Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062669.t1 | RHN52140.1 | 95.5 | 291 | 12 | 1 | 1 | 290 | 349 | 639 | 4.00E-161 | 577.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062669.t1 | Q9LT10 | 54.7 | 309 | 119 | 7 | 2 | 306 | 5 | 296 | 1.5e-92 | 340.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062669.t1 | G7KNV2 | 95.5 | 291 | 12 | 1 | 1 | 290 | 1 | 291 | 2.9e-161 | 577.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene062669 | MS.gene055956 | PPI |
MS.gene062669 | MS.gene52704 | PPI |
MS.gene062669 | MS.gene005657 | PPI |
MS.gene91548 | MS.gene062669 | PPI |
MS.gene018032 | MS.gene062669 | PPI |
MS.gene062669 | MS.gene07155 | PPI |
MS.gene062669 | MS.gene04666 | PPI |
MS.gene062669 | MS.gene44055 | PPI |
MS.gene062669 | MS.gene005188 | PPI |
MS.gene062669 | MS.gene52621 | PPI |
MS.gene062669 | MS.gene21543 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062669.t1 | MTR_6g065120 | 95.533 | 291 | 12 | 1 | 1 | 290 | 1 | 291 | 0.0 | 579 |
MS.gene062669.t1 | MTR_6g065370 | 76.042 | 288 | 69 | 0 | 3 | 290 | 2 | 289 | 2.48e-167 | 468 |
MS.gene062669.t1 | MTR_6g065400 | 76.042 | 288 | 69 | 0 | 3 | 290 | 2 | 289 | 8.18e-167 | 467 |
MS.gene062669.t1 | MTR_6g065270 | 76.224 | 286 | 64 | 1 | 9 | 290 | 6 | 291 | 2.34e-166 | 466 |
MS.gene062669.t1 | MTR_6g065110 | 71.331 | 293 | 84 | 0 | 1 | 293 | 1 | 293 | 1.78e-162 | 456 |
MS.gene062669.t1 | MTR_6g065340 | 73.356 | 289 | 61 | 1 | 2 | 290 | 12 | 284 | 2.21e-153 | 433 |
MS.gene062669.t1 | MTR_6g065430 | 59.375 | 288 | 108 | 2 | 8 | 293 | 6 | 286 | 1.60e-123 | 357 |
MS.gene062669.t1 | MTR_1g082210 | 41.034 | 290 | 164 | 2 | 3 | 288 | 8 | 294 | 2.04e-75 | 235 |
MS.gene062669.t1 | MTR_7g093950 | 40.411 | 292 | 165 | 4 | 5 | 288 | 10 | 300 | 2.23e-73 | 230 |
MS.gene062669.t1 | MTR_1g089310 | 41.356 | 295 | 162 | 5 | 5 | 293 | 10 | 299 | 3.82e-73 | 229 |
MS.gene062669.t1 | MTR_1g089310 | 41.356 | 295 | 162 | 5 | 5 | 293 | 26 | 315 | 4.73e-73 | 229 |
MS.gene062669.t1 | MTR_6g464280 | 37.091 | 275 | 159 | 6 | 33 | 300 | 24 | 291 | 5.39e-52 | 174 |
MS.gene062669.t1 | MTR_6g464510 | 35.231 | 281 | 160 | 7 | 30 | 300 | 25 | 293 | 8.78e-48 | 163 |
MS.gene062669.t1 | MTR_6g464320 | 35.689 | 283 | 168 | 6 | 25 | 300 | 17 | 292 | 1.00e-46 | 160 |
MS.gene062669.t1 | MTR_1g102160 | 36.301 | 292 | 159 | 10 | 32 | 309 | 23 | 301 | 1.32e-46 | 160 |
MS.gene062669.t1 | MTR_8g035540 | 34.520 | 281 | 162 | 5 | 32 | 300 | 13 | 283 | 1.35e-46 | 160 |
MS.gene062669.t1 | MTR_8g035520 | 35.496 | 262 | 148 | 5 | 50 | 300 | 40 | 291 | 4.65e-45 | 156 |
MS.gene062669.t1 | MTR_0007s0520 | 37.668 | 223 | 121 | 5 | 49 | 265 | 39 | 249 | 2.38e-42 | 149 |
MS.gene062669.t1 | MTR_8g035500 | 32.734 | 278 | 167 | 6 | 33 | 300 | 17 | 284 | 3.93e-41 | 145 |
MS.gene062669.t1 | MTR_7g406880 | 34.137 | 249 | 141 | 7 | 56 | 286 | 54 | 297 | 9.00e-40 | 143 |
MS.gene062669.t1 | MTR_1g102170 | 34.764 | 233 | 128 | 7 | 33 | 257 | 43 | 259 | 3.97e-39 | 140 |
MS.gene062669.t1 | MTR_6g464120 | 34.034 | 238 | 137 | 6 | 33 | 265 | 29 | 251 | 1.01e-38 | 143 |
MS.gene062669.t1 | MTR_1g012430 | 32.558 | 258 | 156 | 5 | 32 | 286 | 15 | 257 | 1.14e-38 | 139 |
MS.gene062669.t1 | MTR_1g111280 | 34.902 | 255 | 133 | 9 | 49 | 286 | 52 | 290 | 6.61e-37 | 135 |
MS.gene062669.t1 | MTR_4g050140 | 31.579 | 247 | 152 | 3 | 61 | 299 | 42 | 279 | 6.97e-34 | 126 |
MS.gene062669.t1 | MTR_4g086510 | 33.460 | 263 | 153 | 7 | 50 | 302 | 35 | 285 | 1.25e-33 | 125 |
MS.gene062669.t1 | MTR_4g086480 | 31.298 | 262 | 157 | 5 | 50 | 302 | 39 | 286 | 3.97e-32 | 122 |
MS.gene062669.t1 | MTR_3g012440 | 31.022 | 274 | 162 | 5 | 32 | 286 | 19 | 284 | 7.55e-32 | 121 |
MS.gene062669.t1 | MTR_7g056207 | 31.136 | 273 | 161 | 7 | 44 | 301 | 56 | 316 | 8.42e-32 | 122 |
MS.gene062669.t1 | MTR_7g107040 | 29.900 | 301 | 175 | 7 | 11 | 299 | 4 | 280 | 2.23e-31 | 120 |
MS.gene062669.t1 | MTR_4g086470 | 30.709 | 254 | 153 | 5 | 50 | 294 | 38 | 277 | 1.58e-28 | 112 |
MS.gene062669.t1 | MTR_4g086540 | 32.973 | 185 | 113 | 3 | 39 | 221 | 33 | 208 | 7.03e-28 | 110 |
MS.gene062669.t1 | MTR_6g022710 | 31.579 | 209 | 106 | 3 | 90 | 261 | 154 | 362 | 3.43e-25 | 105 |
MS.gene062669.t1 | MTR_3g101420 | 27.692 | 260 | 161 | 5 | 50 | 299 | 34 | 276 | 4.26e-25 | 103 |
MS.gene062669.t1 | MTR_6g065470 | 36.842 | 171 | 76 | 3 | 8 | 160 | 6 | 162 | 8.97e-25 | 98.2 |
MS.gene062669.t1 | MTR_1g105020 | 28.625 | 269 | 159 | 9 | 33 | 286 | 21 | 271 | 1.89e-22 | 95.9 |
MS.gene062669.t1 | MTR_5g005900 | 28.309 | 272 | 161 | 11 | 32 | 286 | 21 | 275 | 2.62e-22 | 95.5 |
MS.gene062669.t1 | MTR_3g450680 | 28.049 | 246 | 151 | 7 | 54 | 286 | 48 | 280 | 1.07e-21 | 94.0 |
MS.gene062669.t1 | MTR_8g040860 | 26.838 | 272 | 160 | 8 | 32 | 286 | 28 | 277 | 2.88e-21 | 92.8 |
MS.gene062669.t1 | MTR_5g005920 | 26.829 | 246 | 150 | 7 | 54 | 284 | 45 | 275 | 3.78e-21 | 92.4 |
MS.gene062669.t1 | MTR_5g005850 | 27.126 | 247 | 152 | 7 | 54 | 286 | 45 | 277 | 7.21e-21 | 91.7 |
MS.gene062669.t1 | MTR_0007s0480 | 40.404 | 99 | 50 | 3 | 172 | 265 | 1 | 95 | 4.57e-16 | 75.1 |
MS.gene062669.t1 | MTR_7g051020 | 28.470 | 281 | 164 | 10 | 32 | 294 | 24 | 285 | 6.06e-16 | 77.4 |
MS.gene062669.t1 | MTR_1g104930 | 28.287 | 251 | 148 | 8 | 60 | 294 | 48 | 282 | 7.15e-16 | 77.4 |
MS.gene062669.t1 | MTR_1g104933 | 27.823 | 248 | 149 | 7 | 60 | 294 | 46 | 276 | 9.45e-15 | 73.9 |
MS.gene062669.t1 | MTR_6g065480 | 52.632 | 57 | 26 | 1 | 234 | 290 | 1 | 56 | 2.14e-14 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062669.t1 | AT5G23530 | 54.693 | 309 | 119 | 7 | 2 | 306 | 5 | 296 | 2.52e-117 | 342 |
MS.gene062669.t1 | AT5G27320 | 40.803 | 299 | 167 | 3 | 6 | 299 | 11 | 304 | 8.91e-76 | 236 |
MS.gene062669.t1 | AT3G63010 | 39.863 | 291 | 163 | 6 | 5 | 288 | 10 | 295 | 1.17e-68 | 218 |
MS.gene062669.t1 | AT3G05120 | 38.542 | 288 | 169 | 2 | 6 | 288 | 11 | 295 | 8.15e-67 | 213 |
MS.gene062669.t1 | AT5G62180 | 36.496 | 274 | 164 | 6 | 33 | 300 | 21 | 290 | 3.14e-51 | 172 |
MS.gene062669.t1 | AT2G45600 | 33.333 | 255 | 147 | 6 | 59 | 300 | 38 | 282 | 1.66e-43 | 152 |
MS.gene062669.t1 | AT2G45610 | 34.028 | 288 | 172 | 6 | 33 | 310 | 22 | 301 | 2.04e-43 | 152 |
