AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene051935


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051935.t1 MTR_2g100130 92.615 501 28 4 1 493 1 500 0.0 932
MS.gene051935.t1 MTR_2g100130 90.802 511 28 4 1 493 1 510 0.0 930
MS.gene051935.t1 MTR_2g100130 90.447 492 28 4 1 474 1 491 0.0 891
MS.gene051935.t1 MTR_2g100130 90.447 492 27 5 1 474 1 490 0.0 886
MS.gene051935.t1 MTR_2g100130 89.936 467 28 4 1 449 1 466 0.0 839
MS.gene051935.t1 MTR_2g100130 92.117 444 19 2 66 493 28 471 0.0 824
MS.gene051935.t1 MTR_2g100130 95.466 397 18 0 97 493 5 401 0.0 795
MS.gene051935.t1 MTR_2g100130 91.765 425 18 3 66 474 28 451 0.0 780
MS.gene051935.t1 MTR_2g100160 80.332 422 77 3 74 492 1 419 0.0 686
MS.gene051935.t1 MTR_3g452710 85.366 328 47 1 166 493 223 549 0.0 595
MS.gene051935.t1 MTR_3g452710 84.894 331 49 1 163 493 153 482 0.0 595
MS.gene051935.t1 MTR_1g074880 43.295 261 140 5 198 457 26 279 5.71e-67 218
MS.gene051935.t1 MTR_1g074880 43.295 261 140 5 198 457 26 279 5.99e-67 218
MS.gene051935.t1 MTR_7g116380 44.177 249 131 5 210 457 38 279 6.42e-66 216
MS.gene051935.t1 MTR_7g116380 44.177 249 131 5 210 457 38 279 6.77e-66 216
MS.gene051935.t1 MTR_7g112870 40.214 281 159 6 179 457 8 281 1.02e-65 215
MS.gene051935.t1 MTR_8g005010 42.800 250 135 5 209 457 35 277 1.10e-65 214
MS.gene051935.t1 MTR_1g079950 42.972 249 134 5 210 457 38 279 2.25e-65 214
MS.gene051935.t1 MTR_1g079950 42.972 249 134 5 210 457 38 279 2.97e-65 214
MS.gene051935.t1 MTR_1g079950 42.972 249 134 5 210 457 38 279 3.03e-65 214
MS.gene051935.t1 MTR_1g079950 42.972 249 134 5 210 457 67 308 3.29e-65 215
MS.gene051935.t1 MTR_5g081230 43.775 249 132 5 210 457 55 296 3.81e-65 214
MS.gene051935.t1 MTR_8g098980 41.197 284 155 6 179 457 4 280 8.35e-65 213
MS.gene051935.t1 MTR_1g074880 47.321 224 114 4 235 457 4 224 2.03e-63 207
MS.gene051935.t1 MTR_1g074880 47.321 224 114 4 235 457 4 224 3.25e-63 207
MS.gene051935.t1 MTR_1g043240 40.000 265 151 5 194 457 22 279 6.06e-62 205
MS.gene051935.t1 MTR_1g079950 45.740 223 117 4 236 457 34 253 5.66e-61 202
MS.gene051935.t1 MTR_5g037200 42.915 247 134 6 231 475 49 290 1.22e-58 196
MS.gene051935.t1 MTR_8g062430 42.510 247 135 6 231 475 49 290 1.24e-58 196
MS.gene051935.t1 MTR_8g085610 42.913 254 135 7 231 479 27 275 1.70e-58 195
MS.gene051935.t1 MTR_8g085610 42.913 254 135 7 231 479 51 299 2.74e-58 195
MS.gene051935.t1 MTR_7g107310 42.520 254 136 7 231 479 56 304 5.83e-58 194
MS.gene051935.t1 MTR_5g093990 42.339 248 137 6 231 476 46 289 1.70e-55 187
MS.gene051935.t1 MTR_1g039380 41.176 255 141 6 207 459 1 248 2.06e-54 184
MS.gene051935.t1 MTR_1g039380 43.220 236 129 5 226 459 40 272 1.42e-53 182
MS.gene051935.t1 MTR_8g072600 32.609 368 187 10 175 481 70 437 4.55e-47 169
MS.gene051935.t1 MTR_2g087530 35.587 281 157 7 193 457 546 818 4.17e-45 169
MS.gene051935.t1 MTR_1g089370 37.091 275 149 8 198 456 548 814 6.47e-45 169
MS.gene051935.t1 MTR_2g087530 35.461 282 158 7 192 457 658 931 8.92e-45 169
MS.gene051935.t1 MTR_4g050540 35.357 280 161 7 192 457 663 936 9.27e-44 166
MS.gene051935.t1 MTR_8g072600 32.971 276 145 7 175 411 70 344 2.97e-34 132
MS.gene051935.t1 MTR_2g099710 30.110 362 169 16 178 481 177 512 4.26e-32 130
MS.gene051935.t1 MTR_5g037200 45.000 140 72 4 231 368 49 185 3.50e-30 117
MS.gene051935.t1 MTR_2g036980 83.077 65 10 1 1 65 1 64 6.84e-26 109
MS.gene051935.t1 MTR_5g037520 73.846 65 16 1 1 65 1 64 4.90e-19 89.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051935.t1 AT2G42810 73.713 369 95 2 126 493 117 484 0.0 572
MS.gene051935.t1 AT2G42810 73.713 369 95 2 126 493 117 484 0.0 572
MS.gene051935.t1 AT2G42810 73.713 369 95 2 126 493 117 484 0.0 572
MS.gene051935.t1 AT2G42810 79.819 332 66 1 162 493 207 537 0.0 572
MS.gene051935.t1 AT2G42810 80.060 331 65 1 163 493 209 538 0.0 571
MS.gene051935.t1 AT5G27840 44.094 254 134 5 205 457 39 285 6.17e-67 218
MS.gene051935.t1 AT5G27840 44.094 254 134 5 205 457 39 285 6.17e-67 218
MS.gene051935.t1 AT5G27840 44.094 254 134 5 205 457 39 285 6.61e-67 218
MS.gene051935.t1 AT5G27840 44.094 254 134 5 205 457 39 285 6.90e-67 218
MS.gene051935.t1 AT3G46820 40.070 287 158 6 178 457 10 289 9.84e-67 218
MS.gene051935.t1 AT5G59160 37.299 311 177 7 178 481 10 309 1.01e-65 215
MS.gene051935.t1 AT5G59160 37.299 311 177 7 178 481 10 309 1.01e-65 215
MS.gene051935.t1 AT5G59160 37.299 311 177 7 178 481 10 309 1.01e-65 215
MS.gene051935.t1 AT2G29400 41.065 263 148 4 198 460 43 298 1.73e-65 214
MS.gene051935.t1 AT3G05580 43.307 254 136 5 205 457 39 285 7.93e-65 213
MS.gene051935.t1 AT5G43380 42.520 254 138 5 205 457 33 279 8.31e-65 213
MS.gene051935.t1 AT5G43380 42.520 254 138 5 205 457 33 279 8.98e-65 213
MS.gene051935.t1 AT5G43380 42.520 254 138 5 205 457 33 279 9.45e-65 213
MS.gene051935.t1 AT2G39840 39.510 286 160 6 178 457 15 293 5.92e-63 208
MS.gene051935.t1 AT4G11240 42.126 254 139 5 205 457 34 280 1.44e-62 207
MS.gene051935.t1 AT1G64040 38.947 285 162 6 178 457 3 280 4.52e-62 206
MS.gene051935.t1 AT2G42500 42.913 254 135 7 231 479 56 304 2.96e-60 201
MS.gene051935.t1 AT1G10430 42.915 247 134 6 231 475 49 290 2.79e-59 197
MS.gene051935.t1 AT1G10430 42.915 247 134 6 231 475 49 290 2.79e-59 197
MS.gene051935.t1 AT1G59830 42.915 247 134 6 231 475 49 290 6.94e-59 197
MS.gene051935.t1 AT1G69960 37.884 293 171 7 185 475 8 291 2.08e-58 196
MS.gene051935.t1 AT3G58500 42.126 254 137 7 231 479 56 304 2.85e-58 195
MS.gene051935.t1 AT5G55260 36.877 301 180 7 185 483 4 296 1.06e-56 191
MS.gene051935.t1 AT4G26720 41.176 255 144 6 231 483 46 296 1.54e-56 191
MS.gene051935.t1 AT3G05580 43.636 220 116 5 205 423 39 251 2.52e-55 186
MS.gene051935.t1 AT1G50370 43.220 236 129 5 226 459 40 272 1.40e-53 182
MS.gene051935.t1 AT3G19980 42.373 236 131 5 226 459 40 272 4.20e-52 179
MS.gene051935.t1 AT5G63870 32.440 373 185 11 176 481 13 385 7.03e-51 179
MS.gene051935.t1 AT5G63870 32.440 373 185 11 176 481 13 385 7.03e-51 179
MS.gene051935.t1 AT1G03445 36.332 289 158 8 209 483 487 763 1.23e-50 185
MS.gene051935.t1 AT1G03445 36.332 289 158 8 209 483 487 763 1.36e-50 184
MS.gene051935.t1 AT5G55260 33.041 342 178 9 185 483 4 337 6.92e-50 174
MS.gene051935.t1 AT2G42500 39.759 249 141 6 236 479 13 257 1.34e-49 171
MS.gene051935.t1 AT1G59830 45.274 201 104 5 231 429 49 245 9.96e-49 169
MS.gene051935.t1 AT4G03080 39.918 243 126 7 231 457 579 817 2.57e-44 167
MS.gene051935.t1 AT2G27210 35.000 280 162 7 192 457 669 942 4.33e-42 161
MS.gene051935.t1 AT2G27210 35.000 280 162 7 192 457 664 937 4.69e-42 160
MS.gene051935.t1 AT1G08420 35.000 280 162 7 192 457 680 953 1.62e-41 159
MS.gene051935.t1 AT1G08420 35.000 280 162 7 192 457 675 948 1.80e-41 159
MS.gene051935.t1 AT1G48120 30.682 352 175 12 205 492 630 976 1.41e-36 144
MS.gene051935.t1 AT5G63870 30.634 284 153 6 176 415 13 296 1.04e-35 135
MS.gene051935.t1 AT5G10900 31.690 284 153 9 231 475 225 506 1.45e-32 131
MS.gene051935.t1 AT5G10900 31.690 284 153 9 231 475 225 506 1.86e-32 131
