AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene063483


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063483.t1 MTR_4g109450 99.452 912 5 0 1 912 1 912 0.0 1829
MS.gene063483.t1 MTR_4g109450 99.510 816 4 0 1 816 1 816 0.0 1638
MS.gene063483.t1 MTR_7g028970 87.281 912 110 2 1 912 1 906 0.0 1599
MS.gene063483.t1 MTR_7g012820 51.438 869 394 9 1 853 83 939 0.0 872
MS.gene063483.t1 MTR_7g012820 51.438 869 394 9 1 853 12 868 0.0 871
MS.gene063483.t1 MTR_6g013660 51.557 867 396 8 1 853 79 935 0.0 867
MS.gene063483.t1 MTR_3g106160 49.107 896 426 12 5 883 95 977 0.0 821
MS.gene063483.t1 MTR_2g099075 71.908 477 124 3 400 875 4 471 0.0 671
MS.gene063483.t1 MTR_8g100040 45.478 774 334 11 131 886 222 925 0.0 652
MS.gene063483.t1 MTR_3g102830 46.205 751 325 10 126 858 218 907 0.0 645
MS.gene063483.t1 MTR_3g498725 46.515 746 320 12 131 858 218 902 0.0 644
MS.gene063483.t1 MTR_3g098310 43.855 716 324 12 162 860 296 950 0.0 563
MS.gene063483.t1 MTR_2g006950 68.333 420 93 7 461 878 1 382 0.0 545
MS.gene063483.t1 MTR_2g006950 71.371 248 51 3 657 901 365 595 1.05e-106 342
MS.gene063483.t1 MTR_3g098310 45.389 553 235 10 162 707 296 788 7.93e-145 449
MS.gene063483.t1 MTR_3g461000 45.697 337 178 3 534 867 427 761 1.90e-101 335
MS.gene063483.t1 MTR_3g461000 35.109 413 253 7 4 404 3 412 6.58e-67 239
MS.gene063483.t1 MTR_7g096480 72.674 172 23 2 716 887 96 243 5.05e-76 248
MS.gene063483.t1 MTR_7g096480 53.906 128 26 1 530 657 1 95 5.34e-33 128
MS.gene063483.t1 MTR_6g048860 48.810 168 83 2 127 292 99 265 6.88e-45 166
MS.gene063483.t1 MTR_5g098360 77.895 95 20 1 558 652 74 167 5.63e-41 148
MS.gene063483.t1 MTR_1614s0010 41.709 199 109 3 638 835 1 193 2.49e-31 122
MS.gene063483.t1 MTR_1g076440 61.628 86 33 0 631 716 158 243 5.15e-30 121
MS.gene063483.t1 MTR_1g057150 28.239 301 182 11 20 292 26 320 9.33e-22 101
MS.gene063483.t1 MTR_1g090640 27.273 297 181 11 17 285 24 313 3.28e-17 87.4
MS.gene063483.t1 MTR_4g129230 31.364 220 108 8 26 208 32 245 2.03e-14 78.2
MS.gene063483.t1 MTR_2g038200 29.845 258 144 9 20 241 26 282 1.01e-13 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063483.t1 AT1G74310 86.585 902 114 4 1 901 1 896 0.0 1601
MS.gene063483.t1 AT1G74310 87.868 816 96 1 1 816 1 813 0.0 1477
MS.gene063483.t1 AT5G15450 50.579 864 408 8 1 853 77 932 0.0 858
MS.gene063483.t1 AT4G14670 66.970 660 176 5 1 658 1 620 0.0 850
MS.gene063483.t1 AT2G25140 49.542 874 415 8 1 859 83 945 0.0 838
MS.gene063483.t1 AT5G50920 46.577 745 320 12 131 858 221 904 0.0 644
MS.gene063483.t1 AT3G48870 45.845 746 325 9 131 858 210 894 0.0 632
MS.gene063483.t1 AT3G48870 45.845 746 325 9 131 858 241 925 0.0 632
MS.gene063483.t1 AT3G48870 45.845 746 325 9 131 858 241 925 0.0 632
MS.gene063483.t1 AT3G48870 45.845 746 325 9 131 858 241 925 0.0 632
MS.gene063483.t1 AT5G51070 38.624 901 436 19 4 851 81 917 0.0 559
MS.gene063483.t1 AT4G14675 49.324 148 43 1 720 867 1 116 5.15e-42 151
MS.gene063483.t1 AT3G45450 47.727 176 74 3 176 350 151 309 7.02e-41 154
MS.gene063483.t1 AT3G52490 31.399 293 163 12 20 293 26 299 9.39e-23 105
MS.gene063483.t1 AT5G57710 30.213 235 134 10 26 234 32 262 2.89e-15 81.3
MS.gene063483.t1 AT1G07200 26.875 160 108 3 570 728 68 219 3.28e-11 67.0

Find 209 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAACCTTTCTTTCTCATTT+TGG 0.103964 8.4:+18157543 None:intergenic
CATCTCTTGAGTGGACTTTC+AGG 0.168367 8.4:-18156893 MS.gene063483:CDS
AAGAACAATCCTGTTCTTAT+TGG 0.183649 8.4:-18159084 MS.gene063483:CDS
TTTCAAGCATTGAAGACTTA+TGG 0.255904 8.4:-18159201 MS.gene063483:CDS
GGGAAGCTTGATCCTGTTAT+TGG 0.264082 8.4:-18159156 MS.gene063483:CDS
TTCTTATTCCTTGGTCCAAC+TGG 0.268223 8.4:-18157398 MS.gene063483:CDS
CTCTCTAGCCACCTTCTAAT+TGG 0.271216 8.4:+18156499 None:intergenic
ATGAGATTCATCTTGTTCTT+GGG 0.276920 8.4:-18158846 MS.gene063483:CDS
TCCAGTCGGTTCAACAATTC+TGG 0.285531 8.4:+18156809 None:intergenic
GATGAGATTCATCTTGTTCT+TGG 0.287438 8.4:-18158847 MS.gene063483:CDS
AAGCCGGTGTTGCTGTTTCT+AGG 0.291735 8.4:-18159296 MS.gene063483:CDS
GGCTAACAACCTCGGCTATT+TGG 0.297052 8.4:+18157597 None:intergenic
TAGGTTAATTGCTTTGGATA+TGG 0.306154 8.4:-18158974 MS.gene063483:CDS
TCTTCGTCGCGTCCAATAAC+AGG 0.320228 8.4:+18159144 None:intergenic
CAAGCAATTTCAAACGTTGC+TGG 0.347559 8.4:-18159540 MS.gene063483:CDS
AGCTGTTGATCAGTTAATCT+TGG 0.350267 8.4:-18159358 MS.gene063483:CDS
GGGATTGTTAATGCTGAAAC+TGG 0.353298 8.4:-18156355 MS.gene063483:CDS
AAGGCAGAACTGTGGACTTT+AGG 0.354025 8.4:-18156955 MS.gene063483:CDS
TTGTTTCTTGTGTAGGTGTA+TGG 0.362917 8.4:-18156529 MS.gene063483:intron
TGGTTGCTGGTGCGAAGTAT+AGG 0.370808 8.4:-18158945 MS.gene063483:CDS
AGGAAGTAAGAAGGCATTTC+AGG 0.374785 8.4:-18156832 MS.gene063483:CDS
ACTGGTTCCTTCTTATTCCT+TGG 0.375288 8.4:-18157407 MS.gene063483:CDS
TTGAGATCAAGAGCTGGTTT+AGG 0.379830 8.4:-18157446 MS.gene063483:CDS
AGGTTAATTGCTTTGGATAT+GGG 0.380520 8.4:-18158973 MS.gene063483:CDS
AGAGCTGCGGACCTGCGATA+TGG 0.381156 8.4:-18157719 MS.gene063483:CDS
ATATCGCAGGTCCGCAGCTC+TGG 0.381186 8.4:+18157721 None:intergenic
GAGGGGTAAAGATGGGAAAA+AGG 0.388224 8.4:-18159250 MS.gene063483:CDS
GATATGGGAGCACTGGTTGC+TGG 0.390282 8.4:-18158958 MS.gene063483:CDS
CTAGCAATCTTGCTGATGTT+AGG 0.395088 8.4:-18158993 MS.gene063483:CDS
CTCAATTGCTCATGTGATAG+AGG 0.400181 8.4:+18156767 None:intergenic
