AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene35394


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35394.t1 MTR_2g086160 99.315 438 3 0 1 438 1 438 0.0 900
MS.gene35394.t1 MTR_4g053350 91.096 438 34 1 1 438 1 433 0.0 814
MS.gene35394.t1 MTR_4g053350 91.096 438 34 1 1 438 1 433 0.0 813
MS.gene35394.t1 MTR_2g086160 99.133 346 3 0 1 346 1 346 0.0 708
MS.gene35394.t1 MTR_4g096870 48.052 308 137 5 71 356 37 343 1.33e-89 278
MS.gene35394.t1 MTR_4g011810 41.509 371 168 7 76 435 195 527 3.85e-89 280
MS.gene35394.t1 MTR_7g075520 42.598 331 154 5 106 435 189 484 5.04e-78 250
MS.gene35394.t1 MTR_6g023875 40.476 336 166 4 106 435 351 658 1.77e-74 246
MS.gene35394.t1 MTR_6g023855 41.593 339 159 8 106 435 215 523 3.73e-73 239
MS.gene35394.t1 MTR_2g036350 71.141 149 33 2 1 149 1 139 7.79e-65 209
MS.gene35394.t1 MTR_2g036350 76.378 127 25 1 5 131 125 246 1.39e-55 186
MS.gene35394.t1 MTR_6g023865 36.467 351 171 7 106 434 127 447 1.54e-61 207
MS.gene35394.t1 MTR_1g099480 36.364 330 184 7 42 356 375 693 1.14e-57 202
MS.gene35394.t1 MTR_6g033740 46.725 229 114 5 132 356 500 724 3.24e-57 202
MS.gene35394.t1 MTR_8g099065 43.860 228 125 3 131 356 533 759 8.73e-57 201
MS.gene35394.t1 MTR_8g046940 76.378 127 25 1 5 131 49 170 2.60e-56 185
MS.gene35394.t1 MTR_8g046940 52.778 72 24 2 78 149 2 63 1.23e-12 67.0
MS.gene35394.t1 MTR_5g009840 38.926 298 171 6 65 356 449 741 1.81e-55 197
MS.gene35394.t1 MTR_1g088730 45.662 219 114 4 132 346 932 1149 5.09e-54 194
MS.gene35394.t1 MTR_1g101870 43.119 218 118 4 132 345 505 720 1.43e-53 192
MS.gene35394.t1 MTR_1g101870 43.119 218 118 4 132 345 557 772 1.85e-53 192
MS.gene35394.t1 MTR_1g099470 41.667 228 127 4 132 356 434 658 2.95e-52 187
MS.gene35394.t1 MTR_3g089100 44.292 219 117 4 132 346 931 1148 3.26e-52 189
MS.gene35394.t1 MTR_3g089100 44.292 219 117 4 132 346 897 1114 3.46e-52 189
MS.gene35394.t1 MTR_3g089100 44.292 219 117 4 132 346 902 1119 3.47e-52 189
MS.gene35394.t1 MTR_1g088750 44.292 219 117 4 132 346 889 1106 4.50e-52 189
MS.gene35394.t1 MTR_1g088750 44.292 219 117 4 132 346 938 1155 4.91e-52 189
MS.gene35394.t1 MTR_3g092080 40.343 233 132 5 131 359 83 312 1.25e-49 172
MS.gene35394.t1 MTR_3g092070 40.693 231 130 5 131 357 80 307 2.16e-49 171
MS.gene35394.t1 MTR_3g092080 40.343 233 132 5 131 359 83 312 2.38e-49 172
MS.gene35394.t1 MTR_3g092070 40.870 230 129 5 131 356 80 306 3.09e-49 172
MS.gene35394.t1 MTR_1g099480 38.290 269 144 5 42 296 375 635 3.13e-49 177
MS.gene35394.t1 MTR_1g063380 42.920 226 121 6 126 345 472 695 9.42e-49 178
MS.gene35394.t1 MTR_1g063380 37.607 234 138 6 132 361 205 434 1.82e-41 157
MS.gene35394.t1 MTR_7g101870 42.478 226 122 6 126 345 473 696 1.04e-48 178
MS.gene35394.t1 MTR_7g101870 37.143 245 142 7 125 361 195 435 5.03e-41 155
MS.gene35394.t1 MTR_6g023845 33.544 316 154 7 121 435 105 365 1.85e-48 170
MS.gene35394.t1 MTR_2g095210 42.478 226 122 6 126 345 400 623 2.25e-48 176
MS.gene35394.t1 MTR_2g095210 39.759 83 47 2 132 212 207 288 9.23e-12 67.8
MS.gene35394.t1 MTR_8g099065 49.405 168 83 2 131 296 533 700 1.62e-46 171
MS.gene35394.t1 MTR_7g088830 39.300 257 148 6 110 360 634 888 3.46e-46 171
MS.gene35394.t1 MTR_7g088830 39.683 189 101 6 156 342 425 602 1.92e-29 122
MS.gene35394.t1 MTR_7g089040 38.911 257 149 6 110 360 661 915 4.04e-45 168
MS.gene35394.t1 MTR_7g089040 38.119 202 113 4 169 360 422 621 7.53e-33 132
MS.gene35394.t1 MTR_3g117230 39.827 231 124 10 125 345 131 356 1.82e-43 157
MS.gene35394.t1 MTR_3g112260 39.827 231 124 10 125 345 128 353 3.56e-43 156
MS.gene35394.t1 MTR_4g094270 39.167 240 133 8 121 351 145 380 3.57e-43 157
MS.gene35394.t1 MTR_4g074920 41.048 229 111 6 132 356 669 877 6.12e-43 162
MS.gene35394.t1 MTR_7g088850 37.344 241 144 5 121 356 271 509 1.63e-42 157
MS.gene35394.t1 MTR_7g088850 28.571 224 145 7 145 360 30 246 1.75e-19 91.3
MS.gene35394.t1 MTR_7g088980 38.783 263 150 7 110 364 112 371 2.72e-42 154
MS.gene35394.t1 MTR_7g088980 38.783 263 150 7 110 364 194 453 1.62e-41 154
MS.gene35394.t1 MTR_7g088980 31.013 158 93 6 206 355 24 173 1.46e-12 69.7
MS.gene35394.t1 MTR_7g088980 38.783 263 150 7 110 364 262 521 1.83e-41 155
MS.gene35394.t1 MTR_7g088980 31.897 232 133 8 137 355 22 241 5.70e-25 107
MS.gene35394.t1 MTR_3g062510 37.975 237 138 6 128 358 155 388 2.24e-41 152
MS.gene35394.t1 MTR_7g088980 38.783 263 150 7 110 364 288 547 4.12e-41 154
MS.gene35394.t1 MTR_7g088980 33.333 195 114 6 169 355 81 267 9.37e-23 101
MS.gene35394.t1 MTR_4g094662 37.895 285 161 9 120 396 215 491 7.39e-41 154
MS.gene35394.t1 MTR_4g033235 37.555 229 133 7 126 347 162 387 1.81e-40 149
MS.gene35394.t1 MTR_1g083330 37.555 229 133 7 126 347 161 386 1.87e-40 149
MS.gene35394.t1 MTR_2g438140 43.049 223 115 8 129 343 221 439 2.33e-40 153
MS.gene35394.t1 MTR_2g438140 43.049 223 115 8 129 343 281 499 4.15e-40 152
MS.gene35394.t1 MTR_7g010800 40.889 225 117 9 129 343 201 419 5.99e-40 152
MS.gene35394.t1 MTR_2g095320 38.961 231 121 7 122 345 408 625 7.31e-40 152
MS.gene35394.t1 MTR_2g095320 35.470 234 139 6 132 361 153 378 1.35e-37 145
MS.gene35394.t1 MTR_7g089290 36.481 233 130 4 130 351 637 862 1.79e-39 151
MS.gene35394.t1 MTR_7g089290 36.481 233 130 4 130 351 665 890 2.33e-39 151
MS.gene35394.t1 MTR_7g099640 34.328 268 152 9 126 372 181 445 5.93e-39 146
MS.gene35394.t1 MTR_1g069105 33.955 268 153 9 126 372 182 446 9.23e-39 145
MS.gene35394.t1 MTR_7g099640 35.081 248 150 7 126 365 181 425 4.17e-38 143
MS.gene35394.t1 MTR_7g096060 41.850 227 118 8 129 345 237 459 4.53e-38 147
MS.gene35394.t1 MTR_7g078570 42.478 226 112 9 132 345 192 411 6.04e-38 146
MS.gene35394.t1 MTR_4g064350 42.291 227 117 8 129 345 317 539 9.31e-38 146
MS.gene35394.t1 MTR_3g062510 40.722 194 107 5 128 315 155 346 1.16e-37 141
MS.gene35394.t1 MTR_6g059690 41.964 224 116 8 132 345 197 416 3.01e-37 144
MS.gene35394.t1 MTR_2g007010 36.842 228 134 7 130 351 526 749 1.68e-36 142
MS.gene35394.t1 MTR_2g007010 34.562 217 131 6 134 343 240 452 1.09e-29 122
MS.gene35394.t1 MTR_3g115110 41.014 217 118 7 132 342 249 461 4.16e-36 141
MS.gene35394.t1 MTR_1g095660 35.714 252 136 10 112 345 98 341 2.07e-35 135
MS.gene35394.t1 MTR_1g069105 38.265 196 113 5 126 315 182 375 2.16e-35 135
MS.gene35394.t1 MTR_6g016600 36.111 252 141 9 122 361 304 547 3.26e-35 138
MS.gene35394.t1 MTR_1g028390 38.793 232 128 8 121 346 318 541 4.24e-35 138
MS.gene35394.t1 MTR_3g104480 36.818 220 130 7 131 346 221 435 8.26e-35 137
MS.gene35394.t1 MTR_0376s0020 41.256 223 118 8 132 345 1 219 1.51e-34 135
MS.gene35394.t1 MTR_5g069780 38.136 236 135 5 131 358 312 544 2.21e-34 136
MS.gene35394.t1 MTR_2g101290 39.474 228 118 7 131 347 414 632 3.19e-34 135
MS.gene35394.t1 MTR_4g067100 35.470 234 141 5 131 356 379 610 4.17e-34 136
MS.gene35394.t1 MTR_4g067100 35.470 234 141 5 131 356 379 610 4.20e-34 136
MS.gene35394.t1 MTR_5g075340 36.818 220 130 7 131 346 228 442 4.27e-34 135