MS.gene051935.t1 AT5G10900 31.690 284 153 9 231 475 225 506 1.91e-32 131
MS.gene051935.t1 AT2G42500 42.478 113 62 2 226 335 51 163 3.55e-22 94.0
MS.gene051935.t1 AT2G42500 41.026 117 66 2 226 339 51 167 3.66e-22 94.0
MS.gene051935.t1 AT2G42500 42.478 113 62 2 226 335 51 163 5.21e-22 93.6

Find 87 sgRNAs with CRISPR-Local

Find 433 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTTGCTTGGTCCTCTTCC+AGG 0.183340 2.2:+2977641 None:intergenic
GCTCATTCACGCTGGATTAA+AGG 0.216746 2.2:-2980857 MS.gene051935:intron
GTTACCTGATCACAGTAATT+TGG 0.220828 2.2:+2977398 None:intergenic
TGCTGGAGTTGGGCTGTTCT+TGG 0.228121 2.2:+2980228 None:intergenic
AAGAGCATGAACAAGATATT+TGG 0.260261 2.2:-2978001 MS.gene051935:CDS
GAAAATCCATATCTATTTAA+TGG 0.277620 2.2:-2978617 MS.gene051935:CDS
TTCTTGAAGGATAATAATTT+AGG 0.289596 2.2:-2977575 MS.gene051935:intron
GCTTCAAATGTAATAATGTT+AGG 0.296688 2.2:+2977163 None:intergenic
GATGTCGAGCCACGATATTC+AGG 0.309442 2.2:-2980024 MS.gene051935:CDS
CTCAAATCCGATCAATTAAT+CGG 0.338994 2.2:-2977829 MS.gene051935:CDS
AGAAGGAGATACTATTACTT+TGG 0.348174 2.2:-2979992 MS.gene051935:CDS
TGACCCCATCAACACTAAAA+AGG 0.352827 2.2:+2977858 None:intergenic
CCTCTGCCCTTGGCCTTGCT+TGG 0.366159 2.2:-2983070 MS.gene051935:CDS
CTGCGAGTTGAGACAGAGTT+TGG 0.398712 2.2:+2983036 None:intergenic
ATAATGTTAGGTTTCAAATC+AGG 0.401417 2.2:+2977175 None:intergenic
TCACCTTTGAAACAAGGTTT+AGG 0.402886 2.2:+2982916 None:intergenic
AAGTCACCATTAAATAGATA+TGG 0.408912 2.2:+2978611 None:intergenic
AATGGTGACTTTGTAGATAG+AGG 0.410819 2.2:-2978599 MS.gene051935:CDS
TGCTCCAAATTACTGTGATC+AGG 0.411289 2.2:-2977402 MS.gene051935:intron
CAAATTTGTCAAAATGTTTG+CGG 0.411891 2.2:-2977945 MS.gene051935:CDS
GAAAATGATGAATGATTTCA+AGG 0.418810 2.2:-2979959 MS.gene051935:CDS
CACCCATCGCCACGCTTGCT+TGG 0.419484 2.2:+2977629 None:intergenic
CCAAGCAAGGCCAAGGGCAG+AGG 0.425105 2.2:+2983070 None:intergenic
CAAAGTTGCTATGTCTTCTC+CGG 0.426587 2.2:-2983103 None:intergenic
AGGTGCTTCAAATCGAATAA+AGG 0.429933 2.2:+2977195 None:intergenic
TTATGTGTCTTACCTTCATC+AGG 0.430537 2.2:+2977794 None:intergenic
TAAGCCATTGGCTTAACATC+AGG 0.430731 2.2:+2976668 None:intergenic
GGGCAGAGGAATTGTGTTGC+CGG 0.430749 2.2:+2983084 None:intergenic
TTGTTTATCACATGAGCTAA+AGG 0.446092 2.2:+2977905 None:intergenic
CAACACAATTCCTCTGCCCT+TGG 0.447193 2.2:-2983080 MS.gene051935:CDS
GGACCAAGCAAGCGTGGCGA+TGG 0.448883 2.2:-2977632 MS.gene051935:CDS
TATTCAGGATCAAGAATAGA+AGG 0.451241 2.2:-2980009 MS.gene051935:CDS
GGAAAACATGTTACTGTTTG+TGG 0.453376 2.2:-2979736 MS.gene051935:CDS
CCTCTTCCAGGGAGAGATTG+TGG 0.467154 2.2:+2977653 None:intergenic
TTGGTGAGGATGTTACAAAA+AGG 0.470459 2.2:-2977598 MS.gene051935:CDS
CACAAAACCGATTAATTGAT+CGG 0.472508 2.2:+2977822 None:intergenic
GGTTTAGGTAGCTGCGATGC+AGG 0.473200 2.2:+2982931 None:intergenic
TACATACAAGTGCTGGAGTT+GGG 0.482157 2.2:+2980218 None:intergenic
CAAGGCTTGAGCAAACATCT+TGG 0.488578 2.2:+2982975 None:intergenic
GAACAGAAGTGCTTGGATAG+AGG 0.488821 2.2:-2979937 MS.gene051935:CDS
TGGAGTGTTGTCATTGGCAT+TGG 0.496570 2.2:-2980885 MS.gene051935:CDS
TAAGAGATACATACAAGTGC+TGG 0.500612 2.2:+2980211 None:intergenic
GATGGTCGCATAAATCGAAC+AGG 0.503746 2.2:-2981074 MS.gene051935:intron
CACCGTTGCATCACAATCAA+AGG 0.506849 2.2:-2983001 MS.gene051935:CDS
GATGCGACCAAGCAAGGCCA+AGG 0.507282 2.2:+2983063 None:intergenic
GCTTGCTTGGTCCTCTTCCA+GGG 0.507675 2.2:+2977642 None:intergenic
CTACCTAAACCTTGTTTCAA+AGG 0.507677 2.2:-2982919 MS.gene051935:intron
GTATTGATTATGAGAACAAT+CGG 0.508663 2.2:+2976630 None:intergenic
AGGATCTGGAGTGTTGTCAT+TGG 0.509319 2.2:-2980891 MS.gene051935:CDS
TTTAAGTGCATGTCTCCATC+TGG 0.511692 2.2:-2978539 MS.gene051935:intron
AATATGAAATTAGATAAGAA+AGG 0.516073 2.2:-2980365 MS.gene051935:intron
CCACAATCTCTCCCTGGAAG+AGG 0.518654 2.2:-2977653 MS.gene051935:CDS
AACAGAAGTGCTTGGATAGA+GGG 0.518754 2.2:-2979936 MS.gene051935:intron
CATTATTACATTTGAAGCAG+TGG 0.519521 2.2:-2977158 MS.gene051935:intron
ATACATACAAGTGCTGGAGT+TGG 0.523075 2.2:+2980217 None:intergenic
TTTCAAGGAACAGAAGTGCT+TGG 0.526048 2.2:-2979944 MS.gene051935:CDS
GGTGTAGATGCGACCAAGCA+AGG 0.526293 2.2:+2983057 None:intergenic
ATATGAAATTAGATAAGAAA+GGG 0.533263 2.2:-2980364 MS.gene051935:intron
GACCAAGCAAGCGTGGCGAT+GGG 0.539781 2.2:-2977631 MS.gene051935:CDS
AAGTTGTTTGCATAAGCCAT+TGG 0.545433 2.2:+2976656 None:intergenic
TTGTGGCGATGTGCATGGTC+AGG 0.553831 2.2:-2979719 MS.gene051935:intron
GGTTGATGCATGACTTGCTA+TGG 0.557053 2.2:-2977682 MS.gene051935:CDS
ATTTCCTCTAGCTATATACA+TGG 0.570325 2.2:+2978033 None:intergenic
TGGCTATTGCTCATTCACGC+TGG 0.573120 2.2:-2980865 MS.gene051935:CDS
ACAGTTATGTCAACAAGAGA+AGG 0.573846 2.2:+2979766 None:intergenic
GTTGACATAACTGTTCCTCA+TGG 0.581296 2.2:-2979757 MS.gene051935:CDS
ATTTGCTCACCTTTGAAACA+AGG 0.585157 2.2:+2982910 None:intergenic
AGTGATCCACAATCTCTCCC+TGG 0.590132 2.2:-2977659 MS.gene051935:CDS
ACTGTTTGTGGCGATGTGCA+TGG 0.597060 2.2:-2979724 MS.gene051935:CDS
ATCTCATAAATCAAAGCACA+AGG 0.599543 2.2:-2977468 MS.gene051935:CDS
TTTATGCAGAAGGGTAACAA+AGG 0.604361 2.2:-2977220 MS.gene051935:intron
ACACCCTGATGTTAAGCCAA+TGG 0.605052 2.2:-2976672 MS.gene051935:CDS
GGAAGAGGACCAAGCAAGCG+TGG 0.607947 2.2:-2977638 MS.gene051935:CDS
ATTCTTGATCCTGAATATCG+TGG 0.608598 2.2:+2980015 None:intergenic
AAGCCATTGGCTTAACATCA+GGG 0.608784 2.2:+2976669 None:intergenic
GATGCGAAATATGATGATGA+TGG 0.610366 2.2:-2981092 MS.gene051935:CDS
TGTGTCTTACCTTCATCAGG+AGG 0.622526 2.2:+2977797 None:intergenic
AACCTTTGATTGTGATGCAA+CGG 0.623114 2.2:+2982999 None:intergenic
TCAGCCATGTATATAGCTAG+AGG 0.623458 2.2:-2978037 MS.gene051935:intron
ATTGGCTTAACATCAGGGTG+TGG 0.628926 2.2:+2976674 None:intergenic
AGAAAGGGAAGAAACATACA+AGG 0.642650 2.2:-2980349 MS.gene051935:CDS
TACAAGTACAAGAAGTATCG+AGG 0.660875 2.2:-2980324 MS.gene051935:CDS
CTTTGATTGTGATGCAACGG+TGG 0.667964 2.2:+2983002 None:intergenic
ATGCGACCAAGCAAGGCCAA+GGG 0.673982 2.2:+2983064 None:intergenic
GGTTATGAGATTCAACATGA+CGG 0.684432 2.2:-2977446 MS.gene051935:CDS
ATTGCACGAGTTAAACAACA+AGG 0.687961 2.2:+2982957 None:intergenic
TCTCATAAATCAAAGCACAA+GGG 0.729815 2.2:-2977467 MS.gene051935:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAGTTTACAAATTAATTAT+TGG - chr2.2:2977115-2977134 MS.gene051935:intron 10.0%
!! TAGTTTACAAATTAATTATT+GGG - chr2.2:2977116-2977135 MS.gene051935:intron 10.0%
!! TTGACTAAAAAAAAAAAAAT+GGG - chr2.2:2980610-2980629 MS.gene051935:intron 10.0%
!!! AAATATTTTTAACCTTTAAA+TGG - chr2.2:2978221-2978240 MS.gene051935:intron 10.0%
!!! ATATTTTATTAAAATTTGTC+AGG + chr2.2:2980814-2980833 None:intergenic 10.0%
!!! TGTTAGTTAATATTTTTTAT+GGG - chr2.2:2980443-2980462 MS.gene051935:intron 10.0%
!!! TTGTTAGTTAATATTTTTTA+TGG - chr2.2:2980442-2980461 MS.gene051935:intron 10.0%
!!! TTTTTTCCAAATAATTAATA+CGG + chr2.2:2981303-2981322 None:intergenic 10.0%
!! AAAAAAAAAACACTCTTATT+AGG - chr2.2:2978029-2978048 MS.gene051935:CDS 15.0%
!! AATATGAAATTAGATAAGAA+AGG - chr2.2:2979365-2979384 MS.gene051935:intron 15.0%
!! ATATAAGAAAAAATCAATGA+TGG + chr2.2:2980153-2980172 None:intergenic 15.0%
