Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063483.t1 | XP_013457978.1 | 99.1 | 912 | 8 | 0 | 1 | 912 | 1 | 912 | 0.00E+00 | 1728 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063483.t1 | P42730 | 86.1 | 913 | 120 | 4 | 1 | 912 | 1 | 907 | 0.0e+00 | 1524.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063483.t1 | A0A072UQA8 | 99.1 | 912 | 8 | 0 | 1 | 912 | 1 | 912 | 0.0e+00 | 1728.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063483.t1 | MTR_4g109450 | 99.452 | 912 | 5 | 0 | 1 | 912 | 1 | 912 | 0.0 | 1829 |
MS.gene063483.t1 | MTR_4g109450 | 99.510 | 816 | 4 | 0 | 1 | 816 | 1 | 816 | 0.0 | 1638 |
MS.gene063483.t1 | MTR_7g028970 | 87.281 | 912 | 110 | 2 | 1 | 912 | 1 | 906 | 0.0 | 1599 |
MS.gene063483.t1 | MTR_7g012820 | 51.438 | 869 | 394 | 9 | 1 | 853 | 83 | 939 | 0.0 | 872 |
MS.gene063483.t1 | MTR_7g012820 | 51.438 | 869 | 394 | 9 | 1 | 853 | 12 | 868 | 0.0 | 871 |
MS.gene063483.t1 | MTR_6g013660 | 51.557 | 867 | 396 | 8 | 1 | 853 | 79 | 935 | 0.0 | 867 |
MS.gene063483.t1 | MTR_3g106160 | 49.107 | 896 | 426 | 12 | 5 | 883 | 95 | 977 | 0.0 | 821 |
MS.gene063483.t1 | MTR_2g099075 | 71.908 | 477 | 124 | 3 | 400 | 875 | 4 | 471 | 0.0 | 671 |
MS.gene063483.t1 | MTR_8g100040 | 45.478 | 774 | 334 | 11 | 131 | 886 | 222 | 925 | 0.0 | 652 |
MS.gene063483.t1 | MTR_3g102830 | 46.205 | 751 | 325 | 10 | 126 | 858 | 218 | 907 | 0.0 | 645 |
MS.gene063483.t1 | MTR_3g498725 | 46.515 | 746 | 320 | 12 | 131 | 858 | 218 | 902 | 0.0 | 644 |
MS.gene063483.t1 | MTR_3g098310 | 43.855 | 716 | 324 | 12 | 162 | 860 | 296 | 950 | 0.0 | 563 |
MS.gene063483.t1 | MTR_2g006950 | 68.333 | 420 | 93 | 7 | 461 | 878 | 1 | 382 | 0.0 | 545 |
MS.gene063483.t1 | MTR_2g006950 | 71.371 | 248 | 51 | 3 | 657 | 901 | 365 | 595 | 1.05e-106 | 342 |
MS.gene063483.t1 | MTR_3g098310 | 45.389 | 553 | 235 | 10 | 162 | 707 | 296 | 788 | 7.93e-145 | 449 |
MS.gene063483.t1 | MTR_3g461000 | 45.697 | 337 | 178 | 3 | 534 | 867 | 427 | 761 | 1.90e-101 | 335 |
MS.gene063483.t1 | MTR_3g461000 | 35.109 | 413 | 253 | 7 | 4 | 404 | 3 | 412 | 6.58e-67 | 239 |
MS.gene063483.t1 | MTR_7g096480 | 72.674 | 172 | 23 | 2 | 716 | 887 | 96 | 243 | 5.05e-76 | 248 |
MS.gene063483.t1 | MTR_7g096480 | 53.906 | 128 | 26 | 1 | 530 | 657 | 1 | 95 | 5.34e-33 | 128 |
MS.gene063483.t1 | MTR_6g048860 | 48.810 | 168 | 83 | 2 | 127 | 292 | 99 | 265 | 6.88e-45 | 166 |
MS.gene063483.t1 | MTR_5g098360 | 77.895 | 95 | 20 | 1 | 558 | 652 | 74 | 167 | 5.63e-41 | 148 |
MS.gene063483.t1 | MTR_1614s0010 | 41.709 | 199 | 109 | 3 | 638 | 835 | 1 | 193 | 2.49e-31 | 122 |
MS.gene063483.t1 | MTR_1g076440 | 61.628 | 86 | 33 | 0 | 631 | 716 | 158 | 243 | 5.15e-30 | 121 |
MS.gene063483.t1 | MTR_1g057150 | 28.239 | 301 | 182 | 11 | 20 | 292 | 26 | 320 | 9.33e-22 | 101 |
MS.gene063483.t1 | MTR_1g090640 | 27.273 | 297 | 181 | 11 | 17 | 285 | 24 | 313 | 3.28e-17 | 87.4 |
MS.gene063483.t1 | MTR_4g129230 | 31.364 | 220 | 108 | 8 | 26 | 208 | 32 | 245 | 2.03e-14 | 78.2 |
MS.gene063483.t1 | MTR_2g038200 | 29.845 | 258 | 144 | 9 | 20 | 241 | 26 | 282 | 1.01e-13 | 76.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063483.t1 | AT1G74310 | 86.585 | 902 | 114 | 4 | 1 | 901 | 1 | 896 | 0.0 | 1601 |
MS.gene063483.t1 | AT1G74310 | 87.868 | 816 | 96 | 1 | 1 | 816 | 1 | 813 | 0.0 | 1477 |
MS.gene063483.t1 | AT5G15450 | 50.579 | 864 | 408 | 8 | 1 | 853 | 77 | 932 | 0.0 | 858 |
MS.gene063483.t1 | AT4G14670 | 66.970 | 660 | 176 | 5 | 1 | 658 | 1 | 620 | 0.0 | 850 |
MS.gene063483.t1 | AT2G25140 | 49.542 | 874 | 415 | 8 | 1 | 859 | 83 | 945 | 0.0 | 838 |
MS.gene063483.t1 | AT5G50920 | 46.577 | 745 | 320 | 12 | 131 | 858 | 221 | 904 | 0.0 | 644 |
MS.gene063483.t1 | AT3G48870 | 45.845 | 746 | 325 | 9 | 131 | 858 | 210 | 894 | 0.0 | 632 |
MS.gene063483.t1 | AT3G48870 | 45.845 | 746 | 325 | 9 | 131 | 858 | 241 | 925 | 0.0 | 632 |
MS.gene063483.t1 | AT3G48870 | 45.845 | 746 | 325 | 9 | 131 | 858 | 241 | 925 | 0.0 | 632 |
MS.gene063483.t1 | AT3G48870 | 45.845 | 746 | 325 | 9 | 131 | 858 | 241 | 925 | 0.0 | 632 |
MS.gene063483.t1 | AT5G51070 | 38.624 | 901 | 436 | 19 | 4 | 851 | 81 | 917 | 0.0 | 559 |
MS.gene063483.t1 | AT4G14675 | 49.324 | 148 | 43 | 1 | 720 | 867 | 1 | 116 | 5.15e-42 | 151 |
MS.gene063483.t1 | AT3G45450 | 47.727 | 176 | 74 | 3 | 176 | 350 | 151 | 309 | 7.02e-41 | 154 |
MS.gene063483.t1 | AT3G52490 | 31.399 | 293 | 163 | 12 | 20 | 293 | 26 | 299 | 9.39e-23 | 105 |
MS.gene063483.t1 | AT5G57710 | 30.213 | 235 | 134 | 10 | 26 | 234 | 32 | 262 | 2.89e-15 | 81.3 |
MS.gene063483.t1 | AT1G07200 | 26.875 | 160 | 108 | 3 | 570 | 728 | 68 | 219 | 3.28e-11 | 67.0 |
Find 209 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAACCTTTCTTTCTCATTT+TGG | 0.103964 | 8.4:+18157543 | None:intergenic |
CATCTCTTGAGTGGACTTTC+AGG | 0.168367 | 8.4:-18156893 | MS.gene063483:CDS |
AAGAACAATCCTGTTCTTAT+TGG | 0.183649 | 8.4:-18159084 | MS.gene063483:CDS |
TTTCAAGCATTGAAGACTTA+TGG | 0.255904 | 8.4:-18159201 | MS.gene063483:CDS |
GGGAAGCTTGATCCTGTTAT+TGG | 0.264082 | 8.4:-18159156 | MS.gene063483:CDS |
TTCTTATTCCTTGGTCCAAC+TGG | 0.268223 | 8.4:-18157398 | MS.gene063483:CDS |
CTCTCTAGCCACCTTCTAAT+TGG | 0.271216 | 8.4:+18156499 | None:intergenic |
ATGAGATTCATCTTGTTCTT+GGG | 0.276920 | 8.4:-18158846 | MS.gene063483:CDS |
TCCAGTCGGTTCAACAATTC+TGG | 0.285531 | 8.4:+18156809 | None:intergenic |
GATGAGATTCATCTTGTTCT+TGG | 0.287438 | 8.4:-18158847 | MS.gene063483:CDS |
AAGCCGGTGTTGCTGTTTCT+AGG | 0.291735 | 8.4:-18159296 | MS.gene063483:CDS |