MS.gene062669.t1 | AT1G68620 | 33.725 | 255 | 148 | 5 | 57 | 300 | 57 | 301 | 1.16e-42 | 150 |
MS.gene062669.t1 | AT5G16080 | 31.047 | 277 | 167 | 6 | 49 | 314 | 54 | 317 | 2.14e-37 | 136 |
MS.gene062669.t1 | AT5G06570 | 35.461 | 282 | 153 | 8 | 32 | 299 | 37 | 303 | 5.17e-34 | 127 |
MS.gene062669.t1 | AT5G06570 | 35.461 | 282 | 153 | 8 | 32 | 299 | 37 | 303 | 5.17e-34 | 127 |
MS.gene062669.t1 | AT5G06570 | 35.461 | 282 | 153 | 8 | 32 | 299 | 22 | 288 | 5.48e-34 | 127 |
MS.gene062669.t1 | AT5G06570 | 35.461 | 282 | 153 | 8 | 32 | 299 | 22 | 288 | 5.48e-34 | 127 |
MS.gene062669.t1 | AT1G19190 | 32.787 | 244 | 140 | 7 | 50 | 284 | 32 | 260 | 1.87e-32 | 122 |
MS.gene062669.t1 | AT3G48690 | 33.333 | 246 | 143 | 7 | 50 | 284 | 32 | 267 | 2.67e-31 | 120 |
MS.gene062669.t1 | AT3G48700 | 30.830 | 253 | 144 | 6 | 50 | 284 | 32 | 271 | 6.36e-31 | 119 |
MS.gene062669.t1 | AT1G47480 | 28.521 | 284 | 182 | 7 | 14 | 296 | 5 | 268 | 2.28e-30 | 117 |
MS.gene062669.t1 | AT1G49640 | 31.034 | 232 | 147 | 7 | 54 | 282 | 37 | 258 | 1.80e-27 | 109 |
MS.gene062669.t1 | AT5G14310 | 33.191 | 235 | 110 | 5 | 96 | 286 | 151 | 382 | 7.02e-27 | 110 |
MS.gene062669.t1 | AT2G03550 | 31.120 | 241 | 141 | 6 | 50 | 282 | 32 | 255 | 3.03e-26 | 106 |
MS.gene062669.t1 | AT3G27320 | 28.720 | 289 | 127 | 6 | 48 | 257 | 48 | 336 | 6.36e-26 | 107 |
MS.gene062669.t1 | AT3G27320 | 33.186 | 226 | 102 | 6 | 73 | 257 | 151 | 368 | 6.96e-25 | 104 |
MS.gene062669.t1 | AT1G49660 | 28.936 | 235 | 153 | 4 | 54 | 282 | 36 | 262 | 1.46e-23 | 99.0 |
MS.gene062669.t1 | AT1G49650 | 30.932 | 236 | 146 | 7 | 54 | 282 | 92 | 317 | 3.27e-23 | 99.0 |
Find 103 sgRNAs with CRISPR-Local
Find 368 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACCGGAAGGGTGGCGGTTT+TGG | 0.181057 | 6.4:-45825306 | None:intergenic |
TCCCAGAACGGTTCCCTTAA+TGG | 0.232118 | 6.4:+45829921 | MS.gene062669:CDS |
AGACAGTGCCGGTGCAAATT+TGG | 0.247856 | 6.4:+45825571 | MS.gene062669:CDS |
TGCCATTAAGGGAACCGTTC+TGG | 0.262711 | 6.4:-45829923 | None:intergenic |
TGCCGAGGATTTGTCGGGTT+TGG | 0.292392 | 6.4:+45825820 | MS.gene062669:CDS |
TTGGTGGAAACGCCGTTAAC+AGG | 0.301029 | 6.4:-45825194 | None:intergenic |
TTTCCAAGGGAGGAAGGGTT+TGG | 0.301842 | 6.4:-45825054 | None:intergenic |
AGGAAGGGTTTGGGTTTGTT+TGG | 0.313143 | 6.4:-45825044 | None:intergenic |
GCATCGTAAGCAAAGGAATC+AGG | 0.317659 | 6.4:-45825368 | None:intergenic |
GGCGTTAACGATAACGTCTT+TGG | 0.348769 | 6.4:-45825213 | None:intergenic |
GGCACATCATGTTGCGGTTA+GGG | 0.354169 | 6.4:+45825592 | MS.gene062669:CDS |
CACCAAAACCGCCACCCTTC+CGG | 0.359575 | 6.4:+45825304 | MS.gene062669:CDS |
GGATTGATCCTTTAAATGAT+TGG | 0.359729 | 6.4:+45825873 | MS.gene062669:CDS |
TTCCAAGGGAGGAAGGGTTT+GGG | 0.366931 | 6.4:-45825053 | None:intergenic |
TTGCTTACGATGCTGTTTGC+CGG | 0.371816 | 6.4:+45825378 | MS.gene062669:CDS |
TGGCACATCATGTTGCGGTT+AGG | 0.373873 | 6.4:+45825591 | MS.gene062669:CDS |
CCGTTAACAGGGATGGCGTT+AGG | 0.383299 | 6.4:-45825182 | None:intergenic |
GCCATTAAGGGAACCGTTCT+GGG | 0.387859 | 6.4:-45829922 | None:intergenic |
GCGGTTAGGGTTTGCAAAGC+AGG | 0.389458 | 6.4:+45825605 | MS.gene062669:CDS |
CTCCGAGAAATCCGGGTTAT+CGG | 0.394443 | 6.4:+45825629 | MS.gene062669:CDS |
AAGCAGGGCTCCGAGAAATC+CGG | 0.404704 | 6.4:+45825621 | MS.gene062669:CDS |
AACCCAAACCCTTCCTCCCT+TGG | 0.409062 | 6.4:+45825051 | MS.gene062669:CDS |
GCCGAATGCCGAGGATTTGT+CGG | 0.412896 | 6.4:+45825814 | MS.gene062669:CDS |
CGTTAACAGGGATGGCGTTA+GGG | 0.417430 | 6.4:-45825181 | None:intergenic |
GGCGGAATTGACGGTGGTAG+TGG | 0.419693 | 6.4:-45825267 | None:intergenic |
CCTAACGCCATCCCTGTTAA+CGG | 0.424067 | 6.4:+45825182 | MS.gene062669:CDS |
TTTACCGGAGGGATCGGATC+GGG | 0.429984 | 6.4:+45825766 | MS.gene062669:CDS |
CCGAATGCCGAGGATTTGTC+GGG | 0.432463 | 6.4:+45825815 | MS.gene062669:CDS |
AAGAAGAGGACATTAAATAC+TGG | 0.435796 | 6.4:+45829896 | MS.gene062669:CDS |
ATTTGCACCGGCACTGTCTC+CGG | 0.436925 | 6.4:-45825567 | None:intergenic |
ACCCGATAACCCGGATTTCT+CGG | 0.437356 | 6.4:-45825631 | None:intergenic |
AGAGGACGGAGGCGGAGATT+AGG | 0.439237 | 6.4:+45825687 | MS.gene062669:CDS |
CCCGACAAATCCTCGGCATT+CGG | 0.443906 | 6.4:-45825815 | None:intergenic |
GTTATCTCCGGCGGAATTGA+CGG | 0.446779 | 6.4:-45825276 | None:intergenic |
TCCGAGAAATCCGGGTTATC+GGG | 0.451778 | 6.4:+45825630 | MS.gene062669:CDS |
TGGGGAGGAGAGGACGGAGG+CGG | 0.459130 | 6.4:+45825679 | MS.gene062669:CDS |
AAAGGAATCAGGGGTGAGAT+AGG | 0.459434 | 6.4:-45825357 | None:intergenic |
CTTTAAATGATTGGCAAAAG+AGG | 0.459493 | 6.4:+45825882 | MS.gene062669:CDS |
GAGGGATCGGATCGGGATCA+TGG | 0.471437 | 6.4:+45825773 | MS.gene062669:CDS |
CATGGCGCGGTTAATGTATG+TGG | 0.473762 | 6.4:+45825791 | MS.gene062669:CDS |
TGGTGGGGAGGAGAGGACGG+AGG | 0.481621 | 6.4:+45825676 | MS.gene062669:CDS |
TTAACGCCGAAAATAACGTT+TGG | 0.482150 | 6.4:+45825228 | MS.gene062669:CDS |
AGCAGGGCTCCGAGAAATCC+GGG | 0.501993 | 6.4:+45825622 | MS.gene062669:CDS |
CATCGTAAGCAAAGGAATCA+GGG | 0.510628 | 6.4:-45825367 | None:intergenic |
CTGTTTGCCGGAGATTCTGC+CGG | 0.510639 | 6.4:+45825390 | MS.gene062669:CDS |
CGGTTAGGGTTTGCAAAGCA+GGG | 0.513032 | 6.4:+45825606 | MS.gene062669:CDS |
GGGATCTCCGTTGGTGTCGA+TGG | 0.513090 | 6.4:+45825715 | MS.gene062669:CDS |
TGTCGATGGCGAGGACTGAT+TGG | 0.513850 | 6.4:+45825729 | MS.gene062669:CDS |
TCGATACCAACCCGATAACC+CGG | 0.516742 | 6.4:-45825640 | None:intergenic |
TGCGATGGATACCGATGCTC+CGG | 0.517437 | 6.4:-45825455 | None:intergenic |
GCGAGATTTCCAAGGGAGGA+AGG | 0.517711 | 6.4:-45825060 | None:intergenic |
ATATTTGGACGAGAATAAAA+CGG | 0.525878 | 6.4:+45825505 | MS.gene062669:CDS |
TTTGGTGTCGATGTTATCTC+CGG | 0.526225 | 6.4:-45825288 | None:intergenic |
CGAGATTTCCAAGGGAGGAA+GGG | 0.532256 | 6.4:-45825059 | None:intergenic |
GATCTAAGAAATTAAGAAAA+CGG | 0.534119 | 6.4:-45825148 | None:intergenic |
ATCCAAACCCGACAAATCCT+CGG | 0.546809 | 6.4:-45825822 | None:intergenic |
GCGGAATTGACGGTGGTAGT+GGG | 0.549165 | 6.4:-45825266 | None:intergenic |
ACCGTCACACGCCGGAGCAT+CGG | 0.554699 | 6.4:+45825444 | MS.gene062669:CDS |
AATGATCACCGGAAGGGTGG+CGG | 0.554851 | 6.4:-45825312 | None:intergenic |
CGGCGTGTGACGGTAATTGA+CGG | 0.569268 | 6.4:-45825435 | None:intergenic |
ACCGATGCTCCGGCGTGTGA+CGG | 0.569889 | 6.4:-45825445 | None:intergenic |