!! ATATGAAATTAGATAAGAAA+GGG - chr2.2:2979366-2979385 MS.gene051935:intron 15.0%
!! CATGAAAAATAAAATTGAAA+GGG + chr2.2:2981031-2981050 None:intergenic 15.0%
!! CTTGACTAAAAAAAAAAAAA+TGG - chr2.2:2980609-2980628 MS.gene051935:intron 15.0%
!! GTATTAATTATTTGGAAAAA+AGG - chr2.2:2981302-2981321 MS.gene051935:intron 15.0%
!! TAAGATATTTAACCTTTAAA+TGG - chr2.2:2978260-2978279 MS.gene051935:intron 15.0%
!! TATGAAAAACATAATAGTTA+TGG + chr2.2:2978522-2978541 None:intergenic 15.0%
!! TCATGAAAAATAAAATTGAA+AGG + chr2.2:2981032-2981051 None:intergenic 15.0%
!! TTAAAGGTTAAATATCTTAA+TGG + chr2.2:2978259-2978278 None:intergenic 15.0%
!!! AACAAAAATTTTAATTGACT+TGG + chr2.2:2978707-2978726 None:intergenic 15.0%
!!! AACTATTATGTTTTTCATAA+GGG - chr2.2:2978523-2978542 MS.gene051935:intron 15.0%
!!! AAGAAATAACAAAATTTTCA+AGG - chr2.2:2977500-2977519 MS.gene051935:intron 15.0%
!!! ATTTTAGAAACATATCTTAA+AGG + chr2.2:2978298-2978317 None:intergenic 15.0%
!!! ATTTTTACTAAAAATGGTAA+AGG - chr2.2:2980870-2980889 MS.gene051935:CDS 15.0%
!!! CTCTTGTTTATAATTTATTT+AGG + chr2.2:2978344-2978363 None:intergenic 15.0%
!!! GTTAGTTAATATTTTTTATG+GGG - chr2.2:2980444-2980463 MS.gene051935:intron 15.0%
!!! TAACTATTATGTTTTTCATA+AGG - chr2.2:2978522-2978541 MS.gene051935:intron 15.0%
!!! TTCTTTCTTGAATAATTTTA+CGG - chr2.2:2982376-2982395 MS.gene051935:intron 15.0%
!!! TTTTTCCAAATAATTAATAC+GGG + chr2.2:2981302-2981321 None:intergenic 15.0%
!!! TTTTTTCCTTAATTAGTTTA+TGG - chr2.2:2976924-2976943 MS.gene051935:intron 15.0%
!! AAAAATAAAATTGAAAGGGT+TGG + chr2.2:2981027-2981046 None:intergenic 20.0%
!! AAATGGAAATAAATTCAACA+AGG + chr2.2:2980966-2980985 None:intergenic 20.0%
!! AAGAATGTATAATATATGCA+GGG + chr2.2:2980744-2980763 None:intergenic 20.0%
!! AATAAATTAAGCATCTAATC+AGG + chr2.2:2981538-2981557 None:intergenic 20.0%
!! AATCAAATATCTCCATTTAA+AGG + chr2.2:2978275-2978294 None:intergenic 20.0%
!! AATCATATATCTCCATTTAA+AGG + chr2.2:2978236-2978255 None:intergenic 20.0%
!! ACATGTATAATCAGAATAAA+TGG + chr2.2:2980983-2981002 None:intergenic 20.0%
!! AGATTACCATAAACTAATTA+AGG + chr2.2:2976933-2976952 None:intergenic 20.0%
!! ATCATTATCAATAATGCATT+AGG - chr2.2:2979216-2979235 MS.gene051935:intron 20.0%
!! GAAAATCCATATCTATTTAA+TGG - chr2.2:2981113-2981132 MS.gene051935:CDS 20.0%
!! GAAATTAAGTATCAAACAAA+TGG + chr2.2:2982189-2982208 None:intergenic 20.0%
!! GTAAAATTATTCAAGAAAGA+AGG + chr2.2:2982377-2982396 None:intergenic 20.0%
!! TCAAAAATCTCAAATGAATT+AGG + chr2.2:2979181-2979200 None:intergenic 20.0%
!! TCTATAAACTATATGACTTA+CGG - chr2.2:2981352-2981371 MS.gene051935:intron 20.0%
!! TCTCAGAAAATGTATAAATA+TGG + chr2.2:2980897-2980916 None:intergenic 20.0%
!! TTATAGAATAGCAAGATAAT+AGG + chr2.2:2980258-2980277 None:intergenic 20.0%
!! TTATTCTGATTATACATGTT+TGG - chr2.2:2980984-2981003 MS.gene051935:intron 20.0%
!! TTCTTGAAGGATAATAATTT+AGG - chr2.2:2982155-2982174 MS.gene051935:intron 20.0%
!! TTTGTTTATGTATCTATGTT+TGG - chr2.2:2982016-2982035 MS.gene051935:intron 20.0%
!!! ATATTTATACATTTTCTGAG+AGG - chr2.2:2980896-2980915 MS.gene051935:intron 20.0%
!!! ATATTTTCTTTATTTGTTCG+CGG + chr2.2:2979299-2979318 None:intergenic 20.0%
!!! GTTTTATTTTTGTTTTGTGA+TGG + chr2.2:2979439-2979458 None:intergenic 20.0%
!!! TAATTAGTTTATGGTAATCT+TGG - chr2.2:2976933-2976952 MS.gene051935:intron 20.0%
!!! TACAATACAAAGAAGTATTA+AGG + chr2.2:2981994-2982013 None:intergenic 20.0%
!!! TACTTAATTTCTTATTTCAC+TGG - chr2.2:2982198-2982217 MS.gene051935:intron 20.0%
!!! TTAGATAAAGAGTGTTAATA+CGG + chr2.2:2978069-2978088 None:intergenic 20.0%
! AAAAACTGCCAAAAAACAAA+TGG + chr2.2:2977816-2977835 None:intergenic 25.0%
! AAAACTGCCAAAAAACAAAT+GGG + chr2.2:2977815-2977834 None:intergenic 25.0%
! AAATAATTGAATGAGCATGA+AGG - chr2.2:2978774-2978793 MS.gene051935:intron 25.0%
! AAGTCACCATTAAATAGATA+TGG + chr2.2:2981122-2981141 None:intergenic 25.0%
! AATAATGCATTAGGAAATAG+TGG - chr2.2:2979225-2979244 MS.gene051935:intron 25.0%
! AATTTCTTTGACCATTTATG+TGG - chr2.2:2980364-2980383 MS.gene051935:intron 25.0%
! AGAATGTATAATATATGCAG+GGG + chr2.2:2980743-2980762 None:intergenic 25.0%
! AGTCGTTGCATTAATAATAT+TGG - chr2.2:2977996-2978015 MS.gene051935:CDS 25.0%
! ATAATGTTAGGTTTCAAATC+AGG + chr2.2:2982558-2982577 None:intergenic 25.0%
! ATATAATGAAACCTAAGAAG+AGG + chr2.2:2981470-2981489 None:intergenic 25.0%
! ATATCTTCATTCAATTTGTG+AGG - chr2.2:2982975-2982994 MS.gene051935:CDS 25.0%
! CAAATTTGTCAAAATGTTTG+CGG - chr2.2:2981785-2981804 MS.gene051935:intron 25.0%
! GAAAATGATGAATGATTTCA+AGG - chr2.2:2979771-2979790 MS.gene051935:CDS 25.0%
! GAAGAATGTATAATATATGC+AGG + chr2.2:2980745-2980764 None:intergenic 25.0%
! GCTTCAAATGTAATAATGTT+AGG + chr2.2:2982570-2982589 None:intergenic 25.0%
! TAAAATTTGTCAGGAATAGA+AGG + chr2.2:2980805-2980824 None:intergenic 25.0%
! TGAACACCGTTAAAATAATA+AGG + chr2.2:2978173-2978192 None:intergenic 25.0%
! TTCTTTGTTACGTAGATATT+TGG - chr2.2:2980107-2980126 MS.gene051935:intron 25.0%
! TTGTATTTACAGTTGGAAAT+TGG - chr2.2:2977022-2977041 MS.gene051935:intron 25.0%
! TTTATTTACACTTTGATCAC+AGG - chr2.2:2980214-2980233 MS.gene051935:intron 25.0%
! TTTCGCAAATAATAAACCAA+GGG + chr2.2:2980059-2980078 None:intergenic 25.0%
! TTTGATGTTGTATTTACAGT+TGG - chr2.2:2977015-2977034 MS.gene051935:intron 25.0%
!! AAACACTCTTATTAGGTTTT+TGG - chr2.2:2978036-2978055 MS.gene051935:CDS 25.0%
!! AGAATCAGTGTTGTTAAATA+TGG - chr2.2:2982704-2982723 MS.gene051935:intron 25.0%
!! CACATGACATGAAAATATTT+TGG - chr2.2:2979664-2979683 MS.gene051935:intron 25.0%
!! GAACTCATACATTTTAAATG+CGG - chr2.2:2980681-2980700 MS.gene051935:intron 25.0%
!! GAATCAGTGTTGTTAAATAT+GGG - chr2.2:2982705-2982724 MS.gene051935:intron 25.0%
!! GATTTTGTTGCAAACAAAAA+AGG - chr2.2:2979927-2979946 MS.gene051935:intron 25.0%
!! GCATAAAATAATGGAAAATC+AGG + chr2.2:2982497-2982516 None:intergenic 25.0%
!! TAGAGAAATTTTATGCATGT+TGG - chr2.2:2979020-2979039 MS.gene051935:intron 25.0%
!! TTTTAATGTATATGCCCAAT+AGG - chr2.2:2978921-2978940 MS.gene051935:intron 25.0%
!! TTTTCGCAAATAATAAACCA+AGG + chr2.2:2980060-2980079 None:intergenic 25.0%
!! TTTTTCTTCTTCTTTCATTG+AGG - chr2.2:2978439-2978458 MS.gene051935:intron 25.0%
!!! AACAAGATATTTGGTTTTGA+GGG - chr2.2:2981738-2981757 MS.gene051935:intron 25.0%
!!! ATTTGTTTCTGTTTTCATCT+TGG - chr2.2:2976889-2976908 MS.gene051935:intron 25.0%
!!! CTAAAGGTAGATCATTTTTT+TGG - chr2.2:2980639-2980658 MS.gene051935:intron 25.0%
!!! CTGTTTTTTTTAGTTATGTG+GGG - chr2.2:2977899-2977918 MS.gene051935:CDS 25.0%
!!! GCTGTTTTTTTTAGTTATGT+GGG - chr2.2:2977898-2977917 MS.gene051935:CDS 25.0%
!!! TAGATAAAGAGTGTTAATAC+GGG + chr2.2:2978068-2978087 None:intergenic 25.0%
!!! TCAATAATGCTTATTTTGTG+TGG - chr2.2:2981585-2981604 MS.gene051935:intron 25.0%
!!! TCCTAATTTGTTGATTCATT+GGG - chr2.2:2977389-2977408 MS.gene051935:intron 25.0%
!!! TGAATATTTTTGAGCTCAAT+GGG - chr2.2:2981078-2981097 MS.gene051935:CDS 25.0%
!!! TGAGCTCCTTATTATTTTAA+CGG - chr2.2:2978164-2978183 MS.gene051935:intron 25.0%
!!! TGCTGTTTTTTTTAGTTATG+TGG - chr2.2:2977897-2977916 MS.gene051935:CDS 25.0%