GGCTAACAACCTCGGCTATT+TGG | 0.297052 | 8.4:+18157597 | None:intergenic |
TAGGTTAATTGCTTTGGATA+TGG | 0.306154 | 8.4:-18158974 | MS.gene063483:CDS |
TCTTCGTCGCGTCCAATAAC+AGG | 0.320228 | 8.4:+18159144 | None:intergenic |
CAAGCAATTTCAAACGTTGC+TGG | 0.347559 | 8.4:-18159540 | MS.gene063483:CDS |
AGCTGTTGATCAGTTAATCT+TGG | 0.350267 | 8.4:-18159358 | MS.gene063483:CDS |
GGGATTGTTAATGCTGAAAC+TGG | 0.353298 | 8.4:-18156355 | MS.gene063483:CDS |
AAGGCAGAACTGTGGACTTT+AGG | 0.354025 | 8.4:-18156955 | MS.gene063483:CDS |
TTGTTTCTTGTGTAGGTGTA+TGG | 0.362917 | 8.4:-18156529 | MS.gene063483:intron |
TGGTTGCTGGTGCGAAGTAT+AGG | 0.370808 | 8.4:-18158945 | MS.gene063483:CDS |
AGGAAGTAAGAAGGCATTTC+AGG | 0.374785 | 8.4:-18156832 | MS.gene063483:CDS |
ACTGGTTCCTTCTTATTCCT+TGG | 0.375288 | 8.4:-18157407 | MS.gene063483:CDS |
TTGAGATCAAGAGCTGGTTT+AGG | 0.379830 | 8.4:-18157446 | MS.gene063483:CDS |
AGGTTAATTGCTTTGGATAT+GGG | 0.380520 | 8.4:-18158973 | MS.gene063483:CDS |
AGAGCTGCGGACCTGCGATA+TGG | 0.381156 | 8.4:-18157719 | MS.gene063483:CDS |
ATATCGCAGGTCCGCAGCTC+TGG | 0.381186 | 8.4:+18157721 | None:intergenic |
GAGGGGTAAAGATGGGAAAA+AGG | 0.388224 | 8.4:-18159250 | MS.gene063483:CDS |
GATATGGGAGCACTGGTTGC+TGG | 0.390282 | 8.4:-18158958 | MS.gene063483:CDS |
CTAGCAATCTTGCTGATGTT+AGG | 0.395088 | 8.4:-18158993 | MS.gene063483:CDS |
CTCAATTGCTCATGTGATAG+AGG | 0.400181 | 8.4:+18156767 | None:intergenic |
GGTTGCTGGTGCGAAGTATA+GGG | 0.400576 | 8.4:-18158944 | MS.gene063483:CDS |
CCTGTTCTTATTGGTGAGCC+TGG | 0.401053 | 8.4:-18159075 | MS.gene063483:CDS |
TGATGTTAGGTTAATTGCTT+TGG | 0.410605 | 8.4:-18158980 | MS.gene063483:CDS |
ACCGAAAAGTGATGCTGTTC+AGG | 0.411960 | 8.4:-18156296 | MS.gene063483:CDS |
GCTGTTGATCAGTTAATCTT+GGG | 0.422333 | 8.4:-18159357 | MS.gene063483:CDS |
TAGAATTGATGCAAGGTGTA+AGG | 0.422834 | 8.4:+18159590 | None:intergenic |
GTGCTACCAGGCACTTCATC+TGG | 0.425997 | 8.4:+18159444 | None:intergenic |
AAGATGCAGCATTTGAAAGA+AGG | 0.427986 | 8.4:-18158705 | MS.gene063483:CDS |
CTTCTCCAAGTCTTGGATGA+TGG | 0.430205 | 8.4:-18156995 | MS.gene063483:CDS |
TGTGGCTGAACCTAGTGTTC+CGG | 0.430850 | 8.4:-18158668 | MS.gene063483:CDS |
CAGCAACGTTTGAAATTGCT+TGG | 0.431831 | 8.4:+18159541 | None:intergenic |
CACTCTGTATCAAGATTGAT+TGG | 0.432459 | 8.4:-18157278 | MS.gene063483:CDS |
TTCCTTGGTCCAACTGGTGT+TGG | 0.432663 | 8.4:-18157392 | MS.gene063483:CDS |
CGTGGACAGCTTCGATGTAT+TGG | 0.435873 | 8.4:-18158766 | MS.gene063483:CDS |
TCAAGATTGTCAATTTCCTC+AGG | 0.437119 | 8.4:+18158334 | None:intergenic |
TGCTTTGGATATGGGAGCAC+TGG | 0.439570 | 8.4:-18158965 | MS.gene063483:CDS |
ATTTGAAAGAAGGTTTCAAC+AGG | 0.441868 | 8.4:-18158695 | MS.gene063483:CDS |
ATTCATCTTGTTCTTGGGGC+TGG | 0.444791 | 8.4:-18158841 | MS.gene063483:CDS |
GTCAATTAACAGAAGCTGTA+AGG | 0.446297 | 8.4:-18157084 | MS.gene063483:CDS |
ATGCTCAGCACCAAGGTTAG+AGG | 0.449435 | 8.4:+18156913 | None:intergenic |
TTACATTGATGCTGGTCCTA+AGG | 0.450753 | 8.4:-18156413 | MS.gene063483:CDS |
AAAACAAACGAAGCACTTGC+TGG | 0.455382 | 8.4:-18159657 | MS.gene063483:CDS |
ACTAAATCAATCGCCTTGTC+AGG | 0.457433 | 8.4:+18158400 | None:intergenic |
GGAAGTTGATGATGATGAAA+TGG | 0.457919 | 8.4:-18156251 | MS.gene063483:CDS |
AAGGTTTCAACAGGTTTATG+TGG | 0.465704 | 8.4:-18158686 | MS.gene063483:CDS |
TGCTCGCGATCGAGTGATGC+AGG | 0.466652 | 8.4:-18156852 | MS.gene063483:CDS |
CACGAGCTAGCAATGACTTC+AGG | 0.466831 | 8.4:-18159630 | MS.gene063483:CDS |
TTCTCCAAGTCTTGGATGAT+GGG | 0.466986 | 8.4:-18156994 | MS.gene063483:CDS |
CTACAACGCTTGAGGAGTAT+AGG | 0.468012 | 8.4:-18158741 | MS.gene063483:CDS |
ATTCTCGAGGATTCTCAGAT+TGG | 0.468883 | 8.4:-18159333 | MS.gene063483:CDS |
AGAGCTCATCTTTGCACTAC+AGG | 0.471282 | 8.4:-18157768 | MS.gene063483:CDS |
TTGTCTAGTCGGTACATAAC+CGG | 0.472293 | 8.4:-18158553 | MS.gene063483:intron |
AATCTTGAAGGTAGCACTGA+TGG | 0.474434 | 8.4:-18157665 | MS.gene063483:CDS |
AATTGACATGTCGGAGTACA+TGG | 0.475392 | 8.4:-18157306 | MS.gene063483:CDS |
AGGTATGTTGGACATGAAGA+AGG | 0.476815 | 8.4:-18157109 | MS.gene063483:CDS |
AAAGAAAGGTTGGTTGGACT+TGG | 0.479433 | 8.4:-18157533 | MS.gene063483:CDS |
TTGGCTCAGAGGATTGTTAG+AGG | 0.480511 | 8.4:-18159024 | MS.gene063483:CDS |
ATTCTGATTCAGATTCCAAA+TGG | 0.480850 | 8.4:-18156319 | MS.gene063483:CDS |
CGAAGAATGCTAATTGTATC+CGG | 0.481651 | 8.4:+18158649 | None:intergenic |
CAACACTCTTCTCCAAGTCT+TGG | 0.482364 | 8.4:-18157002 | MS.gene063483:CDS |
TTGATAAGCGCGGTGCTACC+AGG | 0.482529 | 8.4:+18159432 | None:intergenic |
TAGAAGGTGGCTAGAGAGGA+AGG | 0.489310 | 8.4:-18156494 | MS.gene063483:CDS |
GGTGATTTGTTTAAAGAAGC+CGG | 0.497778 | 8.4:-18159312 | MS.gene063483:CDS |
CAATTAGAAGGTGGCTAGAG+AGG | 0.498681 | 8.4:-18156498 | MS.gene063483:CDS |
GGAAGACCTCAACAACCAAC+TGG | 0.500438 | 8.4:-18157425 | MS.gene063483:CDS |
AGAGACTTGGTTGAACAAGC+AGG | 0.500744 | 8.4:-18159177 | MS.gene063483:CDS |
AGTATAGTAAAGAGAAAGAG+AGG | 0.501091 | 8.4:-18157826 | MS.gene063483:CDS |
AATGAGAAAGAAAGGTTGGT+TGG | 0.503006 | 8.4:-18157539 | MS.gene063483:CDS |
AGATTGATTGGTGCACCACC+AGG | 0.503361 | 8.4:-18157266 | MS.gene063483:CDS |
CCAGGCTCACCAATAAGAAC+AGG | 0.503576 | 8.4:+18159075 | None:intergenic |
GATACAATTAGCATTCTTCG+TGG | 0.503772 | 8.4:-18158646 | MS.gene063483:CDS |
AGGTTGTGACAGAGCTGTCT+AGG | 0.503837 | 8.4:-18156474 | MS.gene063483:CDS |
CTTATTGGTGAGCCTGGTGT+TGG | 0.504009 | 8.4:-18159069 | MS.gene063483:CDS |
AGCCGGTGTTGCTGTTTCTA+GGG | 0.504464 | 8.4:-18159295 | MS.gene063483:CDS |
TGAGATTCATCTTGTTCTTG+GGG | 0.504648 | 8.4:-18158845 | MS.gene063483:CDS |