MS.gene35394.t1 MTR_2g101290 39.474 228 118 7 131 347 414 632 6.30e-34 135
MS.gene35394.t1 MTR_3g104470 36.036 222 129 8 131 346 223 437 8.86e-34 134
MS.gene35394.t1 MTR_3g023900 29.904 311 191 8 130 434 529 818 1.42e-33 134
MS.gene35394.t1 MTR_3g023900 31.667 300 176 10 134 411 236 528 3.34e-31 127
MS.gene35394.t1 MTR_3g462930 38.912 239 135 8 131 361 303 538 5.50e-33 132
MS.gene35394.t1 MTR_2g078630 34.978 223 134 7 134 347 596 816 5.82e-33 132
MS.gene35394.t1 MTR_2g078630 34.978 223 134 7 134 347 68 288 6.19e-33 132
MS.gene35394.t1 MTR_3g023890 32.982 285 163 10 166 434 128 400 3.84e-32 129
MS.gene35394.t1 MTR_3g023890 38.172 186 110 4 130 312 383 566 4.86e-31 126
MS.gene35394.t1 MTR_2g024440 34.167 240 139 8 120 347 202 434 1.54e-30 123
MS.gene35394.t1 MTR_2g024440 34.167 240 139 8 120 347 285 517 1.66e-30 124
MS.gene35394.t1 MTR_2g024440 34.167 240 139 8 120 347 284 516 1.78e-30 124
MS.gene35394.t1 MTR_8g023550 34.694 245 127 10 112 345 145 367 2.85e-30 121
MS.gene35394.t1 MTR_3g096000 36.220 254 152 5 116 361 282 533 2.52e-28 118
MS.gene35394.t1 MTR_3g104490 34.978 223 118 7 131 351 206 403 1.87e-27 115
MS.gene35394.t1 MTR_8g099605 31.321 265 163 8 132 381 163 423 3.73e-27 114
MS.gene35394.t1 MTR_8g099605 31.321 265 163 8 132 381 404 664 4.53e-27 114
MS.gene35394.t1 MTR_8g469460 33.766 231 115 7 131 359 206 400 6.76e-27 114
MS.gene35394.t1 MTR_5g075360 32.273 220 140 7 131 346 15 229 5.11e-26 110
MS.gene35394.t1 MTR_5g075360 32.273 220 140 7 131 346 65 279 1.31e-25 109
MS.gene35394.t1 MTR_5g075360 32.273 220 140 7 131 346 191 405 2.08e-25 109
MS.gene35394.t1 MTR_5g075360 32.273 220 140 7 131 346 241 455 3.14e-25 108
MS.gene35394.t1 MTR_7g088980 31.897 232 133 8 137 355 22 241 4.51e-25 107
MS.gene35394.t1 MTR_7g088980 31.939 263 125 8 110 364 262 478 1.46e-22 100
MS.gene35394.t1 MTR_7g088980 33.333 195 114 6 169 355 81 267 6.76e-23 101
MS.gene35394.t1 MTR_7g088980 31.939 263 125 8 110 364 288 504 2.50e-22 99.8
MS.gene35394.t1 MTR_5g074850 31.416 226 136 9 131 343 497 716 1.43e-20 95.1
MS.gene35394.t1 MTR_8g056860 31.944 216 129 7 159 362 497 706 5.33e-20 93.6
MS.gene35394.t1 MTR_4g088885 30.769 208 126 7 157 347 247 453 2.68e-19 91.3
MS.gene35394.t1 MTR_1g044600 38.776 147 78 6 208 345 204 347 3.93e-19 90.1
MS.gene35394.t1 MTR_1g080430 30.806 211 132 8 108 311 657 860 8.18e-18 86.7
MS.gene35394.t1 MTR_1g080430 30.806 211 132 8 108 311 657 860 8.33e-18 86.7
MS.gene35394.t1 MTR_3g076930 34.161 161 88 4 169 312 197 356 3.05e-17 84.0
MS.gene35394.t1 MTR_5g020530 26.641 259 163 5 114 349 334 588 4.49e-17 84.0
MS.gene35394.t1 MTR_4g083460 27.711 249 118 7 134 361 839 1046 1.59e-16 82.8
MS.gene35394.t1 MTR_4g077880 27.404 208 122 5 167 349 368 571 2.23e-14 75.5
MS.gene35394.t1 MTR_6g005760 27.053 207 123 5 167 349 234 436 2.29e-14 75.1
MS.gene35394.t1 MTR_6g005760 27.053 207 123 5 167 349 362 564 2.49e-14 75.5
MS.gene35394.t1 MTR_4g112600 41.026 78 44 2 136 211 4 81 3.71e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35394.t1 AT2G27600 90.183 438 40 1 1 438 1 435 0.0 806
MS.gene35394.t1 AT1G80350 41.620 358 174 6 87 435 190 521 7.27e-90 282
MS.gene35394.t1 AT2G45500 41.737 357 171 5 80 435 32 352 5.37e-85 264
MS.gene35394.t1 AT2G45500 41.737 357 171 5 80 435 32 352 5.37e-85 264
MS.gene35394.t1 AT2G34560 51.200 250 119 3 110 357 78 326 3.99e-84 263
MS.gene35394.t1 AT2G34560 51.200 250 119 3 110 357 87 335 6.25e-84 263
MS.gene35394.t1 AT2G45500 41.737 357 171 5 80 435 165 485 3.28e-83 264
MS.gene35394.t1 AT2G45500 41.737 357 171 5 80 435 169 489 4.20e-83 264
MS.gene35394.t1 AT2G45500 41.737 357 171 5 80 435 175 495 4.72e-83 264
MS.gene35394.t1 AT3G27120 39.583 336 169 4 106 435 369 676 1.90e-72 241
MS.gene35394.t1 AT1G08270 75.758 132 22 1 33 164 1 122 1.11e-60 194
MS.gene35394.t1 AT1G08270 74.242 132 24 1 33 164 1 122 2.37e-59 190
MS.gene35394.t1 AT1G50140 47.826 230 112 5 132 356 689 915 3.09e-59 209
MS.gene35394.t1 AT1G50140 47.826 230 112 5 132 356 689 915 3.09e-59 209
MS.gene35394.t1 AT1G50140 47.826 230 112 5 132 356 711 937 3.66e-59 209
MS.gene35394.t1 AT1G50140 47.826 230 112 5 132 356 711 937 3.66e-59 209
MS.gene35394.t1 AT1G50140 47.826 230 112 5 132 356 711 937 3.66e-59 209
MS.gene35394.t1 AT3G19740 47.162 229 115 4 132 356 701 927 1.41e-58 207
MS.gene35394.t1 AT1G64110 44.635 233 122 4 128 356 509 738 4.72e-57 201
MS.gene35394.t1 AT1G64110 44.635 233 122 4 128 356 512 741 4.99e-57 201
MS.gene35394.t1 AT1G64110 44.635 233 122 4 128 356 512 741 4.99e-57 201
MS.gene35394.t1 AT1G64110 44.635 233 122 4 128 356 514 743 5.78e-57 201
MS.gene35394.t1 AT1G64110 44.635 233 122 4 128 356 514 743 5.78e-57 201
MS.gene35394.t1 AT4G28000 43.860 228 122 4 132 356 517 741 7.65e-56 198
MS.gene35394.t1 AT4G28000 43.860 228 122 4 132 356 517 741 9.40e-56 198
MS.gene35394.t1 AT4G28000 43.860 228 122 4 132 356 515 739 9.52e-56 198
MS.gene35394.t1 AT5G52882 43.860 228 122 4 132 356 514 738 2.14e-54 194
MS.gene35394.t1 AT5G53540 38.356 292 143 8 131 418 83 341 1.51e-53 184
MS.gene35394.t1 AT4G02480 44.105 229 122 5 132 356 960 1186 3.04e-53 192
MS.gene35394.t1 AT4G24860 43.966 232 121 5 121 346 779 1007 7.88e-53 191
MS.gene35394.t1 AT4G24860 43.966 232 121 5 121 346 802 1030 8.47e-53 191
MS.gene35394.t1 AT4G24860 43.966 232 121 5 121 346 804 1032 9.60e-53 191
MS.gene35394.t1 AT4G24860 43.966 232 121 5 121 346 806 1034 1.03e-52 191
MS.gene35394.t1 AT1G02890 45.000 220 114 5 132 346 941 1158 4.06e-52 189
MS.gene35394.t1 AT4G27680 38.014 292 144 8 131 418 80 338 9.95e-52 179
MS.gene35394.t1 AT3G53230 43.363 226 120 6 126 345 472 695 1.21e-49 181
MS.gene35394.t1 AT3G53230 37.179 234 139 6 132 361 205 434 1.05e-40 155
MS.gene35394.t1 AT5G03340 42.920 226 121 6 126 345 471 694 1.23e-49 181
MS.gene35394.t1 AT5G03340 37.179 234 139 6 132 361 204 433 8.03e-41 155
MS.gene35394.t1 AT3G09840 42.731 227 121 6 126 345 471 695 1.94e-47 174
MS.gene35394.t1 AT3G09840 37.021 235 140 6 131 361 203 433 5.21e-41 155
MS.gene35394.t1 AT3G56690 41.700 247 132 7 110 348 697 939 4.49e-45 168
MS.gene35394.t1 AT3G56690 36.224 196 121 3 166 359 416 609 4.57e-34 135
MS.gene35394.t1 AT5G43010 38.683 243 137 10 125 359 128 366 1.21e-44 160
MS.gene35394.t1 AT1G45000 38.776 245 134 11 125 359 128 366 7.16e-44 158
MS.gene35394.t1 AT2G03670 41.880 234 118 6 120 342 271 497 3.60e-43 160
MS.gene35394.t1 AT2G03670 31.707 246 151 8 131 363 15 256 2.56e-28 118
MS.gene35394.t1 AT5G19990 39.167 240 133 8 121 351 89 324 7.54e-43 154
MS.gene35394.t1 AT5G19990 39.167 240 133 8 121 351 147 382 1.41e-42 155
MS.gene35394.t1 AT5G19990 39.167 240 133 8 121 351 147 382 1.41e-42 155
MS.gene35394.t1 AT5G20000 39.167 240 133 8 121 351 147 382 1.64e-42 155
MS.gene35394.t1 AT1G06430 40.711 253 138 8 117 361 200 448 5.28e-42 158
MS.gene35394.t1 AT1G06430 40.711 253 138 8 117 361 200 448 5.28e-42 158