GGTTGCTGGTGCGAAGTATA+GGG 0.400576 8.4:-18158944 MS.gene063483:CDS
CCTGTTCTTATTGGTGAGCC+TGG 0.401053 8.4:-18159075 MS.gene063483:CDS
TGATGTTAGGTTAATTGCTT+TGG 0.410605 8.4:-18158980 MS.gene063483:CDS
ACCGAAAAGTGATGCTGTTC+AGG 0.411960 8.4:-18156296 MS.gene063483:CDS
GCTGTTGATCAGTTAATCTT+GGG 0.422333 8.4:-18159357 MS.gene063483:CDS
TAGAATTGATGCAAGGTGTA+AGG 0.422834 8.4:+18159590 None:intergenic
GTGCTACCAGGCACTTCATC+TGG 0.425997 8.4:+18159444 None:intergenic
AAGATGCAGCATTTGAAAGA+AGG 0.427986 8.4:-18158705 MS.gene063483:CDS
CTTCTCCAAGTCTTGGATGA+TGG 0.430205 8.4:-18156995 MS.gene063483:CDS
TGTGGCTGAACCTAGTGTTC+CGG 0.430850 8.4:-18158668 MS.gene063483:CDS
CAGCAACGTTTGAAATTGCT+TGG 0.431831 8.4:+18159541 None:intergenic
CACTCTGTATCAAGATTGAT+TGG 0.432459 8.4:-18157278 MS.gene063483:CDS
TTCCTTGGTCCAACTGGTGT+TGG 0.432663 8.4:-18157392 MS.gene063483:CDS
CGTGGACAGCTTCGATGTAT+TGG 0.435873 8.4:-18158766 MS.gene063483:CDS
TCAAGATTGTCAATTTCCTC+AGG 0.437119 8.4:+18158334 None:intergenic
TGCTTTGGATATGGGAGCAC+TGG 0.439570 8.4:-18158965 MS.gene063483:CDS
ATTTGAAAGAAGGTTTCAAC+AGG 0.441868 8.4:-18158695 MS.gene063483:CDS
ATTCATCTTGTTCTTGGGGC+TGG 0.444791 8.4:-18158841 MS.gene063483:CDS
GTCAATTAACAGAAGCTGTA+AGG 0.446297 8.4:-18157084 MS.gene063483:CDS
ATGCTCAGCACCAAGGTTAG+AGG 0.449435 8.4:+18156913 None:intergenic
TTACATTGATGCTGGTCCTA+AGG 0.450753 8.4:-18156413 MS.gene063483:CDS
AAAACAAACGAAGCACTTGC+TGG 0.455382 8.4:-18159657 MS.gene063483:CDS
ACTAAATCAATCGCCTTGTC+AGG 0.457433 8.4:+18158400 None:intergenic
GGAAGTTGATGATGATGAAA+TGG 0.457919 8.4:-18156251 MS.gene063483:CDS
AAGGTTTCAACAGGTTTATG+TGG 0.465704 8.4:-18158686 MS.gene063483:CDS
TGCTCGCGATCGAGTGATGC+AGG 0.466652 8.4:-18156852 MS.gene063483:CDS
CACGAGCTAGCAATGACTTC+AGG 0.466831 8.4:-18159630 MS.gene063483:CDS
TTCTCCAAGTCTTGGATGAT+GGG 0.466986 8.4:-18156994 MS.gene063483:CDS
CTACAACGCTTGAGGAGTAT+AGG 0.468012 8.4:-18158741 MS.gene063483:CDS
ATTCTCGAGGATTCTCAGAT+TGG 0.468883 8.4:-18159333 MS.gene063483:CDS
AGAGCTCATCTTTGCACTAC+AGG 0.471282 8.4:-18157768 MS.gene063483:CDS
TTGTCTAGTCGGTACATAAC+CGG 0.472293 8.4:-18158553 MS.gene063483:intron
AATCTTGAAGGTAGCACTGA+TGG 0.474434 8.4:-18157665 MS.gene063483:CDS
AATTGACATGTCGGAGTACA+TGG 0.475392 8.4:-18157306 MS.gene063483:CDS
AGGTATGTTGGACATGAAGA+AGG 0.476815 8.4:-18157109 MS.gene063483:CDS
AAAGAAAGGTTGGTTGGACT+TGG 0.479433 8.4:-18157533 MS.gene063483:CDS
TTGGCTCAGAGGATTGTTAG+AGG 0.480511 8.4:-18159024 MS.gene063483:CDS
ATTCTGATTCAGATTCCAAA+TGG 0.480850 8.4:-18156319 MS.gene063483:CDS
CGAAGAATGCTAATTGTATC+CGG 0.481651 8.4:+18158649 None:intergenic
CAACACTCTTCTCCAAGTCT+TGG 0.482364 8.4:-18157002 MS.gene063483:CDS
TTGATAAGCGCGGTGCTACC+AGG 0.482529 8.4:+18159432 None:intergenic
TAGAAGGTGGCTAGAGAGGA+AGG 0.489310 8.4:-18156494 MS.gene063483:CDS
GGTGATTTGTTTAAAGAAGC+CGG 0.497778 8.4:-18159312 MS.gene063483:CDS
CAATTAGAAGGTGGCTAGAG+AGG 0.498681 8.4:-18156498 MS.gene063483:CDS
GGAAGACCTCAACAACCAAC+TGG 0.500438 8.4:-18157425 MS.gene063483:CDS
AGAGACTTGGTTGAACAAGC+AGG 0.500744 8.4:-18159177 MS.gene063483:CDS
AGTATAGTAAAGAGAAAGAG+AGG 0.501091 8.4:-18157826 MS.gene063483:CDS
AATGAGAAAGAAAGGTTGGT+TGG 0.503006 8.4:-18157539 MS.gene063483:CDS
AGATTGATTGGTGCACCACC+AGG 0.503361 8.4:-18157266 MS.gene063483:CDS
CCAGGCTCACCAATAAGAAC+AGG 0.503576 8.4:+18159075 None:intergenic
GATACAATTAGCATTCTTCG+TGG 0.503772 8.4:-18158646 MS.gene063483:CDS
AGGTTGTGACAGAGCTGTCT+AGG 0.503837 8.4:-18156474 MS.gene063483:CDS
CTTATTGGTGAGCCTGGTGT+TGG 0.504009 8.4:-18159069 MS.gene063483:CDS
AGCCGGTGTTGCTGTTTCTA+GGG 0.504464 8.4:-18159295 MS.gene063483:CDS
TGAGATTCATCTTGTTCTTG+GGG 0.504648 8.4:-18158845 MS.gene063483:CDS
AGTTGAAGAAGCTGAAGGGA+AGG 0.506548 8.4:-18158884 MS.gene063483:CDS
GAAAAGCTGAGGGGTAAAGA+TGG 0.507731 8.4:-18159258 MS.gene063483:CDS
TGAATTTGAGGAGAGGTTGA+AGG 0.507933 8.4:-18158920 MS.gene063483:CDS
AAAGAAGTTGAAGAAGCTGA+AGG 0.507975 8.4:-18158889 MS.gene063483:CDS
TGGATTAAAAGAGAGATATG+AGG 0.510884 8.4:-18158626 MS.gene063483:CDS
ACAACGGTTTACATTGATGC+TGG 0.514218 8.4:-18156421 MS.gene063483:CDS
CTAATTGTATCCGGAACACT+AGG 0.517001 8.4:+18158658 None:intergenic
CCAAAATGAGAAAGAAAGGT+TGG 0.517592 8.4:-18157543 MS.gene063483:CDS
GAAGTATAGGGGTGAATTTG+AGG 0.518020 8.4:-18158932 MS.gene063483:CDS
AGCTGTCCACGAGCAAGCAT+TGG 0.520046 8.4:+18158778 None:intergenic
TACATTGATGCTGGTCCTAA+GGG 0.520358 8.4:-18156412 MS.gene063483:CDS
ACCTCCCATCATCCAAGACT+TGG 0.521134 8.4:+18156990 None:intergenic
TAGCCGATGGACTGGTATAC+CGG 0.521383 8.4:-18157579 MS.gene063483:CDS
AGACTGCACACTAGAGTTGT+GGG 0.523577 8.4:-18157506 MS.gene063483:CDS
AAAAGCTGAGGGGTAAAGAT+GGG 0.524371 8.4:-18159257 MS.gene063483:CDS
GGCGATTGATTTAGTTGATG+AGG 0.524818 8.4:-18158392 MS.gene063483:CDS
GCTTGGAAGAAAATACCGTT+AGG 0.527952 8.4:+18159558 None:intergenic
GCATACCGTGTAGAAAAGAA+TGG 0.529493 8.4:-18156379 MS.gene063483:CDS
ACAACCTCGGCTATTTGGTC+CGG 0.530467 8.4:+18157602 None:intergenic
TATGCTAAATCACTTCCCTT+AGG 0.532281 8.4:+18156397 None:intergenic
TTACTATACTTCATCTTCAG+AGG 0.533219 8.4:+18157839 None:intergenic
ATAGGGGTGAATTTGAGGAG+AGG 0.533373 8.4:-18158927 MS.gene063483:CDS
TTGGCCAAAATGAGAAAGAA+AGG 0.533425 8.4:-18157547 MS.gene063483:CDS
GGTTGCAAGGTTGCAAATGA+AGG 0.533779 8.4:-18156741 MS.gene063483:CDS
