Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062781.t1 | KEH40041.1 | 93 | 383 | 20 | 2 | 1 | 382 | 1 | 377 | 1.50E-202 | 715.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062781.t1 | Q9FMN2 | 80.2 | 248 | 48 | 1 | 133 | 380 | 679 | 925 | 7.5e-118 | 425.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062781.t1 | G7I3N3 | 93.0 | 383 | 20 | 2 | 1 | 382 | 141 | 517 | 1.1e-202 | 715.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050105 | MS.gene062781 | 0.82969 | 4.47E-55 | -1.69E-46 |
| MS.gene051122 | MS.gene062781 | 0.815763 | 7.83E-52 | -1.69E-46 |
| MS.gene051935 | MS.gene062781 | 0.817172 | 3.78E-52 | -1.69E-46 |
| MS.gene05216 | MS.gene062781 | 0.808869 | 2.51E-50 | -1.69E-46 |
| MS.gene052586 | MS.gene062781 | 0.806064 | 9.86E-50 | -1.69E-46 |
| MS.gene052674 | MS.gene062781 | 0.806789 | 6.93E-50 | -1.69E-46 |
| MS.gene052675 | MS.gene062781 | 0.807715 | 4.41E-50 | -1.69E-46 |
| MS.gene052677 | MS.gene062781 | 0.810848 | 9.40E-51 | -1.69E-46 |
| MS.gene054468 | MS.gene062781 | 0.815941 | 7.14E-52 | -1.69E-46 |
| MS.gene054479 | MS.gene062781 | 0.85419 | 1.45E-61 | -1.69E-46 |
| MS.gene055701 | MS.gene062781 | 0.841633 | 4.22E-58 | -1.69E-46 |
| MS.gene056480 | MS.gene062781 | 0.812743 | 3.64E-51 | -1.69E-46 |
| MS.gene057026 | MS.gene062781 | 0.832326 | 1.01E-55 | -1.69E-46 |
| MS.gene057156 | MS.gene062781 | -0.814803 | 1.28E-51 | -1.69E-46 |
| MS.gene058081 | MS.gene062781 | 0.84606 | 2.75E-59 | -1.69E-46 |
| MS.gene058289 | MS.gene062781 | 0.800363 | 1.49E-48 | -1.69E-46 |
| MS.gene059439 | MS.gene062781 | 0.820974 | 5.17E-53 | -1.69E-46 |
| MS.gene059952 | MS.gene062781 | 0.827203 | 1.78E-54 | -1.69E-46 |
| MS.gene060373 | MS.gene062781 | 0.805487 | 1.30E-49 | -1.69E-46 |
| MS.gene060685 | MS.gene062781 | 0.804234 | 2.38E-49 | -1.69E-46 |
| MS.gene060850 | MS.gene062781 | 0.801903 | 7.23E-49 | -1.69E-46 |
| MS.gene060851 | MS.gene062781 | 0.816194 | 6.27E-52 | -1.69E-46 |
| MS.gene060852 | MS.gene062781 | 0.814031 | 1.89E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062781.t1 | MTR_1g019740 | 92.950 | 383 | 20 | 2 | 1 | 382 | 1 | 377 | 0.0 | 724 |
| MS.gene062781.t1 | MTR_1g019740 | 92.950 | 383 | 20 | 2 | 1 | 382 | 141 | 517 | 0.0 | 723 |
| MS.gene062781.t1 | MTR_3g101590 | 82.258 | 248 | 43 | 1 | 133 | 380 | 581 | 827 | 5.55e-147 | 437 |
| MS.gene062781.t1 | MTR_7g100370 | 73.438 | 256 | 66 | 2 | 126 | 380 | 608 | 862 | 7.05e-134 | 404 |
| MS.gene062781.t1 | MTR_1g067380 | 74.590 | 244 | 61 | 1 | 137 | 380 | 678 | 920 | 3.59e-133 | 404 |
| MS.gene062781.t1 | MTR_3g101590 | 82.390 | 159 | 28 | 0 | 133 | 291 | 581 | 739 | 3.46e-89 | 285 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062781.t1 | AT5G42870 | 80.242 | 248 | 48 | 1 | 133 | 380 | 679 | 925 | 1.00e-143 | 431 |
| MS.gene062781.t1 | AT5G42870 | 79.435 | 248 | 45 | 2 | 133 | 380 | 679 | 920 | 1.42e-139 | 420 |
| MS.gene062781.t1 | AT3G09560 | 74.390 | 246 | 63 | 0 | 135 | 380 | 654 | 899 | 1.27e-131 | 399 |
| MS.gene062781.t1 | AT3G09560 | 74.390 | 246 | 63 | 0 | 135 | 380 | 654 | 899 | 1.27e-131 | 399 |
| MS.gene062781.t1 | AT3G09560 | 74.390 | 246 | 63 | 0 | 135 | 380 | 654 | 899 | 1.27e-131 | 399 |
| MS.gene062781.t1 | AT3G09560 | 74.390 | 246 | 63 | 0 | 135 | 380 | 654 | 899 | 1.27e-131 | 399 |
| MS.gene062781.t1 | AT5G42870 | 80.976 | 205 | 39 | 0 | 133 | 337 | 679 | 883 | 1.20e-116 | 360 |
Find 89 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCCAAGTTGTTGGATTTA+AGG | 0.119943 | 1.4:+3525898 | MS.gene062781:CDS |
| ATTTCAATTCCTGGAATTTC+TGG | 0.157366 | 1.4:+3530753 | MS.gene062781:CDS |
| TTTCCAAAACCAGCATAAAA+AGG | 0.268711 | 1.4:-3530303 | None:intergenic |
| ATTCAAAATTGCATGTTTAG+AGG | 0.306466 | 1.4:+3530160 | MS.gene062781:CDS |
| AGAATAAATAGATTTGTATT+GGG | 0.316446 | 1.4:+3525828 | MS.gene062781:CDS |
| TGCAGGAGGATTTCAATTCC+TGG | 0.325571 | 1.4:+3530744 | MS.gene062781:intron |
| TCTCCCTTCCTTCAGATTCA+AGG | 0.332182 | 1.4:-3526369 | None:intergenic |
| TTCCACACATCACAGGAAAA+TGG | 0.342813 | 1.4:+3529734 | MS.gene062781:intron |
| GAGAATAAATAGATTTGTAT+TGG | 0.343977 | 1.4:+3525827 | MS.gene062781:CDS |
| CTTTAGCGATTCCAACCTTA+AGG | 0.348082 | 1.4:-3530350 | None:intergenic |
| CGATGAAATCAGTTACCTTA+AGG | 0.392578 | 1.4:+3530335 | MS.gene062781:CDS |
| CTGTTTCTCTACACCTATGA+TGG | 0.393409 | 1.4:+3526406 | MS.gene062781:CDS |
| ATTTATGTATCACCTGGTTA+AGG | 0.395576 | 1.4:-3529826 | None:intergenic |
| GTCAATTCATGCCTTTAGTT+GGG | 0.399122 | 1.4:+3529340 | MS.gene062781:CDS |
| TTTAATGCTTCCAGGACATC+AGG | 0.400587 | 1.4:+3530256 | MS.gene062781:intron |
| GAGAAAGTCAAGTTTGAATC+TGG | 0.403816 | 1.4:+3525996 | MS.gene062781:CDS |
| GGTCAATTCATGCCTTTAGT+TGG | 0.412243 | 1.4:+3529339 | MS.gene062781:CDS |
| TCACCTGGTTAAGGTTGAAT+AGG | 0.421278 | 1.4:-3529817 | None:intergenic |
| CTTAAGGTTGGAATCGCTAA+AGG | 0.424789 | 1.4:+3530351 | MS.gene062781:CDS |
| TGCCTTTAGTTGGGATTGAC+TGG | 0.425638 | 1.4:+3529349 | MS.gene062781:CDS |