TGGCGAGGACTGATTGGATG+TGG | 0.571085 | 6.4:+45825735 | MS.gene062669:CDS |
CTCCGTTGGTGTCGATGGCG+AGG | 0.572685 | 6.4:+45825720 | MS.gene062669:CDS |
TGGTGGAAACGCCGTTAACA+GGG | 0.577904 | 6.4:-45825193 | None:intergenic |
ATTGAAATGCGAGATTTCCA+AGG | 0.579236 | 6.4:-45825068 | None:intergenic |
GATAGGTAAATCCACCTCCA+TGG | 0.586090 | 6.4:-45825340 | None:intergenic |
TGATCCCGATCCGATCCCTC+CGG | 0.587634 | 6.4:-45825770 | None:intergenic |
TTTGTCGGGTTTGGATTACC+CGG | 0.592514 | 6.4:+45825829 | MS.gene062669:CDS |
TTCCTCGCCGGAGACAGTGC+CGG | 0.593734 | 6.4:+45825560 | MS.gene062669:CDS |
AGAAATCCGGGTTATCGGGT+TGG | 0.598480 | 6.4:+45825634 | MS.gene062669:CDS |
CTGTTGGGGTAGTTAAGAAG+AGG | 0.599461 | 6.4:+45829882 | MS.gene062669:CDS |
GACGCTTCACGTCGCTCTAA+CGG | 0.599989 | 6.4:+45825113 | MS.gene062669:CDS |
AAATTTGGCACATCATGTTG+CGG | 0.600308 | 6.4:+45825586 | MS.gene062669:CDS |
ATGATGTGCCAAATTTGCAC+CGG | 0.607886 | 6.4:-45825579 | None:intergenic |
GGAAACGCCGTTAACAGGGA+TGG | 0.608074 | 6.4:-45825189 | None:intergenic |
GTGTCAAGATGTTTCCTCGC+CGG | 0.608393 | 6.4:+45825548 | MS.gene062669:CDS |
GTTAACGATAACGTCTTTGG+TGG | 0.608902 | 6.4:-45825210 | None:intergenic |
TAGGCTCGAGGGATCTCCGT+TGG | 0.609000 | 6.4:+45825706 | MS.gene062669:CDS |
CCATGGAAGAAAATGATCAC+CGG | 0.609666 | 6.4:-45825323 | None:intergenic |
TCTCCATCGTCGTATTGCGA+TGG | 0.613465 | 6.4:-45825470 | None:intergenic |
ATGGCGCGGTTAATGTATGT+GGG | 0.615269 | 6.4:+45825792 | MS.gene062669:CDS |
ACTACCACCGTCAATTCCGC+CGG | 0.615288 | 6.4:+45825269 | MS.gene062669:CDS |
GTTAACAGGGATGGCGTTAG+GGG | 0.618052 | 6.4:-45825180 | None:intergenic |
TAAATACTGGTCTCCCAGAA+CGG | 0.619049 | 6.4:+45829909 | MS.gene062669:CDS |
GCAAACAGCATCGTAAGCAA+AGG | 0.620676 | 6.4:-45825375 | None:intergenic |
GGAAGAAAATGATCACCGGA+AGG | 0.622089 | 6.4:-45825319 | None:intergenic |
GAAAATGATCACCGGAAGGG+TGG | 0.622802 | 6.4:-45825315 | None:intergenic |
TATCCATCGCAATACGACGA+TGG | 0.630849 | 6.4:+45825467 | MS.gene062669:CDS |
GGTGTCGATGTTATCTCCGG+CGG | 0.631109 | 6.4:-45825285 | None:intergenic |
GGAGGCGGAGATTAGGCTCG+AGG | 0.635168 | 6.4:+45825694 | MS.gene062669:CDS |
TTGAAATGCGAGATTTCCAA+GGG | 0.635723 | 6.4:-45825067 | None:intergenic |
TGGTAGTGGGTGTAAAGAGA+CGG | 0.645623 | 6.4:-45825253 | None:intergenic |
CACCGGCACTGTCTCCGGCG+AGG | 0.645978 | 6.4:-45825562 | None:intergenic |
ATCGGATCGGGATCATGGCG+CGG | 0.650554 | 6.4:+45825778 | MS.gene062669:CDS |
GTCCTCGCCATCGACACCAA+CGG | 0.652569 | 6.4:-45825722 | None:intergenic |
ATCGTAAGCAAAGGAATCAG+GGG | 0.663525 | 6.4:-45825366 | None:intergenic |
GAAGAAAATGATCACCGGAA+GGG | 0.667962 | 6.4:-45825318 | None:intergenic |
ATCTCCGGCGGAATTGACGG+TGG | 0.683201 | 6.4:-45825273 | None:intergenic |
AAATGCGAGATTTCCAAGGG+AGG | 0.686074 | 6.4:-45825064 | None:intergenic |
GAGGCGGAGATTAGGCTCGA+GGG | 0.689293 | 6.4:+45825695 | MS.gene062669:CDS |
CGTCAATTACCGTCACACGC+CGG | 0.702798 | 6.4:+45825436 | MS.gene062669:CDS |
TGTATGTGGGCCGAATGCCG+AGG | 0.703597 | 6.4:+45825805 | MS.gene062669:CDS |
CTAAGAAATTAAGAAAACGG+CGG | 0.730991 | 6.4:-45825145 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTAAAATAAAAAAAA+AGG | + | chr6.4:45829840-45829859 | MS.gene062669:intron | 0.0% |
!! | CAAATATAAATTAAAAAGAA+AGG | - | chr6.4:45828218-45828237 | None:intergenic | 10.0% |
!! | GAACTAAATTAATATTTATT+CGG | - | chr6.4:45828276-45828295 | None:intergenic | 10.0% |
!! | TGATATAGAAAAAATAAATT+AGG | + | chr6.4:45829273-45829292 | MS.gene062669:intron | 10.0% |
!! | TGATTTATTTAAATTATTAG+CGG | + | chr6.4:45827239-45827258 | MS.gene062669:intron | 10.0% |
!!! | AAATATATATTTTTTGGTTT+TGG | + | chr6.4:45826767-45826786 | MS.gene062669:intron | 10.0% |
!!! | AGTTTATAATGATTTTTTTA+AGG | + | chr6.4:45829210-45829229 | MS.gene062669:intron | 10.0% |
!!! | GTTTATAATGATTTTTTTAA+GGG | + | chr6.4:45829211-45829230 | MS.gene062669:intron | 10.0% |
!!! | TAAAATATATTTTTTGGATT+CGG | - | chr6.4:45827001-45827020 | None:intergenic | 10.0% |
!!! | TCTGTAAAATATATATTTTT+TGG | + | chr6.4:45826761-45826780 | MS.gene062669:intron | 10.0% |
!! | CAAAAGAAATATTTACATAA+TGG | - | chr6.4:45826733-45826752 | None:intergenic | 15.0% |
!! | TGAATTCTATTAATAAAATG+AGG | + | chr6.4:45828167-45828186 | MS.gene062669:intron | 15.0% |
!!! | ATCCAAAAAATATATTTTAC+AGG | + | chr6.4:45827002-45827021 | MS.gene062669:intron | 15.0% |
!!! | ATTTTGGTTAAAAGATTTTT+TGG | + | chr6.4:45826478-45826497 | MS.gene062669:intron | 15.0% |
!!! | CATTATGTAAATATTTCTTT+TGG | + | chr6.4:45826731-45826750 | MS.gene062669:intron | 15.0% |
!! | AAAATTATCCATATTACAGA+AGG | - | chr6.4:45826645-45826664 | None:intergenic | 20.0% |
!! | ATAATAAATTCATAGTTGTG+TGG | + | chr6.4:45826087-45826106 | MS.gene062669:intron | 20.0% |
!! | ATTAATATGCTGAAACAATT+TGG | + | chr6.4:45827082-45827101 | MS.gene062669:intron | 20.0% |
!! | CATTATTGTCATTATAACTA+AGG | + | chr6.4:45829633-45829652 | MS.gene062669:intron | 20.0% |
!! | GATCTAAGAAATTAAGAAAA+CGG | - | chr6.4:45825151-45825170 | None:intergenic | 20.0% |
!! | TCGTATTGAATTTATAATCT+AGG | + | chr6.4:45826321-45826340 | MS.gene062669:intron | 20.0% |
!! | TTTATTTCAATAGTCTCTTT+GGG | + | chr6.4:45827837-45827856 | MS.gene062669:intron | 20.0% |
!!! | AAAAGTTTTTGGGTAAAAAA+AGG | - | chr6.4:45827951-45827970 | None:intergenic | 20.0% |
!!! | AAAATTTGCTCAAATTACAA+GGG | - | chr6.4:45826861-45826880 | None:intergenic | 20.0% |
!!! | AAACACCTATTTAAAACTTA+TGG | - | chr6.4:45828850-45828869 | None:intergenic | 20.0% |
!!! | ATAAGTTTTAAATAGGTGTT+TGG | + | chr6.4:45828849-45828868 | MS.gene062669:intron | 20.0% |
!!! | CAAAAAATATATTTTACAGG+AGG | + | chr6.4:45827005-45827024 | MS.gene062669:intron | 20.0% |
!!! | CAATAATCATAATCTAGAAT+TGG | - | chr6.4:45826050-45826069 | None:intergenic | 20.0% |
!!! | CATTTTAGAAATTTACAGAA+TGG | - | chr6.4:45826675-45826694 | None:intergenic | 20.0% |
!!! | CTCCTGTAAAATATATTTTT+TGG | - | chr6.4:45827007-45827026 | None:intergenic | 20.0% |
!!! | GAAATTTTCTCAAATTACAT+GGG | - | chr6.4:45826830-45826849 | None:intergenic | 20.0% |
!!! | GAATACCATAAGTTTTAAAT+AGG | + | chr6.4:45828842-45828861 | MS.gene062669:intron | 20.0% |