AAGGAACCAGTTGGTTGTTG+AGG 0.534620 8.4:+18157419 None:intergenic
GAGGTTGTTAGCCGATGGAC+TGG 0.535262 8.4:-18157587 MS.gene063483:CDS
ATCATCATGACCTCTAACCT+TGG 0.536499 8.4:-18156923 MS.gene063483:CDS
AGGAAATTGACAATCTTGAA+AGG 0.539527 8.4:-18158330 MS.gene063483:CDS
AACCGCGGTTGTTGAAGGGT+TGG 0.544086 8.4:-18159043 MS.gene063483:CDS
CTAACATCAGCAAGATTGCT+AGG 0.545324 8.4:+18158994 None:intergenic
AGAATTGATGCAAGGTGTAA+GGG 0.547836 8.4:+18159591 None:intergenic
GCCAGAATTGTTGAACCGAC+TGG 0.548964 8.4:-18156810 MS.gene063483:CDS
CAGCAACAGCATTAACCGCC+TGG 0.549246 8.4:+18157477 None:intergenic
ATCACATGAGCAATTGAGAA+AGG 0.549247 8.4:-18156762 MS.gene063483:CDS
AACCCTAGAAACAGCAACAC+CGG 0.556906 8.4:+18159293 None:intergenic
AACTGAGGTTGAAAAGCTGA+GGG 0.557131 8.4:-18159268 MS.gene063483:CDS
GGTATGTTGGACATGAAGAA+GGG 0.557789 8.4:-18157108 MS.gene063483:CDS
CTTGGGGCTGGTAGAACAGA+AGG 0.557876 8.4:-18158829 MS.gene063483:CDS
TCCAAGTCTTGGATGATGGG+AGG 0.558720 8.4:-18156991 MS.gene063483:CDS
GAGAGATATGAGGGTCATCA+TGG 0.559334 8.4:-18158616 MS.gene063483:CDS
GGATTGTTAATGCTGAAACT+GGG 0.559679 8.4:-18156354 MS.gene063483:CDS
TAGAGTTGTGGGACAAGACC+AGG 0.560454 8.4:-18157495 MS.gene063483:CDS
GAAGACTTATGGAAGAGACT+TGG 0.562344 8.4:-18159190 MS.gene063483:CDS
TGTCAAGAAAATGAGAATTG+AGG 0.563545 8.4:-18156272 MS.gene063483:CDS
CTTCAATTGCACCATATCGC+AGG 0.563940 8.4:+18157708 None:intergenic
AAGAAGTTGAAGAAGCTGAA+GGG 0.564464 8.4:-18158888 MS.gene063483:CDS
TGCTGAGAGAGGAATTGCAT+TGG 0.564643 8.4:-18156702 MS.gene063483:CDS
CATACTTACATCTACAAGAC+GGG 0.566138 8.4:+18158243 None:intergenic
GTTGACTGAAACAGTTGGAC+CGG 0.571247 8.4:-18157621 MS.gene063483:CDS
GGACTGGTATACCGGTGACT+AGG 0.572247 8.4:-18157571 MS.gene063483:CDS
ATCTTGAAGGTAGCACTGAT+GGG 0.576475 8.4:-18157664 MS.gene063483:CDS
GTTAATCTTGGGAATTCTCG+AGG 0.577968 8.4:-18159346 MS.gene063483:CDS
GGTGCTGAGCATCTCTTGAG+TGG 0.579664 8.4:-18156902 MS.gene063483:CDS
CCAGGCACTTCATCTGGTGG+AGG 0.580312 8.4:+18159450 None:intergenic
CAGACTGCACACTAGAGTTG+TGG 0.580593 8.4:-18157507 MS.gene063483:CDS
TAGCCGAGGTTGTTAGCCGA+TGG 0.581783 8.4:-18157592 MS.gene063483:CDS
GGTATACCGGTGACTAGGCT+TGG 0.582136 8.4:-18157566 MS.gene063483:CDS
CCTCCACCAGATGAAGTGCC+TGG 0.583174 8.4:-18159450 MS.gene063483:CDS
TTGCAGCTCAATTGTCTAGT+CGG 0.583231 8.4:-18158564 MS.gene063483:CDS
CTACCAGGCACTTCATCTGG+TGG 0.583721 8.4:+18159447 None:intergenic
TTTAAACCAATGCTTGCTCG+TGG 0.585207 8.4:-18158784 MS.gene063483:CDS
GAGTGATGCAGGAAGTAAGA+AGG 0.587622 8.4:-18156841 MS.gene063483:CDS
TAACAGAAGCTGTAAGGAGA+AGG 0.589440 8.4:-18157078 MS.gene063483:CDS
AGCAATTGAGAAAGGTTGCA+AGG 0.593285 8.4:-18156754 MS.gene063483:CDS
AGAGGATTGATGAGATTCGA+AGG 0.595177 8.4:-18157808 MS.gene063483:CDS
TTGTTGAAGGGTTGGCTCAG+AGG 0.595730 8.4:-18159035 MS.gene063483:CDS
TCGATCGCGAGCAGCTTGCA+TGG 0.599673 8.4:+18156862 None:intergenic
TGGTAAAACTGAGCTTGCAA+AGG 0.600639 8.4:-18157372 MS.gene063483:CDS
ATTCTAGTTTCTGATCCTAA+CGG 0.601379 8.4:-18159573 MS.gene063483:CDS
AAACTGAGGTTGAAAAGCTG+AGG 0.602048 8.4:-18159269 MS.gene063483:CDS
TATTGGTGCTACAACGCTTG+AGG 0.605062 8.4:-18158749 MS.gene063483:CDS
AGTTGGACCAAGGAATAAGA+AGG 0.606835 8.4:+18157400 None:intergenic
TTAATGTTGACTGAAACAGT+TGG 0.611185 8.4:-18157626 MS.gene063483:CDS
GGCGGTTAATGCTGTTGCTG+AGG 0.611492 8.4:-18157474 MS.gene063483:CDS
TGTTTCTAGGGTTAAAACTG+AGG 0.616506 8.4:-18159283 MS.gene063483:CDS
TACCGTGTAGAAAAGAATGG+AGG 0.617392 8.4:-18156376 MS.gene063483:CDS
GGATTAAAAGAGAGATATGA+GGG 0.617828 8.4:-18158625 MS.gene063483:CDS
CAATTCCTCTCTCAGCAAGA+CGG 0.617980 8.4:+18156708 None:intergenic
GCTAGCCGTCTTGCTGAGAG+AGG 0.619045 8.4:-18156713 MS.gene063483:CDS
CCATACTTACATCTACAAGA+CGG 0.619404 8.4:+18158242 None:intergenic
TACCAACACCAGTTGGACCA+AGG 0.623035 8.4:+18157390 None:intergenic
TCATGCTCTAGAGAAAGAGA+AGG 0.626681 8.4:-18158281 MS.gene063483:CDS
GAGACTTGGTTGAACAAGCA+GGG 0.628162 8.4:-18159176 MS.gene063483:CDS
ATTTGATGATGAAAATCAGT+TGG 0.628949 8.4:-18157333 MS.gene063483:CDS
ACCGTGTAGAAAAGAATGGA+GGG 0.629952 8.4:-18156375 MS.gene063483:CDS
AGGAATAAGAAGGAACCAGT+TGG 0.632548 8.4:+18157410 None:intergenic
GGGAGGTTGACTGACGGACA+AGG 0.633232 8.4:-18156974 MS.gene063483:CDS
GCTGTATTGAGATCAAGAGC+TGG 0.635226 8.4:-18157452 MS.gene063483:CDS
TCTGGTGGAGGTGATTGAGA+TGG 0.640106 8.4:+18159462 None:intergenic
AAGAGATTCGAAGAGTTGTG+AGG 0.646944 8.4:-18159125 MS.gene063483:CDS
GTTGGTGAGAATTGACATGT+CGG 0.648441 8.4:-18157315 MS.gene063483:CDS
ATGGTGCTAGACCAATTAGA+AGG 0.648738 8.4:-18156510 MS.gene063483:CDS
AGGGCGTCATCTACCTGACA+AGG 0.649063 8.4:-18158413 MS.gene063483:CDS
AGCCAACCCTTCAACAACCG+CGG 0.649201 8.4:+18159041 None:intergenic
CAGAAACTAGAATTGATGCA+AGG 0.649347 8.4:+18159583 None:intergenic
TGGTAGAACAGAAGGATCGA+TGG 0.650995 8.4:-18158821 MS.gene063483:CDS
GTATGTTGGACATGAAGAAG+GGG 0.651475 8.4:-18157107 MS.gene063483:CDS
TGCATTGGCAGTAACAGATG+CGG 0.653933 8.4:-18156687 MS.gene063483:CDS
ATATGGTGCAATTGAAGAGG+TGG 0.654225 8.4:-18157702 MS.gene063483:CDS
TCACCGGTATACCAGTCCAT+CGG 0.655399 8.4:+18157576 None:intergenic
AGAAATTGATGAAAATACAA+CGG 0.657908 8.4:-18156437 MS.gene063483:CDS
AAGGTTGCAAATGAAGGATG+TGG 0.660475 8.4:-18156735 MS.gene063483:CDS
ACGAATCGCTTTGATAAGCG+CGG 0.664960 8.4:+18159422 None:intergenic