| AAATTACCACAATCCTTTAC+CGG | 0.427602 | 1.4:-3526224 | None:intergenic |
| GAAAACTCAGGGTGTTAACT+TGG | 0.435480 | 1.4:+3525968 | MS.gene062781:CDS |
| CAGTGCTCGTGCAATTTCTC+AGG | 0.436002 | 1.4:+3529775 | MS.gene062781:CDS |
| CGCTGAATCTGCATCACCAC+TGG | 0.436104 | 1.4:-3525859 | None:intergenic |
| ACCTGCCGCATCCCCATCAT+AGG | 0.445358 | 1.4:-3526419 | None:intergenic |
| CCCTATAATTTATTAGAAAG+AGG | 0.449741 | 1.4:-3530783 | None:intergenic |
| GGGCAACTTCCAGAAATTCC+AGG | 0.456984 | 1.4:-3530762 | None:intergenic |
| AAGGTTGAATAGGAATTGTC+TGG | 0.463826 | 1.4:-3529807 | None:intergenic |
| AAGGGATTGTTCTGTTAAGA+AGG | 0.468316 | 1.4:+3526310 | MS.gene062781:CDS |
| GAAATTACAACAGGACCATC+TGG | 0.470676 | 1.4:-3529953 | None:intergenic |
| TGTTTCTCTACACCTATGAT+GGG | 0.472114 | 1.4:+3526407 | MS.gene062781:CDS |
| GATGACAGTTGTTCAGAAGT+TGG | 0.475026 | 1.4:-3526347 | None:intergenic |
| ACCTATGATGGGGATGCGGC+AGG | 0.483533 | 1.4:+3526418 | MS.gene062781:CDS |
| GAAATCAGTTACCTTAAGGT+TGG | 0.483544 | 1.4:+3530339 | MS.gene062781:CDS |
| TTATAGCTATGAATGATTCT+CGG | 0.488537 | 1.4:+3525799 | None:intergenic |
| TGAGGTTGCAGCCAAGTTGT+TGG | 0.490682 | 1.4:+3525890 | MS.gene062781:CDS |
| AAAATTGAGGGAGTGATTAA+GGG | 0.490787 | 1.4:+3526185 | MS.gene062781:CDS |
| TGTTGCAGGTCAGACGTTCT+AGG | 0.500038 | 1.4:+3529318 | MS.gene062781:intron |
| CCTGCTCAGATGAGTCTGTA+GGG | 0.506484 | 1.4:-3530581 | None:intergenic |
| CCGTCAGGGGAAATTACAAC+AGG | 0.506661 | 1.4:-3529962 | None:intergenic |
| CCTATAATTTATTAGAAAGA+GGG | 0.509739 | 1.4:-3530782 | None:intergenic |
| CCCTACAGACTCATCTGAGC+AGG | 0.511436 | 1.4:+3530581 | MS.gene062781:CDS |
| ATAGATTTGTATTGGGGCCA+AGG | 0.525870 | 1.4:+3525835 | MS.gene062781:CDS |
| GGGTGTTGATCTAGAGATAC+CGG | 0.530252 | 1.4:+3526205 | MS.gene062781:CDS |
| TTTCCTTCTCTATATAGAGA+AGG | 0.536561 | 1.4:+3529989 | MS.gene062781:CDS |
| AATATTTATAATTAATCCCA+AGG | 0.543298 | 1.4:+3530377 | MS.gene062781:CDS |
| TCATCCTTGAATCTGAAGGA+AGG | 0.548459 | 1.4:+3526365 | MS.gene062781:CDS |
| CCACCTTAAATCCAACAACT+TGG | 0.553602 | 1.4:-3525901 | None:intergenic |
| TAGGAATTGTCTGGTGTGAT+GGG | 0.553963 | 1.4:-3529798 | None:intergenic |
| AGTCAAGTTTGAATCTGGCA+AGG | 0.554206 | 1.4:+3526001 | MS.gene062781:CDS |
| ATAGGAATTGTCTGGTGTGA+TGG | 0.555255 | 1.4:-3529799 | None:intergenic |
| TCTCTTCATGCTCTCGTGAA+CGG | 0.555622 | 1.4:+3530549 | MS.gene062781:CDS |
| AACTGTCAACATTGGTCGAA+GGG | 0.556516 | 1.4:+3526292 | MS.gene062781:CDS |
| GACCAGTCAATCCCAACTAA+AGG | 0.557857 | 1.4:-3529351 | None:intergenic |
| TCTGCATCACCACTGGACCT+TGG | 0.559022 | 1.4:-3525852 | None:intergenic |
| GGGATTGACTGGTCACAGAC+AGG | 0.560023 | 1.4:+3529360 | MS.gene062781:CDS |
| CCAAGTTGTTGGATTTAAGG+TGG | 0.571926 | 1.4:+3525901 | MS.gene062781:CDS |
| CATCCTTGAATCTGAAGGAA+GGG | 0.573317 | 1.4:+3526366 | MS.gene062781:CDS |
| ACTGTCATCCTTGAATCTGA+AGG | 0.578321 | 1.4:+3526361 | MS.gene062781:CDS |
| CTTAAGGTAACTGATTTCAT+CGG | 0.580341 | 1.4:-3530334 | None:intergenic |
| GAATAAATAGATTTGTATTG+GGG | 0.580790 | 1.4:+3525829 | MS.gene062781:CDS |
| TGATCTAGAGATACCGGTAA+AGG | 0.585910 | 1.4:+3526211 | MS.gene062781:CDS |
| CTACACCTATGATGGGGATG+CGG | 0.587747 | 1.4:+3526414 | MS.gene062781:CDS |
| TAGTGATATCAGATGTGGAT+GGG | 0.588202 | 1.4:+3527405 | MS.gene062781:CDS |
| GAGATACCGGTAAAGGATTG+TGG | 0.589687 | 1.4:+3526218 | MS.gene062781:CDS |
| ATACCTTCTCTATATAGAGA+AGG | 0.590890 | 1.4:-3529992 | None:intergenic |
| CCTGTTGTAATTTCCCCTGA+CGG | 0.592235 | 1.4:+3529962 | MS.gene062781:CDS |
| ACCTGCTCAGATGAGTCTGT+AGG | 0.608192 | 1.4:-3530582 | None:intergenic |
| GTTTCTCTACACCTATGATG+GGG | 0.608738 | 1.4:+3526408 | MS.gene062781:CDS |
| AAATCTCGAACTGTCAACAT+TGG | 0.612310 | 1.4:+3526284 | MS.gene062781:CDS |
| TACGGAAAGAAAGAAAACTC+AGG | 0.613250 | 1.4:+3525956 | MS.gene062781:CDS |
| TGCTCAGATGAGTCTGTAGG+GGG | 0.614155 | 1.4:-3530579 | None:intergenic |
| GAACTGTCAACATTGGTCGA+AGG | 0.615065 | 1.4:+3526291 | MS.gene062781:CDS |
| ATAGTGATATCAGATGTGGA+TGG | 0.615545 | 1.4:+3527404 | MS.gene062781:CDS |
| TCGTATAGTGATATCAGATG+TGG | 0.622752 | 1.4:+3527400 | MS.gene062781:CDS |
| ATGTGGATGGGACTATTACA+AGG | 0.630686 | 1.4:+3527417 | MS.gene062781:CDS |
| TTAATGCTTCCAGGACATCA+GGG | 0.632684 | 1.4:+3530257 | MS.gene062781:intron |
| GTATTGGGGCCAAGGTCCAG+TGG | 0.634869 | 1.4:+3525843 | MS.gene062781:CDS |
| ACGGAAAGAAAGAAAACTCA+GGG | 0.637372 | 1.4:+3525957 | MS.gene062781:CDS |
| ATTCCTATTCAACCTTAACC+AGG | 0.638969 | 1.4:+3529814 | MS.gene062781:CDS |
| GATGGGAAAGTCTTACCAGA+TGG | 0.640538 | 1.4:+3529938 | MS.gene062781:CDS |
| AGATTCAGCGGAGCGTGCTG+AGG | 0.642225 | 1.4:+3525872 | MS.gene062781:CDS |
| CAGTGGTGATGCAGATTCAG+CGG | 0.642820 | 1.4:+3525860 | MS.gene062781:CDS |
| CTGCTCAGATGAGTCTGTAG+GGG | 0.650960 | 1.4:-3530580 | None:intergenic |
| CATAGGTGTAGAGAAACAGA+AGG | 0.668317 | 1.4:-3526402 | None:intergenic |
| TACAACTGTGCAGCTACCTG+AGG | 0.681382 | 1.4:+3526034 | MS.gene062781:CDS |