MS.gene35394.t1 AT1G06430 40.711 253 138 8 117 361 200 448 5.28e-42 158
MS.gene35394.t1 AT2G30950 42.553 235 123 8 117 343 207 437 9.61e-42 157
MS.gene35394.t1 AT2G30950 42.553 235 123 8 117 343 207 437 9.61e-42 157
MS.gene35394.t1 AT2G30950 42.553 235 123 8 117 343 207 437 9.61e-42 157
MS.gene35394.t1 AT2G30950 42.553 235 123 8 117 343 211 441 1.03e-41 157
MS.gene35394.t1 AT5G58290 38.235 238 136 7 128 358 148 381 3.02e-41 151
MS.gene35394.t1 AT1G53750 38.211 246 132 9 112 345 145 382 3.37e-41 152
MS.gene35394.t1 AT3G05530 37.991 229 132 7 126 347 162 387 5.46e-41 151
MS.gene35394.t1 AT1G09100 37.719 228 134 6 126 347 161 386 2.33e-40 149
MS.gene35394.t1 AT3G02450 38.430 242 134 8 128 361 327 561 3.39e-40 152
MS.gene35394.t1 AT4G29040 34.328 268 152 9 126 372 179 443 1.68e-39 147
MS.gene35394.t1 AT2G20140 34.328 268 152 9 126 372 179 443 2.90e-39 147
MS.gene35394.t1 AT1G03000 35.622 233 142 5 130 356 653 883 4.70e-39 150
MS.gene35394.t1 AT1G62130 38.182 220 117 7 132 346 743 948 5.10e-39 150
MS.gene35394.t1 AT1G62130 38.182 220 117 7 132 346 750 955 6.29e-39 150
MS.gene35394.t1 AT1G07510 40.984 244 130 8 118 351 310 549 2.33e-38 148
MS.gene35394.t1 AT1G53780 36.290 248 138 9 112 347 316 555 7.13e-38 145
MS.gene35394.t1 AT1G53780 36.290 248 138 9 112 347 317 556 7.78e-38 145
MS.gene35394.t1 AT1G53780 36.290 248 138 9 112 347 317 556 7.78e-38 145
MS.gene35394.t1 AT1G53780 36.290 248 138 9 112 347 338 577 1.06e-37 145
MS.gene35394.t1 AT5G42270 42.396 217 115 7 132 342 247 459 1.63e-37 145
MS.gene35394.t1 AT5G15250 36.508 252 144 9 120 361 207 452 3.64e-37 144
MS.gene35394.t1 AT2G29080 42.373 236 125 8 118 345 305 537 2.63e-36 142
MS.gene35394.t1 AT1G50250 40.991 222 111 8 132 342 259 471 3.78e-36 141
MS.gene35394.t1 AT1G02890 37.727 220 102 6 132 346 941 1130 1.97e-35 140
MS.gene35394.t1 AT3G15120 34.802 227 137 6 134 351 718 942 2.32e-35 140
MS.gene35394.t1 AT3G15120 34.802 227 137 6 134 351 728 952 2.60e-35 139
MS.gene35394.t1 AT5G53170 38.793 232 128 8 121 346 348 571 1.66e-34 137
MS.gene35394.t1 AT2G26140 36.364 220 131 7 131 346 223 437 1.98e-34 136
MS.gene35394.t1 AT3G16290 39.474 228 118 7 131 347 406 624 9.63e-34 134
MS.gene35394.t1 AT3G47060 34.296 277 147 6 91 358 303 553 1.40e-33 134
MS.gene35394.t1 AT1G05910 35.841 226 134 6 131 347 377 600 1.51e-33 134
MS.gene35394.t1 AT5G15250 33.818 275 143 10 120 361 207 475 2.26e-33 132
MS.gene35394.t1 AT5G58870 36.842 247 146 6 131 368 325 570 4.70e-33 132
MS.gene35394.t1 AT3G01610 36.957 230 135 7 130 354 523 747 1.37e-32 131
MS.gene35394.t1 AT3G01610 36.607 224 122 6 134 342 232 450 4.52e-31 127
MS.gene35394.t1 AT3G01610 36.957 230 135 7 130 354 523 747 1.42e-32 131
MS.gene35394.t1 AT3G01610 36.607 224 122 6 134 342 232 450 5.10e-31 126
MS.gene35394.t1 AT5G08470 34.649 228 139 6 134 356 843 1065 6.64e-31 126
MS.gene35394.t1 AT5G08470 34.649 228 139 6 134 356 834 1056 7.75e-31 126
MS.gene35394.t1 AT4G04180 34.956 226 128 8 132 345 316 534 6.81e-30 122
MS.gene35394.t1 AT4G04180 34.956 226 128 8 132 345 311 529 7.23e-30 122
MS.gene35394.t1 AT2G03670 31.707 246 151 8 131 363 15 256 6.82e-29 118
MS.gene35394.t1 AT2G03670 43.333 150 81 2 121 266 272 421 1.23e-26 111
MS.gene35394.t1 AT5G64580 35.039 254 155 4 116 361 299 550 3.56e-28 118
MS.gene35394.t1 AT1G45000 40.000 145 83 4 125 265 128 272 2.43e-27 112
MS.gene35394.t1 AT4G23940 33.061 245 146 7 132 362 427 667 4.87e-27 114
MS.gene35394.t1 AT1G79560 35.437 206 115 7 169 362 527 726 9.06e-24 105
MS.gene35394.t1 AT1G79560 35.437 206 115 7 169 362 527 726 9.10e-24 105
MS.gene35394.t1 AT1G79560 35.437 206 115 7 169 362 527 726 9.47e-24 105
MS.gene35394.t1 AT5G08470 34.911 169 103 4 134 299 843 1007 1.29e-22 101
MS.gene35394.t1 AT4G04910 30.952 210 123 8 157 347 237 443 1.45e-18 89.0
MS.gene35394.t1 AT3G04340 31.746 189 119 7 130 311 779 964 9.26e-17 83.6
MS.gene35394.t1 AT4G24710 32.298 161 91 4 169 312 215 374 5.84e-16 80.1
MS.gene35394.t1 AT4G24710 32.298 161 91 4 169 312 203 362 5.92e-16 80.1
MS.gene35394.t1 AT4G36580 27.488 211 121 5 167 349 381 587 1.69e-14 76.3
MS.gene35394.t1 AT2G18330 27.103 214 121 5 167 349 384 593 3.58e-14 75.1
MS.gene35394.t1 AT3G03060 26.667 225 133 6 167 363 385 605 6.15e-14 74.3
MS.gene35394.t1 AT5G16930 26.923 208 123 5 167 349 397 600 6.66e-14 74.3

Find 115 sgRNAs with CRISPR-Local

Find 345 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTGAATTCCGCGATTATT+AGG 0.168316 2.1:+15851643 MS.gene35394:CDS
CTGCAAGAACAAGAACTTTC+TGG 0.202134 2.1:-15855111 None:intergenic
AAGGATGGTGGTGGGGAGGG+TGG 0.244754 2.1:+15851573 MS.gene35394:CDS
GGTGGGGAGGGTGGTGGAGG+TGG 0.245687 2.1:+15851582 MS.gene35394:CDS
GATGGTGGTGGGGAGGGTGG+TGG 0.246166 2.1:+15851576 MS.gene35394:CDS
TCAAAATCTGTTCTTGTAAT+GGG 0.258427 2.1:-15855926 None:intergenic
GGTGGTGGGGAGGGTGGTGG+AGG 0.266118 2.1:+15851579 MS.gene35394:CDS
GTGCTTGATGACGGTGGGCC+AGG 0.284572 2.1:+15851498 MS.gene35394:CDS
TTTCTCGAGCCATTTGAAAA+AGG 0.305402 2.1:-15853938 None:intergenic
TTCAAAATCTGTTCTTGTAA+TGG 0.305475 2.1:-15855927 None:intergenic
GTTGAATTCCGCGATTATTA+GGG 0.313888 2.1:+15851644 MS.gene35394:CDS
GAGAGATTCACAAAGGAGTT+TGG 0.323238 2.1:+15856004 MS.gene35394:CDS
GGCCCGCCAACACATGTTTA+AGG 0.326809 2.1:+15855296 MS.gene35394:CDS
TCTAAAGCGTTCATGTATAA+AGG 0.341061 2.1:-15851372 None:intergenic
AACGATGTATAGCAATTTCA+TGG 0.352772 2.1:+15851281 None:intergenic
GAGTGCTAAACAGGCTTTGC+AGG 0.354509 2.1:+15851707 MS.gene35394:CDS
GGGGAAGGATGGTGGTGGGG+AGG 0.359432 2.1:+15851569 MS.gene35394:CDS
ATTTGTATTTGCAGGCAATA+AGG 0.365094 2.1:+15855229 MS.gene35394:intron
AAAGAAGAACATAGCATCTT+GGG 0.376196 2.1:-15855646 None:intergenic
TACGTCGTGCTGAGGAGATC+AGG 0.383073 2.1:+15851472 MS.gene35394:CDS
TAAAGAAGAACATAGCATCT+TGG 0.387294 2.1:-15855647 None:intergenic
TATTCCACTACCAGATTTGA+AGG 0.389227 2.1:+15855275 MS.gene35394:CDS
TAAGGGGAAGGATGGTGGTG+GGG 0.390562 2.1:+15851566 MS.gene35394:CDS
TCCTCATAATTTAACTGAAA+AGG 0.391490 2.1:+15855444 MS.gene35394:CDS
GGGAAGGATGGTGGTGGGGA+GGG 0.396231 2.1:+15851570 MS.gene35394:CDS
TTGTATGGACCTCCTGGAAC+TGG 0.396491 2.1:+15853083 MS.gene35394:CDS
CCCTGTTGCTTTGGTCCACA+TGG 0.396687 2.1:-15855693 None:intergenic
CCCATGTGGACCAAAGCAAC+AGG 0.401299 2.1:+15855692 MS.gene35394:CDS
TGAATCTCTCATGAACTTCA+AGG 0.403290 2.1:-15855991 None:intergenic
TGGGTTGGAGAGTGCTAAAC+AGG 0.403615 2.1:+15851698 MS.gene35394:CDS
TGAACTGCGCCCTGTTGCTT+TGG 0.404749 2.1:-15855702 None:intergenic
TCCGGCATTGTCTTCGTGTA+CGG 0.414643 2.1:-15851331 None:intergenic
GAGGGTGGTGGAGGTGGTGA+AGG 0.417655 2.1:+15851588 MS.gene35394:CDS
TGTTGGCGGGCCTTCAAATC+TGG 0.417810 2.1:-15855285 None:intergenic
CTTCTCCACGCTGGCCACAT+AGG 0.417992 2.1:-15853998 None:intergenic
AGTAAGGGGAAGGATGGTGG+TGG 0.426631 2.1:+15851564 MS.gene35394:CDS
ACGAATCAAAACAGAACTTC+TGG 0.429142 2.1:+15854043 MS.gene35394:CDS
ACAAAGGAGTTTGGAGAAGA+AGG 0.429561 2.1:+15856013 MS.gene35394:CDS