AGTTGAAGAAGCTGAAGGGA+AGG | 0.506548 | 8.4:-18158884 | MS.gene063483:CDS |
GAAAAGCTGAGGGGTAAAGA+TGG | 0.507731 | 8.4:-18159258 | MS.gene063483:CDS |
TGAATTTGAGGAGAGGTTGA+AGG | 0.507933 | 8.4:-18158920 | MS.gene063483:CDS |
AAAGAAGTTGAAGAAGCTGA+AGG | 0.507975 | 8.4:-18158889 | MS.gene063483:CDS |
TGGATTAAAAGAGAGATATG+AGG | 0.510884 | 8.4:-18158626 | MS.gene063483:CDS |
ACAACGGTTTACATTGATGC+TGG | 0.514218 | 8.4:-18156421 | MS.gene063483:CDS |
CTAATTGTATCCGGAACACT+AGG | 0.517001 | 8.4:+18158658 | None:intergenic |
CCAAAATGAGAAAGAAAGGT+TGG | 0.517592 | 8.4:-18157543 | MS.gene063483:CDS |
GAAGTATAGGGGTGAATTTG+AGG | 0.518020 | 8.4:-18158932 | MS.gene063483:CDS |
AGCTGTCCACGAGCAAGCAT+TGG | 0.520046 | 8.4:+18158778 | None:intergenic |
TACATTGATGCTGGTCCTAA+GGG | 0.520358 | 8.4:-18156412 | MS.gene063483:CDS |
ACCTCCCATCATCCAAGACT+TGG | 0.521134 | 8.4:+18156990 | None:intergenic |
TAGCCGATGGACTGGTATAC+CGG | 0.521383 | 8.4:-18157579 | MS.gene063483:CDS |
AGACTGCACACTAGAGTTGT+GGG | 0.523577 | 8.4:-18157506 | MS.gene063483:CDS |
AAAAGCTGAGGGGTAAAGAT+GGG | 0.524371 | 8.4:-18159257 | MS.gene063483:CDS |
GGCGATTGATTTAGTTGATG+AGG | 0.524818 | 8.4:-18158392 | MS.gene063483:CDS |
GCTTGGAAGAAAATACCGTT+AGG | 0.527952 | 8.4:+18159558 | None:intergenic |
GCATACCGTGTAGAAAAGAA+TGG | 0.529493 | 8.4:-18156379 | MS.gene063483:CDS |
ACAACCTCGGCTATTTGGTC+CGG | 0.530467 | 8.4:+18157602 | None:intergenic |
TATGCTAAATCACTTCCCTT+AGG | 0.532281 | 8.4:+18156397 | None:intergenic |
TTACTATACTTCATCTTCAG+AGG | 0.533219 | 8.4:+18157839 | None:intergenic |
ATAGGGGTGAATTTGAGGAG+AGG | 0.533373 | 8.4:-18158927 | MS.gene063483:CDS |
TTGGCCAAAATGAGAAAGAA+AGG | 0.533425 | 8.4:-18157547 | MS.gene063483:CDS |
GGTTGCAAGGTTGCAAATGA+AGG | 0.533779 | 8.4:-18156741 | MS.gene063483:CDS |
AAGGAACCAGTTGGTTGTTG+AGG | 0.534620 | 8.4:+18157419 | None:intergenic |
GAGGTTGTTAGCCGATGGAC+TGG | 0.535262 | 8.4:-18157587 | MS.gene063483:CDS |
ATCATCATGACCTCTAACCT+TGG | 0.536499 | 8.4:-18156923 | MS.gene063483:CDS |
AGGAAATTGACAATCTTGAA+AGG | 0.539527 | 8.4:-18158330 | MS.gene063483:CDS |
AACCGCGGTTGTTGAAGGGT+TGG | 0.544086 | 8.4:-18159043 | MS.gene063483:CDS |
CTAACATCAGCAAGATTGCT+AGG | 0.545324 | 8.4:+18158994 | None:intergenic |
AGAATTGATGCAAGGTGTAA+GGG | 0.547836 | 8.4:+18159591 | None:intergenic |
GCCAGAATTGTTGAACCGAC+TGG | 0.548964 | 8.4:-18156810 | MS.gene063483:CDS |
CAGCAACAGCATTAACCGCC+TGG | 0.549246 | 8.4:+18157477 | None:intergenic |
ATCACATGAGCAATTGAGAA+AGG | 0.549247 | 8.4:-18156762 | MS.gene063483:CDS |
AACCCTAGAAACAGCAACAC+CGG | 0.556906 | 8.4:+18159293 | None:intergenic |
AACTGAGGTTGAAAAGCTGA+GGG | 0.557131 | 8.4:-18159268 | MS.gene063483:CDS |
GGTATGTTGGACATGAAGAA+GGG | 0.557789 | 8.4:-18157108 | MS.gene063483:CDS |
CTTGGGGCTGGTAGAACAGA+AGG | 0.557876 | 8.4:-18158829 | MS.gene063483:CDS |
TCCAAGTCTTGGATGATGGG+AGG | 0.558720 | 8.4:-18156991 | MS.gene063483:CDS |
GAGAGATATGAGGGTCATCA+TGG | 0.559334 | 8.4:-18158616 | MS.gene063483:CDS |
GGATTGTTAATGCTGAAACT+GGG | 0.559679 | 8.4:-18156354 | MS.gene063483:CDS |
TAGAGTTGTGGGACAAGACC+AGG | 0.560454 | 8.4:-18157495 | MS.gene063483:CDS |
GAAGACTTATGGAAGAGACT+TGG | 0.562344 | 8.4:-18159190 | MS.gene063483:CDS |
TGTCAAGAAAATGAGAATTG+AGG | 0.563545 | 8.4:-18156272 | MS.gene063483:CDS |
CTTCAATTGCACCATATCGC+AGG | 0.563940 | 8.4:+18157708 | None:intergenic |
AAGAAGTTGAAGAAGCTGAA+GGG | 0.564464 | 8.4:-18158888 | MS.gene063483:CDS |
TGCTGAGAGAGGAATTGCAT+TGG | 0.564643 | 8.4:-18156702 | MS.gene063483:CDS |
CATACTTACATCTACAAGAC+GGG | 0.566138 | 8.4:+18158243 | None:intergenic |
GTTGACTGAAACAGTTGGAC+CGG | 0.571247 | 8.4:-18157621 | MS.gene063483:CDS |
GGACTGGTATACCGGTGACT+AGG | 0.572247 | 8.4:-18157571 | MS.gene063483:CDS |
ATCTTGAAGGTAGCACTGAT+GGG | 0.576475 | 8.4:-18157664 | MS.gene063483:CDS |
GTTAATCTTGGGAATTCTCG+AGG | 0.577968 | 8.4:-18159346 | MS.gene063483:CDS |
GGTGCTGAGCATCTCTTGAG+TGG | 0.579664 | 8.4:-18156902 | MS.gene063483:CDS |
CCAGGCACTTCATCTGGTGG+AGG | 0.580312 | 8.4:+18159450 | None:intergenic |
CAGACTGCACACTAGAGTTG+TGG | 0.580593 | 8.4:-18157507 | MS.gene063483:CDS |
TAGCCGAGGTTGTTAGCCGA+TGG | 0.581783 | 8.4:-18157592 | MS.gene063483:CDS |
GGTATACCGGTGACTAGGCT+TGG | 0.582136 | 8.4:-18157566 | MS.gene063483:CDS |
CCTCCACCAGATGAAGTGCC+TGG | 0.583174 | 8.4:-18159450 | MS.gene063483:CDS |
TTGCAGCTCAATTGTCTAGT+CGG | 0.583231 | 8.4:-18158564 | MS.gene063483:CDS |
CTACCAGGCACTTCATCTGG+TGG | 0.583721 | 8.4:+18159447 | None:intergenic |
TTTAAACCAATGCTTGCTCG+TGG | 0.585207 | 8.4:-18158784 | MS.gene063483:CDS |
GAGTGATGCAGGAAGTAAGA+AGG | 0.587622 | 8.4:-18156841 | MS.gene063483:CDS |
TAACAGAAGCTGTAAGGAGA+AGG | 0.589440 | 8.4:-18157078 | MS.gene063483:CDS |
AGCAATTGAGAAAGGTTGCA+AGG | 0.593285 | 8.4:-18156754 | MS.gene063483:CDS |
AGAGGATTGATGAGATTCGA+AGG | 0.595177 | 8.4:-18157808 | MS.gene063483:CDS |
TTGTTGAAGGGTTGGCTCAG+AGG | 0.595730 | 8.4:-18159035 | MS.gene063483:CDS |
TCGATCGCGAGCAGCTTGCA+TGG | 0.599673 | 8.4:+18156862 | None:intergenic |
TGGTAAAACTGAGCTTGCAA+AGG | 0.600639 | 8.4:-18157372 | MS.gene063483:CDS |
ATTCTAGTTTCTGATCCTAA+CGG | 0.601379 | 8.4:-18159573 | MS.gene063483:CDS |
AAACTGAGGTTGAAAAGCTG+AGG | 0.602048 | 8.4:-18159269 | MS.gene063483:CDS |
TATTGGTGCTACAACGCTTG+AGG | 0.605062 | 8.4:-18158749 | MS.gene063483:CDS |
AGTTGGACCAAGGAATAAGA+AGG | 0.606835 | 8.4:+18157400 | None:intergenic |
TTAATGTTGACTGAAACAGT+TGG | 0.611185 | 8.4:-18157626 | MS.gene063483:CDS |
GGCGGTTAATGCTGTTGCTG+AGG | 0.611492 | 8.4:-18157474 | MS.gene063483:CDS |