!!! TGTTTTTTTTAGTTATGTGG+GGG - chr2.2:2977900-2977919 MS.gene051935:CDS 25.0%
!!! TTCCATTATTTTATGCAGAA+GGG - chr2.2:2982501-2982520 MS.gene051935:intron 25.0%
!!! TTGAATATTTTTGAGCTCAA+TGG - chr2.2:2981077-2981096 MS.gene051935:CDS 25.0%
!!! TTGACGATTAAGGTATTTTA+TGG + chr2.2:2978962-2978981 None:intergenic 25.0%
!!! TTTAATTGACTTGGTGTATT+TGG + chr2.2:2978698-2978717 None:intergenic 25.0%
!!! TTTCCATTATTTTATGCAGA+AGG - chr2.2:2982500-2982519 MS.gene051935:intron 25.0%
!!! TTTTGTTTGCAACAAAATCT+TGG + chr2.2:2979926-2979945 None:intergenic 25.0%
!!! TTTTTTGGCAGTTTTTTTCT+AGG - chr2.2:2977820-2977839 MS.gene051935:CDS 25.0%
AAAAAATGGGTCAGATCTAA+AGG - chr2.2:2980623-2980642 MS.gene051935:intron 30.0%
AAAGTAAACGTTTGCGAAAT+CGG - chr2.2:2978397-2978416 MS.gene051935:intron 30.0%
AAATACAACATCAAACAGGT+CGG + chr2.2:2977010-2977029 None:intergenic 30.0%
AAATGTATTTGCATTTGTCC+TGG - chr2.2:2979879-2979898 MS.gene051935:intron 30.0%
AAGAGACTAGACATTGTTTA+TGG - chr2.2:2978359-2978378 MS.gene051935:intron 30.0%
AAGGAATAAGAAAGCTCTTA+AGG - chr2.2:2977431-2977450 MS.gene051935:CDS 30.0%
AATTATCACTCTTGCAATTG+TGG - chr2.2:2979071-2979090 MS.gene051935:intron 30.0%
AATTGTTGCTAGTAACTTCA+AGG - chr2.2:2980081-2980100 MS.gene051935:intron 30.0%
ACATTAATATCATAAGCGTG+TGG + chr2.2:2982435-2982454 None:intergenic 30.0%
ACCTAAAACCAATTAATCCT+AGG - chr2.2:2979146-2979165 MS.gene051935:intron 30.0%
AGAAGGAGATACTATTACTT+TGG - chr2.2:2979738-2979757 MS.gene051935:CDS 30.0%
AGAGACTAGACATTGTTTAT+GGG - chr2.2:2978360-2978379 MS.gene051935:intron 30.0%
AGGAAAAAACTTGACGATTA+AGG + chr2.2:2978972-2978991 None:intergenic 30.0%
AGGAATAAGAAAGCTCTTAA+GGG - chr2.2:2977432-2977451 MS.gene051935:CDS 30.0%
ATACAAGAAAAACGATAGAG+CGG + chr2.2:2977949-2977968 None:intergenic 30.0%
ATACGCAACAATCTTCTAAA+TGG + chr2.2:2979629-2979648 None:intergenic 30.0%
ATCAGGATATGTATACTTCA+TGG + chr2.2:2982480-2982499 None:intergenic 30.0%
ATCTATGTTTGGTATGTGTA+GGG - chr2.2:2982027-2982046 MS.gene051935:intron 30.0%
ATCTCATAAATCAAAGCACA+AGG - chr2.2:2982262-2982281 MS.gene051935:intron 30.0%
ATTTCCTCTAGCTATATACA+TGG + chr2.2:2981700-2981719 None:intergenic 30.0%
CAATGAATCAACAAATTAGG+AGG + chr2.2:2977390-2977409 None:intergenic 30.0%
CACAAAACCGATTAATTGAT+CGG + chr2.2:2981911-2981930 None:intergenic 30.0%
CACAAGAAAAAATCCAAACA+AGG + chr2.2:2979565-2979584 None:intergenic 30.0%
CTCAAATCCGATCAATTAAT+CGG - chr2.2:2981901-2981920 MS.gene051935:intron 30.0%
CTGTAAATACAACATCAAAC+AGG + chr2.2:2977014-2977033 None:intergenic 30.0%
GAAGTCCCGTATTAATTATT+TGG - chr2.2:2981294-2981313 MS.gene051935:intron 30.0%
GCTAGAGAAATTTACCTTAA+AGG + chr2.2:2980579-2980598 None:intergenic 30.0%
GTTGCATTAATAATATTGGC+TGG - chr2.2:2978000-2978019 MS.gene051935:CDS 30.0%
TAACTAAGTGAAGTGAAAAG+AGG + chr2.2:2981635-2981654 None:intergenic 30.0%
TACCCTTCTGCATAAAATAA+TGG + chr2.2:2982506-2982525 None:intergenic 30.0%
TACCTTAAAGGTGAATATGT+GGG + chr2.2:2980567-2980586 None:intergenic 30.0%
TACGCAACAATCTTCTAAAT+GGG + chr2.2:2979628-2979647 None:intergenic 30.0%
TATCTATGTTTGGTATGTGT+AGG - chr2.2:2982026-2982045 MS.gene051935:intron 30.0%
TATGGCAAAAGGTAATGAAT+TGG - chr2.2:2977343-2977362 MS.gene051935:intron 30.0%
TATTCAGGATCAAGAATAGA+AGG - chr2.2:2979721-2979740 MS.gene051935:CDS 30.0%
TATTGCCAATTTGTGAATGA+TGG - chr2.2:2982786-2982805 MS.gene051935:intron 30.0%
TCAATCATCCTAGGATTAAT+TGG + chr2.2:2979157-2979176 None:intergenic 30.0%
TCAGGATATGTATACTTCAT+GGG + chr2.2:2982479-2982498 None:intergenic 30.0%
TCCCAATGAATCAACAAATT+AGG + chr2.2:2977393-2977412 None:intergenic 30.0%
TCTCATAAATCAAAGCACAA+GGG - chr2.2:2982263-2982282 MS.gene051935:intron 30.0%
TGAAAACTGTTACGAAATTG+AGG + chr2.2:2978571-2978590 None:intergenic 30.0%
TGGTAAAAAGAAAACCTAAC+AGG + chr2.2:2981242-2981261 None:intergenic 30.0%
TGTTACAAAAAGGTTCTTGA+AGG - chr2.2:2982142-2982161 MS.gene051935:intron 30.0%
TTAAGGGATTATGGCTTATT+TGG - chr2.2:2977448-2977467 MS.gene051935:CDS 30.0%
TTACCTTAAAGGTGAATATG+TGG + chr2.2:2980568-2980587 None:intergenic 30.0%
TTGAGCAACATATAAATGAG+AGG - chr2.2:2981328-2981347 MS.gene051935:intron 30.0%
TTGTTTATCACATGAGCTAA+AGG + chr2.2:2981828-2981847 None:intergenic 30.0%
TTTATGGGGCTATCTAATAT+GGG - chr2.2:2980458-2980477 MS.gene051935:intron 30.0%
TTTGTTACGTAGATATTTGG+AGG - chr2.2:2980110-2980129 MS.gene051935:intron 30.0%
! AAGAGCATGAACAAGATATT+TGG - chr2.2:2981729-2981748 MS.gene051935:intron 30.0%
! AGATATGGATTTTCTTCTGA+AGG + chr2.2:2981107-2981126 None:intergenic 30.0%
! CATTATTACATTTGAAGCAG+TGG - chr2.2:2982572-2982591 MS.gene051935:intron 30.0%
! TTTTATGGGGCTATCTAATA+TGG - chr2.2:2980457-2980476 MS.gene051935:intron 30.0%
! TTTTCAATTACTGCCTTGAT+TGG - chr2.2:2979586-2979605 MS.gene051935:intron 30.0%
!! AGATAAAGAGTGTTAATACG+GGG + chr2.2:2978067-2978086 None:intergenic 30.0%
!! CTCCTAATTTGTTGATTCAT+TGG - chr2.2:2977388-2977407 MS.gene051935:intron 30.0%
!! TAGTTTTTAGATGCCAATCA+AGG + chr2.2:2979602-2979621 None:intergenic 30.0%
!! TCACTTGTGTAATTGCTTTT+GGG - chr2.2:2981399-2981418 MS.gene051935:intron 30.0%
!! TTTTACGCCCATTTGTTTTT+TGG - chr2.2:2977805-2977824 MS.gene051935:intron 30.0%
!!! ATTGGGGAGCTATTTTTTTA+GGG - chr2.2:2980391-2980410 MS.gene051935:intron 30.0%
!!! GAACAAGATATTTGGTTTTG+AGG - chr2.2:2981737-2981756 MS.gene051935:intron 30.0%
!!! GATTTTTGAAACAAGTCAAG+TGG - chr2.2:2979192-2979211 MS.gene051935:intron 30.0%
!!! GTTTTTTTTAGTTATGTGGG+GGG - chr2.2:2977901-2977920 MS.gene051935:CDS 30.0%
!!! TAATGCTTATTTTGTGTGGT+TGG - chr2.2:2981589-2981608 MS.gene051935:intron 30.0%
!!! TCCTAGGATTAATTGGTTTT+AGG + chr2.2:2979150-2979169 None:intergenic 30.0%
!!! TTGCTTTTTGTCTTTGCTTT+TGG + chr2.2:2979464-2979483 None:intergenic 30.0%
!!! TTTTTGTTTTGTGATGGTCT+TGG + chr2.2:2979433-2979452 None:intergenic 30.0%
!!! TTTTTTTTAGTTATGTGGGG+GGG - chr2.2:2977902-2977921 MS.gene051935:CDS 30.0%
AAACCTAAGAAGAGGTTGTT+TGG + chr2.2:2981462-2981481 None:intergenic 35.0%
AACCTTTGATTGTGATGCAA+CGG + chr2.2:2976734-2976753 None:intergenic 35.0%
AAGTTGTTTGCATAAGCCAT+TGG + chr2.2:2983077-2983096 None:intergenic 35.0%
AATGGTGACTTTGTAGATAG+AGG - chr2.2:2981131-2981150 MS.gene051935:CDS 35.0%
ACAGTTATGTCAACAAGAGA+AGG + chr2.2:2979967-2979986 None:intergenic 35.0%
ACCTTAAAGGTGAATATGTG+GGG + chr2.2:2980566-2980585 None:intergenic 35.0%
ACGCAACAATCTTCTAAATG+GGG + chr2.2:2979627-2979646 None:intergenic 35.0%
ACGTAGATATTTGGAGGATA+GGG - chr2.2:2980116-2980135 MS.gene051935:intron 35.0%
ACTAGACATTGTTTATGGGA+AGG - chr2.2:2978364-2978383 MS.gene051935:intron 35.0%
ACTCTCAAGTACTTATGGAA+AGG + chr2.2:2979001-2979020 None:intergenic 35.0%
AGAAAGCTCTTAAGGGATTA+TGG - chr2.2:2977439-2977458 MS.gene051935:CDS 35.0%
AGAAAGGGAAGAAACATACA+AGG - chr2.2:2979381-2979400 MS.gene051935:intron 35.0%
AGCAAAGACAAAAAGCAACA+TGG - chr2.2:2979466-2979485 MS.gene051935:intron 35.0%
AGGTGCTTCAAATCGAATAA+AGG + chr2.2:2982538-2982557 None:intergenic 35.0%
ATATCCACCATAAAACGCTT+TGG + chr2.2:2982817-2982836 None:intergenic 35.0%