ACATCATTCCACTTAACATT+CGG 0.446378 2.1:-15851672 None:intergenic
GGGCCAGGGCCAGCTTCTAA+TGG 0.448570 2.1:+15851513 MS.gene35394:CDS
TTCATCAACAAATATGATAG+AGG 0.451811 2.1:-15853967 None:intergenic
CCATCCTTCCCCTTACTCTT+CGG 0.459708 2.1:-15851558 None:intergenic
TGCTACGAGGCCGAAGAGTA+AGG 0.461247 2.1:+15851548 MS.gene35394:CDS
GTGGAATGATGTTGCTGGGT+TGG 0.467137 2.1:+15851683 MS.gene35394:CDS
TCGCCATTAGAAGCTGGCCC+TGG 0.467828 2.1:-15851516 None:intergenic
TAAATTGAGCAGGTGCATCT+TGG 0.468085 2.1:+15855415 MS.gene35394:intron
AGATCTTGTTTCAAAGTGGA+TGG 0.468719 2.1:+15853890 MS.gene35394:CDS
GCTCTAAGCTTTGCTTGCTC+CGG 0.469762 2.1:-15851618 None:intergenic
TTAAGAGTCCTGAGGGTATG+TGG 0.469882 2.1:+15855667 MS.gene35394:CDS
GTTAAGTGGAATGATGTTGC+TGG 0.471480 2.1:+15851678 MS.gene35394:CDS
CTTACCTGGTCTAAAGCATA+AGG 0.474963 2.1:-15855145 None:intergenic
TGAAAAGGATTATGAATACT+TGG 0.477851 2.1:+15855459 MS.gene35394:CDS
GTAAGGGGAAGGATGGTGGT+GGG 0.478141 2.1:+15851565 MS.gene35394:CDS
TGCCTTAAACATGTGTTGGC+GGG 0.478809 2.1:-15855298 None:intergenic
ATTATGAATACTTGGCTAGC+AGG 0.480856 2.1:+15855467 MS.gene35394:CDS
TTGCCTTAAACATGTGTTGG+CGG 0.483730 2.1:-15855299 None:intergenic
TTCTTCTTTAAGAGTCCTGA+GGG 0.484201 2.1:+15855660 MS.gene35394:CDS
AGAACTTCTGGTGCAGATGC+AGG 0.485421 2.1:+15854055 MS.gene35394:CDS
ATGACGGATCTTGCTACAAA+AGG 0.487123 2.1:+15855732 MS.gene35394:CDS
TGGTGGAGGTGGTGAAGGAG+AGG 0.488082 2.1:+15851593 MS.gene35394:CDS
CCCTTGCCTTAAACATGTGT+TGG 0.488382 2.1:-15855302 None:intergenic
AGGTGGTGAAGGAGAGGATC+CGG 0.491616 2.1:+15851599 MS.gene35394:CDS
TGCTTGATGACGGTGGGCCA+GGG 0.491756 2.1:+15851499 MS.gene35394:CDS
TTCTCCACGCTGGCCACATA+GGG 0.495975 2.1:-15853997 None:intergenic
CATCAGATCTTGTTTCAAAG+TGG 0.499401 2.1:+15853886 MS.gene35394:CDS
CAAAATCTGTTCTTGTAATG+GGG 0.501472 2.1:-15855925 None:intergenic
CTATGTGGCCAGCGTGGAGA+AGG 0.514378 2.1:+15853999 MS.gene35394:CDS
GAGCAAGCAAAGCTTAGAGC+GGG 0.515860 2.1:+15851621 MS.gene35394:CDS
AAAAGGTTCTTGCTAGGCAA+AGG 0.518856 2.1:+15855948 MS.gene35394:CDS
TACAAAAGGACTTGCTTCAA+AGG 0.521759 2.1:+15855746 MS.gene35394:CDS
TCATCAACAAATATGATAGA+GGG 0.526931 2.1:-15853966 None:intergenic
GCGGCATCGCCATTAGAAGC+TGG 0.534830 2.1:-15851522 None:intergenic
TGGAAAATCATATTTAGCTA+AGG 0.535949 2.1:+15853103 MS.gene35394:CDS
GGGAAAAGCCGAATGTTAAG+TGG 0.537432 2.1:+15851664 MS.gene35394:CDS
CGGGCCTTCAAATCTGGTAG+TGG 0.539272 2.1:-15855279 None:intergenic
AAAATCTGTTCTTGTAATGG+GGG 0.541123 2.1:-15855924 None:intergenic
AGCTTCTAATGGCGATGCCG+CGG 0.546566 2.1:+15851524 MS.gene35394:CDS
CCGAAGAGTAAGGGGAAGGA+TGG 0.547863 2.1:+15851558 MS.gene35394:CDS
GCTACGAGGCCGAAGAGTAA+GGG 0.547998 2.1:+15851549 MS.gene35394:CDS
TACTTGGCTAGCAGGACAGA+GGG 0.548985 2.1:+15855475 MS.gene35394:CDS
CCTGTTGCTTTGGTCCACAT+GGG 0.563250 2.1:-15855692 None:intergenic
CGCAGTTCAAACTACAATGA+CGG 0.571283 2.1:+15855716 MS.gene35394:CDS
GTTCTTCTTTAAGAGTCCTG+AGG 0.572301 2.1:+15855659 MS.gene35394:CDS
AGCTAAGGCAGTTGCAACTG+AGG 0.574398 2.1:+15853118 MS.gene35394:CDS
GATCTTGTTTCAAAGTGGAT+GGG 0.577099 2.1:+15853891 MS.gene35394:CDS
CACACCTTATGCTTTAGACC+AGG 0.580873 2.1:+15855141 MS.gene35394:CDS
AGGGCTGTGCTTGATGACGG+TGG 0.587321 2.1:+15851492 MS.gene35394:CDS
ACGTCGTGCTGAGGAGATCA+GGG 0.588419 2.1:+15851473 MS.gene35394:CDS
CTCAGCACGACGTAAATACT+CGG 0.590884 2.1:-15851463 None:intergenic
AAGAGTAAGGGGAAGGATGG+TGG 0.591605 2.1:+15851561 MS.gene35394:CDS
ATCAGGGCTGTGCTTGATGA+CGG 0.592760 2.1:+15851489 MS.gene35394:CDS
TCTCATTGCCTTCTCCACGC+TGG 0.597326 2.1:-15854007 None:intergenic
GCCGTACACGAAGACAATGC+CGG 0.598847 2.1:+15851330 MS.gene35394:CDS
CGAGTATTTACGTCGTGCTG+AGG 0.603573 2.1:+15851464 MS.gene35394:CDS
CATGGGATCCACATACCCTC+AGG 0.604619 2.1:-15855675 None:intergenic
TTAAGTGGAATGATGTTGCT+GGG 0.607930 2.1:+15851679 MS.gene35394:CDS
GGGCTGTGCTTGATGACGGT+GGG 0.609283 2.1:+15851493 MS.gene35394:CDS
CTACGAGGCCGAAGAGTAAG+GGG 0.613832 2.1:+15851550 MS.gene35394:CDS
CCACTCATATTGTAGGGTGT+AGG 0.618221 2.1:+15855079 MS.gene35394:intron
GCGATGCCGCGGTTGCTACG+AGG 0.619805 2.1:+15851535 MS.gene35394:CDS
AAATCTGTTCTTGTAATGGG+GGG 0.629544 2.1:-15855923 None:intergenic
CATCAACAAATATGATAGAG+GGG 0.637776 2.1:-15853965 None:intergenic
GATGAAATAGATTCCCTATG+TGG 0.643720 2.1:+15853984 MS.gene35394:CDS
GAGGCCGAAGAGTAAGGGGA+AGG 0.649712 2.1:+15851554 MS.gene35394:CDS
ATCAACAAATATGATAGAGG+GGG 0.666172 2.1:-15853964 None:intergenic
GAGGGTATGTGGATCCCATG+TGG 0.666781 2.1:+15855678 MS.gene35394:CDS
CCATGTGGACCAAAGCAACA+GGG 0.676849 2.1:+15855693 MS.gene35394:CDS
ATACTTGGCTAGCAGGACAG+AGG 0.680894 2.1:+15855474 MS.gene35394:CDS
GATTCCCTATGTGGCCAGCG+TGG 0.682011 2.1:+15853993 MS.gene35394:CDS
CTTCGGCCTCGTAGCAACCG+CGG 0.685179 2.1:-15851541 None:intergenic
GGAGCAAGCAAAGCTTAGAG+CGG 0.694367 2.1:+15851620 MS.gene35394:CDS
AGTTCATGAGAGATTCACAA+AGG 0.699715 2.1:+15855997 MS.gene35394:CDS
TTTCAGGTAAAAGACGACCA+TGG 0.700290 2.1:+15853048 MS.gene35394:intron
AGCAAGCAAAGCTTAGAGCG+GGG 0.702314 2.1:+15851622 MS.gene35394:CDS
ACTTGGCTAGCAGGACAGAG+GGG 0.708147 2.1:+15855476 MS.gene35394:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATAACAATAAAATTC+AGG - chr2.1:15855349-15855368 None:intergenic 10.0%
!! AAATAAAGAGAAATACAAAA+AGG - chr2.1:15855047-15855066 None:intergenic 15.0%
!! AATAATATAGTAATTTCCAT+AGG - chr2.1:15853466-15853485 None:intergenic 15.0%
!! ATAGGTAAAAAAATGATATA+GGG - chr2.1:15853528-15853547 None:intergenic 15.0%
!! TATAGGTAAAAAAATGATAT+AGG - chr2.1:15853529-15853548 None:intergenic 15.0%
!! TCTTTATCTTATCAATATAT+AGG - chr2.1:15853546-15853565 None:intergenic 15.0%
!! TGGAAATATTCAATAAATAA+AGG - chr2.1:15854193-15854212 None:intergenic 15.0%
!!! TTGTATTATATTTAGGTTTT+TGG - chr2.1:15853427-15853446 None:intergenic 15.0%
!!! TTTTTTTTACAGAAATGATT+TGG - chr2.1:15854213-15854232 None:intergenic 15.0%
!! AAAAAAATGATATAGGGTAA+AGG - chr2.1:15853522-15853541 None:intergenic 20.0%
!! AAATTGTTCAATTGTTTACA+TGG + chr2.1:15853163-15853182 MS.gene35394:intron 20.0%
!! AACTTTAATGATATATTGAC+AGG + chr2.1:15852950-15852969 MS.gene35394:intron 20.0%
!! AATAAGCTGAAAACAATTTA+TGG + chr2.1:15851919-15851938 MS.gene35394:intron 20.0%
!! AATTCTACTTAAATACCAAA+TGG - chr2.1:15853377-15853396 None:intergenic 20.0%
!! AGAACATAAACAAAAAATGT+TGG - chr2.1:15855024-15855043 None:intergenic 20.0%
!! ATAAGCTGAAAACAATTTAT+GGG + chr2.1:15851920-15851939 MS.gene35394:intron 20.0%
!! ATACAAAATTGCAAATCTTA+AGG + chr2.1:15852705-15852724 MS.gene35394:intron 20.0%
!! GTTAAAGAAATTTCTACATT+AGG + chr2.1:15853205-15853224 MS.gene35394:intron 20.0%
!! TACAAAATTGCAAATCTTAA+GGG + chr2.1:15852706-15852725 MS.gene35394:intron 20.0%
!! TAGGACTTTGTATTATATTT+AGG - chr2.1:15853434-15853453 None:intergenic 20.0%
!! TGATAAGATAAAGATGAAAA+GGG + chr2.1:15853552-15853571 MS.gene35394:intron 20.0%
!! TTATATATAAACCTAGCAAA+TGG + chr2.1:15855360-15855379 MS.gene35394:intron 20.0%