| TCAGGGTGTTAACTTGGACA+AGG | 0.709142 | 1.4:+3525974 | MS.gene062781:CDS |
| TGAATTCGTGAGGAGCTCTG+CGG | 0.710130 | 1.4:-3530142 | None:intergenic |
| GCTCAGATGAGTCTGTAGGG+GGG | 0.751001 | 1.4:-3530578 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTTATAATTAATCCCA+AGG | + | chr1.4:3530377-3530396 | MS.gene062781:CDS | 15.0% |
| !! | AGAATAAATAGATTTGTATT+GGG | + | chr1.4:3525828-3525847 | MS.gene062781:CDS | 15.0% |
| !! | ATATGTTATAGTTATTGTTT+AGG | + | chr1.4:3526157-3526176 | MS.gene062781:intron | 15.0% |
| !! | TAATTATTAATTGATGTTCT+AGG | + | chr1.4:3529611-3529630 | MS.gene062781:intron | 15.0% |
| !! | TATATATAATCAGTATGTTT+AGG | - | chr1.4:3530100-3530119 | None:intergenic | 15.0% |
| !! | TATGTTATAGTTATTGTTTA+GGG | + | chr1.4:3526158-3526177 | MS.gene062781:intron | 15.0% |
| !! | TTATAAAGATAAACTTTATG+AGG | + | chr1.4:3528745-3528764 | MS.gene062781:intron | 15.0% |
| !!! | ATATAGATTTTCATCATTTT+TGG | - | chr1.4:3526710-3526729 | None:intergenic | 15.0% |
| !!! | TGCAAAATAGATTTTATATT+CGG | + | chr1.4:3527472-3527491 | MS.gene062781:intron | 15.0% |
| !! | AAAAACATAACTACTATAGA+AGG | - | chr1.4:3530058-3530077 | None:intergenic | 20.0% |
| !! | AAAACATAACTACTATAGAA+GGG | - | chr1.4:3530057-3530076 | None:intergenic | 20.0% |
| !! | AACAAATTGAATTCAAAACT+CGG | - | chr1.4:3526830-3526849 | None:intergenic | 20.0% |
| !! | AAGATTGTATATTTGCATTA+TGG | + | chr1.4:3527260-3527279 | MS.gene062781:intron | 20.0% |
| !! | AGTTTATTAAACAAAGAAGT+CGG | - | chr1.4:3528686-3528705 | None:intergenic | 20.0% |
| !! | ATAAAAGATAGAAAATTCCA+AGG | - | chr1.4:3527219-3527238 | None:intergenic | 20.0% |
| !! | ATATATCTGGATGTTAAAAA+TGG | - | chr1.4:3529231-3529250 | None:intergenic | 20.0% |
| !! | GAATAAATAGATTTGTATTG+GGG | + | chr1.4:3525829-3525848 | MS.gene062781:CDS | 20.0% |
| !! | GAGAATAAATAGATTTGTAT+TGG | + | chr1.4:3525827-3525846 | MS.gene062781:CDS | 20.0% |
| !! | TCTTTGATTAAAAATGAATC+AGG | - | chr1.4:3527976-3527995 | None:intergenic | 20.0% |
| !!! | AATTTATGAAGTACTATTGT+GGG | + | chr1.4:3529046-3529065 | MS.gene062781:intron | 20.0% |
| !!! | ACAATAATAGTTGAAGTATT+AGG | - | chr1.4:3528999-3529018 | None:intergenic | 20.0% |
| !!! | ATGATGTTTGATTTTATTCT+TGG | + | chr1.4:3526060-3526079 | MS.gene062781:intron | 20.0% |
| !!! | TCATTTATTTTCAGAAATCA+AGG | + | chr1.4:3529389-3529408 | MS.gene062781:CDS | 20.0% |
| !!! | TCTTCATTTTTATTGTTGTT+TGG | + | chr1.4:3526458-3526477 | MS.gene062781:intron | 20.0% |
| !!! | TTTTATATTAGATTGATGCT+CGG | + | chr1.4:3527354-3527373 | MS.gene062781:intron | 20.0% |
| ! | AAACATAACTACTATAGAAG+GGG | - | chr1.4:3530056-3530075 | None:intergenic | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | + | chr1.4:3528148-3528167 | MS.gene062781:intron | 25.0% |
| ! | AATCTCTGCAATCATTAAAT+TGG | + | chr1.4:3526772-3526791 | MS.gene062781:intron | 25.0% |
| ! | AATGAATATGTGAAGAAGAA+TGG | + | chr1.4:3526510-3526529 | MS.gene062781:intron | 25.0% |
| ! | ACATAATTACAGACGAATAA+AGG | - | chr1.4:3528811-3528830 | None:intergenic | 25.0% |
| ! | AGTATTTGCTTAATGAGAAT+AGG | + | chr1.4:3526092-3526111 | MS.gene062781:intron | 25.0% |
| ! | ATATATCTTGTGCGTATTTA+TGG | + | chr1.4:3529695-3529714 | MS.gene062781:intron | 25.0% |
| ! | ATCTTGATCATATCAAAGTA+TGG | - | chr1.4:3527245-3527264 | None:intergenic | 25.0% |
| ! | ATTCAAAATTGCATGTTTAG+AGG | + | chr1.4:3530160-3530179 | MS.gene062781:CDS | 25.0% |
| ! | ATTGTATATTTGCATTATGG+AGG | + | chr1.4:3527263-3527282 | MS.gene062781:intron | 25.0% |
| ! | GAAAATGAAAGAGAAGTTAT+AGG | - | chr1.4:3527294-3527313 | None:intergenic | 25.0% |
| ! | GAGGATATATCTTATTGAAA+AGG | + | chr1.4:3527441-3527460 | MS.gene062781:intron | 25.0% |
| ! | GAGGTGATTAATGTAAAATT+TGG | + | chr1.4:3528963-3528982 | MS.gene062781:intron | 25.0% |
| ! | TCATGTTATTAGAAATGTCT+TGG | + | chr1.4:3529073-3529092 | MS.gene062781:intron | 25.0% |
| ! | TCTTGATCATATCAAAGTAT+GGG | - | chr1.4:3527244-3527263 | None:intergenic | 25.0% |
| ! | TTGTATATTTGCATTATGGA+GGG | + | chr1.4:3527264-3527283 | MS.gene062781:intron | 25.0% |
| ! | TTTCAAATTTATGTATCACC+TGG | - | chr1.4:3529835-3529854 | None:intergenic | 25.0% |
| !! | ATAGATTTTATATTCGGACA+AGG | + | chr1.4:3527478-3527497 | MS.gene062781:intron | 25.0% |
| !! | CAATTTATGAAGTACTATTG+TGG | + | chr1.4:3529045-3529064 | MS.gene062781:intron | 25.0% |
| !! | GTTTCTCTAATAGTTTTCTT+AGG | - | chr1.4:3528131-3528150 | None:intergenic | 25.0% |
| !!! | ACTGTCACTTCTATTATTTT+TGG | + | chr1.4:3526998-3527017 | MS.gene062781:intron | 25.0% |
| !!! | ATCAGTTGTTTTATCTGTTA+AGG | + | chr1.4:3529547-3529566 | MS.gene062781:intron | 25.0% |
| !!! | TTGAAGTATTAGGTGAATTT+TGG | - | chr1.4:3528989-3529008 | None:intergenic | 25.0% |
| !!! | TTTATTCATGCTTTGAAAGT+TGG | + | chr1.4:3527812-3527831 | MS.gene062781:intron | 25.0% |
| AAAAATTGAGGGAGTGATTA+AGG | + | chr1.4:3526184-3526203 | MS.gene062781:CDS | 30.0% | |
| AAAATTGAGGGAGTGATTAA+GGG | + | chr1.4:3526185-3526204 | MS.gene062781:CDS | 30.0% | |