ATACAACAACTTCGTCCAGT+CGG 0.665392 8.4:+18156795 None:intergenic
GTTGCTGGTGCGAAGTATAG+GGG 0.666198 8.4:-18158943 MS.gene063483:CDS
TCAAGAGATGCTCAGCACCA+AGG 0.666994 8.4:+18156906 None:intergenic
AGTCCATCGGCTAACAACCT+CGG 0.668166 8.4:+18157589 None:intergenic
CACTACAGGAGGCAGAGAGG+CGG 0.668262 8.4:-18157754 MS.gene063483:CDS
GTGCTAGACCAATTAGAAGG+TGG 0.668833 8.4:-18156507 MS.gene063483:CDS
GCTCATCTTTGCACTACAGG+AGG 0.670257 8.4:-18157765 MS.gene063483:CDS
GATTGTTAATGCTGAAACTG+GGG 0.676690 8.4:-18156353 MS.gene063483:CDS
TGACGGACAAGGCAGAACTG+TGG 0.678310 8.4:-18156963 MS.gene063483:CDS
GTATGATCTAGCCAGAGCTG+CGG 0.683383 8.4:-18157732 MS.gene063483:CDS
TCAACTTGATAGTCAGCCTG+AGG 0.685328 8.4:-18158350 MS.gene063483:CDS
GATTGATTGGTGCACCACCA+GGG 0.685797 8.4:-18157265 MS.gene063483:intron
GCGATATGGTGCAATTGAAG+AGG 0.687694 8.4:-18157705 MS.gene063483:CDS
CAAGCTGCACAGAAATCACG+TGG 0.691575 8.4:-18159393 MS.gene063483:CDS
AATCTAATAACTTACCCTGG+TGG 0.704597 8.4:+18157251 None:intergenic
TGGACCGGACCAAATAGCCG+AGG 0.708477 8.4:-18157606 MS.gene063483:CDS
TATGTTGGACATGAAGAAGG+GGG 0.714139 8.4:-18157106 MS.gene063483:CDS
TTGCACTACAGGAGGCAGAG+AGG 0.722486 8.4:-18157757 MS.gene063483:CDS
GATGATGGGAGGTTGACTGA+CGG 0.725487 8.4:-18156980 MS.gene063483:CDS
ACTGAGGTTGAAAAGCTGAG+GGG 0.737026 8.4:-18159267 MS.gene063483:CDS
AGTTGTGGGACAAGACCAGG+CGG 0.784379 8.4:-18157492 MS.gene063483:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATAAAATTTGACTAAATA+TGG + chr8.4:18157821-18157840 None:intergenic 15.0%
!! TATAATATAATAACACTTAC+TGG + chr8.4:18159295-18159314 None:intergenic 15.0%
!!! TATTAGTCTAAATAATATTC+AGG + chr8.4:18158703-18158722 None:intergenic 15.0%
!! AGAAATTGATGAAAATACAA+CGG - chr8.4:18159487-18159506 MS.gene063483:CDS 20.0%
!! ATAGAATATTTCAGACAAAA+TGG - chr8.4:18159337-18159356 MS.gene063483:CDS 20.0%
!! ATAGTATCATCTTATTCTTT+AGG - chr8.4:18159312-18159331 MS.gene063483:CDS 20.0%
!! TTAATAAACATTCTAGTATG+TGG - chr8.4:18158754-18158773 MS.gene063483:CDS 20.0%
! ACTGCAATTAAAAATCTTGA+AGG - chr8.4:18158247-18158266 MS.gene063483:intron 25.0%
! AGAGAATATAAAGAACATAC+CGG + chr8.4:18157393-18157412 None:intergenic 25.0%
! CATCAAAATTAATGCTATCA+TGG + chr8.4:18157753-18157772 None:intergenic 25.0%
! CTAAGTACATAACTATATTG+TGG - chr8.4:18157918-18157937 MS.gene063483:intron 25.0%
!! TCATTTTGCATTGAATTTTC+AGG - chr8.4:18158795-18158814 MS.gene063483:CDS 25.0%
!!! ATTTGATGATGAAAATCAGT+TGG - chr8.4:18158591-18158610 MS.gene063483:CDS 25.0%
AAGAACAATCCTGTTCTTAT+TGG - chr8.4:18156840-18156859 MS.gene063483:CDS 30.0%
AGGAAATTGACAATCTTGAA+AGG - chr8.4:18157594-18157613 MS.gene063483:CDS 30.0%
AGTACATAACTATATTGTGG+TGG - chr8.4:18157921-18157940 MS.gene063483:intron 30.0%
AGTATAGTAAAGAGAAAGAG+AGG - chr8.4:18158098-18158117 MS.gene063483:intron 30.0%
ATGAGATTCATCTTGTTCTT+GGG - chr8.4:18157078-18157097 MS.gene063483:CDS 30.0%
ATGTGTTCTGTATGTGTTAA+GGG - chr8.4:18157492-18157511 MS.gene063483:CDS 30.0%
ATTCTGATTCAGATTCCAAA+TGG - chr8.4:18159605-18159624 MS.gene063483:CDS 30.0%
ATTTGAAAGAAGGTTTCAAC+AGG - chr8.4:18157229-18157248 MS.gene063483:intron 30.0%
GGATTAAAAGAGAGATATGA+GGG - chr8.4:18157299-18157318 MS.gene063483:CDS 30.0%
TAGTGGCTAATAATACTAAC+TGG - chr8.4:18159360-18159379 MS.gene063483:CDS 30.0%
TATGTGTTCTGTATGTGTTA+AGG - chr8.4:18157491-18157510 MS.gene063483:CDS 30.0%
TATTTCAGACAAAATGGTAG+TGG - chr8.4:18159343-18159362 MS.gene063483:CDS 30.0%
TCATATTTAACTCTAGCTAC+TGG + chr8.4:18158733-18158752 None:intergenic 30.0%
TGATGTTAGGTTAATTGCTT+TGG - chr8.4:18156944-18156963 MS.gene063483:CDS 30.0%
TGGATTAAAAGAGAGATATG+AGG - chr8.4:18157298-18157317 MS.gene063483:CDS 30.0%
TGTCAAGAAAATGAGAATTG+AGG - chr8.4:18159652-18159671 MS.gene063483:CDS 30.0%
TTACTATACTTCATCTTCAG+AGG + chr8.4:18158088-18158107 None:intergenic 30.0%
! AGGTTAATTGCTTTGGATAT+GGG - chr8.4:18156951-18156970 MS.gene063483:CDS 30.0%
! GTTTTGTGAGTAAATTTCTC+TGG + chr8.4:18156252-18156271 None:intergenic 30.0%
! TAGGTTAATTGCTTTGGATA+TGG - chr8.4:18156950-18156969 MS.gene063483:CDS 30.0%
! TCAAAAAGTACAACACTGTA+TGG + chr8.4:18158872-18158891 None:intergenic 30.0%
! TTAATGTTGACTGAAACAGT+TGG - chr8.4:18158298-18158317 MS.gene063483:CDS 30.0%
!! ATTCTAGTTTCTGATCCTAA+CGG - chr8.4:18156351-18156370 MS.gene063483:CDS 30.0%
!! GTTATTGTTGTTTCTTGTGT+AGG - chr8.4:18159388-18159407 MS.gene063483:CDS 30.0%
!! TTTCAAGCATTGAAGACTTA+TGG - chr8.4:18156723-18156742 MS.gene063483:CDS 30.0%
!!! CATTGAATTTTCAGGTATGT+TGG - chr8.4:18158803-18158822 MS.gene063483:CDS 30.0%
AAAGAAGTTGAAGAAGCTGA+AGG - chr8.4:18157035-18157054 MS.gene063483:CDS 35.0%
AAGAAGTTGAAGAAGCTGAA+GGG - chr8.4:18157036-18157055 MS.gene063483:CDS 35.0%
AAGATGCAGCATTTGAAAGA+AGG - chr8.4:18157219-18157238 MS.gene063483:intron 35.0%
AAGGTTTCAACAGGTTTATG+TGG - chr8.4:18157238-18157257 MS.gene063483:intron 35.0%
AATCTAATAACTTACCCTGG+TGG + chr8.4:18158676-18158695 None:intergenic 35.0%
ACGAATCTAATAACTTACCC+TGG + chr8.4:18158679-18158698 None:intergenic 35.0%
AGAATTGATGCAAGGTGTAA+GGG + chr8.4:18156336-18156355 None:intergenic 35.0%
AGCTGTTGATCAGTTAATCT+TGG - chr8.4:18156566-18156585 MS.gene063483:intron 35.0%
ATCACATGAGCAATTGAGAA+AGG - chr8.4:18159162-18159181 MS.gene063483:CDS 35.0%
CACTCTGTATCAAGATTGAT+TGG - chr8.4:18158646-18158665 MS.gene063483:CDS 35.0%