TGTTTCTAGGGTTAAAACTG+AGG | 0.616506 | 8.4:-18159283 | MS.gene063483:CDS |
TACCGTGTAGAAAAGAATGG+AGG | 0.617392 | 8.4:-18156376 | MS.gene063483:CDS |
GGATTAAAAGAGAGATATGA+GGG | 0.617828 | 8.4:-18158625 | MS.gene063483:CDS |
CAATTCCTCTCTCAGCAAGA+CGG | 0.617980 | 8.4:+18156708 | None:intergenic |
GCTAGCCGTCTTGCTGAGAG+AGG | 0.619045 | 8.4:-18156713 | MS.gene063483:CDS |
CCATACTTACATCTACAAGA+CGG | 0.619404 | 8.4:+18158242 | None:intergenic |
TACCAACACCAGTTGGACCA+AGG | 0.623035 | 8.4:+18157390 | None:intergenic |
TCATGCTCTAGAGAAAGAGA+AGG | 0.626681 | 8.4:-18158281 | MS.gene063483:CDS |
GAGACTTGGTTGAACAAGCA+GGG | 0.628162 | 8.4:-18159176 | MS.gene063483:CDS |
ATTTGATGATGAAAATCAGT+TGG | 0.628949 | 8.4:-18157333 | MS.gene063483:CDS |
ACCGTGTAGAAAAGAATGGA+GGG | 0.629952 | 8.4:-18156375 | MS.gene063483:CDS |
AGGAATAAGAAGGAACCAGT+TGG | 0.632548 | 8.4:+18157410 | None:intergenic |
GGGAGGTTGACTGACGGACA+AGG | 0.633232 | 8.4:-18156974 | MS.gene063483:CDS |
GCTGTATTGAGATCAAGAGC+TGG | 0.635226 | 8.4:-18157452 | MS.gene063483:CDS |
TCTGGTGGAGGTGATTGAGA+TGG | 0.640106 | 8.4:+18159462 | None:intergenic |
AAGAGATTCGAAGAGTTGTG+AGG | 0.646944 | 8.4:-18159125 | MS.gene063483:CDS |
GTTGGTGAGAATTGACATGT+CGG | 0.648441 | 8.4:-18157315 | MS.gene063483:CDS |
ATGGTGCTAGACCAATTAGA+AGG | 0.648738 | 8.4:-18156510 | MS.gene063483:CDS |
AGGGCGTCATCTACCTGACA+AGG | 0.649063 | 8.4:-18158413 | MS.gene063483:CDS |
AGCCAACCCTTCAACAACCG+CGG | 0.649201 | 8.4:+18159041 | None:intergenic |
CAGAAACTAGAATTGATGCA+AGG | 0.649347 | 8.4:+18159583 | None:intergenic |
TGGTAGAACAGAAGGATCGA+TGG | 0.650995 | 8.4:-18158821 | MS.gene063483:CDS |
GTATGTTGGACATGAAGAAG+GGG | 0.651475 | 8.4:-18157107 | MS.gene063483:CDS |
TGCATTGGCAGTAACAGATG+CGG | 0.653933 | 8.4:-18156687 | MS.gene063483:CDS |
ATATGGTGCAATTGAAGAGG+TGG | 0.654225 | 8.4:-18157702 | MS.gene063483:CDS |
TCACCGGTATACCAGTCCAT+CGG | 0.655399 | 8.4:+18157576 | None:intergenic |
AGAAATTGATGAAAATACAA+CGG | 0.657908 | 8.4:-18156437 | MS.gene063483:CDS |
AAGGTTGCAAATGAAGGATG+TGG | 0.660475 | 8.4:-18156735 | MS.gene063483:CDS |
ACGAATCGCTTTGATAAGCG+CGG | 0.664960 | 8.4:+18159422 | None:intergenic |
ATACAACAACTTCGTCCAGT+CGG | 0.665392 | 8.4:+18156795 | None:intergenic |
GTTGCTGGTGCGAAGTATAG+GGG | 0.666198 | 8.4:-18158943 | MS.gene063483:CDS |
TCAAGAGATGCTCAGCACCA+AGG | 0.666994 | 8.4:+18156906 | None:intergenic |
AGTCCATCGGCTAACAACCT+CGG | 0.668166 | 8.4:+18157589 | None:intergenic |
CACTACAGGAGGCAGAGAGG+CGG | 0.668262 | 8.4:-18157754 | MS.gene063483:CDS |
GTGCTAGACCAATTAGAAGG+TGG | 0.668833 | 8.4:-18156507 | MS.gene063483:CDS |
GCTCATCTTTGCACTACAGG+AGG | 0.670257 | 8.4:-18157765 | MS.gene063483:CDS |
GATTGTTAATGCTGAAACTG+GGG | 0.676690 | 8.4:-18156353 | MS.gene063483:CDS |
TGACGGACAAGGCAGAACTG+TGG | 0.678310 | 8.4:-18156963 | MS.gene063483:CDS |
GTATGATCTAGCCAGAGCTG+CGG | 0.683383 | 8.4:-18157732 | MS.gene063483:CDS |
TCAACTTGATAGTCAGCCTG+AGG | 0.685328 | 8.4:-18158350 | MS.gene063483:CDS |
GATTGATTGGTGCACCACCA+GGG | 0.685797 | 8.4:-18157265 | MS.gene063483:intron |
GCGATATGGTGCAATTGAAG+AGG | 0.687694 | 8.4:-18157705 | MS.gene063483:CDS |
CAAGCTGCACAGAAATCACG+TGG | 0.691575 | 8.4:-18159393 | MS.gene063483:CDS |
AATCTAATAACTTACCCTGG+TGG | 0.704597 | 8.4:+18157251 | None:intergenic |
TGGACCGGACCAAATAGCCG+AGG | 0.708477 | 8.4:-18157606 | MS.gene063483:CDS |
TATGTTGGACATGAAGAAGG+GGG | 0.714139 | 8.4:-18157106 | MS.gene063483:CDS |
TTGCACTACAGGAGGCAGAG+AGG | 0.722486 | 8.4:-18157757 | MS.gene063483:CDS |
GATGATGGGAGGTTGACTGA+CGG | 0.725487 | 8.4:-18156980 | MS.gene063483:CDS |
ACTGAGGTTGAAAAGCTGAG+GGG | 0.737026 | 8.4:-18159267 | MS.gene063483:CDS |
AGTTGTGGGACAAGACCAGG+CGG | 0.784379 | 8.4:-18157492 | MS.gene063483:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GAATAAAATTTGACTAAATA+TGG | + | chr8.4:18157821-18157840 | None:intergenic | 15.0% |
!! | TATAATATAATAACACTTAC+TGG | + | chr8.4:18159295-18159314 | None:intergenic | 15.0% |
!!! | TATTAGTCTAAATAATATTC+AGG | + | chr8.4:18158703-18158722 | None:intergenic | 15.0% |
!! | AGAAATTGATGAAAATACAA+CGG | - | chr8.4:18159487-18159506 | MS.gene063483:CDS | 20.0% |
!! | ATAGAATATTTCAGACAAAA+TGG | - | chr8.4:18159337-18159356 | MS.gene063483:CDS | 20.0% |
!! | ATAGTATCATCTTATTCTTT+AGG | - | chr8.4:18159312-18159331 | MS.gene063483:CDS | 20.0% |
!! | TTAATAAACATTCTAGTATG+TGG | - | chr8.4:18158754-18158773 | MS.gene063483:CDS | 20.0% |
! | ACTGCAATTAAAAATCTTGA+AGG | - | chr8.4:18158247-18158266 | MS.gene063483:intron | 25.0% |
! | AGAGAATATAAAGAACATAC+CGG | + | chr8.4:18157393-18157412 | None:intergenic | 25.0% |
! | CATCAAAATTAATGCTATCA+TGG | + | chr8.4:18157753-18157772 | None:intergenic | 25.0% |
! | CTAAGTACATAACTATATTG+TGG | - | chr8.4:18157918-18157937 | MS.gene063483:intron | 25.0% |
!! | TCATTTTGCATTGAATTTTC+AGG | - | chr8.4:18158795-18158814 | MS.gene063483:CDS | 25.0% |
!!! | ATTTGATGATGAAAATCAGT+TGG | - | chr8.4:18158591-18158610 | MS.gene063483:CDS | 25.0% |
AAGAACAATCCTGTTCTTAT+TGG | - | chr8.4:18156840-18156859 | MS.gene063483:CDS | 30.0% | |
AGGAAATTGACAATCTTGAA+AGG | - | chr8.4:18157594-18157613 | MS.gene063483:CDS | 30.0% | |
AGTACATAACTATATTGTGG+TGG | - | chr8.4:18157921-18157940 | MS.gene063483:intron | 30.0% | |
AGTATAGTAAAGAGAAAGAG+AGG | - | chr8.4:18158098-18158117 | MS.gene063483:intron | 30.0% | |
ATGAGATTCATCTTGTTCTT+GGG | - | chr8.4:18157078-18157097 | MS.gene063483:CDS | 30.0% | |
ATGTGTTCTGTATGTGTTAA+GGG | - | chr8.4:18157492-18157511 | MS.gene063483:CDS | 30.0% | |