| AAATCTCCACTGTATAAAGT+AGG | + | chr1.4:3526610-3526629 | MS.gene062781:intron | 30.0% | |
| AAATTACCACAATCCTTTAC+CGG | - | chr1.4:3526227-3526246 | None:intergenic | 30.0% | |
| AAATTGCATGTTTAGAGGTT+TGG | + | chr1.4:3530165-3530184 | MS.gene062781:intron | 30.0% | |
| AAGATTAACGAAGTGAATCT+TGG | - | chr1.4:3526947-3526966 | None:intergenic | 30.0% | |
| AAGCATAAGTGTATTAAGCT+TGG | + | chr1.4:3528526-3528545 | MS.gene062781:intron | 30.0% | |
| AAGTTGAATTTAATGCTTCC+AGG | + | chr1.4:3530248-3530267 | MS.gene062781:intron | 30.0% | |
| AAGTTTGATACTCTATCCTA+TGG | - | chr1.4:3528596-3528615 | None:intergenic | 30.0% | |
| AATCAAACATCATTTACCTC+AGG | - | chr1.4:3526053-3526072 | None:intergenic | 30.0% | |
| AATCATTAAATTGGAGCTGT+TGG | + | chr1.4:3526781-3526800 | MS.gene062781:intron | 30.0% | |
| AATTCTACAAGTGTACTATC+CGG | - | chr1.4:3529181-3529200 | None:intergenic | 30.0% | |
| AGTTTAGCAAAGAAATCAAC+AGG | - | chr1.4:3528837-3528856 | None:intergenic | 30.0% | |
| ATACCTTCTCTATATAGAGA+AGG | - | chr1.4:3529995-3530014 | None:intergenic | 30.0% | |
| ATTACACTTTCAAAGCTTCT+AGG | - | chr1.4:3527141-3527160 | None:intergenic | 30.0% | |
| ATTTATGTATCACCTGGTTA+AGG | - | chr1.4:3529829-3529848 | None:intergenic | 30.0% | |
| ATTTCAATTCCTGGAATTTC+TGG | + | chr1.4:3530753-3530772 | MS.gene062781:CDS | 30.0% | |
| CAAAACAAGAAGACAAAAGA+AGG | + | chr1.4:3529878-3529897 | MS.gene062781:intron | 30.0% | |
| CAGAAAAGTAAGATCAATGT+CGG | - | chr1.4:3526873-3526892 | None:intergenic | 30.0% | |
| GAATCTAATTGACATCAGTA+TGG | - | chr1.4:3528771-3528790 | None:intergenic | 30.0% | |
| GCATAAAAAGGATTTGAATC+AGG | - | chr1.4:3530294-3530313 | None:intergenic | 30.0% | |
| GCGATAATCTTCAAAAATCT+AGG | + | chr1.4:3527180-3527199 | MS.gene062781:intron | 30.0% | |
| GGAACTATGTAAGGTAAATA+CGG | + | chr1.4:3528500-3528519 | MS.gene062781:intron | 30.0% | |
| GTCAATCAATTCGATCTTAA+AGG | - | chr1.4:3529026-3529045 | None:intergenic | 30.0% | |
| GTCAATTAGATTCTTGTAGA+TGG | + | chr1.4:3528778-3528797 | MS.gene062781:intron | 30.0% | |
| GTTATAGTTATTGTTTAGGG+TGG | + | chr1.4:3526161-3526180 | MS.gene062781:intron | 30.0% | |
| GTTCTATCAAAGACCATATT+TGG | - | chr1.4:3528188-3528207 | None:intergenic | 30.0% | |
| TAAAAAGGATTTGAATCAGG+AGG | - | chr1.4:3530291-3530310 | None:intergenic | 30.0% | |
| TACAACGACACTCTTAATAT+GGG | + | chr1.4:3526635-3526654 | MS.gene062781:intron | 30.0% | |
| TATAAGTCCATCATGTATTG+TGG | + | chr1.4:3527051-3527070 | MS.gene062781:intron | 30.0% | |
| TCTTTGATAGAACATTATGG+CGG | + | chr1.4:3528195-3528214 | MS.gene062781:intron | 30.0% | |
| TGCATCATAACAAAACAAAC+AGG | - | chr1.4:3529917-3529936 | None:intergenic | 30.0% | |
| TGGTCTTTGATAGAACATTA+TGG | + | chr1.4:3528192-3528211 | MS.gene062781:intron | 30.0% | |
| TGTAATCCTACTTTATACAG+TGG | - | chr1.4:3526619-3526638 | None:intergenic | 30.0% | |
| TTACAACGACACTCTTAATA+TGG | + | chr1.4:3526634-3526653 | MS.gene062781:intron | 30.0% | |
| TTTCATGACAACACTGAATT+TGG | - | chr1.4:3526746-3526765 | None:intergenic | 30.0% | |
| TTTCCAAAACCAGCATAAAA+AGG | - | chr1.4:3530306-3530325 | None:intergenic | 30.0% | |
| TTTCCTTCTCTATATAGAGA+AGG | + | chr1.4:3529989-3530008 | MS.gene062781:CDS | 30.0% | |
| TTTCTCTTACAAGCACAATA+GGG | + | chr1.4:3527666-3527685 | MS.gene062781:intron | 30.0% | |
| ! | AGTTTTCTTTCTTTCCGTAT+GGG | - | chr1.4:3525955-3525974 | None:intergenic | 30.0% |
| ! | ATAGAGTATCAAACTTAGTC+TGG | + | chr1.4:3528600-3528619 | MS.gene062781:intron | 30.0% |
| ! | ATCCTTTTATTGTTCCATTC+TGG | + | chr1.4:3528941-3528960 | MS.gene062781:intron | 30.0% |
| ! | CATGATTTTCTGTAATTGGA+TGG | + | chr1.4:3528467-3528486 | MS.gene062781:intron | 30.0% |
| ! | CATTTTTCTCACATATGACA+CGG | + | chr1.4:3528017-3528036 | MS.gene062781:intron | 30.0% |
| ! | CTGTCATGATTTTCTGTAAT+TGG | + | chr1.4:3528463-3528482 | MS.gene062781:intron | 30.0% |
| ! | CTTAAGGTAACTGATTTCAT+CGG | - | chr1.4:3530337-3530356 | None:intergenic | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | - | chr1.4:3528153-3528172 | None:intergenic | 30.0% |
| ! | GATTCAAATCCTTTTTATGC+TGG | + | chr1.4:3530294-3530313 | MS.gene062781:CDS | 30.0% |
| ! | TAGCATTCACTGATAATGAT+TGG | + | chr1.4:3528889-3528908 | MS.gene062781:intron | 30.0% |
| ! | TTGCTTTGTATTTTCACCAT+AGG | + | chr1.4:3528577-3528596 | MS.gene062781:intron | 30.0% |
| ! | TTTTGATGAACTTTCCCATA+CGG | + | chr1.4:3525938-3525957 | MS.gene062781:CDS | 30.0% |
| !! | CAATACATGATGGACTTATA+AGG | - | chr1.4:3527051-3527070 | None:intergenic | 30.0% |
| !! | TTGTGGTAATTTTGATGTTG+CGG | + | chr1.4:3526235-3526254 | MS.gene062781:CDS | 30.0% |
| !!! | AATCCTTTTTATGCTGGTTT+TGG | + | chr1.4:3530300-3530319 | MS.gene062781:CDS | 30.0% |
| !!! | TGGTCACTTTTAAGATGATA+AGG | + | chr1.4:3529093-3529112 | MS.gene062781:intron | 30.0% |
| !!! | TGTTTGTTTTGTTATGATGC+AGG | + | chr1.4:3529916-3529935 | MS.gene062781:intron | 30.0% |
| AAACCAGAAGATTGTTAGTG+TGG | - | chr1.4:3529669-3529688 | None:intergenic | 35.0% | |