ATTCTTGATCCTGAATATCG+TGG + chr2.2:2979718-2979737 None:intergenic 35.0%
ATTGCACGAGTTAAACAACA+AGG + chr2.2:2976776-2976795 None:intergenic 35.0%
CACATAGTGATGGTTGTAAT+AGG - chr2.2:2978819-2978838 MS.gene051935:intron 35.0%
CATACCTAAAACAATGAACC+AGG + chr2.2:2979900-2979919 None:intergenic 35.0%
CATACCTATAACAAAACCGA+TGG + chr2.2:2977669-2977688 None:intergenic 35.0%
CATTCGTAGAACATACAAGT+AGG + chr2.2:2977606-2977625 None:intergenic 35.0%
CTACTTGTATGTTCTACGAA+TGG - chr2.2:2977604-2977623 MS.gene051935:CDS 35.0%
GAAGGAACGTTGTTAATTGT+GGG - chr2.2:2978792-2978811 MS.gene051935:intron 35.0%
GAATTAGGATCAATCATCCT+AGG + chr2.2:2979166-2979185 None:intergenic 35.0%
GACATACTTTCTTCTTGGAT+TGG - chr2.2:2983012-2983031 MS.gene051935:CDS 35.0%
GCAAAAGGTAATGAATTGGA+TGG - chr2.2:2977347-2977366 MS.gene051935:intron 35.0%
GGAAAACATGTTACTGTTTG+TGG - chr2.2:2979994-2980013 MS.gene051935:CDS 35.0%
GGCTAATGCATAATTTATGC+AGG - chr2.2:2980518-2980537 MS.gene051935:intron 35.0%
GGGAGTAATATTTATATGCG+TGG - chr2.2:2978543-2978562 MS.gene051935:CDS 35.0%
GGTTATGAGATTCAACATGA+CGG - chr2.2:2982284-2982303 MS.gene051935:intron 35.0%
GTTACCTGATCACAGTAATT+TGG + chr2.2:2982335-2982354 None:intergenic 35.0%
TAAGAGATACATACAAGTGC+TGG + chr2.2:2979522-2979541 None:intergenic 35.0%
TAAGCATCTAATCAGGTGAT+AGG + chr2.2:2981531-2981550 None:intergenic 35.0%
TAAGCTTATACCATGCCTAA+TGG + chr2.2:2979117-2979136 None:intergenic 35.0%
TACGTAGATATTTGGAGGAT+AGG - chr2.2:2980115-2980134 MS.gene051935:intron 35.0%
TACTTATGGAAAGGTTTGTG+AGG + chr2.2:2978992-2979011 None:intergenic 35.0%
TATTTGGCATACTACTGTGT+GGG - chr2.2:2977464-2977483 MS.gene051935:CDS 35.0%
TCAATTTGTGAGGTTATGTC+TGG - chr2.2:2982985-2983004 MS.gene051935:CDS 35.0%
TCTCTACTCTCAAGTACTTA+TGG + chr2.2:2979006-2979025 None:intergenic 35.0%
TCTTTGACCATTTATGTGGA+GGG - chr2.2:2980368-2980387 MS.gene051935:intron 35.0%
TGAAGGAACGTTGTTAATTG+TGG - chr2.2:2978791-2978810 MS.gene051935:intron 35.0%
TTATGTGTCTTACCTTCATC+AGG + chr2.2:2981939-2981958 None:intergenic 35.0%
TTATTTGGCATACTACTGTG+TGG - chr2.2:2977463-2977482 MS.gene051935:CDS 35.0%
TTCACTTCACTTAGTTAGCT+GGG - chr2.2:2981638-2981657 MS.gene051935:intron 35.0%
TTCAGTGTTATCAATTGCAG+TGG + chr2.2:2982883-2982902 None:intergenic 35.0%
TTCTTTGACCATTTATGTGG+AGG - chr2.2:2980367-2980386 MS.gene051935:intron 35.0%
TTGATTCATTGGGATTGTTG+GGG - chr2.2:2977399-2977418 MS.gene051935:intron 35.0%
TTGGTGAGGATGTTACAAAA+AGG - chr2.2:2982132-2982151 MS.gene051935:intron 35.0%
TTGTGGAATTGAGGAAATTG+TGG - chr2.2:2977530-2977549 MS.gene051935:intron 35.0%
TTTATGCAGAAGGGTAACAA+AGG - chr2.2:2982510-2982529 MS.gene051935:intron 35.0%
TTTCACTTCACTTAGTTAGC+TGG - chr2.2:2981637-2981656 MS.gene051935:intron 35.0%
! AAGAAAATTTTCGTCGTCCA+TGG - chr2.2:2981846-2981865 MS.gene051935:intron 35.0%
! AATAATTTTACGGCATGTGC+AGG - chr2.2:2982386-2982405 MS.gene051935:intron 35.0%
! ACACTCTTTATCTAAAGCCT+TGG - chr2.2:2978074-2978093 MS.gene051935:intron 35.0%
! ACAGTAACATGTTTTCCATG+AGG + chr2.2:2979991-2980010 None:intergenic 35.0%
! AGATAGAGGATCATTTTCAG+TGG - chr2.2:2981145-2981164 MS.gene051935:CDS 35.0%
! CTACCTAAACCTTGTTTCAA+AGG - chr2.2:2976811-2976830 MS.gene051935:intron 35.0%
! CTCACTTGTGTAATTGCTTT+TGG - chr2.2:2981398-2981417 MS.gene051935:intron 35.0%
! GATGCGAAATATGATGATGA+TGG - chr2.2:2978638-2978657 MS.gene051935:CDS 35.0%
! GTGTTGACATACTTTCTTCT+TGG - chr2.2:2983007-2983026 MS.gene051935:CDS 35.0%
! GTTGATTCATTGGGATTGTT+GGG - chr2.2:2977398-2977417 MS.gene051935:intron 35.0%
! TCTTTCGTTATTAGCCTGTT+AGG - chr2.2:2981225-2981244 MS.gene051935:intron 35.0%
! TTGTCCTGGTTCATTGTTTT+AGG - chr2.2:2979893-2979912 MS.gene051935:intron 35.0%
!! AACATGAGAGTACTTCCTAT+TGG + chr2.2:2978939-2978958 None:intergenic 35.0%
!! ACATGAGAGTACTTCCTATT+GGG + chr2.2:2978938-2978957 None:intergenic 35.0%
!! ATTTGCTCACCTTTGAAACA+AGG + chr2.2:2976823-2976842 None:intergenic 35.0%
!! ATTTTCAAGGATGACGTTTG+TGG - chr2.2:2977513-2977532 MS.gene051935:intron 35.0%
!! TACAAGTACAAGAAGTATCG+AGG - chr2.2:2979406-2979425 MS.gene051935:intron 35.0%
!! TCACCTTTGAAACAAGGTTT+AGG + chr2.2:2976817-2976836 None:intergenic 35.0%
!! TCTGCTGTGTTTGTTTTTCT+GGG - chr2.2:2977739-2977758 MS.gene051935:intron 35.0%
!! TGTAAAGCCCACTTAGTTTT+TGG - chr2.2:2977859-2977878 MS.gene051935:CDS 35.0%
!! TGTTGATTCATTGGGATTGT+TGG - chr2.2:2977397-2977416 MS.gene051935:intron 35.0%
!! TTCTGCTGTGTTTGTTTTTC+TGG - chr2.2:2977738-2977757 MS.gene051935:intron 35.0%
!! TTTTGTTATAGGTATGGAGG+TGG - chr2.2:2977673-2977692 MS.gene051935:CDS 35.0%
!! TTTTTAGTCAAGTAGCCTAG+CGG + chr2.2:2980601-2980620 None:intergenic 35.0%
!!! AAAGCGTTTTATGGTGGATA+TGG - chr2.2:2982816-2982835 MS.gene051935:intron 35.0%
!!! CATCGGTTTTGTTATAGGTA+TGG - chr2.2:2977667-2977686 MS.gene051935:CDS 35.0%
!!! GATTGGGGAGCTATTTTTTT+AGG - chr2.2:2980390-2980409 MS.gene051935:intron 35.0%
!!! TTGGGGAGCTATTTTTTTAG+GGG - chr2.2:2980392-2980411 MS.gene051935:intron 35.0%
!!! TTTTTTTCTAGGTGTGTGCT+GGG - chr2.2:2977831-2977850 MS.gene051935:CDS 35.0%
AAGATCATAGAACTGCATGC+AGG + chr2.2:2981057-2981076 None:intergenic 40.0%
AATATCATAAGCGTGTGGCA+CGG + chr2.2:2982430-2982449 None:intergenic 40.0%
AATGTCGAATTCTTGGCTTC+TGG - chr2.2:2982847-2982866 MS.gene051935:intron 40.0%
ACCATTTATGTGGAGGGATT+GGG - chr2.2:2980374-2980393 MS.gene051935:intron 40.0%
ACCCCACATATTCACCTTTA+AGG - chr2.2:2980562-2980581 MS.gene051935:intron 40.0%
AGGCTAATAACGAAAGAGCT+AGG + chr2.2:2981222-2981241 None:intergenic 40.0%
AGGTTGTAACAGAAGAGACA+TGG + chr2.2:2982357-2982376 None:intergenic 40.0%
ATCACTCTTGCAATTGTGGT+TGG - chr2.2:2979075-2979094 MS.gene051935:intron 40.0%
ATGTATGAGTTCCAGCAACT+AGG + chr2.2:2980673-2980692 None:intergenic 40.0%
CACCACCATCATTCACAAAT+TGG + chr2.2:2982794-2982813 None:intergenic 40.0%
CACTTGCACAACACATTCTT+TGG + chr2.2:2981262-2981281 None:intergenic 40.0%
GAAACCAACGAGAGAGAAAA+AGG + chr2.2:2978500-2978519 None:intergenic 40.0%
GCTATTGAAACACCATATGG+CGG - chr2.2:2982727-2982746 MS.gene051935:intron 40.0%
GGCTAATAACGAAAGAGCTA+GGG + chr2.2:2981221-2981240 None:intergenic 40.0%
GGCTTAGAATGTCGAATTCT+TGG - chr2.2:2982840-2982859 MS.gene051935:intron 40.0%
GGTGAGCAAATCTCAATCAA+AGG - chr2.2:2976832-2976851 MS.gene051935:intron 40.0%
GTATATGACAATTGCTCCCT+TGG - chr2.2:2980040-2980059 MS.gene051935:intron 40.0%
GTATGTTCTACGAATGGTGT+TGG - chr2.2:2977610-2977629 MS.gene051935:CDS 40.0%
GTGATGGTTGTAATAGGATC+TGG - chr2.2:2978825-2978844 MS.gene051935:intron 40.0%
GTTGACATAACTGTTCCTCA+TGG - chr2.2:2979973-2979992 MS.gene051935:CDS 40.0%
TCAGCCATGTATATAGCTAG+AGG - chr2.2:2981693-2981712 MS.gene051935:intron 40.0%
TGACCAAACAACCTCTTCTT+AGG - chr2.2:2981456-2981475 MS.gene051935:intron 40.0%
TGACCCCATCAACACTAAAA+AGG + chr2.2:2981875-2981894 None:intergenic 40.0%
TGCCAATTTGTGAATGATGG+TGG - chr2.2:2982789-2982808 MS.gene051935:intron 40.0%
TGCTCCAAATTACTGTGATC+AGG - chr2.2:2982328-2982347 MS.gene051935:intron 40.0%
TGGGCTATTGAAACACCATA+TGG - chr2.2:2982724-2982743 MS.gene051935:intron 40.0%