!! TTGATAAGATAAAGATGAAA+AGG + chr2.1:15853551-15853570 MS.gene35394:intron 20.0%
!! TTGCTTCTTATTAGTATATT+GGG + chr2.1:15854772-15854791 MS.gene35394:intron 20.0%
!! TTTCTGTATTGTTATGAATT+AGG + chr2.1:15853801-15853820 MS.gene35394:intron 20.0%
!!! AAAAACTTTTTAATCTCTTC+AGG + chr2.1:15855590-15855609 MS.gene35394:intron 20.0%
!!! AAAAATATCGTTTAAAACGA+AGG - chr2.1:15854668-15854687 None:intergenic 20.0%
!!! AACGTGTCATTTTATTTTTT+TGG + chr2.1:15855387-15855406 MS.gene35394:intron 20.0%
!!! AATGCTTCAATTTTTTATGT+TGG + chr2.1:15854444-15854463 MS.gene35394:intron 20.0%
!!! CAAAAGTTAAAAATGCTTTT+AGG - chr2.1:15853845-15853864 None:intergenic 20.0%
!!! GTTGTTTTTATATGATATCA+TGG + chr2.1:15851884-15851903 MS.gene35394:intron 20.0%
!!! GTTTTTTTCGTACTTTAAAT+GGG - chr2.1:15851409-15851428 None:intergenic 20.0%
!!! GTTTTTTTTTATGTGTGATT+TGG - chr2.1:15854240-15854259 None:intergenic 20.0%
!!! TGGTTGTATTTTTTTGAAAT+TGG + chr2.1:15855800-15855819 MS.gene35394:intron 20.0%
!!! TTTTTAAATGTAGTTTTCCT+TGG + chr2.1:15854332-15854351 MS.gene35394:intron 20.0%
!!! TTTTTGAAATTGGAGAAATA+GGG + chr2.1:15855810-15855829 MS.gene35394:intron 20.0%
!!! TTTTTGTAGGCATTTTTTTA+GGG - chr2.1:15854636-15854655 None:intergenic 20.0%
!!! TTTTTTGAAATTGGAGAAAT+AGG + chr2.1:15855809-15855828 MS.gene35394:intron 20.0%
! AAAATGAACATGATGTATCT+TGG + chr2.1:15853577-15853596 MS.gene35394:intron 25.0%
! AAATCAATATGATCAATCCT+TGG - chr2.1:15852608-15852627 None:intergenic 25.0%
! AACATTGTAATCAGTTTAGT+TGG + chr2.1:15854108-15854127 MS.gene35394:intron 25.0%
! AAGAAATTCATCCAAGTAAA+AGG - chr2.1:15855568-15855587 None:intergenic 25.0%
! AATGAAATCATATTCTCAAG+TGG + chr2.1:15853258-15853277 MS.gene35394:intron 25.0%
! AATGATGTAAATATTAGCGA+TGG - chr2.1:15854912-15854931 None:intergenic 25.0%
! ACATATCTTTAATTGACATG+AGG + chr2.1:15855861-15855880 MS.gene35394:intron 25.0%
! AGCATTAATTACGAATTAAC+AGG - chr2.1:15854430-15854449 None:intergenic 25.0%
! ATCGCTAATATTTACATCAT+TGG + chr2.1:15854911-15854930 MS.gene35394:intron 25.0%
! ATTATGCATAAAGAACTAGA+AGG + chr2.1:15852535-15852554 MS.gene35394:intron 25.0%
! CAATATACTAATAAGAAGCA+AGG - chr2.1:15854773-15854792 None:intergenic 25.0%
! CAGTTATATAGTGTAATATG+TGG + chr2.1:15854165-15854184 MS.gene35394:intron 25.0%
! CTTGCTTCTTATTAGTATAT+TGG + chr2.1:15854771-15854790 MS.gene35394:intron 25.0%
! TCAAAATCTGTTCTTGTAAT+GGG - chr2.1:15855929-15855948 None:intergenic 25.0%
! TCATCAACAAATATGATAGA+GGG - chr2.1:15853969-15853988 None:intergenic 25.0%
! TCCTCATAATTTAACTGAAA+AGG + chr2.1:15855444-15855463 MS.gene35394:CDS 25.0%
! TCTAATCAATTTGTATTTGC+AGG + chr2.1:15855221-15855240 MS.gene35394:intron 25.0%
! TGAAAAGGATTATGAATACT+TGG + chr2.1:15855459-15855478 MS.gene35394:CDS 25.0%
! TGGAAAATCATATTTAGCTA+AGG + chr2.1:15853103-15853122 MS.gene35394:CDS 25.0%
! TTCAAAATCTGTTCTTGTAA+TGG - chr2.1:15855930-15855949 None:intergenic 25.0%
! TTCATCAACAAATATGATAG+AGG - chr2.1:15853970-15853989 None:intergenic 25.0%
! TTTCAATTTCAAGAACTTGA+AGG + chr2.1:15854384-15854403 MS.gene35394:intron 25.0%
!! ACAATTTTACCTGAAAAATG+TGG - chr2.1:15853150-15853169 None:intergenic 25.0%
!! TAATTGCTTCTCTGATTTTA+GGG - chr2.1:15851431-15851450 None:intergenic 25.0%
!! TCCTTTTCAGTTAAATTATG+AGG - chr2.1:15855448-15855467 None:intergenic 25.0%
!! TTTGTTGTCTTCTCAATATT+AGG + chr2.1:15852467-15852486 MS.gene35394:intron 25.0%
!!! AAGTTTCCTCAATTTTTTAC+TGG + chr2.1:15851750-15851769 MS.gene35394:CDS 25.0%
!!! AGAATTATTTTTGTCTTACC+TGG - chr2.1:15855162-15855181 None:intergenic 25.0%
!!! AGGATTGATCATATTGATTT+TGG + chr2.1:15852608-15852627 MS.gene35394:intron 25.0%
!!! ATATTTAGGTTTTTGGCATT+TGG - chr2.1:15853420-15853439 None:intergenic 25.0%
!!! GGTTTTTTTCGTACTTTAAA+TGG - chr2.1:15851410-15851429 None:intergenic 25.0%
!!! GTTTTTGTAGGCATTTTTTT+AGG - chr2.1:15854637-15854656 None:intergenic 25.0%
!!! TACAAGAACAGATTTTGAAA+AGG + chr2.1:15855931-15855950 MS.gene35394:CDS 25.0%
!!! TTTTTTTGACGAATAAAGCA+TGG - chr2.1:15853736-15853755 None:intergenic 25.0%
AAAAATTGAGGAAACTTGAC+AGG - chr2.1:15851747-15851766 None:intergenic 30.0%
AAAATCTGTTCTTGTAATGG+GGG - chr2.1:15855927-15855946 None:intergenic 30.0%
AAAGAAGAACATAGCATCTT+GGG - chr2.1:15855649-15855668 None:intergenic 30.0%
AAGATCTGATGAAGAAATAC+TGG - chr2.1:15853877-15853896 None:intergenic 30.0%
AAGATTGGATATCAATACCA+AGG + chr2.1:15852588-15852607 MS.gene35394:intron 30.0%
AATACAAGCATGCACTTAAA+TGG - chr2.1:15854295-15854314 None:intergenic 30.0%
AATTATGATGTATGTTGCTC+TGG + chr2.1:15853625-15853644 MS.gene35394:intron 30.0%
ACATCATTCCACTTAACATT+CGG - chr2.1:15851675-15851694 None:intergenic 30.0%
ACCTTAAAAAGTTGGGTTAA+TGG - chr2.1:15854577-15854596 None:intergenic 30.0%
AGACTGACAAATAAAAACCA+AGG - chr2.1:15854352-15854371 None:intergenic 30.0%
AGCGAAAGCAAGATTATATT+GGG + chr2.1:15852920-15852939 MS.gene35394:intron 30.0%
AGTTTATCCACTCATATTGT+AGG + chr2.1:15855072-15855091 MS.gene35394:intron 30.0%
ATACAAGCATGCACTTAAAT+GGG - chr2.1:15854294-15854313 None:intergenic 30.0%
ATCAACAAATATGATAGAGG+GGG - chr2.1:15853967-15853986 None:intergenic 30.0%
ATCGAATGTGTATAGTTATG+TGG + chr2.1:15852988-15853007 MS.gene35394:intron 30.0%
ATGTTGGAGTAGAAAATGTT+GGG + chr2.1:15854460-15854479 MS.gene35394:intron 30.0%
ATTATGATGTATGTTGCTCT+GGG + chr2.1:15853626-15853645 MS.gene35394:intron 30.0%
ATTATTGTCTTTGTCGTGTT+TGG + chr2.1:15851786-15851805 MS.gene35394:intron 30.0%
ATTTGTATTTGCAGGCAATA+AGG + chr2.1:15855229-15855248 MS.gene35394:intron 30.0%
CAAAATCTGTTCTTGTAATG+GGG - chr2.1:15855928-15855947 None:intergenic 30.0%
CATCAACAAATATGATAGAG+GGG - chr2.1:15853968-15853987 None:intergenic 30.0%
CCTTAAAAAGTTGGGTTAAT+GGG - chr2.1:15854576-15854595 None:intergenic 30.0%
CTGACACTTCAATTAATTGA+AGG - chr2.1:15852435-15852454 None:intergenic 30.0%
GAATAAAGCATGGAAAATTG+AGG - chr2.1:15853726-15853745 None:intergenic 30.0%
GAGAATATGATTTCATTCCA+AGG - chr2.1:15853255-15853274 None:intergenic 30.0%
GTTTATCCACTCATATTGTA+GGG + chr2.1:15855073-15855092 MS.gene35394:intron 30.0%
TAAAGAAGAACATAGCATCT+TGG - chr2.1:15855650-15855669 None:intergenic 30.0%
TACTTAAATACCAAATGGCT+AGG - chr2.1:15853372-15853391 None:intergenic 30.0%
TAGTTCAATCCATATCGAAA+TGG + chr2.1:15852343-15852362 MS.gene35394:intron 30.0%
TATGTTGGAGTAGAAAATGT+TGG + chr2.1:15854459-15854478 MS.gene35394:intron 30.0%
TCCCAAAACCTTAAAAAGTT+GGG - chr2.1:15854584-15854603 None:intergenic 30.0%
TTATGAATTAGGCACATAAG+TGG + chr2.1:15853812-15853831 MS.gene35394:intron 30.0%
TTCCCAAAACCTTAAAAAGT+TGG - chr2.1:15854585-15854604 None:intergenic 30.0%
TTCCTTTGTTCAGCATATTA+TGG + chr2.1:15854848-15854867 MS.gene35394:intron 30.0%
! AAACGCTTTTGAATAGTTTC+CGG - chr2.1:15851352-15851371 None:intergenic 30.0%
! AAATATGATTTTCCAGTTCC+AGG - chr2.1:15853098-15853117 None:intergenic 30.0%
! AAGGATCTGCATAAGTTTTA+AGG - chr2.1:15855900-15855919 None:intergenic 30.0%
! CAATTAATTGAAGGTGTGTT+TGG - chr2.1:15852426-15852445 None:intergenic 30.0%