| AAATCTCGAACTGTCAACAT+TGG | + | chr1.4:3526284-3526303 | MS.gene062781:CDS | 35.0% | |
| AACCAGAAGATTGTTAGTGT+GGG | - | chr1.4:3529668-3529687 | None:intergenic | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | + | chr1.4:3528076-3528095 | MS.gene062781:intron | 35.0% | |
| AAGGGATTGTTCTGTTAAGA+AGG | + | chr1.4:3526310-3526329 | MS.gene062781:CDS | 35.0% | |
| AAGGTTGAATAGGAATTGTC+TGG | - | chr1.4:3529810-3529829 | None:intergenic | 35.0% | |
| AATAGACATGACACACTCTA+AGG | - | chr1.4:3527904-3527923 | None:intergenic | 35.0% | |
| ACAACACTGAATTTGGATTC+AGG | - | chr1.4:3526739-3526758 | None:intergenic | 35.0% | |
| ACGGAAAGAAAGAAAACTCA+GGG | + | chr1.4:3525957-3525976 | MS.gene062781:CDS | 35.0% | |
| AGAATTAAGCTCCAGAACAA+AGG | - | chr1.4:3529255-3529274 | None:intergenic | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | + | chr1.4:3528160-3528179 | MS.gene062781:intron | 35.0% | |
| AGCCTAGTTAGATAAAAACG+AGG | - | chr1.4:3526669-3526688 | None:intergenic | 35.0% | |
| ATAGTGATATCAGATGTGGA+TGG | + | chr1.4:3527404-3527423 | MS.gene062781:CDS | 35.0% | |
| ATAGTGCTAATGAGATACTG+AGG | + | chr1.4:3528356-3528375 | MS.gene062781:intron | 35.0% | |
| ATATGAGAGACTCATTACCT+TGG | - | chr1.4:3530397-3530416 | None:intergenic | 35.0% | |
| ATCATGAGAACAGGGTAAAT+AGG | + | chr1.4:3527601-3527620 | MS.gene062781:intron | 35.0% | |
| ATCATGCAGATTGAATTCTG+GGG | - | chr1.4:3529146-3529165 | None:intergenic | 35.0% | |
| ATTCCTATTCAACCTTAACC+AGG | + | chr1.4:3529814-3529833 | MS.gene062781:CDS | 35.0% | |
| CACTCTTAATATGGGAGAAT+TGG | + | chr1.4:3526643-3526662 | MS.gene062781:intron | 35.0% | |
| CACTTGAAGAAAACTAGACA+TGG | + | chr1.4:3528310-3528329 | MS.gene062781:intron | 35.0% | |
| CATCATGCAGATTGAATTCT+GGG | - | chr1.4:3529147-3529166 | None:intergenic | 35.0% | |
| CCTAATTGAGGAACTATGTA+AGG | + | chr1.4:3528491-3528510 | MS.gene062781:intron | 35.0% | |
| CCTTACATAGTTCCTCAATT+AGG | - | chr1.4:3528494-3528513 | None:intergenic | 35.0% | |
| CGATGAAATCAGTTACCTTA+AGG | + | chr1.4:3530335-3530354 | MS.gene062781:CDS | 35.0% | |
| CTCCAGAATGGAACAATAAA+AGG | - | chr1.4:3528946-3528965 | None:intergenic | 35.0% | |
| GAAATCAGTTACCTTAAGGT+TGG | + | chr1.4:3530339-3530358 | MS.gene062781:CDS | 35.0% | |
| GAGAAAGTCAAGTTTGAATC+TGG | + | chr1.4:3525996-3526015 | MS.gene062781:CDS | 35.0% | |
| GAGTTTGACATATGTAAGAC+TGG | + | chr1.4:3529118-3529137 | MS.gene062781:intron | 35.0% | |
| GATAGAAAATTCCAAGGTCT+AGG | - | chr1.4:3527213-3527232 | None:intergenic | 35.0% | |
| GGTAAGAAGAGTAGATCAAA+TGG | + | chr1.4:3528073-3528092 | MS.gene062781:intron | 35.0% | |
| GTCAATTCATGCCTTTAGTT+GGG | + | chr1.4:3529340-3529359 | MS.gene062781:CDS | 35.0% | |
| GTCATATATATGGAGAGAGA+TGG | - | chr1.4:3530674-3530693 | None:intergenic | 35.0% | |
| GTTTCTCTTACAAGCACAAT+AGG | + | chr1.4:3527665-3527684 | MS.gene062781:intron | 35.0% | |
| TAATTGGATGGTCCTAATTG+AGG | + | chr1.4:3528479-3528498 | MS.gene062781:intron | 35.0% | |
| TACATTAATCACCTCCAGAA+TGG | - | chr1.4:3528958-3528977 | None:intergenic | 35.0% | |
| TACGGAAAGAAAGAAAACTC+AGG | + | chr1.4:3525956-3525975 | MS.gene062781:CDS | 35.0% | |
| TAGACATGACTACATGAGAA+CGG | - | chr1.4:3530472-3530491 | None:intergenic | 35.0% | |
| TAGTGATATCAGATGTGGAT+GGG | + | chr1.4:3527405-3527424 | MS.gene062781:CDS | 35.0% | |
| TATGAGAGACTCATTACCTT+GGG | - | chr1.4:3530396-3530415 | None:intergenic | 35.0% | |
| TCATCATGCAGATTGAATTC+TGG | - | chr1.4:3529148-3529167 | None:intergenic | 35.0% | |
| TCATGAGAACAGGGTAAATA+GGG | + | chr1.4:3527602-3527621 | MS.gene062781:intron | 35.0% | |
| TCATTATCAGTGAATGCTAC+TGG | - | chr1.4:3528888-3528907 | None:intergenic | 35.0% | |
| TCCATATATATGACGTCACA+AGG | + | chr1.4:3530680-3530699 | MS.gene062781:intron | 35.0% | |
| TCCTTGTGACGTCATATATA+TGG | - | chr1.4:3530684-3530703 | None:intergenic | 35.0% | |
| TCGTATAGTGATATCAGATG+TGG | + | chr1.4:3527400-3527419 | MS.gene062781:CDS | 35.0% | |
| TGGATGTTAAAAATGGTTGC+AGG | - | chr1.4:3529224-3529243 | None:intergenic | 35.0% | |
| TGTCTATTTCAAACCCAACA+AGG | + | chr1.4:3527916-3527935 | MS.gene062781:intron | 35.0% | |
| TGTTTCTCTACACCTATGAT+GGG | + | chr1.4:3526407-3526426 | MS.gene062781:CDS | 35.0% | |
| TTCTCATGTAGTCATGTCTA+AGG | + | chr1.4:3530472-3530491 | MS.gene062781:intron | 35.0% | |
| TTGATCTACTCTTCTTACCA+CGG | - | chr1.4:3528072-3528091 | None:intergenic | 35.0% | |
| ! | ATTTGAGTATCGTCATTGCT+AGG | + | chr1.4:3530220-3530239 | MS.gene062781:intron | 35.0% |
| ! | ATTTTGTGTCTAAGCAACGT+CGG | - | chr1.4:3530521-3530540 | None:intergenic | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr1.4:3528172-3528191 | MS.gene062781:intron | 35.0% |
| ! | CATGCAATTTTGAATTCGTG+AGG | - | chr1.4:3530155-3530174 | None:intergenic | 35.0% |
| ! | CTTTTATTGTTCCATTCTGG+AGG | + | chr1.4:3528944-3528963 | MS.gene062781:intron | 35.0% |
| ! | GAGTTTTCTTTCTTTCCGTA+TGG | - | chr1.4:3525956-3525975 | None:intergenic | 35.0% |
| ! | GCTTGGAGTATATATGCTTT+TGG | + | chr1.4:3528543-3528562 | MS.gene062781:intron | 35.0% |