TGTATAATATATGCAGGGGC+CGG + chr2.2:2980739-2980758 None:intergenic 40.0%
TGTTGCTAGTAACTTCAAGG+TGG - chr2.2:2980084-2980103 MS.gene051935:intron 40.0%
TTAAATCCTCCGTACACATG+AGG + chr2.2:2980940-2980959 None:intergenic 40.0%
TTGAAACAAACGCACCCTTA+AGG - chr2.2:2977255-2977274 MS.gene051935:intron 40.0%
TTGCTAGTTGTTGCTCCATT+AGG - chr2.2:2979099-2979118 MS.gene051935:intron 40.0%
TTTAAGTGCATGTCTCCATC+TGG - chr2.2:2981191-2981210 MS.gene051935:intron 40.0%
! AAAATTTTCGTCGTCCATGG+AGG - chr2.2:2981849-2981868 MS.gene051935:intron 40.0%
! ACATCTTTTCCTTCATTGCG+AGG - chr2.2:2977308-2977327 MS.gene051935:intron 40.0%
! AGAAGATCAAAGTGCTCTCA+TGG - chr2.2:2977553-2977572 MS.gene051935:intron 40.0%
! CACTAGCTTGATATGGCAAA+AGG - chr2.2:2977332-2977351 MS.gene051935:intron 40.0%
! CTCTTTATCTAAAGCCTTGG+AGG - chr2.2:2978077-2978096 MS.gene051935:intron 40.0%
! TAAGGGTGCGTTTGTTTCAA+GGG + chr2.2:2977255-2977274 None:intergenic 40.0%
! TTAAGGGTGCGTTTGTTTCA+AGG + chr2.2:2977256-2977275 None:intergenic 40.0%
!! AACAGAAGTGCTTGGATAGA+GGG - chr2.2:2979794-2979813 MS.gene051935:CDS 40.0%
!! AAGCCATTGGCTTAACATCA+GGG + chr2.2:2983064-2983083 None:intergenic 40.0%
!! ATACATACAAGTGCTGGAGT+TGG + chr2.2:2979516-2979535 None:intergenic 40.0%
!! GTAATTGCTTTTGGGCAATG+CGG - chr2.2:2981407-2981426 MS.gene051935:intron 40.0%
!! TAAGCCATTGGCTTAACATC+AGG + chr2.2:2983065-2983084 None:intergenic 40.0%
!! TACATACAAGTGCTGGAGTT+GGG + chr2.2:2979515-2979534 None:intergenic 40.0%
!! TTTCAAGGAACAGAAGTGCT+TGG - chr2.2:2979786-2979805 MS.gene051935:CDS 40.0%
!!! AGGCCTTTTTAGTGTTGATG+GGG - chr2.2:2981869-2981888 MS.gene051935:intron 40.0%
!!! CGGTTTTGTTATAGGTATGG+AGG - chr2.2:2977670-2977689 MS.gene051935:CDS 40.0%
!!! GAGGCCTTTTTAGTGTTGAT+GGG - chr2.2:2981868-2981887 MS.gene051935:intron 40.0%
!!! GATATTTGGTTTTGAGGGTG+AGG - chr2.2:2981743-2981762 MS.gene051935:intron 40.0%
!!! GGAGCTATTTTTTTAGGGGA+GGG - chr2.2:2980396-2980415 MS.gene051935:intron 40.0%
!!! GTTTTTTTCTAGGTGTGTGC+TGG - chr2.2:2977830-2977849 MS.gene051935:CDS 40.0%
AAGAGCTAGGGTTTACCAGA+TGG + chr2.2:2981209-2981228 None:intergenic 45.0%
AAGAGGTTGTTTGGTCACGA+GGG + chr2.2:2981453-2981472 None:intergenic 45.0%
AAGGTGAATATGTGGGGTGT+CGG + chr2.2:2980560-2980579 None:intergenic 45.0%
ACAAACGCACCCTTAAGGAT+TGG - chr2.2:2977260-2977279 MS.gene051935:intron 45.0%
ACACCCTGATGTTAAGCCAA+TGG - chr2.2:2983058-2983077 MS.gene051935:CDS 45.0%
ACCAGCTGCCAAAAACTAAG+TGG + chr2.2:2977870-2977889 None:intergenic 45.0%
AGTTGTTGCTCCATTAGGCA+TGG - chr2.2:2979104-2979123 MS.gene051935:intron 45.0%
ATACTACTGTGTGGGTGGTA+TGG - chr2.2:2977472-2977491 MS.gene051935:CDS 45.0%
ATAGAGCGGACGACTTACAA+AGG + chr2.2:2977935-2977954 None:intergenic 45.0%
CAAACAGGTCGGAAATTCGA+AGG + chr2.2:2976999-2977018 None:intergenic 45.0%
CAACACTAAAAAGGCCTCCA+TGG + chr2.2:2981866-2981885 None:intergenic 45.0%
CAAGGCTTGAGCAAACATCT+TGG + chr2.2:2976758-2976777 None:intergenic 45.0%
CACATTGGGCTCGTTTGTTT+GGG - chr2.2:2978107-2978126 MS.gene051935:intron 45.0%
CACCGTTGCATCACAATCAA+AGG - chr2.2:2976729-2976748 MS.gene051935:intron 45.0%
CATAATTTATGCAGGAGCCG+AGG - chr2.2:2980526-2980545 MS.gene051935:intron 45.0%
CCAGCTGCCAAAAACTAAGT+GGG + chr2.2:2977869-2977888 None:intergenic 45.0%
CCATTTATGTGGAGGGATTG+GGG - chr2.2:2980375-2980394 MS.gene051935:intron 45.0%
CTTTGATTGTGATGCAACGG+TGG + chr2.2:2976731-2976750 None:intergenic 45.0%
GACCATTTATGTGGAGGGAT+TGG - chr2.2:2980373-2980392 MS.gene051935:intron 45.0%
GAGCTTAGCTCACTTGGTAA+GGG - chr2.2:2980497-2980516 MS.gene051935:intron 45.0%
GATGGTCGCATAAATCGAAC+AGG - chr2.2:2978656-2978675 MS.gene051935:CDS 45.0%
GATGTGCATGGTCAGGTAAT+TGG - chr2.2:2980018-2980037 MS.gene051935:CDS 45.0%
GCTCATTCACGCTGGATTAA+AGG - chr2.2:2978873-2978892 MS.gene051935:intron 45.0%
GGATGACGTTTGTGGAATTG+AGG - chr2.2:2977521-2977540 MS.gene051935:intron 45.0%
GGTAAATTTCTCTAGCCGCT+AGG - chr2.2:2980583-2980602 MS.gene051935:intron 45.0%
GTATAATATATGCAGGGGCC+GGG + chr2.2:2980738-2980757 None:intergenic 45.0%
TAACGGCGAAGGCAATCATT+CGG + chr2.2:2977639-2977658 None:intergenic 45.0%
TCATTGGGATTGTTGGGGTA+TGG - chr2.2:2977404-2977423 MS.gene051935:CDS 45.0%
TCCTCTCGACCAATCCTTAA+GGG + chr2.2:2977272-2977291 None:intergenic 45.0%
TGAGCTTAGCTCACTTGGTA+AGG - chr2.2:2980496-2980515 MS.gene051935:intron 45.0%
TGGTCAAGTATCCTAGTTGC+TGG - chr2.2:2980659-2980678 MS.gene051935:intron 45.0%
TGTGTCTTACCTTCATCAGG+AGG + chr2.2:2981936-2981955 None:intergenic 45.0%
TTCCTCTCGACCAATCCTTA+AGG + chr2.2:2977273-2977292 None:intergenic 45.0%
! AGTGTCTGGAATTCGAACTC+CGG - chr2.2:2980712-2980731 MS.gene051935:intron 45.0%
! ATTGGCTTAACATCAGGGTG+TGG + chr2.2:2983059-2983078 None:intergenic 45.0%
! GTGAGTCTAGCTCAGTTGAA+AGG + chr2.2:2980767-2980786 None:intergenic 45.0%
! TATCTAAAGCCTTGGAGGCT+TGG - chr2.2:2978082-2978101 MS.gene051935:intron 45.0%
! TCAAAGTGCTCTCATGGAGA+TGG - chr2.2:2977559-2977578 MS.gene051935:intron 45.0%
! TGCTCCTTTTTCTCTCTCGT+TGG - chr2.2:2978493-2978512 MS.gene051935:intron 45.0%
! TTTTGTGAGCCTCCTGATGA+AGG - chr2.2:2981924-2981943 MS.gene051935:intron 45.0%
!! AAACACCATATGGCGGATTG+TGG - chr2.2:2982734-2982753 MS.gene051935:intron 45.0%
!! AGGATCTGGAGTGTTGTCAT+TGG - chr2.2:2978839-2978858 MS.gene051935:intron 45.0%
!! CTGTGTTTGTTTTTCTGGGC+GGG - chr2.2:2977743-2977762 MS.gene051935:intron 45.0%
!! GAACAGAAGTGCTTGGATAG+AGG - chr2.2:2979793-2979812 MS.gene051935:CDS 45.0%
!! GCTGTGTTTGTTTTTCTGGG+CGG - chr2.2:2977742-2977761 MS.gene051935:intron 45.0%
!! GGAGGCCTTTTTAGTGTTGA+TGG - chr2.2:2981867-2981886 MS.gene051935:intron 45.0%
!! GGTTGATGCATGACTTGCTA+TGG - chr2.2:2982048-2982067 MS.gene051935:intron 45.0%
!! TGGAGTGTTGTCATTGGCAT+TGG - chr2.2:2978845-2978864 MS.gene051935:intron 45.0%
!! TTAAGGATTGGTCGAGAGGA+AGG - chr2.2:2977272-2977291 MS.gene051935:intron 45.0%
!!! AGGGCCATCGGTTTTGTTAT+AGG - chr2.2:2977662-2977681 MS.gene051935:CDS 45.0%
!!! GCGTTTTATGGTGGATATGG+TGG - chr2.2:2982819-2982838 MS.gene051935:intron 45.0%
!!! GGGAGCTATTTTTTTAGGGG+AGG - chr2.2:2980395-2980414 MS.gene051935:intron 45.0%
!!! TGGGTGCTTTTGTTTTGGTG+AGG - chr2.2:2982118-2982137 MS.gene051935:intron 45.0%
!! ATTATAATAAAAAATGAAAA+AGG - chr2.2:2982678-2982697 MS.gene051935:intron 5.0%
!! TAAAATAAAAATATATGATT+TGG - chr2.2:2978312-2978331 MS.gene051935:intron 5.0%
!!! AAATTTATTTTTACTAAAAA+TGG - chr2.2:2980864-2980883 MS.gene051935:CDS 5.0%
!!! ATATTATTTTTGATATATTA+TGG - chr2.2:2981486-2981505 MS.gene051935:intron 5.0%
AAAACAGCAGCCAGCACTAC+AGG + chr2.2:2977787-2977806 None:intergenic 50.0%
AAACCGATGGCCCTTCCTAA+CGG + chr2.2:2977656-2977675 None:intergenic 50.0%
AACGGCGAAGGCAATCATTC+GGG + chr2.2:2977638-2977657 None:intergenic 50.0%
ACTGTTTGTGGCGATGTGCA+TGG - chr2.2:2980006-2980025 MS.gene051935:CDS 50.0%
AGAGGTTGTTTGGTCACGAG+GGG + chr2.2:2981452-2981471 None:intergenic 50.0%
AGCTAGTGACCTCGCAATGA+AGG + chr2.2:2977320-2977339 None:intergenic 50.0%
AGTGATCCACAATCTCTCCC+TGG - chr2.2:2982071-2982090 MS.gene051935:intron 50.0%
ATCAATTGCAGTGGCAGACG+AGG + chr2.2:2982874-2982893 None:intergenic 50.0%