! CATGTTTTCAATGTTTTGTG+CGG + chr2.1:15852813-15852832 MS.gene35394:intron 30.0%
! CCTCTCTTACAATGTATTTT+GGG + chr2.1:15854946-15854965 MS.gene35394:intron 30.0%
! CGAGATACTATAGATTTTGA+TGG + chr2.1:15855773-15855792 MS.gene35394:intron 30.0%
! GTAATTGCTTCTCTGATTTT+AGG - chr2.1:15851432-15851451 None:intergenic 30.0%
! TCCTCTCTTACAATGTATTT+TGG + chr2.1:15854945-15854964 MS.gene35394:intron 30.0%
! TCTAAAGCGTTCATGTATAA+AGG - chr2.1:15851375-15851394 None:intergenic 30.0%
! TGAATTTTTCTTGTCTTAGC+AGG + chr2.1:15854691-15854710 MS.gene35394:intron 30.0%
! TTTTTAATCTCTTCAGGTGA+AGG + chr2.1:15855596-15855615 MS.gene35394:intron 30.0%
!! AAAACTTTGAAACCATGAAG+TGG + chr2.1:15852856-15852875 MS.gene35394:intron 30.0%
!! AGTTGGCAAGTTTGTTAATT+TGG + chr2.1:15852660-15852679 MS.gene35394:intron 30.0%
!! ATTTTGAAAAGGTTCTTGCT+AGG + chr2.1:15855942-15855961 MS.gene35394:CDS 30.0%
!!! AACCCAACTTTTTAAGGTTT+TGG + chr2.1:15854579-15854598 MS.gene35394:intron 30.0%
!!! AAGGCTTAGTTTGTTTTTGT+AGG - chr2.1:15854649-15854668 None:intergenic 30.0%
!!! ACCCAACTTTTTAAGGTTTT+GGG + chr2.1:15854580-15854599 MS.gene35394:intron 30.0%
!!! AGGATTGTGTTTGTCTTTTT+TGG + chr2.1:15852555-15852574 MS.gene35394:intron 30.0%
!!! ATCTGCATAAGTTTTAAGGT+GGG - chr2.1:15855896-15855915 None:intergenic 30.0%
!!! ATTGTGTTTGTCTTTTTTGG+GGG + chr2.1:15852558-15852577 MS.gene35394:intron 30.0%
!!! CATATTGATTTTGGTATGCA+AGG + chr2.1:15852617-15852636 MS.gene35394:intron 30.0%
!!! GATTGTGTTTGTCTTTTTTG+GGG + chr2.1:15852557-15852576 MS.gene35394:intron 30.0%
!!! GGATTGTGTTTGTCTTTTTT+GGG + chr2.1:15852556-15852575 MS.gene35394:intron 30.0%
!!! GGTTTCAAACCTTTTTCAAA+TGG + chr2.1:15853929-15853948 MS.gene35394:CDS 30.0%
!!! TTCCTCAATTTTTTACTGGT+GGG + chr2.1:15851754-15851773 MS.gene35394:intron 30.0%
!!! TTTCCTCAATTTTTTACTGG+TGG + chr2.1:15851753-15851772 MS.gene35394:intron 30.0%
AAAAAGTTGGGTTAATGGGA+TGG - chr2.1:15854572-15854591 None:intergenic 35.0%
AAAAGTTGGGTTAATGGGAT+GGG - chr2.1:15854571-15854590 None:intergenic 35.0%
AACCCACCAGTAAAAAATTG+AGG - chr2.1:15851759-15851778 None:intergenic 35.0%
AAGCATGGAAAATTGAGGTA+TGG - chr2.1:15853721-15853740 None:intergenic 35.0%
AAGTAAAAGGCGATTGAAAC+AGG - chr2.1:15855555-15855574 None:intergenic 35.0%
AATGTTTACTATGCTTCCTG+CGG + chr2.1:15853021-15853040 MS.gene35394:intron 35.0%
ACACGTTAAAACCATTTGCT+AGG - chr2.1:15855374-15855393 None:intergenic 35.0%
ACGAATCAAAACAGAACTTC+TGG + chr2.1:15854043-15854062 MS.gene35394:CDS 35.0%
AGCATATTATGGTCTGTTGT+TGG + chr2.1:15854859-15854878 MS.gene35394:intron 35.0%
AGGTTCGTTATTCCTTAAGT+GGG - chr2.1:15852247-15852266 None:intergenic 35.0%
AGTTCATGAGAGATTCACAA+AGG + chr2.1:15855997-15856016 MS.gene35394:CDS 35.0%
ATTATGAATACTTGGCTAGC+AGG + chr2.1:15855467-15855486 MS.gene35394:CDS 35.0%
CAAGGATAATCCTTGTAATC+AGG - chr2.1:15853237-15853256 None:intergenic 35.0%
CCCAAAATACATTGTAAGAG+AGG - chr2.1:15854949-15854968 None:intergenic 35.0%
CTGATTACAAGGATTATCCT+TGG + chr2.1:15853235-15853254 MS.gene35394:intron 35.0%
CTTTGTCGTGTTTGGATAAA+CGG + chr2.1:15851794-15851813 MS.gene35394:intron 35.0%
GAAACAAAGAAGTTCCACAT+CGG + chr2.1:15854501-15854520 MS.gene35394:intron 35.0%
GACCATAATATGCTGAACAA+AGG - chr2.1:15854853-15854872 None:intergenic 35.0%
GAGCGAAAGCAAGATTATAT+TGG + chr2.1:15852919-15852938 MS.gene35394:intron 35.0%
GATGAAATAGATTCCCTATG+TGG + chr2.1:15853984-15854003 MS.gene35394:CDS 35.0%
GGCATTAAAATTTGAACTGC+AGG + chr2.1:15853324-15853343 MS.gene35394:intron 35.0%
GTGAGGGTTTATATAGGATT+GGG + chr2.1:15852282-15852301 MS.gene35394:intron 35.0%
GTTGAATTCCGCGATTATTA+GGG + chr2.1:15851644-15851663 MS.gene35394:CDS 35.0%
TAAGCAGTTATCGAGCATAT+AGG - chr2.1:15851832-15851851 None:intergenic 35.0%
TAAGTGCATGCTTGTATTTG+TGG + chr2.1:15854297-15854316 MS.gene35394:intron 35.0%
TACAACAAAAATGCTCTCCA+TGG - chr2.1:15853068-15853087 None:intergenic 35.0%
TAGGTTCGTTATTCCTTAAG+TGG - chr2.1:15852248-15852267 None:intergenic 35.0%
TGAAGAATACACAATGCAAG+TGG + chr2.1:15854540-15854559 MS.gene35394:intron 35.0%
TGAATCTCTCATGAACTTCA+AGG - chr2.1:15855994-15856013 None:intergenic 35.0%
TGTGAGGGTTTATATAGGAT+TGG + chr2.1:15852281-15852300 MS.gene35394:intron 35.0%
TTAAGTGGAATGATGTTGCT+GGG + chr2.1:15851679-15851698 MS.gene35394:CDS 35.0%
TTTACCGATGTTAATGTGCA+AGG + chr2.1:15852195-15852214 MS.gene35394:intron 35.0%
TTTCTCGAGCCATTTGAAAA+AGG - chr2.1:15853941-15853960 None:intergenic 35.0%
TTTGTTTCATATCTCGCACT+TGG - chr2.1:15854489-15854508 None:intergenic 35.0%
! AAATCTGTTCTTGTAATGGG+GGG - chr2.1:15855926-15855945 None:intergenic 35.0%
! AGATCTTGTTTCAAAGTGGA+TGG + chr2.1:15853890-15853909 MS.gene35394:CDS 35.0%
! AGCTTTTCACAGTTGAAAGT+TGG + chr2.1:15852643-15852662 MS.gene35394:intron 35.0%
! CATCAGATCTTGTTTCAAAG+TGG + chr2.1:15853886-15853905 MS.gene35394:CDS 35.0%
! CCCATTAACCCAACTTTTTA+AGG + chr2.1:15854573-15854592 MS.gene35394:intron 35.0%
! GATCTTGTTTCAAAGTGGAT+GGG + chr2.1:15853891-15853910 MS.gene35394:CDS 35.0%
! TACAAAAGGACTTGCTTCAA+AGG + chr2.1:15855746-15855765 MS.gene35394:CDS 35.0%
! TGTTTCAATCGCCTTTTACT+TGG + chr2.1:15855554-15855573 MS.gene35394:intron 35.0%
! TTCTTCTTTAAGAGTCCTGA+GGG + chr2.1:15855660-15855679 MS.gene35394:CDS 35.0%
! TTTCAAGAACTTGAAGGTGT+CGG + chr2.1:15854390-15854409 MS.gene35394:intron 35.0%
!! CAGGTAATAGCTTTATGTTG+TGG + chr2.1:15854074-15854093 MS.gene35394:intron 35.0%
!! CTATAGATTTTGATGGCTGT+TGG + chr2.1:15855780-15855799 MS.gene35394:intron 35.0%
!! TAGTTTGTTATTAGCCGATG+TGG - chr2.1:15854518-15854537 None:intergenic 35.0%
!! TTTGGCTTGATAAATTGAGC+AGG + chr2.1:15855405-15855424 MS.gene35394:intron 35.0%
!!! GATCTGCATAAGTTTTAAGG+TGG - chr2.1:15855897-15855916 None:intergenic 35.0%
!!! TAAGGTTTTGGGAACAAATG+TGG + chr2.1:15854591-15854610 MS.gene35394:intron 35.0%
!!! TCAATTTTTTACTGGTGGGT+TGG + chr2.1:15851758-15851777 MS.gene35394:intron 35.0%
!!! TGGAGAGCATTTTTGTTGTA+TGG + chr2.1:15853068-15853087 MS.gene35394:CDS 35.0%
AAAAGGTTCTTGCTAGGCAA+AGG + chr2.1:15855948-15855967 MS.gene35394:CDS 40.0%
AATATTAGCGATGGCGACTA+CGG - chr2.1:15854903-15854922 None:intergenic 40.0%
ACAAAGGAGTTTGGAGAAGA+AGG + chr2.1:15856013-15856032 MS.gene35394:CDS 40.0%
ATCTATCAGCATAAGCACCT+AGG - chr2.1:15851985-15852004 None:intergenic 40.0%
ATGCTGAACAAAGGAAAGCA+TGG - chr2.1:15854844-15854863 None:intergenic 40.0%
ATTGCCCAATTCCACTACTA+TGG - chr2.1:15854727-15854746 None:intergenic 40.0%
CAGTCACTTCCATTTCGATA+TGG - chr2.1:15852355-15852374 None:intergenic 40.0%
CGCAGTTCAAACTACAATGA+CGG + chr2.1:15855716-15855735 MS.gene35394:CDS 40.0%
CTATATCGACCCTTGTTCTA+TGG + chr2.1:15852023-15852042 MS.gene35394:intron 40.0%
CTCAAAAACCATGGCTGAAA+GGG - chr2.1:15852316-15852335 None:intergenic 40.0%
CTGCAAGAACAAGAACTTTC+TGG - chr2.1:15855114-15855133 None:intergenic 40.0%
CTGCAGGTAAGCAATTTCTT+AGG + chr2.1:15853340-15853359 MS.gene35394:intron 40.0%