!!! | TAAAGTTATTTTGTGAATGA+GGG | + | chr6.4:45828722-45828741 | MS.gene062669:intron | 20.0% |
!!! | TCTGTAATATGGATAATTTT+CGG | + | chr6.4:45826645-45826664 | MS.gene062669:intron | 20.0% |
!!! | TGAAATTTTCTCAAATTACA+TGG | - | chr6.4:45826831-45826850 | None:intergenic | 20.0% |
!!! | TTATAGTATTGATTAGAGTA+TGG | - | chr6.4:45829110-45829129 | None:intergenic | 20.0% |
!!! | TTGTACTCTTTTACAAATTA+GGG | + | chr6.4:45826605-45826624 | MS.gene062669:intron | 20.0% |
!!! | TTTCAGCATATTAATTTGTA+GGG | - | chr6.4:45827077-45827096 | None:intergenic | 20.0% |
!!! | TTTTTAAATTAGGCATGTTT+TGG | + | chr6.4:45827153-45827172 | MS.gene062669:intron | 20.0% |
! | AAAGAAAGAAGAGAAATAGA+GGG | - | chr6.4:45827816-45827835 | None:intergenic | 25.0% |
! | AGATGAAGAGATATAAATGT+TGG | + | chr6.4:45829546-45829565 | MS.gene062669:intron | 25.0% |
! | ATAGTTTAGAAATTTCTGCT+GGG | + | chr6.4:45828664-45828683 | MS.gene062669:intron | 25.0% |
! | ATATTTGGACGAGAATAAAA+CGG | + | chr6.4:45825505-45825524 | MS.gene062669:CDS | 25.0% |
! | CAAAATATAAAGCATGAATG+TGG | - | chr6.4:45827306-45827325 | None:intergenic | 25.0% |
! | GAAAAAAAGATCAACATTTG+GGG | + | chr6.4:45827911-45827930 | MS.gene062669:intron | 25.0% |
! | GGAAAAAAAGATCAACATTT+GGG | + | chr6.4:45827910-45827929 | MS.gene062669:intron | 25.0% |
! | GGTTATAAATACCATTAATG+TGG | - | chr6.4:45827708-45827727 | None:intergenic | 25.0% |
! | TGTATTATTAGTAGCAGTTA+AGG | + | chr6.4:45826124-45826143 | MS.gene062669:intron | 25.0% |
! | TGTCCTAAAATTAGAAGTTA+TGG | + | chr6.4:45826174-45826193 | MS.gene062669:intron | 25.0% |
! | TTATTTCAATAGTCTCTTTG+GGG | + | chr6.4:45827838-45827857 | MS.gene062669:intron | 25.0% |
!! | AAAATTTGCTCAAATTACCA+AGG | - | chr6.4:45826893-45826912 | None:intergenic | 25.0% |
!! | AAATTTGCTCAAATTACAAG+GGG | - | chr6.4:45826860-45826879 | None:intergenic | 25.0% |
!! | ATGATTGGTTGAAAAAATGT+GGG | + | chr6.4:45825909-45825928 | MS.gene062669:intron | 25.0% |
!! | ATGTTTTACCTTCTGTAATA+TGG | + | chr6.4:45826692-45826711 | MS.gene062669:intron | 25.0% |
!! | CAAAATTTGCTCAAATTACA+AGG | - | chr6.4:45826862-45826881 | None:intergenic | 25.0% |
!! | CTTGTAATTTGAGCAAATTT+TGG | + | chr6.4:45826860-45826879 | MS.gene062669:intron | 25.0% |
!! | CTTTATTTCAATAGTCTCTT+TGG | + | chr6.4:45827836-45827855 | MS.gene062669:intron | 25.0% |
!! | GTTGTACTCTTTTACAAATT+AGG | + | chr6.4:45826604-45826623 | MS.gene062669:intron | 25.0% |
!! | GTTTATGATGTTTTCGTTTA+AGG | + | chr6.4:45826214-45826233 | MS.gene062669:intron | 25.0% |
!! | TAAAAAGCATGAATCATAGT+TGG | - | chr6.4:45825959-45825978 | None:intergenic | 25.0% |
!! | TATATGTATTGATGTAGTGT+CGG | - | chr6.4:45827204-45827223 | None:intergenic | 25.0% |
!! | TATGATTGGTTGAAAAAATG+TGG | + | chr6.4:45825908-45825927 | MS.gene062669:intron | 25.0% |
!! | TATTTTCTTTTTACCCTCTT+GGG | - | chr6.4:45828103-45828122 | None:intergenic | 25.0% |
!! | TTATTTTCTTTTTACCCTCT+TGG | - | chr6.4:45828104-45828123 | None:intergenic | 25.0% |
!! | TTTGTTTAGTGTTCACATTT+TGG | + | chr6.4:45826284-45826303 | MS.gene062669:intron | 25.0% |
!! | TTTTTGGACAATGTTATGTT+GGG | + | chr6.4:45826494-45826513 | MS.gene062669:intron | 25.0% |
!!! | AGAAGCTGTTTTGAAATATT+TGG | + | chr6.4:45825490-45825509 | MS.gene062669:CDS | 25.0% |
!!! | CATAAGTTTTAAATAGTGCA+AGG | + | chr6.4:45828886-45828905 | MS.gene062669:intron | 25.0% |
!!! | CTAAAGTTATTTTGTGAATG+AGG | + | chr6.4:45828721-45828740 | MS.gene062669:intron | 25.0% |
!!! | CTTTATATTTTGAGTGTCAT+TGG | + | chr6.4:45827314-45827333 | MS.gene062669:intron | 25.0% |
!!! | GTTTCAGCATATTAATTTGT+AGG | - | chr6.4:45827078-45827097 | None:intergenic | 25.0% |
!!! | GTTTTTTTTGACCACATTAA+TGG | + | chr6.4:45827694-45827713 | MS.gene062669:intron | 25.0% |
!!! | TATGACTGTTTCTATGAAAT+AGG | + | chr6.4:45828914-45828933 | MS.gene062669:intron | 25.0% |
!!! | TCTACTTTTATTATGAAAGC+CGG | - | chr6.4:45828944-45828963 | None:intergenic | 25.0% |
!!! | TTGGTAATTTGAGCAAATTT+TGG | + | chr6.4:45826892-45826911 | MS.gene062669:intron | 25.0% |
!!! | TTTTTTGGACAATGTTATGT+TGG | + | chr6.4:45826493-45826512 | MS.gene062669:intron | 25.0% |
AAAATAATGACCAACCATCT+TGG | - | chr6.4:45828053-45828072 | None:intergenic | 30.0% | |
AAATAATGACCAACCATCTT+GGG | - | chr6.4:45828052-45828071 | None:intergenic | 30.0% | |
AACATGGTAATAGCAAACAA+AGG | - | chr6.4:45829412-45829431 | None:intergenic | 30.0% | |
AAGAAGAGGACATTAAATAC+TGG | + | chr6.4:45829896-45829915 | MS.gene062669:CDS | 30.0% | |
AATGTGTGTTTGTCTTTAGT+TGG | + | chr6.4:45828765-45828784 | MS.gene062669:intron | 30.0% | |
ACTGTACAAAATCGATGATA+TGG | - | chr6.4:45826929-45826948 | None:intergenic | 30.0% | |
ACTTGGGGTAAATTTAAATC+TGG | - | chr6.4:45828013-45828032 | None:intergenic | 30.0% | |
ACTTTATCATCAGTGTTTGA+AGG | - | chr6.4:45827429-45827448 | None:intergenic | 30.0% | |
CAAACACTGATGATAAAGTT+AGG | + | chr6.4:45827430-45827449 | MS.gene062669:intron | 30.0% | |
CACAATACAAATTCCAAACA+TGG | - | chr6.4:45829428-45829447 | None:intergenic | 30.0% | |
CATAAACATCTCATATGTTG+TGG | - | chr6.4:45826201-45826220 | None:intergenic | 30.0% | |
CTAAGAAATTAAGAAAACGG+CGG | - | chr6.4:45825148-45825167 | None:intergenic | 30.0% | |
CTTTAAATGATTGGCAAAAG+AGG | + | chr6.4:45825882-45825901 | MS.gene062669:CDS | 30.0% | |
GAAAGAAAGAAGAGAAATAG+AGG | - | chr6.4:45827817-45827836 | None:intergenic | 30.0% | |
GATAGTTTAGAAATTTCTGC+TGG | + | chr6.4:45828663-45828682 | MS.gene062669:intron | 30.0% | |
GGATTGATCCTTTAAATGAT+TGG | + | chr6.4:45825873-45825892 | MS.gene062669:CDS | 30.0% | |
GGGAAAAAAAGATCAACATT+TGG | + | chr6.4:45827909-45827928 | MS.gene062669:intron | 30.0% | |
GGTACACTAAAATGCTTTAT+TGG | - | chr6.4:45829371-45829390 | None:intergenic | 30.0% | |
TACTACAAGAGAGAAGTTAT+TGG | - | chr6.4:45826546-45826565 | None:intergenic | 30.0% | |
TATTTCAATAGTCTCTTTGG+GGG | + | chr6.4:45827839-45827858 | MS.gene062669:intron | 30.0% | |
TGACGAAGAATTTCAAGATT+TGG | + | chr6.4:45829516-45829535 | MS.gene062669:intron | 30.0% | |
TTGGAATTTGTATTGTGCAA+GGG | + | chr6.4:45829431-45829450 | MS.gene062669:intron | 30.0% | |
! | AATTTGCTCAAATTACAAGG+GGG | - | chr6.4:45826859-45826878 | None:intergenic | 30.0% |
! | ATTTTCTTTTTACCCTCTTG+GGG | - | chr6.4:45828102-45828121 | None:intergenic | 30.0% |