| ! | GTTTAGGGTGGAAAAATTGA+GGG | + | chr1.4:3526173-3526192 | MS.gene062781:intron | 35.0% |
| ! | TAGTCATGTCTAAGGTTTCA+GGG | + | chr1.4:3530480-3530499 | MS.gene062781:intron | 35.0% |
| ! | TGTTGACAGTTCGAGATTTT+TGG | - | chr1.4:3526283-3526302 | None:intergenic | 35.0% |
| ! | TGTTTAGGGTGGAAAAATTG+AGG | + | chr1.4:3526172-3526191 | MS.gene062781:intron | 35.0% |
| !! | AATTTTGATGTTGCGGATGT+TGG | + | chr1.4:3526242-3526261 | MS.gene062781:CDS | 35.0% |
| !! | ATCTTTGAGATCATGAGAAC+AGG | + | chr1.4:3527592-3527611 | MS.gene062781:intron | 35.0% |
| !! | CGACATTGATCTTACTTTTC+TGG | + | chr1.4:3526871-3526890 | MS.gene062781:intron | 35.0% |
| !! | CTCGGATATTTTTGTGGAAA+TGG | + | chr1.4:3527372-3527391 | MS.gene062781:CDS | 35.0% |
| !! | CTGAAAAGTGTGTTCTGTTT+TGG | + | chr1.4:3526122-3526141 | MS.gene062781:intron | 35.0% |
| !! | GTTTTGTTATGATGCAGGAT+GGG | + | chr1.4:3529921-3529940 | MS.gene062781:intron | 35.0% |
| !! | TCGTTTTTATCTAACTAGGC+TGG | + | chr1.4:3526668-3526687 | MS.gene062781:intron | 35.0% |
| !! | TCTTTGAGATCATGAGAACA+GGG | + | chr1.4:3527593-3527612 | MS.gene062781:intron | 35.0% |
| !! | TGTTGTTGTTGTTGATGACA+CGG | + | chr1.4:3528264-3528283 | MS.gene062781:intron | 35.0% |
| !! | TGTTTTGTTATGATGCAGGA+TGG | + | chr1.4:3529920-3529939 | MS.gene062781:intron | 35.0% |
| !! | TTGATGCTCGGATATTTTTG+TGG | + | chr1.4:3527366-3527385 | MS.gene062781:CDS | 35.0% |
| !! | TTGGCAAAAGTACTTCTCTT+GGG | + | chr1.4:3526477-3526496 | MS.gene062781:intron | 35.0% |
| !! | TTTGGCAAAAGTACTTCTCT+TGG | + | chr1.4:3526476-3526495 | MS.gene062781:intron | 35.0% |
| !!! | TCTCTTGTTTTATGTGTTGC+AGG | + | chr1.4:3529304-3529323 | MS.gene062781:intron | 35.0% |
| AACTGTCAACATTGGTCGAA+GGG | + | chr1.4:3526292-3526311 | MS.gene062781:CDS | 40.0% | |
| AAGTCCATCATGTATTGTGG+AGG | + | chr1.4:3527054-3527073 | MS.gene062781:intron | 40.0% | |
| ACTACATGAGAACGGAAGTT+TGG | - | chr1.4:3530464-3530483 | None:intergenic | 40.0% | |
| ACTGTCATCCTTGAATCTGA+AGG | + | chr1.4:3526361-3526380 | MS.gene062781:CDS | 40.0% | |
| AGTCAAGTTTGAATCTGGCA+AGG | + | chr1.4:3526001-3526020 | MS.gene062781:CDS | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | + | chr1.4:3528101-3528120 | MS.gene062781:intron | 40.0% | |
| AGTCCATCATGTATTGTGGA+GGG | + | chr1.4:3527055-3527074 | MS.gene062781:intron | 40.0% | |
| ATAGATTTGTATTGGGGCCA+AGG | + | chr1.4:3525835-3525854 | MS.gene062781:CDS | 40.0% | |
| ATCCGATTCTCTTAAGAGCA+GGG | - | chr1.4:3528407-3528426 | None:intergenic | 40.0% | |
| ATCTTACCTTTCTCTCGAAG+AGG | + | chr1.4:3526962-3526981 | MS.gene062781:intron | 40.0% | |
| ATGGCATGGATATTCCTTGT+TGG | - | chr1.4:3527933-3527952 | None:intergenic | 40.0% | |
| ATGTGGATGGGACTATTACA+AGG | + | chr1.4:3527417-3527436 | MS.gene062781:CDS | 40.0% | |
| CAGCCAAGTTGTTGGATTTA+AGG | + | chr1.4:3525898-3525917 | MS.gene062781:CDS | 40.0% | |
| CATAGGTGTAGAGAAACAGA+AGG | - | chr1.4:3526405-3526424 | None:intergenic | 40.0% | |
| CATCCTTGAATCTGAAGGAA+GGG | + | chr1.4:3526366-3526385 | MS.gene062781:CDS | 40.0% | |
| CCAAGTTGTTGGATTTAAGG+TGG | + | chr1.4:3525901-3525920 | MS.gene062781:CDS | 40.0% | |
| CCACCTTAAATCCAACAACT+TGG | - | chr1.4:3525904-3525923 | None:intergenic | 40.0% | |
| CCAGATATATGCCTTTGTTC+TGG | + | chr1.4:3529241-3529260 | MS.gene062781:intron | 40.0% | |
| CTTAAGGTTGGAATCGCTAA+AGG | + | chr1.4:3530351-3530370 | MS.gene062781:CDS | 40.0% | |
| CTTTAGCGATTCCAACCTTA+AGG | - | chr1.4:3530353-3530372 | None:intergenic | 40.0% | |
| GAAATTACAACAGGACCATC+TGG | - | chr1.4:3529956-3529975 | None:intergenic | 40.0% | |
| GACTGATTACAATGAGTGCA+TGG | + | chr1.4:3526896-3526915 | MS.gene062781:intron | 40.0% | |
| GATGACAGTTGTTCAGAAGT+TGG | - | chr1.4:3526350-3526369 | None:intergenic | 40.0% | |
| GCATGATGATAGATGAACTC+CGG | + | chr1.4:3529159-3529178 | MS.gene062781:intron | 40.0% | |
| GGTCAATTCATGCCTTTAGT+TGG | + | chr1.4:3529339-3529358 | MS.gene062781:CDS | 40.0% | |
| GTTGAAATATTGACACCGAG+TGG | + | chr1.4:3527868-3527887 | MS.gene062781:intron | 40.0% | |
| GTTTCTCTACACCTATGATG+GGG | + | chr1.4:3526408-3526427 | MS.gene062781:CDS | 40.0% | |
| TAAGGAACCATTGATCCACT+CGG | - | chr1.4:3527886-3527905 | None:intergenic | 40.0% | |
| TAGAGAGATTCATCATGGCA+TGG | - | chr1.4:3527947-3527966 | None:intergenic | 40.0% | |
| TAGGATTAACTCCTAGACCT+TGG | + | chr1.4:3527199-3527218 | MS.gene062781:intron | 40.0% | |
| TATCCGATTCTCTTAAGAGC+AGG | - | chr1.4:3528408-3528427 | None:intergenic | 40.0% | |
| TCACCTGGTTAAGGTTGAAT+AGG | - | chr1.4:3529820-3529839 | None:intergenic | 40.0% | |
| TCATCCTTGAATCTGAAGGA+AGG | + | chr1.4:3526365-3526384 | MS.gene062781:CDS | 40.0% | |
| TGATCTAGAGATACCGGTAA+AGG | + | chr1.4:3526211-3526230 | MS.gene062781:CDS | 40.0% | |
| TGGCATGGATATTCCTTGTT+GGG | - | chr1.4:3527932-3527951 | None:intergenic | 40.0% | |
| TTAATGCTTCCAGGACATCA+GGG | + | chr1.4:3530257-3530276 | MS.gene062781:intron | 40.0% | |