CTTAAGTGGGACTCTAAGTT+GGG - chr2.1:15852234-15852253 None:intergenic 40.0%
GAATACACAATGCAAGTGGT+TGG + chr2.1:15854544-15854563 MS.gene35394:intron 40.0%
GAGAGATTCACAAAGGAGTT+TGG + chr2.1:15856004-15856023 MS.gene35394:CDS 40.0%
GATGGGTGAAAGTGAAAAAC+TGG + chr2.1:15853908-15853927 MS.gene35394:CDS 40.0%
GCTCTTACAAATAGTCTCCT+AGG + chr2.1:15851965-15851984 MS.gene35394:intron 40.0%
GGTTGAATTCCGCGATTATT+AGG + chr2.1:15851643-15851662 MS.gene35394:CDS 40.0%
GTTAAGTGGAATGATGTTGC+TGG + chr2.1:15851678-15851697 MS.gene35394:CDS 40.0%
GTTTGTGCTCCATAGAACAA+GGG - chr2.1:15852035-15852054 None:intergenic 40.0%
TAAATTGAGCAGGTGCATCT+TGG + chr2.1:15855415-15855434 MS.gene35394:intron 40.0%
TAATCATGAACCTCGTGTGA+GGG + chr2.1:15852266-15852285 MS.gene35394:intron 40.0%
TAGGAACTTGCCTGATTACA+AGG + chr2.1:15853224-15853243 MS.gene35394:intron 40.0%
TCAAAAACCATGGCTGAAAG+GGG - chr2.1:15852315-15852334 None:intergenic 40.0%
TGCATTGCTTGCTCTCTTAA+AGG + chr2.1:15853303-15853322 MS.gene35394:intron 40.0%
TGTTTGTGCTCCATAGAACA+AGG - chr2.1:15852036-15852055 None:intergenic 40.0%
TTGCCTTAAACATGTGTTGG+CGG - chr2.1:15855302-15855321 None:intergenic 40.0%
TTTGTTCCTAGCATTGCTGT+AGG + chr2.1:15854996-15855015 MS.gene35394:intron 40.0%
! ACATAGCATCTTGGGTTTTG+CGG - chr2.1:15855641-15855660 None:intergenic 40.0%
! AGGAAAGCATGGAACTATGA+TGG - chr2.1:15854833-15854852 None:intergenic 40.0%
! CCAACACATGTTTAAGGCAA+GGG + chr2.1:15855302-15855321 MS.gene35394:intron 40.0%
! CTTACCTGGTCTAAAGCATA+AGG - chr2.1:15855148-15855167 None:intergenic 40.0%
! CTTTCAGCCATGGTTTTTGA+GGG + chr2.1:15852315-15852334 MS.gene35394:intron 40.0%
! GTTCTTCTTTAAGAGTCCTG+AGG + chr2.1:15855659-15855678 MS.gene35394:CDS 40.0%
! TATGATTTTCCAGTTCCAGG+AGG - chr2.1:15853095-15853114 None:intergenic 40.0%
! TTTCAGGTAAAAGACGACCA+TGG + chr2.1:15853048-15853067 MS.gene35394:intron 40.0%
! TTTTCTTGTCTTAGCAGGAG+AGG + chr2.1:15854696-15854715 MS.gene35394:intron 40.0%
!! AGGCTGATTCCACATTTTTC+AGG + chr2.1:15853138-15853157 MS.gene35394:CDS 40.0%
!! ATGACGGATCTTGCTACAAA+AGG + chr2.1:15855732-15855751 MS.gene35394:CDS 40.0%
!! GGTTGTGATATTTTTCGACG+AGG + chr2.1:15855831-15855850 MS.gene35394:intron 40.0%
!! TTTCAGCCATGGTTTTTGAG+GGG + chr2.1:15852316-15852335 MS.gene35394:intron 40.0%
!! TTTCCATAGGACTTGCTGTT+AGG - chr2.1:15853453-15853472 None:intergenic 40.0%
!! TTTTTGTTGTATGGACCTCC+TGG + chr2.1:15853077-15853096 MS.gene35394:CDS 40.0%
!!! AGGTCACTTTTGCTTACTGT+AGG - chr2.1:15855974-15855993 None:intergenic 40.0%
!!! TGTTTGTCTTTTTTGGGGGA+GGG + chr2.1:15852562-15852581 MS.gene35394:intron 40.0%
ACCGATGTTAATGTGCAAGG+AGG + chr2.1:15852198-15852217 MS.gene35394:intron 45.0%
AGTCCTAACAGCAAGTCCTA+TGG + chr2.1:15853447-15853466 MS.gene35394:intron 45.0%
CCAACTTAGAGTCCCACTTA+AGG + chr2.1:15852232-15852251 MS.gene35394:intron 45.0%
CCACTCATATTGTAGGGTGT+AGG + chr2.1:15855079-15855098 MS.gene35394:intron 45.0%
CCCTCCTTGCACATTAACAT+CGG - chr2.1:15852202-15852221 None:intergenic 45.0%
CCCTTGCCTTAAACATGTGT+TGG - chr2.1:15855305-15855324 None:intergenic 45.0%
CCGATGTTAATGTGCAAGGA+GGG + chr2.1:15852199-15852218 MS.gene35394:intron 45.0%
CCTACACCCTACAATATGAG+TGG - chr2.1:15855082-15855101 None:intergenic 45.0%
CCTATATAAACCCTCACACG+AGG - chr2.1:15852279-15852298 None:intergenic 45.0%
CCTCAAAAACCATGGCTGAA+AGG - chr2.1:15852317-15852336 None:intergenic 45.0%
CCTCGTGTGAGGGTTTATAT+AGG + chr2.1:15852276-15852295 MS.gene35394:intron 45.0%
CCTTAAGTGGGACTCTAAGT+TGG - chr2.1:15852235-15852254 None:intergenic 45.0%
CTAATCATGAACCTCGTGTG+AGG + chr2.1:15852265-15852284 MS.gene35394:intron 45.0%
CTCACACGAGGTTCATGATT+AGG - chr2.1:15852267-15852286 None:intergenic 45.0%
CTCAGCACGACGTAAATACT+CGG - chr2.1:15851466-15851485 None:intergenic 45.0%
GGGAAAAGCCGAATGTTAAG+TGG + chr2.1:15851664-15851683 MS.gene35394:CDS 45.0%
TAACTCCCCCTCAAAAACCA+TGG - chr2.1:15852325-15852344 None:intergenic 45.0%
TAGGACTTTGCCTAGCCATT+TGG + chr2.1:15853359-15853378 MS.gene35394:intron 45.0%
TTGGAACCTACAGCAATGCT+AGG - chr2.1:15855005-15855024 None:intergenic 45.0%
TTTGTGCGGAGAACTCTACA+AGG + chr2.1:15852827-15852846 MS.gene35394:intron 45.0%
! CACACCTTATGCTTTAGACC+AGG + chr2.1:15855141-15855160 MS.gene35394:CDS 45.0%
! CCTTTCAGCCATGGTTTTTG+AGG + chr2.1:15852314-15852333 MS.gene35394:intron 45.0%
! CGGCTTTTCCCTAATAATCG+CGG - chr2.1:15851655-15851674 None:intergenic 45.0%
! GAGATTGAGCTGTTTCATGC+TGG + chr2.1:15854747-15854766 MS.gene35394:intron 45.0%
! GCCAACACATGTTTAAGGCA+AGG + chr2.1:15855301-15855320 MS.gene35394:intron 45.0%
! GGTCGTCTTTTACCTGAAAG+AGG - chr2.1:15853047-15853066 None:intergenic 45.0%
! TGCCTTAAACATGTGTTGGC+GGG - chr2.1:15855301-15855320 None:intergenic 45.0%
! TTAAGAGTCCTGAGGGTATG+TGG + chr2.1:15855667-15855686 MS.gene35394:CDS 45.0%
!! ATAGCTTCCTGCTGACTCTA+TGG - chr2.1:15855197-15855216 None:intergenic 45.0%
!! TAGCTTCCTGCTGACTCTAT+GGG - chr2.1:15855196-15855215 None:intergenic 45.0%
!! TTCAGCCATGGTTTTTGAGG+GGG + chr2.1:15852317-15852336 MS.gene35394:intron 45.0%
!! TTTGGCATTTGGTGCAGTTG+CGG - chr2.1:15853409-15853428 None:intergenic 45.0%
!!! GTGTTTGTCTTTTTTGGGGG+AGG + chr2.1:15852561-15852580 MS.gene35394:intron 45.0%
!!! GTTTGTCTTTTTTGGGGGAG+GGG + chr2.1:15852563-15852582 MS.gene35394:intron 45.0%
AAAACCATGGCTGAAAGGGG+AGG - chr2.1:15852312-15852331 None:intergenic 50.0%
AAGAGTAAGGGGAAGGATGG+TGG + chr2.1:15851561-15851580 MS.gene35394:CDS 50.0%
ACCATGAAGTGGCTGTTCTC+TGG + chr2.1:15852867-15852886 MS.gene35394:intron 50.0%
AGAACTTCTGGTGCAGATGC+AGG + chr2.1:15854055-15854074 MS.gene35394:CDS 50.0%
AGCAAGCAAAGCTTAGAGCG+GGG + chr2.1:15851622-15851641 MS.gene35394:CDS 50.0%
AGCTAAGGCAGTTGCAACTG+AGG + chr2.1:15853118-15853137 MS.gene35394:CDS 50.0%
ATACTTGGCTAGCAGGACAG+AGG + chr2.1:15855474-15855493 MS.gene35394:CDS 50.0%
ATCAGGGCTGTGCTTGATGA+CGG + chr2.1:15851489-15851508 MS.gene35394:CDS 50.0%
CCAATTCCACTACTATGGCC+CGG - chr2.1:15854722-15854741 None:intergenic 50.0%
CCATCCTTCCCCTTACTCTT+CGG - chr2.1:15851561-15851580 None:intergenic 50.0%
CCATGTGGACCAAAGCAACA+GGG + chr2.1:15855693-15855712 MS.gene35394:CDS 50.0%
CGAGTATTTACGTCGTGCTG+AGG + chr2.1:15851464-15851483 MS.gene35394:CDS 50.0%
GAGCAAGCAAAGCTTAGAGC+GGG + chr2.1:15851621-15851640 MS.gene35394:CDS 50.0%
GAGTGCTAAACAGGCTTTGC+AGG + chr2.1:15851707-15851726 MS.gene35394:CDS 50.0%
GGAGCAAGCAAAGCTTAGAG+CGG + chr2.1:15851620-15851639 MS.gene35394:CDS 50.0%
GTGGAATGATGTTGCTGGGT+TGG + chr2.1:15851683-15851702 MS.gene35394:CDS 50.0%
TACTTGGCTAGCAGGACAGA+GGG + chr2.1:15855475-15855494 MS.gene35394:CDS 50.0%
TATCACCCCATAGAGTCAGC+AGG + chr2.1:15855187-15855206 MS.gene35394:intron 50.0%
TCCAGAGAACAGCCACTTCA+TGG - chr2.1:15852871-15852890 None:intergenic 50.0%
TCCGGCATTGTCTTCGTGTA+CGG - chr2.1:15851334-15851353 None:intergenic 50.0%
TTGTATGGACCTCCTGGAAC+TGG + chr2.1:15853083-15853102 MS.gene35394:CDS 50.0%
TTTGGGGGAGGGGATAAGAT+TGG + chr2.1:15852573-15852592 MS.gene35394:intron 50.0%