! | CTCTTTTGCCAATCATTTAA+AGG | - | chr6.4:45825884-45825903 | None:intergenic | 30.0% |
! | GGTCCATAACTTCTAATTTT+AGG | - | chr6.4:45826180-45826199 | None:intergenic | 30.0% |
! | GTTTTACTCCACTGTAATAT+AGG | - | chr6.4:45827046-45827065 | None:intergenic | 30.0% |
! | TGGGATAAAATTTTCCATGA+AGG | - | chr6.4:45826794-45826813 | None:intergenic | 30.0% |
! | TTTGGAATTTGTATTGTGCA+AGG | + | chr6.4:45829430-45829449 | MS.gene062669:intron | 30.0% |
!! | ATGATTAGTTTGCTTATGCA+TGG | + | chr6.4:45826357-45826376 | MS.gene062669:intron | 30.0% |
!! | TTGTTTGCTATTACCATGTT+TGG | + | chr6.4:45829412-45829431 | MS.gene062669:intron | 30.0% |
!!! | AGTTTTAAATAGGTGTTTGG+TGG | + | chr6.4:45828852-45828871 | MS.gene062669:intron | 30.0% |
AAAAAGTGAGCAGTCTTCTT+GGG | - | chr6.4:45828078-45828097 | None:intergenic | 35.0% | |
AAATTTGGCACATCATGTTG+CGG | + | chr6.4:45825586-45825605 | MS.gene062669:CDS | 35.0% | |
AAGAAGATTCTCTTTACCCA+CGG | - | chr6.4:45827976-45827995 | None:intergenic | 35.0% | |
AAGGTTGTTAAGACGAGTAT+GGG | + | chr6.4:45829180-45829199 | MS.gene062669:intron | 35.0% | |
AATAATGACCAACCATCTTG+GGG | - | chr6.4:45828051-45828070 | None:intergenic | 35.0% | |
AATGGAGGTCAAAAACAGAT+TGG | - | chr6.4:45826573-45826592 | None:intergenic | 35.0% | |
ACAAAATCGATGATATGGCA+GGG | - | chr6.4:45826924-45826943 | None:intergenic | 35.0% | |
ACAACCTTCATCATTCTTGA+AGG | - | chr6.4:45829168-45829187 | None:intergenic | 35.0% | |
ACATGGGATCTCAAATTACA+TGG | - | chr6.4:45826814-45826833 | None:intergenic | 35.0% | |
ATAATCAACTGACCAGATTC+AGG | - | chr6.4:45825998-45826017 | None:intergenic | 35.0% | |
ATAGGTGGGAATGTTAGTAT+AGG | - | chr6.4:45827729-45827748 | None:intergenic | 35.0% | |
ATTGAAATGCGAGATTTCCA+AGG | - | chr6.4:45825071-45825090 | None:intergenic | 35.0% | |
ATTGACTATTTGTGCACAAG+TGG | - | chr6.4:45826425-45826444 | None:intergenic | 35.0% | |
ATTTGCTCAAATTACCAAGG+AGG | - | chr6.4:45826890-45826909 | None:intergenic | 35.0% | |
CAACCTTCATCATTCTTGAA+GGG | - | chr6.4:45829167-45829186 | None:intergenic | 35.0% | |
CATGGGATCTCAAATTACAT+GGG | - | chr6.4:45826813-45826832 | None:intergenic | 35.0% | |
CTGTAATATAGGTCATTTCC+TGG | - | chr6.4:45827035-45827054 | None:intergenic | 35.0% | |
CTGTCTTACCTTCTGTAATA+TGG | + | chr6.4:45826634-45826653 | MS.gene062669:intron | 35.0% | |
GAAAAGACATCATCAACTTG+GGG | - | chr6.4:45828028-45828047 | None:intergenic | 35.0% | |
GACTTAGATGTTATCAAGCA+CGG | + | chr6.4:45827126-45827145 | MS.gene062669:intron | 35.0% | |
GATATAAATGTTGGTGTGTC+TGG | + | chr6.4:45829555-45829574 | MS.gene062669:intron | 35.0% | |
GGAAAAGACATCATCAACTT+GGG | - | chr6.4:45828029-45828048 | None:intergenic | 35.0% | |
GGAAATGACCTATATTACAG+TGG | + | chr6.4:45827035-45827054 | MS.gene062669:intron | 35.0% | |
TAAAAAGTGAGCAGTCTTCT+TGG | - | chr6.4:45828079-45828098 | None:intergenic | 35.0% | |
TAAGTCACGCAAAACTCATA+AGG | - | chr6.4:45827550-45827569 | None:intergenic | 35.0% | |
TACAAAATCGATGATATGGC+AGG | - | chr6.4:45826925-45826944 | None:intergenic | 35.0% | |
TACGTTAGTTAACTAACGCA+GGG | + | chr6.4:45828641-45828660 | MS.gene062669:intron | 35.0% | |
TATGTTTCAAAATACCCCCT+AGG | - | chr6.4:45826959-45826978 | None:intergenic | 35.0% | |
TCAGTTGATTATGCAAGTCA+AGG | + | chr6.4:45826006-45826025 | MS.gene062669:intron | 35.0% | |
TCATAGTTGTGTGGTAATTG+AGG | + | chr6.4:45826096-45826115 | MS.gene062669:intron | 35.0% | |
TGGGTAAAGAGAATCTTCTT+GGG | + | chr6.4:45827976-45827995 | MS.gene062669:intron | 35.0% | |
TTAACGCCGAAAATAACGTT+TGG | + | chr6.4:45825228-45825247 | MS.gene062669:CDS | 35.0% | |
TTACGTTAGTTAACTAACGC+AGG | + | chr6.4:45828640-45828659 | MS.gene062669:intron | 35.0% | |
TTGAAATGCGAGATTTCCAA+GGG | - | chr6.4:45825070-45825089 | None:intergenic | 35.0% | |
TTGACTATTTGTGCACAAGT+GGG | - | chr6.4:45826424-45826443 | None:intergenic | 35.0% | |
TTTCTATGAAATAGGAGGTC+CGG | + | chr6.4:45828922-45828941 | MS.gene062669:intron | 35.0% | |
! | ACCCAAAAACTTTTTACCGT+GGG | + | chr6.4:45827957-45827976 | MS.gene062669:intron | 35.0% |
! | ACCCACGGTAAAAAGTTTTT+GGG | - | chr6.4:45827961-45827980 | None:intergenic | 35.0% |
! | AGGAAATAGAGAGGTATAGA+GGG | - | chr6.4:45827758-45827777 | None:intergenic | 35.0% |
! | ATTTTGTGAATGAGGGTAAG+AGG | + | chr6.4:45828729-45828748 | MS.gene062669:intron | 35.0% |
! | CGAGAATAAAACGGTTTTAC+CGG | + | chr6.4:45825514-45825533 | MS.gene062669:CDS | 35.0% |
! | CTTGATTTTGTGTCAGATGT+AGG | + | chr6.4:45826447-45826466 | MS.gene062669:intron | 35.0% |
! | GTACAACATGATGATGTGAA+TGG | - | chr6.4:45826591-45826610 | None:intergenic | 35.0% |
! | TAAATAGGTGTTTGGTGGTT+AGG | + | chr6.4:45828857-45828876 | MS.gene062669:intron | 35.0% |
! | TACCCAAAAACTTTTTACCG+TGG | + | chr6.4:45827956-45827975 | MS.gene062669:intron | 35.0% |
! | TACCCACGGTAAAAAGTTTT+TGG | - | chr6.4:45827962-45827981 | None:intergenic | 35.0% |
! | TTTTAGTGTACCTCTGTGTA+TGG | + | chr6.4:45829379-45829398 | MS.gene062669:intron | 35.0% |
!! | AATTTGGTAGTGATCCAGAA+TGG | + | chr6.4:45827098-45827117 | MS.gene062669:intron | 35.0% |
!! | ACGGAACCAAACGTTATTTT+CGG | - | chr6.4:45825237-45825256 | None:intergenic | 35.0% |
!! | AGGTATAGAGGGGTATTTAT+AGG | - | chr6.4:45827747-45827766 | None:intergenic | 35.0% |
!! | ATACGCTCGTTTTTATTGGT+GGG | + | chr6.4:45825852-45825871 | MS.gene062669:CDS | 35.0% |
!! | ATAGAGGGGTATTTATAGGT+GGG | - | chr6.4:45827743-45827762 | None:intergenic | 35.0% |
!! | ATTTGGTAGTGATCCAGAAT+GGG | + | chr6.4:45827099-45827118 | MS.gene062669:intron | 35.0% |
!! | GACTGTTTCTATGAAATAGG+AGG | + | chr6.4:45828917-45828936 | MS.gene062669:intron | 35.0% |
!! | GCACGGACACTTTTTAAATT+AGG | + | chr6.4:45827143-45827162 | MS.gene062669:intron | 35.0% |
!! | GGCAAAAGAGGTATTATGAT+TGG | + | chr6.4:45825894-45825913 | MS.gene062669:intron | 35.0% |
!! | TAGTTTGCTTATGCATGGTT+TGG | + | chr6.4:45826362-45826381 | MS.gene062669:intron | 35.0% |
!! | TATAGAGGGGTATTTATAGG+TGG | - | chr6.4:45827744-45827763 | None:intergenic | 35.0% |
!! | TTTTGAGTGTCATTGGACTT+TGG | + | chr6.4:45827321-45827340 | MS.gene062669:intron | 35.0% |
!!! | CAAATTTTGGTTTACCTCCT+TGG | + | chr6.4:45826873-45826892 | MS.gene062669:intron | 35.0% |