ATTCTGATTCAGATTCCAAA+TGG | - | chr8.4:18159605-18159624 | MS.gene063483:CDS | 30.0% | |
ATTTGAAAGAAGGTTTCAAC+AGG | - | chr8.4:18157229-18157248 | MS.gene063483:intron | 30.0% | |
GGATTAAAAGAGAGATATGA+GGG | - | chr8.4:18157299-18157318 | MS.gene063483:CDS | 30.0% | |
TAGTGGCTAATAATACTAAC+TGG | - | chr8.4:18159360-18159379 | MS.gene063483:CDS | 30.0% | |
TATGTGTTCTGTATGTGTTA+AGG | - | chr8.4:18157491-18157510 | MS.gene063483:CDS | 30.0% | |
TATTTCAGACAAAATGGTAG+TGG | - | chr8.4:18159343-18159362 | MS.gene063483:CDS | 30.0% | |
TCATATTTAACTCTAGCTAC+TGG | + | chr8.4:18158733-18158752 | None:intergenic | 30.0% | |
TGATGTTAGGTTAATTGCTT+TGG | - | chr8.4:18156944-18156963 | MS.gene063483:CDS | 30.0% | |
TGGATTAAAAGAGAGATATG+AGG | - | chr8.4:18157298-18157317 | MS.gene063483:CDS | 30.0% | |
TGTCAAGAAAATGAGAATTG+AGG | - | chr8.4:18159652-18159671 | MS.gene063483:CDS | 30.0% | |
TTACTATACTTCATCTTCAG+AGG | + | chr8.4:18158088-18158107 | None:intergenic | 30.0% | |
! | AGGTTAATTGCTTTGGATAT+GGG | - | chr8.4:18156951-18156970 | MS.gene063483:CDS | 30.0% |
! | GTTTTGTGAGTAAATTTCTC+TGG | + | chr8.4:18156252-18156271 | None:intergenic | 30.0% |
! | TAGGTTAATTGCTTTGGATA+TGG | - | chr8.4:18156950-18156969 | MS.gene063483:CDS | 30.0% |
! | TCAAAAAGTACAACACTGTA+TGG | + | chr8.4:18158872-18158891 | None:intergenic | 30.0% |
! | TTAATGTTGACTGAAACAGT+TGG | - | chr8.4:18158298-18158317 | MS.gene063483:CDS | 30.0% |
!! | ATTCTAGTTTCTGATCCTAA+CGG | - | chr8.4:18156351-18156370 | MS.gene063483:CDS | 30.0% |
!! | GTTATTGTTGTTTCTTGTGT+AGG | - | chr8.4:18159388-18159407 | MS.gene063483:CDS | 30.0% |
!! | TTTCAAGCATTGAAGACTTA+TGG | - | chr8.4:18156723-18156742 | MS.gene063483:CDS | 30.0% |
!!! | CATTGAATTTTCAGGTATGT+TGG | - | chr8.4:18158803-18158822 | MS.gene063483:CDS | 30.0% |
AAAGAAGTTGAAGAAGCTGA+AGG | - | chr8.4:18157035-18157054 | MS.gene063483:CDS | 35.0% | |
AAGAAGTTGAAGAAGCTGAA+GGG | - | chr8.4:18157036-18157055 | MS.gene063483:CDS | 35.0% | |
AAGATGCAGCATTTGAAAGA+AGG | - | chr8.4:18157219-18157238 | MS.gene063483:intron | 35.0% | |
AAGGTTTCAACAGGTTTATG+TGG | - | chr8.4:18157238-18157257 | MS.gene063483:intron | 35.0% | |
AATCTAATAACTTACCCTGG+TGG | + | chr8.4:18158676-18158695 | None:intergenic | 35.0% | |
ACGAATCTAATAACTTACCC+TGG | + | chr8.4:18158679-18158698 | None:intergenic | 35.0% | |
AGAATTGATGCAAGGTGTAA+GGG | + | chr8.4:18156336-18156355 | None:intergenic | 35.0% | |
AGCTGTTGATCAGTTAATCT+TGG | - | chr8.4:18156566-18156585 | MS.gene063483:intron | 35.0% | |
ATCACATGAGCAATTGAGAA+AGG | - | chr8.4:18159162-18159181 | MS.gene063483:CDS | 35.0% | |
CACTCTGTATCAAGATTGAT+TGG | - | chr8.4:18158646-18158665 | MS.gene063483:CDS | 35.0% | |
CACTTGTGTTTATGCTAACA+TGG | - | chr8.4:18157468-18157487 | MS.gene063483:CDS | 35.0% | |
CAGAAACTAGAATTGATGCA+AGG | + | chr8.4:18156344-18156363 | None:intergenic | 35.0% | |
CATACTTACATCTACAAGAC+GGG | + | chr8.4:18157684-18157703 | None:intergenic | 35.0% | |
CCAAAATGAGAAAGAAAGGT+TGG | - | chr8.4:18158381-18158400 | MS.gene063483:CDS | 35.0% | |
CCATACTTACATCTACAAGA+CGG | + | chr8.4:18157685-18157704 | None:intergenic | 35.0% | |
CGAAGAATGCTAATTGTATC+CGG | + | chr8.4:18157278-18157297 | None:intergenic | 35.0% | |
GATACAATTAGCATTCTTCG+TGG | - | chr8.4:18157278-18157297 | MS.gene063483:CDS | 35.0% | |
GATGAGATTCATCTTGTTCT+TGG | - | chr8.4:18157077-18157096 | MS.gene063483:CDS | 35.0% | |
GATTGTTAATGCTGAAACTG+GGG | - | chr8.4:18159571-18159590 | MS.gene063483:CDS | 35.0% | |
GCTGTTGATCAGTTAATCTT+GGG | - | chr8.4:18156567-18156586 | MS.gene063483:intron | 35.0% | |
GGATTGTTAATGCTGAAACT+GGG | - | chr8.4:18159570-18159589 | MS.gene063483:CDS | 35.0% | |
GTCAATTAACAGAAGCTGTA+AGG | - | chr8.4:18158840-18158859 | MS.gene063483:CDS | 35.0% | |
TAGAATTGATGCAAGGTGTA+AGG | + | chr8.4:18156337-18156356 | None:intergenic | 35.0% | |
TATGCTAAATCACTTCCCTT+AGG | + | chr8.4:18159530-18159549 | None:intergenic | 35.0% | |
TCAAGATTGTCAATTTCCTC+AGG | + | chr8.4:18157593-18157612 | None:intergenic | 35.0% | |
TGAGATTCATCTTGTTCTTG+GGG | - | chr8.4:18157079-18157098 | MS.gene063483:CDS | 35.0% | |
TTGGCCAAAATGAGAAAGAA+AGG | - | chr8.4:18158377-18158396 | MS.gene063483:CDS | 35.0% | |
! | AATGAGAAAGAAAGGTTGGT+TGG | - | chr8.4:18158385-18158404 | MS.gene063483:CDS | 35.0% |
! | CCAACCTTTCTTTCTCATTT+TGG | + | chr8.4:18158384-18158403 | None:intergenic | 35.0% |
! | TGATAGTTGATGTTATTCGC+AGG | - | chr8.4:18158024-18158043 | MS.gene063483:intron | 35.0% |
! | TTGTGAGGATTTTGTCAAGA+AGG | - | chr8.4:18156814-18156833 | MS.gene063483:CDS | 35.0% |
! | TTGTTTCTTGTGTAGGTGTA+TGG | - | chr8.4:18159395-18159414 | MS.gene063483:CDS | 35.0% |
!! | AAAAAGGTTGAAAGTGCTTC+TGG | - | chr8.4:18156690-18156709 | MS.gene063483:CDS | 35.0% |
!! | GGAAGTTGATGATGATGAAA+TGG | - | chr8.4:18159673-18159692 | MS.gene063483:CDS | 35.0% |
!! | GGTGATTTGTTTAAAGAAGC+CGG | - | chr8.4:18156612-18156631 | MS.gene063483:intron | 35.0% |
!! | TGTTTCTAGGGTTAAAACTG+AGG | - | chr8.4:18156641-18156660 | MS.gene063483:intron | 35.0% |
!! | TTAACTCTAGCTACTGGTTT+AGG | + | chr8.4:18158727-18158746 | None:intergenic | 35.0% |
AAAAGCTGAGGGGTAAAGAT+GGG | - | chr8.4:18156667-18156686 | MS.gene063483:CDS | 40.0% | |
AAACTGAGGTTGAAAAGCTG+AGG | - | chr8.4:18156655-18156674 | MS.gene063483:CDS | 40.0% | |
AACTGAGGTTGAAAAGCTGA+GGG | - | chr8.4:18156656-18156675 | MS.gene063483:CDS | 40.0% | |
AAGAGATTCGAAGAGTTGTG+AGG | - | chr8.4:18156799-18156818 | MS.gene063483:CDS | 40.0% | |