ATTGCCTTCGCCGTTAGGAA+GGG - chr2.2:2977643-2977662 MS.gene051935:CDS 50.0%
ATTGTTGGGGTATGGAGGGA+AGG - chr2.2:2977412-2977431 MS.gene051935:CDS 50.0%
CAACACAATTCCTCTGCCCT+TGG - chr2.2:2976650-2976669 MS.gene051935:CDS 50.0%
CAGCTGCTTGCAACCTTGTT+TGG - chr2.2:2979549-2979568 MS.gene051935:intron 50.0%
CCCCAATCCCTCCACATAAA+TGG + chr2.2:2980378-2980397 None:intergenic 50.0%
GAAGAGGTTGTTTGGTCACG+AGG + chr2.2:2981454-2981473 None:intergenic 50.0%
GAATGATTGCCTTCGCCGTT+AGG - chr2.2:2977638-2977657 MS.gene051935:CDS 50.0%
GAGCTAGACTCACGAAGACA+AGG - chr2.2:2980774-2980793 MS.gene051935:intron 50.0%
GATGTCGAGCCACGATATTC+AGG - chr2.2:2979706-2979725 MS.gene051935:intron 50.0%
GCACATTGGGCTCGTTTGTT+TGG - chr2.2:2978106-2978125 MS.gene051935:intron 50.0%
GCATCTGTTTCCTGTAGTGC+TGG - chr2.2:2977774-2977793 MS.gene051935:intron 50.0%
TCAATTGCAGTGGCAGACGA+GGG + chr2.2:2982873-2982892 None:intergenic 50.0%
TGGCTATTGCTCATTCACGC+TGG - chr2.2:2978865-2978884 MS.gene051935:intron 50.0%
TGGGATTGTTGGGGTATGGA+GGG - chr2.2:2977408-2977427 MS.gene051935:CDS 50.0%
TGTGGGTGCACACATAGTGA+TGG - chr2.2:2978809-2978828 MS.gene051935:intron 50.0%
TTGGCATACTACTGTGTGGG+TGG - chr2.2:2977467-2977486 MS.gene051935:CDS 50.0%
TTGGGATTGTTGGGGTATGG+AGG - chr2.2:2977407-2977426 MS.gene051935:CDS 50.0%
TTGTTCGCGGAATGCGTAGA+TGG + chr2.2:2979286-2979305 None:intergenic 50.0%
! AGGTGAATATGTGGGGTGTC+GGG + chr2.2:2980559-2980578 None:intergenic 50.0%
! CTGCGAGTTGAGACAGAGTT+TGG + chr2.2:2976697-2976716 None:intergenic 50.0%
! GCGAGGTCACTAGCTTGATA+TGG - chr2.2:2977325-2977344 MS.gene051935:intron 50.0%
!! ACCCTTAAGGATTGGTCGAG+AGG - chr2.2:2977268-2977287 MS.gene051935:intron 50.0%
!! CTCAACTCGCAGTTTTGTGC+AGG - chr2.2:2976705-2976724 MS.gene051935:intron 50.0%
!! GGCGATGGGTGCTTTTGTTT+TGG - chr2.2:2982113-2982132 MS.gene051935:intron 50.0%
!! GGTGCCAAAGCGTTTTATGG+TGG - chr2.2:2982810-2982829 MS.gene051935:intron 50.0%
!! GGTGGTGCCAAAGCGTTTTA+TGG - chr2.2:2982807-2982826 MS.gene051935:intron 50.0%
!! TTGGAGGCTTGGTGCACATT+GGG - chr2.2:2978093-2978112 MS.gene051935:intron 50.0%
!!! CCCACTTAGTTTTTGGCAGC+TGG - chr2.2:2977866-2977885 MS.gene051935:CDS 50.0%
ATGCGACCAAGCAAGGCCAA+GGG + chr2.2:2976669-2976688 None:intergenic 55.0%
ATGCGGTGAAGTCGAGTGTC+TGG - chr2.2:2980698-2980717 MS.gene051935:intron 55.0%
CAATGTGCACCAAGCCTCCA+AGG + chr2.2:2978094-2978113 None:intergenic 55.0%
CCACAATCTCTCCCTGGAAG+AGG - chr2.2:2982077-2982096 MS.gene051935:intron 55.0%
CCTCTTCCAGGGAGAGATTG+TGG + chr2.2:2982080-2982099 None:intergenic 55.0%
CGCTGTGAGCTTAGCTCACT+TGG - chr2.2:2980491-2980510 MS.gene051935:intron 55.0%
GATTGCCTTCGCCGTTAGGA+AGG - chr2.2:2977642-2977661 MS.gene051935:CDS 55.0%
GCTTGCTTGGTCCTCTTCCA+GGG + chr2.2:2982091-2982110 None:intergenic 55.0%
GGGCAGAGGAATTGTGTTGC+CGG + chr2.2:2976649-2976668 None:intergenic 55.0%
GGTGTAGATGCGACCAAGCA+AGG + chr2.2:2976676-2976695 None:intergenic 55.0%
GGTTTAGGTAGCTGCGATGC+AGG + chr2.2:2976802-2976821 None:intergenic 55.0%
TGCCACCACAATCCGCCATA+TGG + chr2.2:2982742-2982761 None:intergenic 55.0%
TGCTGGAGTTGGGCTGTTCT+TGG + chr2.2:2979505-2979524 None:intergenic 55.0%
TTGTGGCGATGTGCATGGTC+AGG - chr2.2:2980011-2980030 MS.gene051935:CDS 55.0%
!! CACCATATGGCGGATTGTGG+TGG - chr2.2:2982737-2982756 MS.gene051935:intron 55.0%
!! CTTGGAGGCTTGGTGCACAT+TGG - chr2.2:2978092-2978111 MS.gene051935:intron 55.0%
!! GGTGAATATGTGGGGTGTCG+GGG + chr2.2:2980558-2980577 None:intergenic 55.0%
!! TTGTTTTTCTGGGCGGGTGC+TGG - chr2.2:2977749-2977768 MS.gene051935:intron 55.0%
AATATATGCAGGGGCCGGGC+CGG + chr2.2:2980734-2980753 None:intergenic 60.0%
ATGGCCCTTCCTAACGGCGA+AGG + chr2.2:2977650-2977669 None:intergenic 60.0%
CGCTTGCTTGGTCCTCTTCC+AGG + chr2.2:2982092-2982111 None:intergenic 60.0%
CTGGAATTCGAACTCCGGCC+CGG - chr2.2:2980717-2980736 MS.gene051935:intron 60.0%
GACCAAGCAAGCGTGGCGAT+GGG - chr2.2:2982099-2982118 MS.gene051935:intron 60.0%
GATGCGACCAAGCAAGGCCA+AGG + chr2.2:2976670-2976689 None:intergenic 60.0%
GGAAGAGGACCAAGCAAGCG+TGG - chr2.2:2982092-2982111 MS.gene051935:intron 60.0%
GGAGGTGGATGCTGTCAAGC+TGG - chr2.2:2977688-2977707 MS.gene051935:intron 60.0%
TCGCCGTTAGGAAGGGCCAT+CGG - chr2.2:2977650-2977669 MS.gene051935:CDS 60.0%
CACCCATCGCCACGCTTGCT+TGG + chr2.2:2982104-2982123 None:intergenic 65.0%
CCAAGCAAGGCCAAGGGCAG+AGG + chr2.2:2976663-2976682 None:intergenic 65.0%
GGACCAAGCAAGCGTGGCGA+TGG - chr2.2:2982098-2982117 MS.gene051935:intron 65.0%
!! CCTCTGCCCTTGGCCTTGCT+TGG - chr2.2:2976660-2976679 MS.gene051935:CDS 65.0%
!! GGGTGTCGGGGTTCGAACCT+CGG + chr2.2:2980546-2980565 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 2976637 2983115 2976637 ID=MS.gene051935
chr2.2 mRNA 2976637 2983115 2976637 ID=MS.gene051935.t1;Parent=MS.gene051935
chr2.2 exon 2982920 2983115 2982920 ID=MS.gene051935.t1.exon1;Parent=MS.gene051935.t1
chr2.2 CDS 2982920 2983115 2982920 ID=cds.MS.gene051935.t1;Parent=MS.gene051935.t1
chr2.2 exon 2981075 2981167 2981075 ID=MS.gene051935.t1.exon2;Parent=MS.gene051935.t1
chr2.2 CDS 2981075 2981167 2981075 ID=cds.MS.gene051935.t1;Parent=MS.gene051935.t1
chr2.2 exon 2980858 2980911 2980858 ID=MS.gene051935.t1.exon3;Parent=MS.gene051935.t1
chr2.2 CDS 2980858 2980911 2980858 ID=cds.MS.gene051935.t1;Parent=MS.gene051935.t1
chr2.2 exon 2980225 2980374 2980225 ID=MS.gene051935.t1.exon4;Parent=MS.gene051935.t1
chr2.2 CDS 2980225 2980374 2980225 ID=cds.MS.gene051935.t1;Parent=MS.gene051935.t1
chr2.2 exon 2979937 2980045 2979937 ID=MS.gene051935.t1.exon5;Parent=MS.gene051935.t1
chr2.2 CDS 2979937 2980045 2979937 ID=cds.MS.gene051935.t1;Parent=MS.gene051935.t1
chr2.2 exon 2979720 2979837 2979720 ID=MS.gene051935.t1.exon6;Parent=MS.gene051935.t1
chr2.2 CDS 2979720 2979837 2979720 ID=cds.MS.gene051935.t1;Parent=MS.gene051935.t1
chr2.2 exon 2978540 2978687 2978540 ID=MS.gene051935.t1.exon7;Parent=MS.gene051935.t1
chr2.2 CDS 2978540 2978687 2978540 ID=cds.MS.gene051935.t1;Parent=MS.gene051935.t1
chr2.2 exon 2977807 2978055 2977807 ID=MS.gene051935.t1.exon8;Parent=MS.gene051935.t1
chr2.2 CDS 2977807 2978055 2977807 ID=cds.MS.gene051935.t1;Parent=MS.gene051935.t1
chr2.2 exon 2977576 2977704 2977576 ID=MS.gene051935.t1.exon9;Parent=MS.gene051935.t1
chr2.2 CDS 2977576 2977704 2977576 ID=cds.MS.gene051935.t1;Parent=MS.gene051935.t1
chr2.2 exon 2977403 2977503 2977403 ID=MS.gene051935.t1.exon10;Parent=MS.gene051935.t1
chr2.2 CDS 2977403 2977503 2977403 ID=cds.MS.gene051935.t1;Parent=MS.gene051935.t1
chr2.2 exon 2977159 2977233 2977159 ID=MS.gene051935.t1.exon11;Parent=MS.gene051935.t1
chr2.2 CDS 2977159 2977233 2977159 ID=cds.MS.gene051935.t1;Parent=MS.gene051935.t1
chr2.2 exon 2976637 2976696 2976637 ID=MS.gene051935.t1.exon12;Parent=MS.gene051935.t1
chr2.2 CDS 2976637 2976696 2976637 ID=cds.MS.gene051935.t1;Parent=MS.gene051935.t1
Gene Sequence

>MS.gene051935