!!! | TGCAACGTTTTTTGACTGTT+GGG | + | chr6.4:45829867-45829886 | MS.gene062669:CDS | 35.0% |
!!! | TTGATCTTTTTTTCCCCAAG+CGG | - | chr6.4:45827905-45827924 | None:intergenic | 35.0% |
!!! | TTGCAACGTTTTTTGACTGT+TGG | + | chr6.4:45829866-45829885 | MS.gene062669:CDS | 35.0% |
!!! | TTTTTGGTTTTGGACCTTCA+TGG | + | chr6.4:45826777-45826796 | MS.gene062669:intron | 35.0% |
AAAAGTGAGCAGACTTCTTG+GGG | + | chr6.4:45827863-45827882 | MS.gene062669:intron | 40.0% | |
AAAAGTGAGCAGTCTTCTTG+GGG | - | chr6.4:45828077-45828096 | None:intergenic | 40.0% | |
AAAATCGATGATATGGCAGG+GGG | - | chr6.4:45826922-45826941 | None:intergenic | 40.0% | |
AAGATGACGATGACTCTTAG+AGG | + | chr6.4:45827398-45827417 | MS.gene062669:intron | 40.0% | |
AGACATGCAATGCTACATGT+TGG | + | chr6.4:45826150-45826169 | MS.gene062669:intron | 40.0% | |
AGAGAAAGTGATATGGTGTG+AGG | - | chr6.4:45827778-45827797 | None:intergenic | 40.0% | |
AGATGACGATGACTCTTAGA+GGG | + | chr6.4:45827399-45827418 | MS.gene062669:intron | 40.0% | |
AGGATGGAGAGAAAGTGATA+TGG | - | chr6.4:45827785-45827804 | None:intergenic | 40.0% | |
AGGCAAATAACCATACACAG+AGG | - | chr6.4:45829392-45829411 | None:intergenic | 40.0% | |
ATAATGACCAACCATCTTGG+GGG | - | chr6.4:45828050-45828069 | None:intergenic | 40.0% | |
ATCGTAAGCAAAGGAATCAG+GGG | - | chr6.4:45825369-45825388 | None:intergenic | 40.0% | |
ATCTAAGTCTTTCCCCATTC+TGG | - | chr6.4:45827115-45827134 | None:intergenic | 40.0% | |
ATGATGTGCCAAATTTGCAC+CGG | - | chr6.4:45825582-45825601 | None:intergenic | 40.0% | |
CAAAAGTGAGCAGACTTCTT+GGG | + | chr6.4:45827862-45827881 | MS.gene062669:intron | 40.0% | |
CAAAATCGATGATATGGCAG+GGG | - | chr6.4:45826923-45826942 | None:intergenic | 40.0% | |
CAACCCTTCAAGAATGATGA+AGG | + | chr6.4:45829161-45829180 | MS.gene062669:intron | 40.0% | |
CAATAAAAACGAGCGTATCC+GGG | - | chr6.4:45825850-45825869 | None:intergenic | 40.0% | |
CATCGTAAGCAAAGGAATCA+GGG | - | chr6.4:45825370-45825389 | None:intergenic | 40.0% | |
CCAATAAAAACGAGCGTATC+CGG | - | chr6.4:45825851-45825870 | None:intergenic | 40.0% | |
CCATGGAAGAAAATGATCAC+CGG | - | chr6.4:45825326-45825345 | None:intergenic | 40.0% | |
GAAGAAAATGATCACCGGAA+GGG | - | chr6.4:45825321-45825340 | None:intergenic | 40.0% | |
GAAGGTTGTTAAGACGAGTA+TGG | + | chr6.4:45829179-45829198 | MS.gene062669:intron | 40.0% | |
GACATGCAATGCTACATGTT+GGG | + | chr6.4:45826151-45826170 | MS.gene062669:intron | 40.0% | |
GGGAAAAGACATCATCAACT+TGG | - | chr6.4:45828030-45828049 | None:intergenic | 40.0% | |
GTGGGTAAAGAGAATCTTCT+TGG | + | chr6.4:45827975-45827994 | MS.gene062669:intron | 40.0% | |
GTGTTTGTCTTTAGTTGGTC+AGG | + | chr6.4:45828770-45828789 | MS.gene062669:intron | 40.0% | |
GTTAACGATAACGTCTTTGG+TGG | - | chr6.4:45825213-45825232 | None:intergenic | 40.0% | |
TATGGTGTGAGGAAATAGAG+AGG | - | chr6.4:45827767-45827786 | None:intergenic | 40.0% | |
TCTTTAGTTGGTCAGGAACA+GGG | + | chr6.4:45828777-45828796 | MS.gene062669:intron | 40.0% | |
TGACTATTTGTGCACAAGTG+GGG | - | chr6.4:45826423-45826442 | None:intergenic | 40.0% | |
TGACTTAAGTCACATACCAC+TGG | + | chr6.4:45827563-45827582 | MS.gene062669:intron | 40.0% | |
TGGACAATGTTATGTTGGGT+GGG | + | chr6.4:45826498-45826517 | MS.gene062669:intron | 40.0% | |
TTGGACAATGTTATGTTGGG+TGG | + | chr6.4:45826497-45826516 | MS.gene062669:intron | 40.0% | |
TTGGTGTGTCTGGTAGATAT+TGG | + | chr6.4:45829565-45829584 | MS.gene062669:intron | 40.0% | |
TTGTACAGTCAGATGTCCTA+GGG | + | chr6.4:45826940-45826959 | MS.gene062669:intron | 40.0% | |
TTTGTACAGTCAGATGTCCT+AGG | + | chr6.4:45826939-45826958 | MS.gene062669:intron | 40.0% | |
! | ATCATTTTCTTCCATGGAGG+TGG | + | chr6.4:45825329-45825348 | MS.gene062669:CDS | 40.0% |
! | CAACATGATGATGTGAATGG+AGG | - | chr6.4:45826588-45826607 | None:intergenic | 40.0% |
! | GAGGAAATAGAGAGGTATAG+AGG | - | chr6.4:45827759-45827778 | None:intergenic | 40.0% |
! | GATGTAGGCGAAGACAATTT+TGG | + | chr6.4:45826462-45826481 | MS.gene062669:intron | 40.0% |
! | GGAAATAGAGAGGTATAGAG+GGG | - | chr6.4:45827757-45827776 | None:intergenic | 40.0% |
! | GTGATCATTTTCTTCCATGG+AGG | + | chr6.4:45825326-45825345 | MS.gene062669:CDS | 40.0% |
! | TAAATACTGGTCTCCCAGAA+CGG | + | chr6.4:45829909-45829928 | MS.gene062669:CDS | 40.0% |
! | TATTTTACAGGAGGCAAACC+AGG | + | chr6.4:45827014-45827033 | MS.gene062669:intron | 40.0% |
! | TTTCCTGATTTGCCTGAATC+TGG | + | chr6.4:45825983-45826002 | MS.gene062669:intron | 40.0% |
!! | AGGGTAAGAGGTTTTGTGAT+TGG | + | chr6.4:45828741-45828760 | MS.gene062669:intron | 40.0% |
!! | GATACGCTCGTTTTTATTGG+TGG | + | chr6.4:45825851-45825870 | MS.gene062669:CDS | 40.0% |
!! | TCATTGGACTTTGGTGTCAT+TGG | + | chr6.4:45827330-45827349 | MS.gene062669:intron | 40.0% |
!! | TTTGGTAGTGATCCAGAATG+GGG | + | chr6.4:45827100-45827119 | MS.gene062669:intron | 40.0% |
!! | TTTGGTGTCGATGTTATCTC+CGG | - | chr6.4:45825291-45825310 | None:intergenic | 40.0% |
!!! | AACACGCGTTTTTTGGACTT+TGG | + | chr6.4:45827635-45827654 | MS.gene062669:intron | 40.0% |
!!! | ACTGAAGAACACGCGTTTTT+TGG | + | chr6.4:45827628-45827647 | MS.gene062669:intron | 40.0% |
!!! | CGACAATAGCGTTGATTTTC+CGG | - | chr6.4:45825412-45825431 | None:intergenic | 40.0% |
!!! | GATGTGGAAAGCGTTTTTAC+CGG | + | chr6.4:45825751-45825770 | MS.gene062669:CDS | 40.0% |
!!! | GCAACGTTTTTTGACTGTTG+GGG | + | chr6.4:45829868-45829887 | MS.gene062669:CDS | 40.0% |
!!! | TGATCTTTTTTTCCCCAAGC+GGG | - | chr6.4:45827904-45827923 | None:intergenic | 40.0% |
AAAATAGTGAGTAGCCCGCT+TGG | + | chr6.4:45827887-45827906 | MS.gene062669:intron | 45.0% | |
AAAGGAATCAGGGGTGAGAT+AGG | - | chr6.4:45825360-45825379 | None:intergenic | 45.0% | |
AAATAGTGAGTAGCCCGCTT+GGG | + | chr6.4:45827888-45827907 | MS.gene062669:intron | 45.0% | |
AAATGCGAGATTTCCAAGGG+AGG | - | chr6.4:45825067-45825086 | None:intergenic | 45.0% | |
AGAAATAGAGGGAGAGAGTG+AGG | - | chr6.4:45827805-45827824 | None:intergenic | 45.0% | |
ATCCAAACCCGACAAATCCT+CGG | - | chr6.4:45825825-45825844 | None:intergenic | 45.0% | |
ATGGCGCGGTTAATGTATGT+GGG | + | chr6.4:45825792-45825811 | MS.gene062669:CDS | 45.0% | |
CTGTTGGGGTAGTTAAGAAG+AGG | + | chr6.4:45829882-45829901 | MS.gene062669:CDS | 45.0% | |
GATAGGTAAATCCACCTCCA+TGG | - | chr6.4:45825343-45825362 | None:intergenic | 45.0% | |