AAGGTTGCAAATGAAGGATG+TGG | - | chr8.4:18159189-18159208 | MS.gene063483:CDS | 40.0% | |
AATTGACATGTCGGAGTACA+TGG | - | chr8.4:18158618-18158637 | MS.gene063483:CDS | 40.0% | |
ACAACGGTTTACATTGATGC+TGG | - | chr8.4:18159503-18159522 | MS.gene063483:CDS | 40.0% | |
ACCGTGTAGAAAAGAATGGA+GGG | - | chr8.4:18159549-18159568 | MS.gene063483:CDS | 40.0% | |
ACTAAATCAATCGCCTTGTC+AGG | + | chr8.4:18157527-18157546 | None:intergenic | 40.0% | |
AGAGGATTGATGAGATTCGA+AGG | - | chr8.4:18158116-18158135 | MS.gene063483:intron | 40.0% | |
AGCAATTGAGAAAGGTTGCA+AGG | - | chr8.4:18159170-18159189 | MS.gene063483:CDS | 40.0% | |
AGGAATAAGAAGGAACCAGT+TGG | + | chr8.4:18158517-18158536 | None:intergenic | 40.0% | |
AGGTATGTTGGACATGAAGA+AGG | - | chr8.4:18158815-18158834 | MS.gene063483:CDS | 40.0% | |
AGTTGGACCAAGGAATAAGA+AGG | + | chr8.4:18158527-18158546 | None:intergenic | 40.0% | |
ATACAACAACTTCGTCCAGT+CGG | + | chr8.4:18159132-18159151 | None:intergenic | 40.0% | |
ATATGGTGCAATTGAAGAGG+TGG | - | chr8.4:18158222-18158241 | MS.gene063483:intron | 40.0% | |
ATCATCATGACCTCTAACCT+TGG | - | chr8.4:18159001-18159020 | MS.gene063483:CDS | 40.0% | |
ATTCTCGAGGATTCTCAGAT+TGG | - | chr8.4:18156591-18156610 | MS.gene063483:intron | 40.0% | |
CAAGCAATTTCAAACGTTGC+TGG | - | chr8.4:18156384-18156403 | MS.gene063483:CDS | 40.0% | |
CCGTCTTGTAGATGTAAGTA+TGG | - | chr8.4:18157682-18157701 | MS.gene063483:CDS | 40.0% | |
CTAACATCAGCAAGATTGCT+AGG | + | chr8.4:18156933-18156952 | None:intergenic | 40.0% | |
CTAATTGTATCCGGAACACT+AGG | + | chr8.4:18157269-18157288 | None:intergenic | 40.0% | |
CTAGCAATCTTGCTGATGTT+AGG | - | chr8.4:18156931-18156950 | MS.gene063483:CDS | 40.0% | |
CTCAATTGCTCATGTGATAG+AGG | + | chr8.4:18159160-18159179 | None:intergenic | 40.0% | |
GAAGACTTATGGAAGAGACT+TGG | - | chr8.4:18156734-18156753 | MS.gene063483:CDS | 40.0% | |
GAAGTATAGGGGTGAATTTG+AGG | - | chr8.4:18156992-18157011 | MS.gene063483:CDS | 40.0% | |
GCATACCGTGTAGAAAAGAA+TGG | - | chr8.4:18159545-18159564 | MS.gene063483:CDS | 40.0% | |
GCTTGGAAGAAAATACCGTT+AGG | + | chr8.4:18156369-18156388 | None:intergenic | 40.0% | |
GGGATTGTTAATGCTGAAAC+TGG | - | chr8.4:18159569-18159588 | MS.gene063483:CDS | 40.0% | |
GGTATGTTGGACATGAAGAA+GGG | - | chr8.4:18158816-18158835 | MS.gene063483:CDS | 40.0% | |
GTATGTTGGACATGAAGAAG+GGG | - | chr8.4:18158817-18158836 | MS.gene063483:CDS | 40.0% | |
GTTAATCTTGGGAATTCTCG+AGG | - | chr8.4:18156578-18156597 | MS.gene063483:intron | 40.0% | |
GTTGATGTTATTCGCAGGTA+CGG | - | chr8.4:18158029-18158048 | MS.gene063483:intron | 40.0% | |
TAACAGAAGCTGTAAGGAGA+AGG | - | chr8.4:18158846-18158865 | MS.gene063483:CDS | 40.0% | |
TACATTGATGCTGGTCCTAA+GGG | - | chr8.4:18159512-18159531 | MS.gene063483:CDS | 40.0% | |
TACCGTGTAGAAAAGAATGG+AGG | - | chr8.4:18159548-18159567 | MS.gene063483:CDS | 40.0% | |
TATGTTGGACATGAAGAAGG+GGG | - | chr8.4:18158818-18158837 | MS.gene063483:CDS | 40.0% | |
TGAATTTGAGGAGAGGTTGA+AGG | - | chr8.4:18157004-18157023 | MS.gene063483:CDS | 40.0% | |
TGGTAAAACTGAGCTTGCAA+AGG | - | chr8.4:18158552-18158571 | MS.gene063483:intron | 40.0% | |
TTACATTGATGCTGGTCCTA+AGG | - | chr8.4:18159511-18159530 | MS.gene063483:CDS | 40.0% | |
TTCTCCAAGTCTTGGATGAT+GGG | - | chr8.4:18158930-18158949 | MS.gene063483:CDS | 40.0% | |
TTCTTATTCCTTGGTCCAAC+TGG | - | chr8.4:18158526-18158545 | MS.gene063483:intron | 40.0% | |
TTGCAGCTCAATTGTCTAGT+CGG | - | chr8.4:18157360-18157379 | MS.gene063483:CDS | 40.0% | |
TTGTCTAGTCGGTACATAAC+CGG | - | chr8.4:18157371-18157390 | MS.gene063483:CDS | 40.0% | |
TTTAAACCAATGCTTGCTCG+TGG | - | chr8.4:18157140-18157159 | MS.gene063483:intron | 40.0% | |
! | AAAACAAACGAAGCACTTGC+TGG | - | chr8.4:18156267-18156286 | MS.gene063483:CDS | 40.0% |
! | AAAGAAAGGTTGGTTGGACT+TGG | - | chr8.4:18158391-18158410 | MS.gene063483:CDS | 40.0% |
! | AATCTTGAAGGTAGCACTGA+TGG | - | chr8.4:18158259-18158278 | MS.gene063483:CDS | 40.0% |
! | ACTGGTTCCTTCTTATTCCT+TGG | - | chr8.4:18158517-18158536 | MS.gene063483:intron | 40.0% |
! | ATGGTGCTAGACCAATTAGA+AGG | - | chr8.4:18159414-18159433 | MS.gene063483:CDS | 40.0% |
! | CAGCAACGTTTGAAATTGCT+TGG | + | chr8.4:18156386-18156405 | None:intergenic | 40.0% |
! | GGCGATTGATTTAGTTGATG+AGG | - | chr8.4:18157532-18157551 | MS.gene063483:CDS | 40.0% |
! | GTTGGTGAGAATTGACATGT+CGG | - | chr8.4:18158609-18158628 | MS.gene063483:CDS | 40.0% |
! | TCAGTTTTACCAACACCAGT+TGG | + | chr8.4:18158544-18158563 | None:intergenic | 40.0% |
! | TCCCTCCATTCTTTTCTACA+CGG | + | chr8.4:18159553-18159572 | None:intergenic | 40.0% |
! | TTGAGATCAAGAGCTGGTTT+AGG | - | chr8.4:18158478-18158497 | MS.gene063483:intron | 40.0% |
!! | AGGAAGTAAGAAGGCATTTC+AGG | - | chr8.4:18159092-18159111 | MS.gene063483:CDS | 40.0% |
!! | ATCTTGAAGGTAGCACTGAT+GGG | - | chr8.4:18158260-18158279 | MS.gene063483:CDS | 40.0% |
!! | TCATGCTCTAGAGAAAGAGA+AGG | - | chr8.4:18157643-18157662 | MS.gene063483:CDS | 40.0% |
AACCCTAGAAACAGCAACAC+CGG | + | chr8.4:18156634-18156653 | None:intergenic | 45.0% | |
AAGGAACCAGTTGGTTGTTG+AGG | + | chr8.4:18158508-18158527 | None:intergenic | 45.0% | |
AAGGCAGAACTGTGGACTTT+AGG | - | chr8.4:18158969-18158988 | MS.gene063483:CDS | 45.0% | |
ACCGAAAAGTGATGCTGTTC+AGG | - | chr8.4:18159628-18159647 | MS.gene063483:CDS | 45.0% | |
ACGAATCGCTTTGATAAGCG+CGG | + | chr8.4:18156505-18156524 | None:intergenic | 45.0% | |
ACTGAGGTTGAAAAGCTGAG+GGG | - | chr8.4:18156657-18156676 | MS.gene063483:CDS | 45.0% | |
