462276-78462295 | MS.gene06266:intron | 55.0% |
| !! | TTTTGGCTGCAGAAGGCACG+AGG | - | chr3.1:78462283-78462302 | MS.gene06266:intron | 55.0% |
| CTTGGCACCCGGAAGGAAAC+AGG | - | chr3.1:78463805-78463824 | MS.gene06266:intron | 60.0% | |
| TTGGCGCGAGCAGGATGATG+AGG | - | chr3.1:78464126-78464145 | MS.gene06266:intron | 60.0% | |
| ! | AGGCTATGACGCACTGACGC+AGG | - | chr3.1:78461432-78461451 | MS.gene06266:intron | 60.0% |
| !! | ATGGTGGCGGTCAAGTAGCG+TGG | + | chr3.1:78464715-78464734 | None:intergenic | 60.0% |
| !! | TGGTGGCGGTCAAGTAGCGT+GGG | + | chr3.1:78464714-78464733 | None:intergenic | 60.0% |
| GCCTCGCATAGGCAGTCGTG+CGG | + | chr3.1:78462510-78462529 | None:intergenic | 65.0% | |
| TCCGCACGACTGCCTATGCG+AGG | - | chr3.1:78462506-78462525 | MS.gene06266:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 78460349 | 78465654 | 78460349 | ID=MS.gene06266 |
| chr3.1 | mRNA | 78460349 | 78465654 | 78460349 | ID=MS.gene06266.t1;Parent=MS.gene06266 |
| chr3.1 | exon | 78465532 | 78465654 | 78465532 | ID=MS.gene06266.t1.exon1;Parent=MS.gene06266.t1 |
| chr3.1 | CDS | 78465532 | 78465654 | 78465532 | ID=cds.MS.gene06266.t1;Parent=MS.gene06266.t1 |
| chr3.1 | exon | 78465063 | 78465432 | 78465063 | ID=MS.gene06266.t1.exon2;Parent=MS.gene06266.t1 |
| chr3.1 | CDS | 78465063 | 78465432 | 78465063 | ID=cds.MS.gene06266.t1;Parent=MS.gene06266.t1 |
| chr3.1 | exon | 78463854 | 78464010 | 78463854 | ID=MS.gene06266.t1.exon3;Parent=MS.gene06266.t1 |
| chr3.1 | CDS | 78463854 | 78464010 | 78463854 | ID=cds.MS.gene06266.t1;Parent=MS.gene06266.t1 |
| chr3.1 | exon | 78463048 | 78463092 | 78463048 | ID=MS.gene06266.t1.exon4;Parent=MS.gene06266.t1 |
| chr3.1 | CDS | 78463048 | 78463092 | 78463048 | ID=cds.MS.gene06266.t1;Parent=MS.gene06266.t1 |
| chr3.1 | exon | 78462104 | 78462269 | 78462104 | ID=MS.gene06266.t1.exon5;Parent=MS.gene06266.t1 |
| chr3.1 | CDS | 78462104 | 78462269 | 78462104 | ID=cds.MS.gene06266.t1;Parent=MS.gene06266.t1 |
| chr3.1 | exon | 78461629 | 78461999 | 78461629 | ID=MS.gene06266.t1.exon6;Parent=MS.gene06266.t1 |
| chr3.1 | CDS | 78461629 | 78461999 | 78461629 | ID=cds.MS.gene06266.t1;Parent=MS.gene06266.t1 |
| chr3.1 | exon | 78460349 | 78460670 | 78460349 | ID=MS.gene06266.t1.exon7;Parent=MS.gene06266.t1 |
| chr3.1 | CDS | 78460349 | 78460670 | 78460349 | ID=cds.MS.gene06266.t1;Parent=MS.gene06266.t1 |
| Gene Sequence |
| Protein sequence |