GATGTTGAGGTGAAGTGATG+TGG | + | chr6.4:45827372-45827391 | MS.gene062669:intron | 45.0% | |
GCAAAAGTGAGCAGACTTCT+TGG | + | chr6.4:45827861-45827880 | MS.gene062669:intron | 45.0% | |
GCAAACAGCATCGTAAGCAA+AGG | - | chr6.4:45825378-45825397 | None:intergenic | 45.0% | |
GCATCGTAAGCAAAGGAATC+AGG | - | chr6.4:45825371-45825390 | None:intergenic | 45.0% | |
GGAAGAAAATGATCACCGGA+AGG | - | chr6.4:45825322-45825341 | None:intergenic | 45.0% | |
GGAGGTCAAAAACAGATTGG+TGG | - | chr6.4:45826570-45826589 | None:intergenic | 45.0% | |
GGCGTTAACGATAACGTCTT+TGG | - | chr6.4:45825216-45825235 | None:intergenic | 45.0% | |
GGGTGGGAAGATAAAACAGT+TGG | + | chr6.4:45826514-45826533 | MS.gene062669:intron | 45.0% | |
GTCTTTAGTTGGTCAGGAAC+AGG | + | chr6.4:45828776-45828795 | MS.gene062669:intron | 45.0% | |
GTGTGTCTGGTAGATATTGG+TGG | + | chr6.4:45829568-45829587 | MS.gene062669:intron | 45.0% | |
TATCCATCGCAATACGACGA+TGG | + | chr6.4:45825467-45825486 | MS.gene062669:CDS | 45.0% | |
TGACCAGATTCAGGCAAATC+AGG | - | chr6.4:45825989-45826008 | None:intergenic | 45.0% | |
TGTACAGTCAGATGTCCTAG+GGG | + | chr6.4:45826941-45826960 | MS.gene062669:intron | 45.0% | |
TTTGTCGGGTTTGGATTACC+CGG | + | chr6.4:45825829-45825848 | MS.gene062669:CDS | 45.0% | |
! | AGGAAGGGTTTGGGTTTGTT+TGG | - | chr6.4:45825047-45825066 | None:intergenic | 45.0% |
! | ATAGGTGTTTGGTGGTTAGG+AGG | + | chr6.4:45828860-45828879 | MS.gene062669:intron | 45.0% |
! | CAGTGCGAGCAAAAAGTGTA+AGG | - | chr6.4:45827470-45827489 | None:intergenic | 45.0% |
! | CCGGTGATCATTTTCTTCCA+TGG | + | chr6.4:45825323-45825342 | MS.gene062669:CDS | 45.0% |
! | CTTGACACGTCAGCATTTTC+CGG | - | chr6.4:45825536-45825555 | None:intergenic | 45.0% |
! | TGATGTCTTTTCCCCCAAGA+TGG | + | chr6.4:45828036-45828055 | MS.gene062669:intron | 45.0% |
! | TGATTTTCCGGCAGAATCTC+CGG | - | chr6.4:45825400-45825419 | None:intergenic | 45.0% |
! | TGTTCTTCAGTTCTGACCAC+CGG | - | chr6.4:45827619-45827638 | None:intergenic | 45.0% |
! | TTGCTTACGATGCTGTTTGC+CGG | + | chr6.4:45825378-45825397 | MS.gene062669:CDS | 45.0% |
!! | CACTTTTTGCTCGCACTGTT+TGG | + | chr6.4:45827472-45827491 | MS.gene062669:intron | 45.0% |
!! | CCGGATACGCTCGTTTTTAT+TGG | + | chr6.4:45825848-45825867 | MS.gene062669:CDS | 45.0% |
!! | TGGTAGTGGGTGTAAAGAGA+CGG | - | chr6.4:45825256-45825275 | None:intergenic | 45.0% |
!! | TTGGTGTCATTGGATGCCAT+TGG | + | chr6.4:45827340-45827359 | MS.gene062669:intron | 45.0% |
!!! | GCTCACTTTTTACCCCAAGA+GGG | + | chr6.4:45828087-45828106 | MS.gene062669:intron | 45.0% |
!!! | GTATCGATCCAGCCGTTTTT+TGG | + | chr6.4:45825656-45825675 | MS.gene062669:CDS | 45.0% |
!!! | TGCTCACTTTTTACCCCAAG+AGG | + | chr6.4:45828086-45828105 | MS.gene062669:intron | 45.0% |
!!! | TGGAAAGCGTTTTTACCGGA+GGG | + | chr6.4:45825755-45825774 | MS.gene062669:CDS | 45.0% |
!! | ATATAAAATGAAATTTATAT+CGG | - | chr6.4:45829736-45829755 | None:intergenic | 5.0% |
!!! | ATAAATATTTTTTATGTTTA+CGG | - | chr6.4:45829063-45829082 | None:intergenic | 5.0% |
AACAGGGCGTAAAGGGCTTT+CGG | + | chr6.4:45828793-45828812 | MS.gene062669:intron | 50.0% | |
AATAGTGAGTAGCCCGCTTG+GGG | + | chr6.4:45827889-45827908 | MS.gene062669:intron | 50.0% | |
ACCCGATAACCCGGATTTCT+CGG | - | chr6.4:45825634-45825653 | None:intergenic | 50.0% | |
AGAAATCCGGGTTATCGGGT+TGG | + | chr6.4:45825634-45825653 | MS.gene062669:CDS | 50.0% | |
AGCGTGACTTAACTCACGCA+GGG | - | chr6.4:45827508-45827527 | None:intergenic | 50.0% | |
ATAGAGGGAGAGAGTGAGGA+TGG | - | chr6.4:45827801-45827820 | None:intergenic | 50.0% | |
CAACATCTGACCTGGTCCAA+TGG | - | chr6.4:45827359-45827378 | None:intergenic | 50.0% | |
CATGGCGCGGTTAATGTATG+TGG | + | chr6.4:45825791-45825810 | MS.gene062669:CDS | 50.0% | |
CCTAACGCCATCCCTGTTAA+CGG | + | chr6.4:45825182-45825201 | MS.gene062669:CDS | 50.0% | |
CGAGATTTCCAAGGGAGGAA+GGG | - | chr6.4:45825062-45825081 | None:intergenic | 50.0% | |
CGGTTAGGGTTTGCAAAGCA+GGG | + | chr6.4:45825606-45825625 | MS.gene062669:CDS | 50.0% | |
CGTTAACAGGGATGGCGTTA+GGG | - | chr6.4:45825184-45825203 | None:intergenic | 50.0% | |
CTCCGAGAAATCCGGGTTAT+CGG | + | chr6.4:45825629-45825648 | MS.gene062669:CDS | 50.0% | |
CTCTCCTCCCCACCAAAAAA+CGG | - | chr6.4:45825671-45825690 | None:intergenic | 50.0% | |
CTTCACCTCAACATCTGACC+TGG | - | chr6.4:45827367-45827386 | None:intergenic | 50.0% | |
GAAAATGATCACCGGAAGGG+TGG | - | chr6.4:45825318-45825337 | None:intergenic | 50.0% | |
GGCACATCATGTTGCGGTTA+GGG | + | chr6.4:45825592-45825611 | MS.gene062669:CDS | 50.0% | |
GTACAGTCAGATGTCCTAGG+GGG | + | chr6.4:45826942-45826961 | MS.gene062669:intron | 50.0% | |
GTGTCAAGATGTTTCCTCGC+CGG | + | chr6.4:45825548-45825567 | MS.gene062669:CDS | 50.0% | |
GTTAACAGGGATGGCGTTAG+GGG | - | chr6.4:45825183-45825202 | None:intergenic | 50.0% | |
GTTATCTCCGGCGGAATTGA+CGG | - | chr6.4:45825279-45825298 | None:intergenic | 50.0% | |
TCATTGGATGCCATTGGACC+AGG | + | chr6.4:45827346-45827365 | MS.gene062669:intron | 50.0% | |
TCCGAGAAATCCGGGTTATC+GGG | + | chr6.4:45825630-45825649 | MS.gene062669:CDS | 50.0% | |
TCGATACCAACCCGATAACC+CGG | - | chr6.4:45825643-45825662 | None:intergenic | 50.0% | |
TCTCCATCGTCGTATTGCGA+TGG | - | chr6.4:45825473-45825492 | None:intergenic | 50.0% | |
TGGCACATCATGTTGCGGTT+AGG | + | chr6.4:45825591-45825610 | MS.gene062669:CDS | 50.0% | |
TGGTGGAAACGCCGTTAACA+GGG | - | chr6.4:45825196-45825215 | None:intergenic | 50.0% | |
TTCCAAGGGAGGAAGGGTTT+GGG | - | chr6.4:45825056-45825075 | None:intergenic | 50.0% | |
TTGGACCAGGTCAGATGTTG+AGG | + | chr6.4:45827359-45827378 | MS.gene062669:intron | 50.0% | |
TTGGTGGAAACGCCGTTAAC+AGG | - | chr6.4:45825197-45825216 | None:intergenic | 50.0% | |
TTTCCAAGGGAGGAAGGGTT+TGG | - | chr6.4:45825057-45825076 | None:intergenic | 50.0% | |
! | AGCGTTTTTACCGGAGGGAT+CGG | + | chr6.4:45825760-45825779 | MS.gene062669:CDS | 50.0% |
! | GTCTTTTCCCCCAAGATGGT+TGG | + | chr6.4:45828040-45828059 | MS.gene062669:intron | 50.0% |
! | TTTTACCGGAGGGATCGGAT+CGG | + | chr6.4:45825765-45825784 | MS.gene062669:CDS | 50.0% |
!! | AGACAGTGCCGGTGCAAATT+TGG | + | chr6.4:45825571-45825590 | MS.gene062669:CDS | 50.0% |
!!! | CGATCCAGCCGTTTTTTGGT+GGG | + | chr6.4:45825660-45825679 | MS.gene062669:CDS | 50.0% |