CACTTGTGTTTATGCTAACA+TGG - chr8.4:18157468-18157487 MS.gene063483:CDS 35.0%
CAGAAACTAGAATTGATGCA+AGG + chr8.4:18156344-18156363 None:intergenic 35.0%
CATACTTACATCTACAAGAC+GGG + chr8.4:18157684-18157703 None:intergenic 35.0%
CCAAAATGAGAAAGAAAGGT+TGG - chr8.4:18158381-18158400 MS.gene063483:CDS 35.0%
CCATACTTACATCTACAAGA+CGG + chr8.4:18157685-18157704 None:intergenic 35.0%
CGAAGAATGCTAATTGTATC+CGG + chr8.4:18157278-18157297 None:intergenic 35.0%
GATACAATTAGCATTCTTCG+TGG - chr8.4:18157278-18157297 MS.gene063483:CDS 35.0%
GATGAGATTCATCTTGTTCT+TGG - chr8.4:18157077-18157096 MS.gene063483:CDS 35.0%
GATTGTTAATGCTGAAACTG+GGG - chr8.4:18159571-18159590 MS.gene063483:CDS 35.0%
GCTGTTGATCAGTTAATCTT+GGG - chr8.4:18156567-18156586 MS.gene063483:intron 35.0%
GGATTGTTAATGCTGAAACT+GGG - chr8.4:18159570-18159589 MS.gene063483:CDS 35.0%
GTCAATTAACAGAAGCTGTA+AGG - chr8.4:18158840-18158859 MS.gene063483:CDS 35.0%
TAGAATTGATGCAAGGTGTA+AGG + chr8.4:18156337-18156356 None:intergenic 35.0%
TATGCTAAATCACTTCCCTT+AGG + chr8.4:18159530-18159549 None:intergenic 35.0%
TCAAGATTGTCAATTTCCTC+AGG + chr8.4:18157593-18157612 None:intergenic 35.0%
TGAGATTCATCTTGTTCTTG+GGG - chr8.4:18157079-18157098 MS.gene063483:CDS 35.0%
TTGGCCAAAATGAGAAAGAA+AGG - chr8.4:18158377-18158396 MS.gene063483:CDS 35.0%
! AATGAGAAAGAAAGGTTGGT+TGG - chr8.4:18158385-18158404 MS.gene063483:CDS 35.0%
! CCAACCTTTCTTTCTCATTT+TGG + chr8.4:18158384-18158403 None:intergenic 35.0%
! TGATAGTTGATGTTATTCGC+AGG - chr8.4:18158024-18158043 MS.gene063483:intron 35.0%
! TTGTGAGGATTTTGTCAAGA+AGG - chr8.4:18156814-18156833 MS.gene063483:CDS 35.0%
! TTGTTTCTTGTGTAGGTGTA+TGG - chr8.4:18159395-18159414 MS.gene063483:CDS 35.0%
!! AAAAAGGTTGAAAGTGCTTC+TGG - chr8.4:18156690-18156709 MS.gene063483:CDS 35.0%
!! GGAAGTTGATGATGATGAAA+TGG - chr8.4:18159673-18159692 MS.gene063483:CDS 35.0%
!! GGTGATTTGTTTAAAGAAGC+CGG - chr8.4:18156612-18156631 MS.gene063483:intron 35.0%
!! TGTTTCTAGGGTTAAAACTG+AGG - chr8.4:18156641-18156660 MS.gene063483:intron 35.0%
!! TTAACTCTAGCTACTGGTTT+AGG + chr8.4:18158727-18158746 None:intergenic 35.0%
AAAAGCTGAGGGGTAAAGAT+GGG - chr8.4:18156667-18156686 MS.gene063483:CDS 40.0%
AAACTGAGGTTGAAAAGCTG+AGG - chr8.4:18156655-18156674 MS.gene063483:CDS 40.0%
AACTGAGGTTGAAAAGCTGA+GGG - chr8.4:18156656-18156675 MS.gene063483:CDS 40.0%
AAGAGATTCGAAGAGTTGTG+AGG - chr8.4:18156799-18156818 MS.gene063483:CDS 40.0%
AAGGTTGCAAATGAAGGATG+TGG - chr8.4:18159189-18159208 MS.gene063483:CDS 40.0%
AATTGACATGTCGGAGTACA+TGG - chr8.4:18158618-18158637 MS.gene063483:CDS 40.0%
ACAACGGTTTACATTGATGC+TGG - chr8.4:18159503-18159522 MS.gene063483:CDS 40.0%
ACCGTGTAGAAAAGAATGGA+GGG - chr8.4:18159549-18159568 MS.gene063483:CDS 40.0%
ACTAAATCAATCGCCTTGTC+AGG + chr8.4:18157527-18157546 None:intergenic 40.0%
AGAGGATTGATGAGATTCGA+AGG - chr8.4:18158116-18158135 MS.gene063483:intron 40.0%
AGCAATTGAGAAAGGTTGCA+AGG - chr8.4:18159170-18159189 MS.gene063483:CDS 40.0%
AGGAATAAGAAGGAACCAGT+TGG + chr8.4:18158517-18158536 None:intergenic 40.0%
AGGTATGTTGGACATGAAGA+AGG - chr8.4:18158815-18158834 MS.gene063483:CDS 40.0%
AGTTGGACCAAGGAATAAGA+AGG + chr8.4:18158527-18158546 None:intergenic 40.0%
ATACAACAACTTCGTCCAGT+CGG + chr8.4:18159132-18159151 None:intergenic 40.0%
ATATGGTGCAATTGAAGAGG+TGG - chr8.4:18158222-18158241 MS.gene063483:intron 40.0%
ATCATCATGACCTCTAACCT+TGG - chr8.4:18159001-18159020 MS.gene063483:CDS 40.0%
ATTCTCGAGGATTCTCAGAT+TGG - chr8.4:18156591-18156610 MS.gene063483:intron 40.0%
CAAGCAATTTCAAACGTTGC+TGG - chr8.4:18156384-18156403 MS.gene063483:CDS 40.0%
CCGTCTTGTAGATGTAAGTA+TGG - chr8.4:18157682-18157701 MS.gene063483:CDS 40.0%
CTAACATCAGCAAGATTGCT+AGG + chr8.4:18156933-18156952 None:intergenic 40.0%
CTAATTGTATCCGGAACACT+AGG + chr8.4:18157269-18157288 None:intergenic 40.0%
CTAGCAATCTTGCTGATGTT+AGG - chr8.4:18156931-18156950 MS.gene063483:CDS 40.0%
CTCAATTGCTCATGTGATAG+AGG + chr8.4:18159160-18159179 None:intergenic 40.0%
GAAGACTTATGGAAGAGACT+TGG - chr8.4:18156734-18156753 MS.gene063483:CDS 40.0%
GAAGTATAGGGGTGAATTTG+AGG - chr8.4:18156992-18157011 MS.gene063483:CDS 40.0%
GCATACCGTGTAGAAAAGAA+TGG - chr8.4:18159545-18159564 MS.gene063483:CDS 40.0%
GCTTGGAAGAAAATACCGTT+AGG + chr8.4:18156369-18156388 None:intergenic 40.0%
GGGATTGTTAATGCTGAAAC+TGG - chr8.4:18159569-18159588 MS.gene063483:CDS 40.0%
GGTATGTTGGACATGAAGAA+GGG - chr8.4:18158816-18158835 MS.gene063483:CDS 40.0%
GTATGTTGGACATGAAGAAG+GGG - chr8.4:18158817-18158836 MS.gene063483:CDS 40.0%
GTTAATCTTGGGAATTCTCG+AGG - chr8.4:18156578-18156597 MS.gene063483:intron 40.0%
GTTGATGTTATTCGCAGGTA+CGG - chr8.4:18158029-18158048 MS.gene063483:intron 40.0%
TAACAGAAGCTGTAAGGAGA+AGG - chr8.4:18158846-18158865 MS.gene063483:CDS 40.0%
TACATTGATGCTGGTCCTAA+GGG - chr8.4:18159512-18159531 MS.gene063483:CDS 40.0%
TACCGTGTAGAAAAGAATGG+AGG - chr8.4:18159548-18159567 MS.gene063483:CDS 40.0%
TATGTTGGACATGAAGAAGG+GGG - chr8.4:18158818-18158837 MS.gene063483:CDS 40.0%
TGAATTTGAGGAGAGGTTGA+AGG - chr8.4:18157004-18157023 MS.gene063483:CDS 40.0%
TGGTAAAACTGAGCTTGCAA+AGG - chr8.4:18158552-18158571 MS.gene063483:intron 40.0%
TTACATTGATGCTGGTCCTA+AGG - chr8.4:18159511-18159530 MS.gene063483:CDS 40.0%
TTCTCCAAGTCTTGGATGAT+GGG - chr8.4:18158930-18158949 MS.gene063483:CDS 40.0%