| TTCCACACATCACAGGAAAA+TGG | + | chr1.4:3529734-3529753 | MS.gene062781:intron | 40.0% | |
| TTCCCTGCTCTTAAGAGAAT+CGG | + | chr1.4:3528402-3528421 | MS.gene062781:intron | 40.0% | |
| TTTAATGCTTCCAGGACATC+AGG | + | chr1.4:3530256-3530275 | MS.gene062781:intron | 40.0% | |
| TTTCCTGTGATGTGTGGAAT+AGG | - | chr1.4:3529733-3529752 | None:intergenic | 40.0% | |
| ! | CCAGAACAAAGGCATATATC+TGG | - | chr1.4:3529244-3529263 | None:intergenic | 40.0% |
| ! | CTGTTTCTCTACACCTATGA+TGG | + | chr1.4:3526406-3526425 | MS.gene062781:CDS | 40.0% |
| ! | GAAAACTCAGGGTGTTAACT+TGG | + | chr1.4:3525968-3525987 | MS.gene062781:CDS | 40.0% |
| ! | GTAGTCATGTCTAAGGTTTC+AGG | + | chr1.4:3530479-3530498 | MS.gene062781:intron | 40.0% |
| !! | AGCTCTAGAGAGATTCATCA+TGG | - | chr1.4:3527952-3527971 | None:intergenic | 40.0% |
| !! | GAGCACTGAGAAAAAGTATC+TGG | - | chr1.4:3529763-3529782 | None:intergenic | 40.0% |
| !! | GGCCTCGTTTTTATCTAACT+AGG | + | chr1.4:3526664-3526683 | MS.gene062781:intron | 40.0% |
| !! | TGAATGCTACTGGCTAGTTT+AGG | - | chr1.4:3528878-3528897 | None:intergenic | 40.0% |
| ACCAATGTTCAGCAAGCACA+AGG | - | chr1.4:3530724-3530743 | None:intergenic | 45.0% | |
| ACTATAGAAGGGGAAGAGTG+AGG | - | chr1.4:3530046-3530065 | None:intergenic | 45.0% | |
| AGAAGATTGTTAGTGTGGGC+AGG | - | chr1.4:3529664-3529683 | None:intergenic | 45.0% | |
| AGAAGGAAAAAGTCCGTCAG+GGG | - | chr1.4:3529978-3529997 | None:intergenic | 45.0% | |
| AGAGAAGGAAAAAGTCCGTC+AGG | - | chr1.4:3529980-3529999 | None:intergenic | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | + | chr1.4:3528085-3528104 | MS.gene062781:intron | 45.0% | |
| ATTGACACCGAGTGGATCAA+TGG | + | chr1.4:3527876-3527895 | MS.gene062781:intron | 45.0% | |
| CATCCCTCCACAATACATGA+TGG | - | chr1.4:3527061-3527080 | None:intergenic | 45.0% | |
| CCAATGTTCAGCAAGCACAA+GGG | - | chr1.4:3530723-3530742 | None:intergenic | 45.0% | |
| CCTGTTGTAATTTCCCCTGA+CGG | + | chr1.4:3529962-3529981 | MS.gene062781:CDS | 45.0% | |
| CGTAAACCTCTTCGAGAGAA+AGG | - | chr1.4:3526971-3526990 | None:intergenic | 45.0% | |
| CTAACTGACAGCTCTCATCT+AGG | - | chr1.4:3527725-3527744 | None:intergenic | 45.0% | |
| CTAGATGAGAGCTGTCAGTT+AGG | + | chr1.4:3527723-3527742 | MS.gene062781:intron | 45.0% | |
| CTGCGTGTTCTTAAAACACG+TGG | + | chr1.4:3529510-3529529 | MS.gene062781:intron | 45.0% | |
| GAACTGTCAACATTGGTCGA+AGG | + | chr1.4:3526291-3526310 | MS.gene062781:CDS | 45.0% | |
| GAAGATTGTTAGTGTGGGCA+GGG | - | chr1.4:3529663-3529682 | None:intergenic | 45.0% | |
| GACCAGTCAATCCCAACTAA+AGG | - | chr1.4:3529354-3529373 | None:intergenic | 45.0% | |
| GAGAAGGAAAAAGTCCGTCA+GGG | - | chr1.4:3529979-3529998 | None:intergenic | 45.0% | |
| GAGATACCGGTAAAGGATTG+TGG | + | chr1.4:3526218-3526237 | MS.gene062781:CDS | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | + | chr1.4:3528095-3528114 | MS.gene062781:intron | 45.0% | |
| GATGGGAAAGTCTTACCAGA+TGG | + | chr1.4:3529938-3529957 | MS.gene062781:CDS | 45.0% | |
| GATGGGACTATTACAAGGTG+AGG | + | chr1.4:3527422-3527441 | MS.gene062781:intron | 45.0% | |
| TCATGTATTGTGGAGGGATG+TGG | + | chr1.4:3527061-3527080 | MS.gene062781:intron | 45.0% | |
| TCTCCCTTCCTTCAGATTCA+AGG | - | chr1.4:3526372-3526391 | None:intergenic | 45.0% | |
| TCTCTTCATGCTCTCGTGAA+CGG | + | chr1.4:3530549-3530568 | MS.gene062781:CDS | 45.0% | |
| TGCAGGAGGATTTCAATTCC+TGG | + | chr1.4:3530744-3530763 | MS.gene062781:intron | 45.0% | |
| TGCCCACACTAACAATCTTC+TGG | + | chr1.4:3529663-3529682 | MS.gene062781:intron | 45.0% | |
| TGCCTTTAGTTGGGATTGAC+TGG | + | chr1.4:3529349-3529368 | MS.gene062781:CDS | 45.0% | |
| TGTGATGTGTGGAATAGGCA+AGG | - | chr1.4:3529728-3529747 | None:intergenic | 45.0% | |
| TTGCCTATTCCACACATCAC+AGG | + | chr1.4:3529727-3529746 | MS.gene062781:intron | 45.0% | |
| ! | TCAGGGTGTTAACTTGGACA+AGG | + | chr1.4:3525974-3525993 | MS.gene062781:CDS | 45.0% |
| !! | AGCCATTTTCCTGTGATGTG+TGG | - | chr1.4:3529739-3529758 | None:intergenic | 45.0% |
| !! | GGGTGTTGATCTAGAGATAC+CGG | + | chr1.4:3526205-3526224 | MS.gene062781:CDS | 45.0% |
| ACCGCCTTATCCCACTAAGT+GGG | - | chr1.4:3528242-3528261 | None:intergenic | 50.0% | |
| ACCTGCTCAGATGAGTCTGT+AGG | - | chr1.4:3530585-3530604 | None:intergenic | 50.0% | |
| CAGTGCTCGTGCAATTTCTC+AGG | + | chr1.4:3529775-3529794 | MS.gene062781:CDS | 50.0% | |
| CCGTCAGGGGAAATTACAAC+AGG | - | chr1.4:3529965-3529984 | None:intergenic | 50.0% | |
| CCTGCTCAGATGAGTCTGTA+GGG | - | chr1.4:3530584-3530603 | None:intergenic | 50.0% | |
| CTGCTCAGATGAGTCTGTAG+GGG | - | chr1.4:3530583-3530602 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr1.4:3528237-3528256 | None:intergenic | 50.0% | |
| GGAGCTGTTGGATGAAGATC+AGG | + | chr1.4:3526793-3526812 | MS.gene062781:intron | 50.0% | |
| GGGCAACTTCCAGAAATTCC+AGG | - | chr1.4:3530765-3530784 | None:intergenic | 50.0% | |
| TACAACTGTGCAGCTACCTG+AGG | + | chr1.4:3526034-3526053 | MS.gene062781:CDS | 50.0% | |
| TCTTCTTACCACGGCGTCTA+CGG | - | chr1.4:3528063-3528082 | None:intergenic | 50.0% | |