!!! | GATCCAGCCGTTTTTTGGTG+GGG | + | chr6.4:45825661-45825680 | MS.gene062669:CDS | 50.0% |
!!! | GTGGAAAGCGTTTTTACCGG+AGG | + | chr6.4:45825754-45825773 | MS.gene062669:CDS | 50.0% |
!!! | TCGATCCAGCCGTTTTTTGG+TGG | + | chr6.4:45825659-45825678 | MS.gene062669:CDS | 50.0% |
AACCCAAACCCTTCCTCCCT+TGG | + | chr6.4:45825051-45825070 | MS.gene062669:CDS | 55.0% | |
AAGCAGGGCTCCGAGAAATC+CGG | + | chr6.4:45825621-45825640 | MS.gene062669:CDS | 55.0% | |
AATGATCACCGGAAGGGTGG+CGG | - | chr6.4:45825315-45825334 | None:intergenic | 55.0% | |
ACTACCACCGTCAATTCCGC+CGG | + | chr6.4:45825269-45825288 | MS.gene062669:CDS | 55.0% | |
CAGCGTGACTTAACTCACGC+AGG | - | chr6.4:45827509-45827528 | None:intergenic | 55.0% | |
CCCGACAAATCCTCGGCATT+CGG | - | chr6.4:45825818-45825837 | None:intergenic | 55.0% | |
CCGAATGCCGAGGATTTGTC+GGG | + | chr6.4:45825815-45825834 | MS.gene062669:CDS | 55.0% | |
CCGTTAACAGGGATGGCGTT+AGG | - | chr6.4:45825185-45825204 | None:intergenic | 55.0% | |
CGGCGTGTGACGGTAATTGA+CGG | - | chr6.4:45825438-45825457 | None:intergenic | 55.0% | |
CGTCAATTACCGTCACACGC+CGG | + | chr6.4:45825436-45825455 | MS.gene062669:CDS | 55.0% | |
CTGTTTGCCGGAGATTCTGC+CGG | + | chr6.4:45825390-45825409 | MS.gene062669:CDS | 55.0% | |
GACGCTTCACGTCGCTCTAA+CGG | + | chr6.4:45825113-45825132 | MS.gene062669:CDS | 55.0% | |
GCCGAATGCCGAGGATTTGT+CGG | + | chr6.4:45825814-45825833 | MS.gene062669:CDS | 55.0% | |
GCGAGATTTCCAAGGGAGGA+AGG | - | chr6.4:45825063-45825082 | None:intergenic | 55.0% | |
GCGAGTTAACTCACGCACGT+TGG | + | chr6.4:45827593-45827612 | MS.gene062669:intron | 55.0% | |
GCGGAATTGACGGTGGTAGT+GGG | - | chr6.4:45825269-45825288 | None:intergenic | 55.0% | |
GCGGTTAGGGTTTGCAAAGC+AGG | + | chr6.4:45825605-45825624 | MS.gene062669:CDS | 55.0% | |
GCGTGACTTAACTCACGCAG+GGG | - | chr6.4:45827507-45827526 | None:intergenic | 55.0% | |
GGAAACGCCGTTAACAGGGA+TGG | - | chr6.4:45825192-45825211 | None:intergenic | 55.0% | |
GGTCAGGAACAGGGCGTAAA+GGG | + | chr6.4:45828786-45828805 | MS.gene062669:intron | 55.0% | |
GTTAACTCACGCACGTTGGC+CGG | + | chr6.4:45827597-45827616 | MS.gene062669:intron | 55.0% | |
TGCCGAGGATTTGTCGGGTT+TGG | + | chr6.4:45825820-45825839 | MS.gene062669:CDS | 55.0% | |
TGCGATGGATACCGATGCTC+CGG | - | chr6.4:45825458-45825477 | None:intergenic | 55.0% | |
TGGCGAGGACTGATTGGATG+TGG | + | chr6.4:45825735-45825754 | MS.gene062669:CDS | 55.0% | |
TGGTCAGGAACAGGGCGTAA+AGG | + | chr6.4:45828785-45828804 | MS.gene062669:intron | 55.0% | |
TGTCGATGGCGAGGACTGAT+TGG | + | chr6.4:45825729-45825748 | MS.gene062669:CDS | 55.0% | |
TTTACCGGAGGGATCGGATC+GGG | + | chr6.4:45825766-45825785 | MS.gene062669:CDS | 55.0% | |
! | ATTTGCACCGGCACTGTCTC+CGG | - | chr6.4:45825570-45825589 | None:intergenic | 55.0% |
! | TTTTGGTGGGGAGGAGAGGA+CGG | + | chr6.4:45825673-45825692 | MS.gene062669:CDS | 55.0% |
!! | GGTGTCGATGTTATCTCCGG+CGG | - | chr6.4:45825288-45825307 | None:intergenic | 55.0% |
!!! | CGTTTTTTGGTGGGGAGGAG+AGG | + | chr6.4:45825669-45825688 | MS.gene062669:CDS | 55.0% |
AGAGGACGGAGGCGGAGATT+AGG | + | chr6.4:45825687-45825706 | MS.gene062669:CDS | 60.0% | |
AGCAGGGCTCCGAGAAATCC+GGG | + | chr6.4:45825622-45825641 | MS.gene062669:CDS | 60.0% | |
ATCGGATCGGGATCATGGCG+CGG | + | chr6.4:45825778-45825797 | MS.gene062669:CDS | 60.0% | |
ATCTCCGGCGGAATTGACGG+TGG | - | chr6.4:45825276-45825295 | None:intergenic | 60.0% | |
CACCAAAACCGCCACCCTTC+CGG | + | chr6.4:45825304-45825323 | MS.gene062669:CDS | 60.0% | |
CCTCCCCACCAAAAAACGGC+TGG | - | chr6.4:45825667-45825686 | None:intergenic | 60.0% | |
GAGGCGGAGATTAGGCTCGA+GGG | + | chr6.4:45825695-45825714 | MS.gene062669:CDS | 60.0% | |
GAGGGATCGGATCGGGATCA+TGG | + | chr6.4:45825773-45825792 | MS.gene062669:CDS | 60.0% | |
GCGTGAGTTAACTCGCGCAC+AGG | - | chr6.4:45827589-45827608 | None:intergenic | 60.0% | |
GGCGGAATTGACGGTGGTAG+TGG | - | chr6.4:45825270-45825289 | None:intergenic | 60.0% | |
GTCCTCGCCATCGACACCAA+CGG | - | chr6.4:45825725-45825744 | None:intergenic | 60.0% | |
TAGGCTCGAGGGATCTCCGT+TGG | + | chr6.4:45825706-45825725 | MS.gene062669:CDS | 60.0% | |
TGATCCCGATCCGATCCCTC+CGG | - | chr6.4:45825773-45825792 | None:intergenic | 60.0% | |
TGTATGTGGGCCGAATGCCG+AGG | + | chr6.4:45825805-45825824 | MS.gene062669:CDS | 60.0% | |
TTAACTCGCGCACAGGCCAG+TGG | - | chr6.4:45827582-45827601 | None:intergenic | 60.0% | |
!! | GGGATCTCCGTTGGTGTCGA+TGG | + | chr6.4:45825715-45825734 | MS.gene062669:CDS | 60.0% |
!!! | CCAGCCGTTTTTTGGTGGGG+AGG | + | chr6.4:45825664-45825683 | MS.gene062669:CDS | 60.0% |
AACTCACGCACGTTGGCCGG+TGG | + | chr6.4:45827600-45827619 | MS.gene062669:intron | 65.0% | |
ACCGATGCTCCGGCGTGTGA+CGG | - | chr6.4:45825448-45825467 | None:intergenic | 65.0% | |
ACCGTCACACGCCGGAGCAT+CGG | + | chr6.4:45825444-45825463 | MS.gene062669:CDS | 65.0% | |
GGAGGCGGAGATTAGGCTCG+AGG | + | chr6.4:45825694-45825713 | MS.gene062669:CDS | 65.0% | |
TTCCTCGCCGGAGACAGTGC+CGG | + | chr6.4:45825560-45825579 | MS.gene062669:CDS | 65.0% | |
! | GGGCGCGAGCGAAACTTGCT+CGG | + | chr6.4:45828684-45828703 | MS.gene062669:intron | 65.0% |
!! | CACCGGAAGGGTGGCGGTTT+TGG | - | chr6.4:45825309-45825328 | None:intergenic | 65.0% |
!! | CTCCGTTGGTGTCGATGGCG+AGG | + | chr6.4:45825720-45825739 | MS.gene062669:CDS | 65.0% |
TGGGGAGGAGAGGACGGAGG+CGG | + | chr6.4:45825679-45825698 | MS.gene062669:CDS | 70.0% | |
TGGTGGGGAGGAGAGGACGG+AGG | + | chr6.4:45825676-45825695 | MS.gene062669:CDS | 70.0% | |
CACCGGCACTGTCTCCGGCG+AGG | - | chr6.4:45825565-45825584 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.4 | gene | 45825035 | 45829940 | 45825035 | ID=MS.gene062669 |
chr6.4 | mRNA | 45825035 | 45829940 | 45825035 | ID=MS.gene062669.t1;Parent=MS.gene062669 |
chr6.4 | exon | 45825035 | 45825903 | 45825035 | ID=MS.gene062669.t1.exon1;Parent=MS.gene062669.t1 |
chr6.4 | CDS | 45825035 | 45825903 | 45825035 | ID=cds.MS.gene062669.t1;Parent=MS.gene062669.t1 |
chr6.4 | exon | 45829862 | 45829940 | 45829862 | ID=MS.gene062669.t1.exon2;Parent=MS.gene062669.t1 |
chr6.4 | CDS | 45829862 | 45829940 | 45829862 | ID=cds.MS.gene062669.t1;Parent=MS.gene062669.t1 |
Gene Sequence |
Protein sequence |