ATGTCTTCTCCGGCAACACAATTCCTCTGCCCTTGGCCTTGCTTGGTCGCATCTACACCAAACTCTGTCTCAACTCGCAGTTTTGTGCAGGCCACCGTTGCATCACAATCAAAGGTTTCCAAGATGTTTGCTCAAGCCTTGTTGTTTAACTCGTGCAATATTCCTGCATCGCAGCTACCTAAACCTTGTTTCAAAGGTGAGCAAATCTCAATCAAAGGATAACTAGCTAAGTACTAGTACTAGTTTATGAAAATTTGTTTCTGTTTTCATCTTGGAAATGTTATTTTTTTTTTCCTTAATTAGTTTATGGTAATCTTGGAAATTGATTTTATACTTGCATATGCGTCGAATTAGTTATTCCTTCGAATTTCCGACCTGTTTGATGTTGTATTTACAGTTGGAAATTGGCTGCAAAACGAGCAGAATTAGTCTTAGAATTTTTTTGTAGTCAACTTAGATATACATTTATATAATCAAAATAGTTTACAAATTAATTATTGGGTTGAAATTTTTTTAGTGTTGATAAAATCACGATCATTTTCAACAAACAAAATATAATAATCACTATCATCTAAGTTAGTTTCAACATAAATATTAGATTTAAATGCAATTTATCCCTTGAAACAAACGCACCCTTAAGGATTGGTCGAGAGGAAGGAAGAATCAAGTAAACATCTTTTCCTTCATTGCGAGGTCACTAGCTTGATATGGCAAAAGGTAATGAATTGGATGGAATTTTCTTTTATCACTCCTCCTAATTTGTTGATTCATTGGGATTGTTGGGGTATGGAGGGAAGGAATAAGAAAGCTCTTAAGGGATTATGGCTTATTTGGCATACTACTGTGTGGGTGGTATGGCAAGTAAGAAATAACAAAATTTTCAAGGATGACGTTTGTGGAATTGAGGAAATTGTGGAGAAGATCAAAGTGCTCTCATGGAGATGGAGTCTAACTAGACTTAAGATTCCTACTTGTATGTTCTACGAATGGTGTTGGAACCCGAATGATTGCCTTCGCCGTTAGGAAGGGCCATCGGTTTTGTTATAGGTATGGAGGTGGATGCTGTCAAGCTGGTCTGCAGTGCAGACTGCTGTTTTTTGCTTCTGCTGTGTTTGTTTTTCTGGGCGGGTGCTGGTAGCATCTGTTTCCTGTAGTGCTGGCTGCTGTTTTTTACGCCCATTTGTTTTTTGGCAGTTTTTTTCTAGGTGTGTGCTGGGTATTTTGTAAAGCCCACTTAGTTTTTGGCAGCTGGTGTGTGTTTGCTGTTTTTTTTAGTTATGTGGGGGGGTGCACTGCCTTTGTAAGTCGTCCGCTCTATCGTTTTTCTTGTATTTTTAGCAAGTCTTGCGCTTCTTGTGCAGTCGTTGCATTAATAATATTGGCTGGTTCAAAAAAAAAAAAACACTCTTATTAGGTTTTTGGTGAAGCCCCGTATTAACACTCTTTATCTAAAGCCTTGGAGGCTTGGTGCACATTGGGCTCGTTTGTTTGGGATTTAAGCATGTTTGTTTTGCTGTGTCTGCATATTGAGCTCCTTATTATTTTAACGGTGTTCATATTAAATTAAAAAAGATTTTAACAAAAAAATATTTTTAACCTTTAAATGGAGATATATGATTCCATTAAGATATTTAACCTTTAAATGGAGATATTTGATTCCTTTAAGATATGTTTCTAAAATAAAAATATATGATTTGGATTTAGCCTAAATAAATTATAAACAAGAGACTAGACATTGTTTATGGGAAGGAGAACAAGAGAAAGTAAACGTTTGCGAAATCGGTATGTTATTTTTTATAATTTTTTTCTTCTTCTTTCATTGAGGCGTTGATAATTTATCTTTGTGTATATGTATATGCTCCTTTTTCTCTCTCGTTGGTTTCCATAACTATTATGTTTTTCATAAGGGAGTAATATTTATATGCGTGGTGCCTCAATTTCGTAACAGTTTTCAAAGAAAGAGAGAGACTCATGACACTGCAGTGTAGATTCTCAATAGATGATGCGAAATATGATGATGATGGTCGCATAAATCGAACAGGTTTGTATCTTGTGTGACCAAATACACCAAGTCAATTAAAATTTTTGTTTTTATTTTTATTTTCACATGTTATAATGTTGTTATTTTAACATTGATAAATAATTGAATGAGCATGAAGGAACGTTGTTAATTGTGGGTGCACACATAGTGATGGTTGTAATAGGATCTGGAGTGTTGTCATTGGCATTGGCTATTGCTCATTCACGCTGGATTAAAGGTAATTAATTACTTACGAAGTTCAAATTTTAATGTATATGCCCAATAGGAAGTACTCTCATGTTCCATAAAATACCTTAATCGTCAAGTTTTTTCCTCACAAACCTTTCCATAAGTACTTGAGAGTAGAGAAATTTTATGCATGTTGGTTTTTTGATGTTTGCATACTTCACTATAAATTATCACTCTTGCAATTGTGGTTGGTTTGCTAGTTGTTGCTCCATTAGGCATGGTATAAGCTTATCAAACAAGACCTAAAACCAATTAATCCTAGGATGATTGATCCTAATTCATTTGAGATTTTTGAAACAAGTCAAGTGGAATCATTATCAATAATGCATTAGGAAATAGTGGATGCTATGTACTTTTTAGTTTACTTGTAGTATAAACCATCTACGCATTCCGCGAACAAATAAAGAAAATATATGTTGTGTGAATTGCTTATTTTATTTTTTATTTTTTTGAATGACAAATATGAAATTAGATAAGAAAGGGAAGAAACATACAAGGAGTACAAGTACAAGAAGTATCGAGGTCCAAGACCATCACAAAACAAAAATAAAACAACCAAAAGCAAAGACAAAAAGCAACATGGAAAAGACAACAAGCCAAGAACAGCCCAACTCCAGCACTTGTATGTATCTCTTATTATTTTCAGCTGCTTGCAACCTTGTTTGGATTTTTTCTTGTGATTTTCAATTACTGCCTTGATTGGCATCTAAAAACTATGCCCCATTTAGAAGATTGTTGCGTATATATGCATTTGATTTCACATGACATGAAAATATTTTGGTTTTTTTATTTCGCTAATAGATGTCGAGCCACGATATTCAGGATCAAGAATAGAAGGAGATACTATTACTTTGGATTTCGTAAAGAAAATGATGAATGATTTCAAGGAACAGAAGTGCTTGGATAGAGGGTATTGAAGTAATAAGATTTTTTTTTTTGTGAAACTGTTTGTACTTTTCTTGAAGTGTTGTTGAAATGTATTTGCATTTGTCCTGGTTCATTGTTTTAGGTATGCATCCAAGATTTTGTTGCAAACAAAAAAGGTTTTGAAAGCTTTGCCTTCTCTTGTTGACATAACTGTTCCTCATGGAAAACATGTTACTGTTTGTGGCGATGTGCATGGTCAGGTAATTGGTATATGACAATTGCTCCCTTGGTTTATTATTTGCGAAAACAATTGTTGCTAGTAACTTCAAGGTGGTTCTTTGTTACGTAGATATTTGGAGGATAGGGTTGTTCTCACACCATCATTGATTTTTTCTTATATAACTTTTATTGACTCAATCTTTTTCAAATTTGAATTTAAATTTTATTTACACTTTGATCACAGGAAACTTCAAAACTAAATACCTATTATCTTGCTATTCTATAACAAACTTTAAACTAACAATATAATAAAAGATTTAAATAGACGAACACGTTAGCGTGTGTCTCTCTTTCTGTTATGTTCATAAAGTAAATTTCTTTGACCATTTATGTGGAGGGATTGGGGAGCTATTTTTTTAGGGGAGGGAGCTATATTTTTTGTTGATGAACTTGTTAGTTAATATTTTTTATGGGGCTATCTAATATGGGTCAGATCTGTCGCTGTGAGCTTAGCTCACTTGGTAAGGGCTAATGCATAATTTATGCAGGAGCCGAGGTTCGAACCCCGACACCCCACATATTCACCTTTAAGGTAAATTTCTCTAGCCGCTAGGCTACTTGACTAAAAAAAAAAAAATGGGTCAGATCTAAAGGTAGATCATTTTTTTGGTCAAGTATCCTAGTTGCTGGAACTCATACATTTTAAATGCGGTGAAGTCGAGTGTCTGGAATTCGAACTCCGGCCCGGCCCCTGCATATATTATACATTCTTCCTTTCAACTGAGCTAGACTCACGAAGACAAGGTGAATCCTTCTATTCCTGACAAATTTTAATAAAATATTATATGCATACGCTATTTTTTATCATTATAAAATTTATTTTTACTAAAAATGGTAAAGGTCCATATTTATACATTTTCTGAGAGGACATTTAGATTATTTTTGCCTCATGTGTACGGAGGATTTAATTTCCTTGTTGAATTTATTTCCATTTATTCTGATTATACATGTTTGGCTAACTTTATTTAACTACCAACCCTTTCAATTTTATTTTTCATGACTCCTGCATGCAGTTCTATGATCTTTTGAATATTTTTGAGCTCAATGGGCTTCCTTCAGAAGAAAATCCATATCTATTTAATGGTGACTTTGTAGATAGAGGATCATTTTCAGTGGAAGTCGCATTCACTTTGTTTGCATTTAAGTGCATGTCTCCATCTGGTAAACCCTAGCTCTTTCGTTATTAGCCTGTTAGGTTTTCTTTTTACCAAAGAATGTGTTGTGCAAGTGTGAGATGAGTTAGAAGTCCCGTATTAATTATTTGGAAAAAAGGACATTGAGCAACATATAAATGAGAGGATCTATAAACTATATGACTTACGGTTTTACGTAAAAATGTGCTGTAACTCACTTGTGTAATTGCTTTTGGGCAATGCGGATAATTCTCTAAATTAACTCCCCTCGTGACCAAACAACCTCTTCTTAGGTTTCATTATATTATTTTTGATATATTATGGATTATTTAATTTATCATCTCCTATCACCTGATTAGATGCTTAATTTATTAACTTATTTTTCAATTGAATTGTATAATCAATAATGCTTATTTTGTGTGGTTGGATTTTCGTAAATATTATACTCCTCTTTTCACTTCACTTAGTTAGCTGGGATGTTGTAACTTGTTTTGCTTCTATATTATTCTCAGCCATGTATATAGCTAGAGGAAATCATGAGAGCAAGAGCATGAACAAGATATTTGGTTTTGAGGGTGAGGTGCGCTCAAAGTTGAATGACAAATTTGTCAAAATGTTTGCGGAAGTATTCAACTGTTTACCTTTAGCTCATGTGATAAACAAGAAAATTTTCGTCGTCCATGGAGGCCTTTTTAGTGTTGATGGGGTCAAACTCTCTCAAATCCGATCAATTAATCGGTTTTGTGAGCCTCCTGATGAAGGTAAGACACATAATTTTATTTTTTTTTCTTGCTATTCATCATAATCCTTAATACTTCTTTGTATTGTAGTTTTGTTTATGTATCTATGTTTGGTATGTGTAGGGTTGATGCATGACTTGCTATGGAGTGATCCACAATCTCTCCCTGGAAGAGGACCAAGCAAGCGTGGCGATGGGTGCTTTTGTTTTGGTGAGGATGTTACAAAAAGGTTCTTGAAGGATAATAATTTAGGTATGTTTTCCATTTGTTTGATACTTAATTTCTTATTTCACTGGTGACTTGATATGAATTATCATTTTACAGATTTAGTTGTGAGATCTCATAAATCAAAGCACAAGGGTTATGAGATTCAACATGACGGTAAACTCATAACTGTATTTTCTGCTCCAAATTACTGTGATCAGGTAACCATGTCTCTTCTGTTACAACCTTCTTTCTTGAATAATTTTACGGCATGTGCAGGAAAATTATTGAGTTGTGACCGTGCCACACGCTTATGATATTAATGTATGTAAGTAATCACTTATACTCCCATGAAGTATACATATCCTGATTTTCCATTATTTTATGCAGAAGGGTAACAAAGGTGCCTTTATTCGATTTGAAGCACCTGATTTGAAACCTAACATTATTACATTTGAAGCAGTGGTTAGTATCTTTCATAATTTGAAGTCTGTCATCTTATATTATCTTTCATAATTTGAAATCTGTCATGTTATATTATGTATAGTCATTATAATAAAAAATGAAAAAGGAAAAGAATCAGTGTTGTTAAATATGGGCTATTGAAACACCATATGGCGGATTGTGGTGGCAGATTCTTTCACTAGTGTAGTGTCATATTGCCAATTTGTGAATGATGGTGGTGCCAAAGCGTTTTATGGTGGATATGGTGGCTTAGAATGTCGAATTCTTGGCTTCTGGCCCTCGTCTGCCACTGCAATTGATAACACTGAAAATAATTAACAAAAGTATATAACTCTTCATTTCATGTTACAATCATTCTGTTGCACTGTGATTAAATTATACATATCTTCATTCAATTTGTGAGGTTATGTCTGGTGTTGACATACTTTCTTCTTGGATTGGTTCACTTTATTGAATTTGCAGCCACACCCTGATGTTAAGCCAATGGCTTATGCAAACAACTTCAACCGATTGTTCTCATAA

Protein sequence

>MS.gene051935.t1

MSSPATQFLCPWPCLVASTPNSVSTRSFVQATVASQSKVSKMFAQALLFNSCNIPASQLPKPCFKVFKERERLMTLQCRFSIDDAKYDDDGRINRTGSGVLSLALAIAHSRWIKDKKGKKHTRSTSTRSIEVQDHHKTKIKQPKAKTKSNMEKTTSQEQPNSSTYVEPRYSGSRIEGDTITLDFVKKMMNDFKEQKCLDRGYASKILLQTKKVLKALPSLVDITVPHGKHVTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSVEVAFTLFAFKCMSPSAMYIARGNHESKSMNKIFGFEGEVRSKLNDKFVKMFAEVFNCLPLAHVINKKIFVVHGGLFSVDGVKLSQIRSINRFCEPPDEGLMHDLLWSDPQSLPGRGPSKRGDGCFCFGEDVTKRFLKDNNLDLVVRSHKSKHKGYEIQHDGKLITVFSAPNYCDQKGNKGAFIRFEAPDLKPNIITFEAVPHPDVKPMAYANNFNRLFS