| TGAATTCGTGAGGAGCTCTG+CGG | - | chr1.4:3530145-3530164 | None:intergenic | 50.0% | |
| TGAGGTTGCAGCCAAGTTGT+TGG | + | chr1.4:3525890-3525909 | MS.gene062781:CDS | 50.0% | |
| TGCTCAGATGAGTCTGTAGG+GGG | - | chr1.4:3530582-3530601 | None:intergenic | 50.0% | |
| TGTTAGTGTGGGCAGGGTAA+AGG | - | chr1.4:3529657-3529676 | None:intergenic | 50.0% | |
| TGTTGCAGGTCAGACGTTCT+AGG | + | chr1.4:3529318-3529337 | MS.gene062781:intron | 50.0% | |
| ! | CAGTGGTGATGCAGATTCAG+CGG | + | chr1.4:3525860-3525879 | MS.gene062781:CDS | 50.0% |
| ! | CCCTTGTGCTTGCTGAACAT+TGG | + | chr1.4:3530720-3530739 | MS.gene062781:intron | 50.0% |
| ! | CTACACCTATGATGGGGATG+CGG | + | chr1.4:3526414-3526433 | MS.gene062781:CDS | 50.0% |
| ! | GCTTGCTGAACATTGGTTGC+AGG | + | chr1.4:3530727-3530746 | MS.gene062781:intron | 50.0% |
| ! | TGCTGAACATTGGTTGCAGG+AGG | + | chr1.4:3530730-3530749 | MS.gene062781:intron | 50.0% |
| !! | GAAAAAGTGCCCTGATGTCC+TGG | - | chr1.4:3530269-3530288 | None:intergenic | 50.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr1.4:3528229-3528248 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr1.4:3528228-3528247 | MS.gene062781:intron | 55.0% | |
| CACCGCCTTATCCCACTAAG+TGG | - | chr1.4:3528243-3528262 | None:intergenic | 55.0% | |
| CCCCACTTAGTGGGATAAGG+CGG | + | chr1.4:3528238-3528257 | MS.gene062781:intron | 55.0% | |
| CCCTACAGACTCATCTGAGC+AGG | + | chr1.4:3530581-3530600 | MS.gene062781:CDS | 55.0% | |
| CCGCCTTATCCCACTAAGTG+GGG | - | chr1.4:3528241-3528260 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr1.4:3528235-3528254 | MS.gene062781:intron | 55.0% | |
| CGCTGAATCTGCATCACCAC+TGG | - | chr1.4:3525862-3525881 | None:intergenic | 55.0% | |
| CTTCTTACCACGGCGTCTAC+GGG | - | chr1.4:3528062-3528081 | None:intergenic | 55.0% | |
| GCTCAGATGAGTCTGTAGGG+GGG | - | chr1.4:3530581-3530600 | None:intergenic | 55.0% | |
| TAGCCTGTTTGCGCAGTGCT+TGG | + | chr1.4:3528643-3528662 | MS.gene062781:intron | 55.0% | |
| TCTGCATCACCACTGGACCT+TGG | - | chr1.4:3525855-3525874 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr1.4:3528229-3528248 | MS.gene062781:intron | 55.0% | |
| ! | AGACCAAGCACTGCGCAAAC+AGG | - | chr1.4:3528649-3528668 | None:intergenic | 55.0% |
| ! | GGGATTGACTGGTCACAGAC+AGG | + | chr1.4:3529360-3529379 | MS.gene062781:CDS | 55.0% |
| ACCTGCCGCATCCCCATCAT+AGG | - | chr1.4:3526422-3526441 | None:intergenic | 60.0% | |
| AGATTCAGCGGAGCGTGCTG+AGG | + | chr1.4:3525872-3525891 | MS.gene062781:CDS | 60.0% | |
| GTATTGGGGCCAAGGTCCAG+TGG | + | chr1.4:3525843-3525862 | MS.gene062781:CDS | 60.0% | |
| ! | ACCTATGATGGGGATGCGGC+AGG | + | chr1.4:3526418-3526437 | MS.gene062781:CDS | 60.0% |
| GAGAAGACCCGTAGACGCCG+TGG | + | chr1.4:3528052-3528071 | MS.gene062781:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 3525807 | 3530793 | 3525807 | ID=MS.gene062781 |
| chr1.4 | mRNA | 3525807 | 3530793 | 3525807 | ID=MS.gene062781.t1;Parent=MS.gene062781 |
| chr1.4 | exon | 3525807 | 3526055 | 3525807 | ID=MS.gene062781.t1.exon1;Parent=MS.gene062781.t1 |
| chr1.4 | CDS | 3525807 | 3526055 | 3525807 | ID=cds.MS.gene062781.t1;Parent=MS.gene062781.t1 |
| chr1.4 | exon | 3526179 | 3526439 | 3526179 | ID=MS.gene062781.t1.exon2;Parent=MS.gene062781.t1 |
| chr1.4 | CDS | 3526179 | 3526439 | 3526179 | ID=cds.MS.gene062781.t1;Parent=MS.gene062781.t1 |
| chr1.4 | exon | 3527365 | 3527438 | 3527365 | ID=MS.gene062781.t1.exon3;Parent=MS.gene062781.t1 |
| chr1.4 | CDS | 3527365 | 3527438 | 3527365 | ID=cds.MS.gene062781.t1;Parent=MS.gene062781.t1 |
| chr1.4 | exon | 3529326 | 3529410 | 3529326 | ID=MS.gene062781.t1.exon4;Parent=MS.gene062781.t1 |
| chr1.4 | CDS | 3529326 | 3529410 | 3529326 | ID=cds.MS.gene062781.t1;Parent=MS.gene062781.t1 |
| chr1.4 | exon | 3529749 | 3529835 | 3529749 | ID=MS.gene062781.t1.exon5;Parent=MS.gene062781.t1 |
| chr1.4 | CDS | 3529749 | 3529835 | 3529749 | ID=cds.MS.gene062781.t1;Parent=MS.gene062781.t1 |
| chr1.4 | exon | 3529938 | 3530010 | 3529938 | ID=MS.gene062781.t1.exon6;Parent=MS.gene062781.t1 |
| chr1.4 | CDS | 3529938 | 3530010 | 3529938 | ID=cds.MS.gene062781.t1;Parent=MS.gene062781.t1 |
| chr1.4 | exon | 3530138 | 3530181 | 3530138 | ID=MS.gene062781.t1.exon7;Parent=MS.gene062781.t1 |
| chr1.4 | CDS | 3530138 | 3530181 | 3530138 | ID=cds.MS.gene062781.t1;Parent=MS.gene062781.t1 |
| chr1.4 | exon | 3530270 | 3530398 | 3530270 | ID=MS.gene062781.t1.exon8;Parent=MS.gene062781.t1 |
| chr1.4 | CDS | 3530270 | 3530398 | 3530270 | ID=cds.MS.gene062781.t1;Parent=MS.gene062781.t1 |
| chr1.4 | exon | 3530501 | 3530602 | 3530501 | ID=MS.gene062781.t1.exon9;Parent=MS.gene062781.t1 |
| chr1.4 | CDS | 3530501 | 3530602 | 3530501 | ID=cds.MS.gene062781.t1;Parent=MS.gene062781.t1 |
| chr1.4 | exon | 3530749 | 3530793 | 3530749 | ID=MS.gene062781.t1.exon10;Parent=MS.gene062781.t1 |
| chr1.4 | CDS | 3530749 | 3530793 | 3530749 | ID=cds.MS.gene062781.t1;Parent=MS.gene062781.t1 |
| Gene Sequence |
| Protein sequence |