TTCTTATTCCTTGGTCCAAC+TGG - chr8.4:18158526-18158545 MS.gene063483:intron 40.0%
TTGCAGCTCAATTGTCTAGT+CGG - chr8.4:18157360-18157379 MS.gene063483:CDS 40.0%
TTGTCTAGTCGGTACATAAC+CGG - chr8.4:18157371-18157390 MS.gene063483:CDS 40.0%
TTTAAACCAATGCTTGCTCG+TGG - chr8.4:18157140-18157159 MS.gene063483:intron 40.0%
! AAAACAAACGAAGCACTTGC+TGG - chr8.4:18156267-18156286 MS.gene063483:CDS 40.0%
! AAAGAAAGGTTGGTTGGACT+TGG - chr8.4:18158391-18158410 MS.gene063483:CDS 40.0%
! AATCTTGAAGGTAGCACTGA+TGG - chr8.4:18158259-18158278 MS.gene063483:CDS 40.0%
! ACTGGTTCCTTCTTATTCCT+TGG - chr8.4:18158517-18158536 MS.gene063483:intron 40.0%
! ATGGTGCTAGACCAATTAGA+AGG - chr8.4:18159414-18159433 MS.gene063483:CDS 40.0%
! CAGCAACGTTTGAAATTGCT+TGG + chr8.4:18156386-18156405 None:intergenic 40.0%
! GGCGATTGATTTAGTTGATG+AGG - chr8.4:18157532-18157551 MS.gene063483:CDS 40.0%
! GTTGGTGAGAATTGACATGT+CGG - chr8.4:18158609-18158628 MS.gene063483:CDS 40.0%
! TCAGTTTTACCAACACCAGT+TGG + chr8.4:18158544-18158563 None:intergenic 40.0%
! TCCCTCCATTCTTTTCTACA+CGG + chr8.4:18159553-18159572 None:intergenic 40.0%
! TTGAGATCAAGAGCTGGTTT+AGG - chr8.4:18158478-18158497 MS.gene063483:intron 40.0%
!! AGGAAGTAAGAAGGCATTTC+AGG - chr8.4:18159092-18159111 MS.gene063483:CDS 40.0%
!! ATCTTGAAGGTAGCACTGAT+GGG - chr8.4:18158260-18158279 MS.gene063483:CDS 40.0%
!! TCATGCTCTAGAGAAAGAGA+AGG - chr8.4:18157643-18157662 MS.gene063483:CDS 40.0%
AACCCTAGAAACAGCAACAC+CGG + chr8.4:18156634-18156653 None:intergenic 45.0%
AAGGAACCAGTTGGTTGTTG+AGG + chr8.4:18158508-18158527 None:intergenic 45.0%
AAGGCAGAACTGTGGACTTT+AGG - chr8.4:18158969-18158988 MS.gene063483:CDS 45.0%
ACCGAAAAGTGATGCTGTTC+AGG - chr8.4:18159628-18159647 MS.gene063483:CDS 45.0%
ACGAATCGCTTTGATAAGCG+CGG + chr8.4:18156505-18156524 None:intergenic 45.0%
ACTGAGGTTGAAAAGCTGAG+GGG - chr8.4:18156657-18156676 MS.gene063483:CDS 45.0%
AGACTGCACACTAGAGTTGT+GGG - chr8.4:18158418-18158437 MS.gene063483:intron 45.0%
AGAGCTCATCTTTGCACTAC+AGG - chr8.4:18158156-18158175 MS.gene063483:intron 45.0%
AGTTGAAGAAGCTGAAGGGA+AGG - chr8.4:18157040-18157059 MS.gene063483:CDS 45.0%
ATAGGGGTGAATTTGAGGAG+AGG - chr8.4:18156997-18157016 MS.gene063483:CDS 45.0%
ATTCATCTTGTTCTTGGGGC+TGG - chr8.4:18157083-18157102 MS.gene063483:CDS 45.0%
CAACACTCTTCTCCAAGTCT+TGG - chr8.4:18158922-18158941 MS.gene063483:CDS 45.0%
CAATTAGAAGGTGGCTAGAG+AGG - chr8.4:18159426-18159445 MS.gene063483:CDS 45.0%
CAATTCCTCTCTCAGCAAGA+CGG + chr8.4:18159219-18159238 None:intergenic 45.0%
CTCTCTAGCCACCTTCTAAT+TGG + chr8.4:18159428-18159447 None:intergenic 45.0%
CTTCAATTGCACCATATCGC+AGG + chr8.4:18158219-18158238 None:intergenic 45.0%
CTTCTCCAAGTCTTGGATGA+TGG - chr8.4:18158929-18158948 MS.gene063483:CDS 45.0%
GAAAAACCGCGGTTGTTGAA+GGG - chr8.4:18156877-18156896 MS.gene063483:CDS 45.0%
GAAAAGCTGAGGGGTAAAGA+TGG - chr8.4:18156666-18156685 MS.gene063483:CDS 45.0%
GAGAGATATGAGGGTCATCA+TGG - chr8.4:18157308-18157327 MS.gene063483:CDS 45.0%
GAGGGGTAAAGATGGGAAAA+AGG - chr8.4:18156674-18156693 MS.gene063483:CDS 45.0%
GAGTGATGCAGGAAGTAAGA+AGG - chr8.4:18159083-18159102 MS.gene063483:CDS 45.0%
GCGATATGGTGCAATTGAAG+AGG - chr8.4:18158219-18158238 MS.gene063483:intron 45.0%
GCTGTATTGAGATCAAGAGC+TGG - chr8.4:18158472-18158491 MS.gene063483:intron 45.0%
GGGAAGCTTGATCCTGTTAT+TGG - chr8.4:18156768-18156787 MS.gene063483:CDS 45.0%
GGTTGCAAGGTTGCAAATGA+AGG - chr8.4:18159183-18159202 MS.gene063483:CDS 45.0%
GTGCTAGACCAATTAGAAGG+TGG - chr8.4:18159417-18159436 MS.gene063483:CDS 45.0%
GTGCTGCAAATGTGGGATAA+TGG - chr8.4:18157943-18157962 MS.gene063483:intron 45.0%
GTTGACTGAAACAGTTGGAC+CGG - chr8.4:18158303-18158322 MS.gene063483:CDS 45.0%
TGCTGAGAGAGGAATTGCAT+TGG - chr8.4:18159222-18159241 MS.gene063483:CDS 45.0%
TGGTAGAACAGAAGGATCGA+TGG - chr8.4:18157103-18157122 MS.gene063483:CDS 45.0%
TTGGCTCAGAGGATTGTTAG+AGG - chr8.4:18156900-18156919 MS.gene063483:CDS 45.0%
! AGAGACTTGGTTGAACAAGC+AGG - chr8.4:18156747-18156766 MS.gene063483:CDS 45.0%
! CATCTCTTGAGTGGACTTTC+AGG - chr8.4:18159031-18159050 MS.gene063483:CDS 45.0%
! CTACAACGCTTGAGGAGTAT+AGG - chr8.4:18157183-18157202 MS.gene063483:intron 45.0%
! GAGACTTGGTTGAACAAGCA+GGG - chr8.4:18156748-18156767 MS.gene063483:CDS 45.0%
! TCAACTTGATAGTCAGCCTG+AGG - chr8.4:18157574-18157593 MS.gene063483:CDS 45.0%
! TCCAGTCGGTTCAACAATTC+TGG + chr8.4:18159118-18159137 None:intergenic 45.0%
! TGCATTGGCAGTAACAGATG+CGG - chr8.4:18159237-18159256 MS.gene063483:CDS 45.0%
!! GCATCACTTTTCGGTCCATT+TGG + chr8.4:18159623-18159642 None:intergenic 45.0%
!! GCCTGAACAGCATCACTTTT+CGG + chr8.4:18159632-18159651 None:intergenic 45.0%
!! TATTGGTGCTACAACGCTTG+AGG - chr8.4:18157175-18157194 MS.gene063483:intron 45.0%
ACAACCTCGGCTATTTGGTC+CGG + chr8.4:18158325-18158344 None:intergenic 50.0%
ACCTCCCATCATCCAAGACT+TGG + chr8.4:18158937-18158956 None:intergenic 50.0%
AGATTGATTGGTGCACCACC+AGG - chr8.4:18158658-18158677 MS.gene063483:CDS 50.0%
AGGTTGTGACAGAGCTGTCT+AGG - chr8.4:18159450-18159469 MS.gene063483:CDS 50.0%
ATGCTCAGCACCAAGGTTAG+AGG + chr8.4:18159014-18159033 None:intergenic 50.0%
CAAGCTGCACAGAAATCACG+TGG - chr8.4:18156531-18156550 MS.gene063483:intron 50.0%
CACGAGCTAGCAATGACTTC+AGG - chr8.4:18156294-18156313 MS.gene063483:CDS 50.0%
CAGACTGCACACTAGAGTTG+TGG - chr8.4:18158417-18158436 MS.gene063483:intron 50.0%