AGACTGCACACTAGAGTTGT+GGG | - | chr8.4:18158418-18158437 | MS.gene063483:intron | 45.0% | |
AGAGCTCATCTTTGCACTAC+AGG | - | chr8.4:18158156-18158175 | MS.gene063483:intron | 45.0% | |
AGTTGAAGAAGCTGAAGGGA+AGG | - | chr8.4:18157040-18157059 | MS.gene063483:CDS | 45.0% | |
ATAGGGGTGAATTTGAGGAG+AGG | - | chr8.4:18156997-18157016 | MS.gene063483:CDS | 45.0% | |
ATTCATCTTGTTCTTGGGGC+TGG | - | chr8.4:18157083-18157102 | MS.gene063483:CDS | 45.0% | |
CAACACTCTTCTCCAAGTCT+TGG | - | chr8.4:18158922-18158941 | MS.gene063483:CDS | 45.0% | |
CAATTAGAAGGTGGCTAGAG+AGG | - | chr8.4:18159426-18159445 | MS.gene063483:CDS | 45.0% | |
CAATTCCTCTCTCAGCAAGA+CGG | + | chr8.4:18159219-18159238 | None:intergenic | 45.0% | |
CTCTCTAGCCACCTTCTAAT+TGG | + | chr8.4:18159428-18159447 | None:intergenic | 45.0% | |
CTTCAATTGCACCATATCGC+AGG | + | chr8.4:18158219-18158238 | None:intergenic | 45.0% | |
CTTCTCCAAGTCTTGGATGA+TGG | - | chr8.4:18158929-18158948 | MS.gene063483:CDS | 45.0% | |
GAAAAACCGCGGTTGTTGAA+GGG | - | chr8.4:18156877-18156896 | MS.gene063483:CDS | 45.0% | |
GAAAAGCTGAGGGGTAAAGA+TGG | - | chr8.4:18156666-18156685 | MS.gene063483:CDS | 45.0% | |
GAGAGATATGAGGGTCATCA+TGG | - | chr8.4:18157308-18157327 | MS.gene063483:CDS | 45.0% | |
GAGGGGTAAAGATGGGAAAA+AGG | - | chr8.4:18156674-18156693 | MS.gene063483:CDS | 45.0% | |
GAGTGATGCAGGAAGTAAGA+AGG | - | chr8.4:18159083-18159102 | MS.gene063483:CDS | 45.0% | |
GCGATATGGTGCAATTGAAG+AGG | - | chr8.4:18158219-18158238 | MS.gene063483:intron | 45.0% | |
GCTGTATTGAGATCAAGAGC+TGG | - | chr8.4:18158472-18158491 | MS.gene063483:intron | 45.0% | |
GGGAAGCTTGATCCTGTTAT+TGG | - | chr8.4:18156768-18156787 | MS.gene063483:CDS | 45.0% | |
GGTTGCAAGGTTGCAAATGA+AGG | - | chr8.4:18159183-18159202 | MS.gene063483:CDS | 45.0% | |
GTGCTAGACCAATTAGAAGG+TGG | - | chr8.4:18159417-18159436 | MS.gene063483:CDS | 45.0% | |
GTGCTGCAAATGTGGGATAA+TGG | - | chr8.4:18157943-18157962 | MS.gene063483:intron | 45.0% | |
GTTGACTGAAACAGTTGGAC+CGG | - | chr8.4:18158303-18158322 | MS.gene063483:CDS | 45.0% | |
TGCTGAGAGAGGAATTGCAT+TGG | - | chr8.4:18159222-18159241 | MS.gene063483:CDS | 45.0% | |
TGGTAGAACAGAAGGATCGA+TGG | - | chr8.4:18157103-18157122 | MS.gene063483:CDS | 45.0% | |
TTGGCTCAGAGGATTGTTAG+AGG | - | chr8.4:18156900-18156919 | MS.gene063483:CDS | 45.0% | |
! | AGAGACTTGGTTGAACAAGC+AGG | - | chr8.4:18156747-18156766 | MS.gene063483:CDS | 45.0% |
! | CATCTCTTGAGTGGACTTTC+AGG | - | chr8.4:18159031-18159050 | MS.gene063483:CDS | 45.0% |
! | CTACAACGCTTGAGGAGTAT+AGG | - | chr8.4:18157183-18157202 | MS.gene063483:intron | 45.0% |
! | GAGACTTGGTTGAACAAGCA+GGG | - | chr8.4:18156748-18156767 | MS.gene063483:CDS | 45.0% |
! | TCAACTTGATAGTCAGCCTG+AGG | - | chr8.4:18157574-18157593 | MS.gene063483:CDS | 45.0% |
! | TCCAGTCGGTTCAACAATTC+TGG | + | chr8.4:18159118-18159137 | None:intergenic | 45.0% |
! | TGCATTGGCAGTAACAGATG+CGG | - | chr8.4:18159237-18159256 | MS.gene063483:CDS | 45.0% |
!! | GCATCACTTTTCGGTCCATT+TGG | + | chr8.4:18159623-18159642 | None:intergenic | 45.0% |
!! | GCCTGAACAGCATCACTTTT+CGG | + | chr8.4:18159632-18159651 | None:intergenic | 45.0% |
!! | TATTGGTGCTACAACGCTTG+AGG | - | chr8.4:18157175-18157194 | MS.gene063483:intron | 45.0% |
ACAACCTCGGCTATTTGGTC+CGG | + | chr8.4:18158325-18158344 | None:intergenic | 50.0% | |
ACCTCCCATCATCCAAGACT+TGG | + | chr8.4:18158937-18158956 | None:intergenic | 50.0% | |
AGATTGATTGGTGCACCACC+AGG | - | chr8.4:18158658-18158677 | MS.gene063483:CDS | 50.0% | |
AGGTTGTGACAGAGCTGTCT+AGG | - | chr8.4:18159450-18159469 | MS.gene063483:CDS | 50.0% | |
ATGCTCAGCACCAAGGTTAG+AGG | + | chr8.4:18159014-18159033 | None:intergenic | 50.0% | |
CAAGCTGCACAGAAATCACG+TGG | - | chr8.4:18156531-18156550 | MS.gene063483:intron | 50.0% | |
CACGAGCTAGCAATGACTTC+AGG | - | chr8.4:18156294-18156313 | MS.gene063483:CDS | 50.0% | |
CAGACTGCACACTAGAGTTG+TGG | - | chr8.4:18158417-18158436 | MS.gene063483:intron | 50.0% | |
CCAGGCTCACCAATAAGAAC+AGG | + | chr8.4:18156852-18156871 | None:intergenic | 50.0% | |
CCTGTTCTTATTGGTGAGCC+TGG | - | chr8.4:18156849-18156868 | MS.gene063483:CDS | 50.0% | |
CGTGGACAGCTTCGATGTAT+TGG | - | chr8.4:18157158-18157177 | MS.gene063483:intron | 50.0% | |
CTTATTGGTGAGCCTGGTGT+TGG | - | chr8.4:18156855-18156874 | MS.gene063483:CDS | 50.0% | |
GATTGATTGGTGCACCACCA+GGG | - | chr8.4:18158659-18158678 | MS.gene063483:CDS | 50.0% | |
GCCAGAATTGTTGAACCGAC+TGG | - | chr8.4:18159114-18159133 | MS.gene063483:CDS | 50.0% | |
GCTCATCTTTGCACTACAGG+AGG | - | chr8.4:18158159-18158178 | MS.gene063483:intron | 50.0% | |
GGAAAAACCGCGGTTGTTGA+AGG | - | chr8.4:18156876-18156895 | MS.gene063483:CDS | 50.0% | |
GGAAGACCTCAACAACCAAC+TGG | - | chr8.4:18158499-18158518 | MS.gene063483:intron | 50.0% | |
GGCTAACAACCTCGGCTATT+TGG | + | chr8.4:18158330-18158349 | None:intergenic | 50.0% | |
GGTTGCTGGTGCGAAGTATA+GGG | - | chr8.4:18156980-18156999 | MS.gene063483:CDS | 50.0% | |
GTATGATCTAGCCAGAGCTG+CGG | - | chr8.4:18158192-18158211 | MS.gene063483:intron | 50.0% | |
GTTGCTGGTGCGAAGTATAG+GGG | - | chr8.4:18156981-18157000 | MS.gene063483:CDS | 50.0% | |
TACCAACACCAGTTGGACCA+AGG | + | chr8.4:18158537-18158556 | None:intergenic | 50.0% | |
TAGAAGGTGGCTAGAGAGGA+AGG | - | chr8.4:18159430-18159449 | MS.gene063483:CDS | 50.0% | |
TAGAGTTGTGGGACAAGACC+AGG | - | chr8.4:18158429-18158448 | MS.gene063483:intron | 50.0% | |
TCAAGAGATGCTCAGCACCA+AGG | + | chr8.4:18159021-18159040 | None:intergenic | 50.0% | |
TCACCGGTATACCAGTCCAT+CGG | + | chr8.4:18158351-18158370 | None:intergenic | 50.0% | |