CCAGGCTCACCAATAAGAAC+AGG + chr8.4:18156852-18156871 None:intergenic 50.0%
CCTGTTCTTATTGGTGAGCC+TGG - chr8.4:18156849-18156868 MS.gene063483:CDS 50.0%
CGTGGACAGCTTCGATGTAT+TGG - chr8.4:18157158-18157177 MS.gene063483:intron 50.0%
CTTATTGGTGAGCCTGGTGT+TGG - chr8.4:18156855-18156874 MS.gene063483:CDS 50.0%
GATTGATTGGTGCACCACCA+GGG - chr8.4:18158659-18158678 MS.gene063483:CDS 50.0%
GCCAGAATTGTTGAACCGAC+TGG - chr8.4:18159114-18159133 MS.gene063483:CDS 50.0%
GCTCATCTTTGCACTACAGG+AGG - chr8.4:18158159-18158178 MS.gene063483:intron 50.0%
GGAAAAACCGCGGTTGTTGA+AGG - chr8.4:18156876-18156895 MS.gene063483:CDS 50.0%
GGAAGACCTCAACAACCAAC+TGG - chr8.4:18158499-18158518 MS.gene063483:intron 50.0%
GGCTAACAACCTCGGCTATT+TGG + chr8.4:18158330-18158349 None:intergenic 50.0%
GGTTGCTGGTGCGAAGTATA+GGG - chr8.4:18156980-18156999 MS.gene063483:CDS 50.0%
GTATGATCTAGCCAGAGCTG+CGG - chr8.4:18158192-18158211 MS.gene063483:intron 50.0%
GTTGCTGGTGCGAAGTATAG+GGG - chr8.4:18156981-18157000 MS.gene063483:CDS 50.0%
TACCAACACCAGTTGGACCA+AGG + chr8.4:18158537-18158556 None:intergenic 50.0%
TAGAAGGTGGCTAGAGAGGA+AGG - chr8.4:18159430-18159449 MS.gene063483:CDS 50.0%
TAGAGTTGTGGGACAAGACC+AGG - chr8.4:18158429-18158448 MS.gene063483:intron 50.0%
TCAAGAGATGCTCAGCACCA+AGG + chr8.4:18159021-18159040 None:intergenic 50.0%
TCACCGGTATACCAGTCCAT+CGG + chr8.4:18158351-18158370 None:intergenic 50.0%
TCTGGTGGAGGTGATTGAGA+TGG + chr8.4:18156465-18156484 None:intergenic 50.0%
TCTTCGTCGCGTCCAATAAC+AGG + chr8.4:18156783-18156802 None:intergenic 50.0%
TGGTTGCTGGTGCGAAGTAT+AGG - chr8.4:18156979-18156998 MS.gene063483:CDS 50.0%
TGTGGCTGAACCTAGTGTTC+CGG - chr8.4:18157256-18157275 MS.gene063483:intron 50.0%
TTCCTTGGTCCAACTGGTGT+TGG - chr8.4:18158532-18158551 MS.gene063483:intron 50.0%
! AGTCCATCGGCTAACAACCT+CGG + chr8.4:18158338-18158357 None:intergenic 50.0%
! TGCTTTGGATATGGGAGCAC+TGG - chr8.4:18156959-18156978 MS.gene063483:CDS 50.0%
! TTTTGGCCAAGCCTAGTCAC+CGG + chr8.4:18158367-18158386 None:intergenic 50.0%
!! AAGCCGGTGTTGCTGTTTCT+AGG - chr8.4:18156628-18156647 MS.gene063483:intron 50.0%
!! AGCCGGTGTTGCTGTTTCTA+GGG - chr8.4:18156629-18156648 MS.gene063483:intron 50.0%
!! GATGATGGGAGGTTGACTGA+CGG - chr8.4:18158944-18158963 MS.gene063483:CDS 50.0%
!! TAGCCGATGGACTGGTATAC+CGG - chr8.4:18158345-18158364 MS.gene063483:CDS 50.0%
!! TCCAAGTCTTGGATGATGGG+AGG - chr8.4:18158933-18158952 MS.gene063483:CDS 50.0%
!! TGTGGTGGTGCTGCAAATGT+GGG - chr8.4:18157936-18157955 MS.gene063483:intron 50.0%
!! TTGTGGTGGTGCTGCAAATG+TGG - chr8.4:18157935-18157954 MS.gene063483:intron 50.0%
!! TTGTTGAAGGGTTGGCTCAG+AGG - chr8.4:18156889-18156908 MS.gene063483:CDS 50.0%
AACCGCGGTTGTTGAAGGGT+TGG - chr8.4:18156881-18156900 MS.gene063483:CDS 55.0%
AGCCAACCCTTCAACAACCG+CGG + chr8.4:18156886-18156905 None:intergenic 55.0%
AGCTGTCCACGAGCAAGCAT+TGG + chr8.4:18157149-18157168 None:intergenic 55.0%
AGTTGTGGGACAAGACCAGG+CGG - chr8.4:18158432-18158451 MS.gene063483:intron 55.0%
CAGCAACAGCATTAACCGCC+TGG + chr8.4:18158450-18158469 None:intergenic 55.0%
CTACCAGGCACTTCATCTGG+TGG + chr8.4:18156480-18156499 None:intergenic 55.0%
GAGGTTGTTAGCCGATGGAC+TGG - chr8.4:18158337-18158356 MS.gene063483:CDS 55.0%
GGCGGTTAATGCTGTTGCTG+AGG - chr8.4:18158450-18158469 MS.gene063483:intron 55.0%
GGTATACCGGTGACTAGGCT+TGG - chr8.4:18158358-18158377 MS.gene063483:CDS 55.0%
GTGCTACCAGGCACTTCATC+TGG + chr8.4:18156483-18156502 None:intergenic 55.0%
TAGCCGAGGTTGTTAGCCGA+TGG - chr8.4:18158332-18158351 MS.gene063483:CDS 55.0%
TTGCACTACAGGAGGCAGAG+AGG - chr8.4:18158167-18158186 MS.gene063483:intron 55.0%
! ACCGCGGTTTTTCCAACACC+AGG + chr8.4:18156870-18156889 None:intergenic 55.0%
! AGGGCGTCATCTACCTGACA+AGG - chr8.4:18157511-18157530 MS.gene063483:CDS 55.0%
! CTTGGGGCTGGTAGAACAGA+AGG - chr8.4:18157095-18157114 MS.gene063483:CDS 55.0%
! GCCTGGTGTTGGAAAAACCG+CGG - chr8.4:18156866-18156885 MS.gene063483:CDS 55.0%
! GGACTGGTATACCGGTGACT+AGG - chr8.4:18158353-18158372 MS.gene063483:CDS 55.0%
! GGTGCTGAGCATCTCTTGAG+TGG - chr8.4:18159022-18159041 MS.gene063483:CDS 55.0%
! TGACGGACAAGGCAGAACTG+TGG - chr8.4:18158961-18158980 MS.gene063483:CDS 55.0%
!! GATATGGGAGCACTGGTTGC+TGG - chr8.4:18156966-18156985 MS.gene063483:CDS 55.0%
!! TTGATAAGCGCGGTGCTACC+AGG + chr8.4:18156495-18156514 None:intergenic 55.0%
AGAGCTGCGGACCTGCGATA+TGG - chr8.4:18158205-18158224 MS.gene063483:intron 60.0%
ATATCGCAGGTCCGCAGCTC+TGG + chr8.4:18158206-18158225 None:intergenic 60.0%
CACTACAGGAGGCAGAGAGG+CGG - chr8.4:18158170-18158189 MS.gene063483:intron 60.0%
CCAGGCACTTCATCTGGTGG+AGG + chr8.4:18156477-18156496 None:intergenic 60.0%
GCTAGCCGTCTTGCTGAGAG+AGG - chr8.4:18159211-18159230 MS.gene063483:CDS 60.0%
TCGATCGCGAGCAGCTTGCA+TGG + chr8.4:18159065-18159084 None:intergenic 60.0%
TGCTCGCGATCGAGTGATGC+AGG - chr8.4:18159072-18159091 MS.gene063483:CDS 60.0%
TGGACCGGACCAAATAGCCG+AGG - chr8.4:18158318-18158337 MS.gene063483:CDS 60.0%
! CCTCCACCAGATGAAGTGCC+TGG - chr8.4:18156474-18156493 MS.gene063483:CDS 60.0%
! GGGAGGTTGACTGACGGACA+AGG - chr8.4:18158950-18158969 MS.gene063483:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 18156243 18159703 18156243 ID=MS.gene063483
chr8.4 mRNA 18156243 18159703 18156243 ID=MS.gene063483.t1;Parent=MS.gene063483
chr8.4 exon 18158554 18159703 18158554 ID=MS.gene063483.t1.exon1;Parent=MS.gene063483.t1
chr8.4 CDS 18158554 18159703 18158554 ID=cds.MS.gene063483.t1;Parent=MS.gene063483.t1
chr8.4 exon 18158252 18158433 18158252 ID=MS.gene063483.t1.exon2;Parent=MS.gene063483.t1
chr8.4 CDS 18158252 18158433 18158252 ID=cds.MS.gene063483.t1;Parent=MS.gene063483.t1
chr8.4 exon 18157266 18157900 18157266 ID=MS.gene063483.t1.exon3;Parent=MS.gene063483.t1
chr8.4 CDS 18157266 18157900 18157266 ID=cds.MS.gene063483.t1;Parent=MS.gene063483.t1
chr8.4 exon 18156652 18157129 18156652 ID=MS.gene063483.t1.exon4;Parent=MS.gene063483.t1
chr8.4 CDS 18156652 18157129 18156652 ID=cds.MS.gene063483.t1;Parent=MS.gene063483.t1
chr8.4 exon 18156243 18156536 18156243 ID=MS.gene063483.t1.exon5;Parent=MS.gene063483.t1
chr8.4 CDS 18156243 18156536 18156243 ID=cds.MS.gene063483.t1;Parent=MS.gene063483.t1
Gene Sequence

>MS.gene063483

ATGAATCCAGAGAAATTTACTCACAAAACAAACGAAGCACTTGCTGGTGCACACGAGCTAGCAATGACTTCAGGTCATGCACAAATCACTCCCTTACACCTTGCATCAATTCTAGTTTCTGATCCTAACGGTATTTTCTTCCAAGCAATTTCAAACGTTGCTGGTGAAGAATCAGCACGTGCTGTTGAACGTGTTTTGAAACAAGCATTAAAGAAACTTCCATCTCAATCACCTCCACCAGATGAAGTGCCTGGTAGCACCGCGCTTATCAAAGCGATTCGTAGAGCACAAGCTGCACAGAAATCACGTGGTGATACTCATTTAGCTGTTGATCAGTTAATCTTGGGAATTCTCGAGGATTCTCAGATTGGTGATTTGTTTAAAGAAGCCGGTGTTGCTGTTTCTAGGGTTAAAACTGAGGTTGAAAAGCTGAGGGGTAAAGATGGGAAAAAGGTTGAAAGTGCTTCTGGTGATACGAATTTTCAAGCATTGAAGACTTATGGAAGAGACTTGGTTGAACAAGCAGGGAAGCTTGATCCTGTTATTGGACGCGACGAAGAGATTCGAAGAGTTGTGAGGATTTTGTCAAGAAGGACTAAGAACAATCCTGTTCTTATTGGTGAGCCTGGTGTTGGAAAAACCGCGGTTGTTGAAGGGTTGGCTCAGAGGATTGTTAGAGGTGATGTACCTAGCAATCTTGCTGATGTTAGGTTAATTGCTTTGGATATGGGAGCACTGGTTGCTGGTGCGAAGTATAGGGGTGAATTTGAGGAGAGGTTGAAGGCTGTTTTGAAAGAAGTTGAAGAAGCTGAAGGGAAGGTTATTCTTTTCATTGATGAGATTCATCTTGTTCTTGGGGCTGGTAGAACAGAAGGATCGATGGATGCTGCTAATCTTTTTAAACCAATGCTTGCTCGTGGACAGCTTCGATGTATTGGTGCTACAACGCTTGAGGAGTATAGGAAGTATGTTGAAAAAGATGCAGCATTTGAAAGAAGGTTTCAACAGGTTTATGTGGCTGAACCTAGTGTTCCGGATACAATTAGCATTCTTCGTGGATTAAAAGAGAGATATGAGGGTCATCATGGTGTTCGAATTCAAGATCGTGCGATTGTAGTTGCAGCTCAATTGTCTAGTCGGTACATAACCGGTATGTTCTTTATATTCTCTCTTCATGTTTGTGTGTTTTTGTTATTGATTTTTTATGCATTGAATGTGATGATTTCACTTGTGTTTATGCTAACATGGTATGTGTTCTGTATGTGTTAAGGGCGTCATCTACCTGACAAGGCGATTGATTTAGTTGATGAGGCATGTGCTAATGTGCGAGTTCAACTTGATAGTCAGCCTGAGGAAATTGACAATCTTGAAAGGAAGAGAATGCAACTAGAAGTTGAACTTCATGCTCTAGAGAAAGAGAAGGACAAAGCTAGCAAAGCCCGTCTTGTAGATGTAAGTATGGATGTTAACTTTTTCTTTTAATCAATGATCTCTGAATTCAAATATGCCATGATAGCATTAATTTTGATGATATATTTGACAATGAAGATATATTTATTCATTGACTGATAAATACCATATTTAGTCAAATTTTATTCATTCAAGTAGATTTAAGCAGATGTACATTAGTTTAGTTTAATTTCATTTGTTCTAAATTAACTTCATTTTTGTAATACTAAGTACATAACTATATTGTGGTGGTGCTGCAAATGTGGGATAATGGTTTAAATTGTGTATCAGTTTTCATTTTATATTGTGTATTTGTAGTACTTCAATGATTCTGATAGTTGATGTTATTCGCAGGTACGGAAAGAACTCGATGACTTGAGAGACAAGCTTCAACCTCTGAAGATGAAGTATAGTAAAGAGAAAGAGAGGATTGATGAGATTCGAAGGCTGAAGCAGAAACGTGAAGAGCTCATCTTTGCACTACAGGAGGCAGAGAGGCGGTATGATCTAGCCAGAGCTGCGGACCTGCGATATGGTGCAATTGAAGAGGTGGAAACTGCAATTAAAAATCTTGAAGGTAGCACTGATGGGAACACTGATGACAACTTAATGTTGACTGAAACAGTTGGACCGGACCAAATAGCCGAGGTTGTTAGCCGATGGACTGGTATACCGGTGACTAGGCTTGGCCAAAATGAGAAAGAAAGGTTGGTTGGACTTGGTGACAGACTGCACACTAGAGTTGTGGGACAAGACCAGGCGGTTAATGCTGTTGCTGAGGCTGTATTGAGATCAAGAGCTGGTTTAGGAAGACCTCAACAACCAACTGGTTCCTTCTTATTCCTTGGTCCAACTGGTGTTGGTAAAACTGAGCTTGCAAAGGCTCTTGCAGAGCAGCTATTTGATGATGAAAATCAGTTGGTGAGAATTGACATGTCGGAGTACATGGAACAACACTCTGTATCAAGATTGATTGGTGCACCACCAGGGTAAGTTATTAGATTCGTACCTGAATATTATTTAGACTAATAGCCTAAACCAGTAGCTAGAGTTAAATATGAATTAATAAACATTCTAGTATGTGGTCTATGAGAACAAGTATCTCATTTTGCATTGAATTTTCAGGTATGTTGGACATGAAGAAGGGGGTCAATTAACAGAAGCTGTAAGGAGAAGGCCATACAGTGTTGTACTTTTTGATGAAGTTGAGAAAGCACACACATCTGTATTCAACACTCTTCTCCAAGTCTTGGATGATGGGAGGTTGACTGACGGACAAGGCAGAACTGTGGACTTTAGGAACACTGTGATCATCATGACCTCTAACCTTGGTGCTGAGCATCTCTTGAGTGGACTTTCAGGAAAATGTACCATGCAAGCTGCTCGCGATCGAGTGATGCAGGAAGTAAGAAGGCATTTCAGGCCAGAATTGTTGAACCGACTGGACGAAGTTGTTGTATTTGATCCTCTATCACATGAGCAATTGAGAAAGGTTGCAAGGTTGCAAATGAAGGATGTGGCTAGCCGTCTTGCTGAGAGAGGAATTGCATTGGCAGTAACAGATGCGGCTCTAGATTATATTCTTGCTGAGAGCTATGATCCAGTAAGTGTTATTATATTATAGTATCATCTTATTCTTTAGGATATAGAATATTTCAGACAAAATGGTAGTGGCTAATAATACTAACTGGTTTTTGTTATTGTTGTTTCTTGTGTAGGTGTATGGTGCTAGACCAATTAGAAGGTGGCTAGAGAGGAAGGTTGTGACAGAGCTGTCTAGGATGCTCATAAGAGAAGAAATTGATGAAAATACAACGGTTTACATTGATGCTGGTCCTAAGGGAAGTGATTTAGCATACCGTGTAGAAAAGAATGGAGGGATTGTTAATGCTGAAACTGGGGTGAAGTCTGATATTCTGATTCAGATTCCAAATGGACCGAAAAGTGATGCTGTTCAGGCTGTCAAGAAAATGAGAATTGAGGAAGTTGATGATGATGAAATGGAAGAGTGA

Protein sequence

>MS.gene063483.t1

MNPEKFTHKTNEALAGAHELAMTSGHAQITPLHLASILVSDPNGIFFQAISNVAGEESARAVERVLKQALKKLPSQSPPPDEVPGSTALIKAIRRAQAAQKSRGDTHLAVDQLILGILEDSQIGDLFKEAGVAVSRVKTEVEKLRGKDGKKVESASGDTNFQALKTYGRDLVEQAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKERYEGHHGVRIQDRAIVVAAQLSSRYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLEVELHALEKEKDKASKARLVDVRKELDDLRDKLQPLKMKYSKEKERIDEIRRLKQKREELIFALQEAERRYDLARAADLRYGAIEEVETAIKNLEGSTDGNTDDNLMLTETVGPDQIAEVVSRWTGIPVTRLGQNEKERLVGLGDRLHTRVVGQDQAVNAVAEAVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENQLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHTSVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGLSGKCTMQAARDRVMQEVRRHFRPELLNRLDEVVVFDPLSHEQLRKVARLQMKDVASRLAERGIALAVTDAALDYILAESYDPVYGARPIRRWLERKVVTELSRMLIREEIDENTTVYIDAGPKGSDLAYRVEKNGGIVNAETGVKSDILIQIPNGPKSDAVQAVKKMRIEEVDDDEMEE