TCTGGTGGAGGTGATTGAGA+TGG | + | chr8.4:18156465-18156484 | None:intergenic | 50.0% | |
TCTTCGTCGCGTCCAATAAC+AGG | + | chr8.4:18156783-18156802 | None:intergenic | 50.0% | |
TGGTTGCTGGTGCGAAGTAT+AGG | - | chr8.4:18156979-18156998 | MS.gene063483:CDS | 50.0% | |
TGTGGCTGAACCTAGTGTTC+CGG | - | chr8.4:18157256-18157275 | MS.gene063483:intron | 50.0% | |
TTCCTTGGTCCAACTGGTGT+TGG | - | chr8.4:18158532-18158551 | MS.gene063483:intron | 50.0% | |
! | AGTCCATCGGCTAACAACCT+CGG | + | chr8.4:18158338-18158357 | None:intergenic | 50.0% |
! | TGCTTTGGATATGGGAGCAC+TGG | - | chr8.4:18156959-18156978 | MS.gene063483:CDS | 50.0% |
! | TTTTGGCCAAGCCTAGTCAC+CGG | + | chr8.4:18158367-18158386 | None:intergenic | 50.0% |
!! | AAGCCGGTGTTGCTGTTTCT+AGG | - | chr8.4:18156628-18156647 | MS.gene063483:intron | 50.0% |
!! | AGCCGGTGTTGCTGTTTCTA+GGG | - | chr8.4:18156629-18156648 | MS.gene063483:intron | 50.0% |
!! | GATGATGGGAGGTTGACTGA+CGG | - | chr8.4:18158944-18158963 | MS.gene063483:CDS | 50.0% |
!! | TAGCCGATGGACTGGTATAC+CGG | - | chr8.4:18158345-18158364 | MS.gene063483:CDS | 50.0% |
!! | TCCAAGTCTTGGATGATGGG+AGG | - | chr8.4:18158933-18158952 | MS.gene063483:CDS | 50.0% |
!! | TGTGGTGGTGCTGCAAATGT+GGG | - | chr8.4:18157936-18157955 | MS.gene063483:intron | 50.0% |
!! | TTGTGGTGGTGCTGCAAATG+TGG | - | chr8.4:18157935-18157954 | MS.gene063483:intron | 50.0% |
!! | TTGTTGAAGGGTTGGCTCAG+AGG | - | chr8.4:18156889-18156908 | MS.gene063483:CDS | 50.0% |
AACCGCGGTTGTTGAAGGGT+TGG | - | chr8.4:18156881-18156900 | MS.gene063483:CDS | 55.0% | |
AGCCAACCCTTCAACAACCG+CGG | + | chr8.4:18156886-18156905 | None:intergenic | 55.0% | |
AGCTGTCCACGAGCAAGCAT+TGG | + | chr8.4:18157149-18157168 | None:intergenic | 55.0% | |
AGTTGTGGGACAAGACCAGG+CGG | - | chr8.4:18158432-18158451 | MS.gene063483:intron | 55.0% | |
CAGCAACAGCATTAACCGCC+TGG | + | chr8.4:18158450-18158469 | None:intergenic | 55.0% | |
CTACCAGGCACTTCATCTGG+TGG | + | chr8.4:18156480-18156499 | None:intergenic | 55.0% | |
GAGGTTGTTAGCCGATGGAC+TGG | - | chr8.4:18158337-18158356 | MS.gene063483:CDS | 55.0% | |
GGCGGTTAATGCTGTTGCTG+AGG | - | chr8.4:18158450-18158469 | MS.gene063483:intron | 55.0% | |
GGTATACCGGTGACTAGGCT+TGG | - | chr8.4:18158358-18158377 | MS.gene063483:CDS | 55.0% | |
GTGCTACCAGGCACTTCATC+TGG | + | chr8.4:18156483-18156502 | None:intergenic | 55.0% | |
TAGCCGAGGTTGTTAGCCGA+TGG | - | chr8.4:18158332-18158351 | MS.gene063483:CDS | 55.0% | |
TTGCACTACAGGAGGCAGAG+AGG | - | chr8.4:18158167-18158186 | MS.gene063483:intron | 55.0% | |
! | ACCGCGGTTTTTCCAACACC+AGG | + | chr8.4:18156870-18156889 | None:intergenic | 55.0% |
! | AGGGCGTCATCTACCTGACA+AGG | - | chr8.4:18157511-18157530 | MS.gene063483:CDS | 55.0% |
! | CTTGGGGCTGGTAGAACAGA+AGG | - | chr8.4:18157095-18157114 | MS.gene063483:CDS | 55.0% |
! | GCCTGGTGTTGGAAAAACCG+CGG | - | chr8.4:18156866-18156885 | MS.gene063483:CDS | 55.0% |
! | GGACTGGTATACCGGTGACT+AGG | - | chr8.4:18158353-18158372 | MS.gene063483:CDS | 55.0% |
! | GGTGCTGAGCATCTCTTGAG+TGG | - | chr8.4:18159022-18159041 | MS.gene063483:CDS | 55.0% |
! | TGACGGACAAGGCAGAACTG+TGG | - | chr8.4:18158961-18158980 | MS.gene063483:CDS | 55.0% |
!! | GATATGGGAGCACTGGTTGC+TGG | - | chr8.4:18156966-18156985 | MS.gene063483:CDS | 55.0% |
!! | TTGATAAGCGCGGTGCTACC+AGG | + | chr8.4:18156495-18156514 | None:intergenic | 55.0% |
AGAGCTGCGGACCTGCGATA+TGG | - | chr8.4:18158205-18158224 | MS.gene063483:intron | 60.0% | |
ATATCGCAGGTCCGCAGCTC+TGG | + | chr8.4:18158206-18158225 | None:intergenic | 60.0% | |
CACTACAGGAGGCAGAGAGG+CGG | - | chr8.4:18158170-18158189 | MS.gene063483:intron | 60.0% | |
CCAGGCACTTCATCTGGTGG+AGG | + | chr8.4:18156477-18156496 | None:intergenic | 60.0% | |
GCTAGCCGTCTTGCTGAGAG+AGG | - | chr8.4:18159211-18159230 | MS.gene063483:CDS | 60.0% | |
TCGATCGCGAGCAGCTTGCA+TGG | + | chr8.4:18159065-18159084 | None:intergenic | 60.0% | |
TGCTCGCGATCGAGTGATGC+AGG | - | chr8.4:18159072-18159091 | MS.gene063483:CDS | 60.0% | |
TGGACCGGACCAAATAGCCG+AGG | - | chr8.4:18158318-18158337 | MS.gene063483:CDS | 60.0% | |
! | CCTCCACCAGATGAAGTGCC+TGG | - | chr8.4:18156474-18156493 | MS.gene063483:CDS | 60.0% |
! | GGGAGGTTGACTGACGGACA+AGG | - | chr8.4:18158950-18158969 | MS.gene063483:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 18156243 | 18159703 | 18156243 | ID=MS.gene063483 |
chr8.4 | mRNA | 18156243 | 18159703 | 18156243 | ID=MS.gene063483.t1;Parent=MS.gene063483 |
chr8.4 | exon | 18158554 | 18159703 | 18158554 | ID=MS.gene063483.t1.exon1;Parent=MS.gene063483.t1 |
chr8.4 | CDS | 18158554 | 18159703 | 18158554 | ID=cds.MS.gene063483.t1;Parent=MS.gene063483.t1 |
chr8.4 | exon | 18158252 | 18158433 | 18158252 | ID=MS.gene063483.t1.exon2;Parent=MS.gene063483.t1 |
chr8.4 | CDS | 18158252 | 18158433 | 18158252 | ID=cds.MS.gene063483.t1;Parent=MS.gene063483.t1 |
chr8.4 | exon | 18157266 | 18157900 | 18157266 | ID=MS.gene063483.t1.exon3;Parent=MS.gene063483.t1 |
chr8.4 | CDS | 18157266 | 18157900 | 18157266 | ID=cds.MS.gene063483.t1;Parent=MS.gene063483.t1 |
chr8.4 | exon | 18156652 | 18157129 | 18156652 | ID=MS.gene063483.t1.exon4;Parent=MS.gene063483.t1 |
chr8.4 | CDS | 18156652 | 18157129 | 18156652 | ID=cds.MS.gene063483.t1;Parent=MS.gene063483.t1 |
chr8.4 | exon | 18156243 | 18156536 | 18156243 | ID=MS.gene063483.t1.exon5;Parent=MS.gene063483.t1 |
chr8.4 | CDS | 18156243 | 18156536 | 18156243 | ID=cds.MS.gene063483.t1;Parent=MS.gene063483.t1 |
Gene Sequence |
Protein sequence |