! CGGGCCATAGTAGTGGAATT+GGG + chr2.1:15854720-15854739 MS.gene35394:intron 50.0%
! GCTCTAAGCTTTGCTTGCTC+CGG - chr2.1:15851621-15851640 None:intergenic 50.0%
! TCTGTTCTTGTAATGGGGGG+TGG - chr2.1:15855923-15855942 None:intergenic 50.0%
! TTCTTGTAATGGGGGGTGGA+AGG - chr2.1:15855919-15855938 None:intergenic 50.0%
! TTTTACCTGAAAGAGGCCGC+AGG - chr2.1:15853040-15853059 None:intergenic 50.0%
!! AGCTTCCTGCTGACTCTATG+GGG - chr2.1:15855195-15855214 None:intergenic 50.0%
!! CCTGTTGCTTTGGTCCACAT+GGG - chr2.1:15855695-15855714 None:intergenic 50.0%
!! TGGGTTGGAGAGTGCTAAAC+AGG + chr2.1:15851698-15851717 MS.gene35394:CDS 50.0%
ACGTCGTGCTGAGGAGATCA+GGG + chr2.1:15851473-15851492 MS.gene35394:CDS 55.0%
ACTTGGCTAGCAGGACAGAG+GGG + chr2.1:15855476-15855495 MS.gene35394:CDS 55.0%
AGCTTCTAATGGCGATGCCG+CGG + chr2.1:15851524-15851543 MS.gene35394:CDS 55.0%
AGGTGGTGAAGGAGAGGATC+CGG + chr2.1:15851599-15851618 MS.gene35394:CDS 55.0%
CAATCCTCCCCTTTCAGCCA+TGG + chr2.1:15852305-15852324 MS.gene35394:intron 55.0%
CATGGGATCCACATACCCTC+AGG - chr2.1:15855678-15855697 None:intergenic 55.0%
CCCATGTGGACCAAAGCAAC+AGG + chr2.1:15855692-15855711 MS.gene35394:CDS 55.0%
CCGAAGAGTAAGGGGAAGGA+TGG + chr2.1:15851558-15851577 MS.gene35394:CDS 55.0%
CTACGAGGCCGAAGAGTAAG+GGG + chr2.1:15851550-15851569 MS.gene35394:CDS 55.0%
CTTGTCTTAGCAGGAGAGGC+CGG + chr2.1:15854700-15854719 MS.gene35394:intron 55.0%
GCCGTACACGAAGACAATGC+CGG + chr2.1:15851330-15851349 MS.gene35394:CDS 55.0%
GCTACGAGGCCGAAGAGTAA+GGG + chr2.1:15851549-15851568 MS.gene35394:CDS 55.0%
GGCCCGCCAACACATGTTTA+AGG + chr2.1:15855296-15855315 MS.gene35394:CDS 55.0%
TACGTCGTGCTGAGGAGATC+AGG + chr2.1:15851472-15851491 MS.gene35394:CDS 55.0%
TCTCATTGCCTTCTCCACGC+TGG - chr2.1:15854010-15854029 None:intergenic 55.0%
TGCTACGAGGCCGAAGAGTA+AGG + chr2.1:15851548-15851567 MS.gene35394:CDS 55.0%
TTCTCCACGCTGGCCACATA+GGG - chr2.1:15854000-15854019 None:intergenic 55.0%
TTGTCTTAGCAGGAGAGGCC+GGG + chr2.1:15854701-15854720 MS.gene35394:intron 55.0%
! AGCAGGACAGAGGGGTTTTC+TGG + chr2.1:15855484-15855503 MS.gene35394:CDS 55.0%
! AGTAAGGGGAAGGATGGTGG+TGG + chr2.1:15851564-15851583 MS.gene35394:CDS 55.0%
! CCGGGCCATAGTAGTGGAAT+TGG + chr2.1:15854719-15854738 MS.gene35394:intron 55.0%
! GAGGGTATGTGGATCCCATG+TGG + chr2.1:15855678-15855697 MS.gene35394:CDS 55.0%
! GCATCTTGGGTTTTGCGGAC+AGG - chr2.1:15855636-15855655 None:intergenic 55.0%
! GTAAGGGGAAGGATGGTGGT+GGG + chr2.1:15851565-15851584 MS.gene35394:CDS 55.0%
! TAAGGGGAAGGATGGTGGTG+GGG + chr2.1:15851566-15851585 MS.gene35394:CDS 55.0%
! TGAACTGCGCCCTGTTGCTT+TGG - chr2.1:15855705-15855724 None:intergenic 55.0%
! TGTTGGCGGGCCTTCAAATC+TGG - chr2.1:15855288-15855307 None:intergenic 55.0%
!! CCCTGTTGCTTTGGTCCACA+TGG - chr2.1:15855696-15855715 None:intergenic 55.0%
CTATGTGGCCAGCGTGGAGA+AGG + chr2.1:15853999-15854018 MS.gene35394:CDS 60.0%
CTTCTCCACGCTGGCCACAT+AGG - chr2.1:15854001-15854020 None:intergenic 60.0%
GAGGCCGAAGAGTAAGGGGA+AGG + chr2.1:15851554-15851573 MS.gene35394:CDS 60.0%
GATTCCCTATGTGGCCAGCG+TGG + chr2.1:15853993-15854012 MS.gene35394:CDS 60.0%
GCGGCATCGCCATTAGAAGC+TGG - chr2.1:15851525-15851544 None:intergenic 60.0%
TCGCCATTAGAAGCTGGCCC+TGG - chr2.1:15851519-15851538 None:intergenic 60.0%
TGCTTCCTGCGGCCTCTTTC+AGG + chr2.1:15853032-15853051 MS.gene35394:intron 60.0%
TGGTGGAGGTGGTGAAGGAG+AGG + chr2.1:15851593-15851612 MS.gene35394:CDS 60.0%
!! AGGGCTGTGCTTGATGACGG+TGG + chr2.1:15851492-15851511 MS.gene35394:CDS 60.0%
!! GGGCTGTGCTTGATGACGGT+GGG + chr2.1:15851493-15851512 MS.gene35394:CDS 60.0%
!! TGCTTGATGACGGTGGGCCA+GGG + chr2.1:15851499-15851518 MS.gene35394:CDS 60.0%
CTTCGGCCTCGTAGCAACCG+CGG - chr2.1:15851544-15851563 None:intergenic 65.0%
GAGAGGCCGGGCCATAGTAG+TGG + chr2.1:15854713-15854732 MS.gene35394:intron 65.0%
GGGCCAGGGCCAGCTTCTAA+TGG + chr2.1:15851513-15851532 MS.gene35394:CDS 65.0%
!! AAGGATGGTGGTGGGGAGGG+TGG + chr2.1:15851573-15851592 MS.gene35394:CDS 65.0%
!! GAGGGTGGTGGAGGTGGTGA+AGG + chr2.1:15851588-15851607 MS.gene35394:CDS 65.0%
!! GGGAAGGATGGTGGTGGGGA+GGG + chr2.1:15851570-15851589 MS.gene35394:CDS 65.0%
!! GTGCTTGATGACGGTGGGCC+AGG + chr2.1:15851498-15851517 MS.gene35394:CDS 65.0%
GCGATGCCGCGGTTGCTACG+AGG + chr2.1:15851535-15851554 MS.gene35394:CDS 70.0%
!! GATGGTGGTGGGGAGGGTGG+TGG + chr2.1:15851576-15851595 MS.gene35394:CDS 70.0%
!! GGGGAAGGATGGTGGTGGGG+AGG + chr2.1:15851569-15851588 MS.gene35394:CDS 70.0%
!! GGTGGGGAGGGTGGTGGAGG+TGG + chr2.1:15851582-15851601 MS.gene35394:CDS 75.0%
!! GGTGGTGGGGAGGGTGGTGG+AGG + chr2.1:15851579-15851598 MS.gene35394:CDS 75.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 15851285 15856039 15851285 ID=MS.gene35394
chr2.1 mRNA 15851285 15856039 15851285 ID=MS.gene35394.t1;Parent=MS.gene35394
chr2.1 exon 15851285 15851771 15851285 ID=MS.gene35394.t1.exon1;Parent=MS.gene35394.t1
chr2.1 CDS 15851285 15851771 15851285 ID=cds.MS.gene35394.t1;Parent=MS.gene35394.t1
chr2.1 exon 15853054 15853159 15853054 ID=MS.gene35394.t1.exon2;Parent=MS.gene35394.t1
chr2.1 CDS 15853054 15853159 15853054 ID=cds.MS.gene35394.t1;Parent=MS.gene35394.t1
chr2.1 exon 15853878 15854076 15853878 ID=MS.gene35394.t1.exon3;Parent=MS.gene35394.t1
chr2.1 CDS 15853878 15854076 15853878 ID=cds.MS.gene35394.t1;Parent=MS.gene35394.t1
chr2.1 exon 15855094 15855162 15855094 ID=MS.gene35394.t1.exon4;Parent=MS.gene35394.t1
chr2.1 CDS 15855094 15855162 15855094 ID=cds.MS.gene35394.t1;Parent=MS.gene35394.t1
chr2.1 exon 15855243 15855317 15855243 ID=MS.gene35394.t1.exon5;Parent=MS.gene35394.t1
chr2.1 CDS 15855243 15855317 15855243 ID=cds.MS.gene35394.t1;Parent=MS.gene35394.t1
chr2.1 exon 15855427 15855525 15855427 ID=MS.gene35394.t1.exon6;Parent=MS.gene35394.t1
chr2.1 CDS 15855427 15855525 15855427 ID=cds.MS.gene35394.t1;Parent=MS.gene35394.t1
chr2.1 exon 15855612 15855767 15855612 ID=MS.gene35394.t1.exon7;Parent=MS.gene35394.t1
chr2.1 CDS 15855612 15855767 15855612 ID=cds.MS.gene35394.t1;Parent=MS.gene35394.t1
chr2.1 exon 15855914 15856039 15855914 ID=MS.gene35394.t1.exon8;Parent=MS.gene35394.t1
chr2.1 CDS 15855914 15856039 15855914 ID=cds.MS.gene35394.t1;Parent=MS.gene35394.t1
Gene Sequence

>MS.gene35394

ATGTATAGCAATTTCATGGAACAAGCAATAGAGTACGTGAAACAAGCCGTACACGAAGACAATGCCGGAAACTATTCAAAAGCGTTTCCTTTATACATGAACGCTTTAGAGTATTTCAAAACCCATTTAAAGTACGAAAAAAACCCTAAAATCAGAGAAGCAATTACGCAGAAATTCACCGAGTATTTACGTCGTGCTGAGGAGATCAGGGCTGTGCTTGATGACGGTGGGCCAGGGCCAGCTTCTAATGGCGATGCCGCGGTTGCTACGAGGCCGAAGAGTAAGGGGAAGGATGGTGGTGGGGAGGGTGGTGGAGGTGGTGAAGGAGAGGATCCGGAGCAAGCAAAGCTTAGAGCGGGGTTGAATTCCGCGATTATTAGGGAAAAGCCGAATGTTAAGTGGAATGATGTTGCTGGGTTGGAGAGTGCTAAACAGGCTTTGCAGGAAGCAGTTATTTTGCCTGTCAAGTTTCCTCAATTTTTTACTGGTGGGTTGGTTAAAATTATTGTCTTTGTCGTGTTTGGATAAACGGTTTAATTAAATGCCTATATGCTCGATAACTGCTTATGTTTAAGTAACTATTTTCATATGAGCTATAAGTTGTTTTTATATGATATCATGGAGATCTTATGAAAATAAGCTGAAAACAATTTATGGGCTTGTTTAAGTTGTTTATTTAAGCTCTTACAAATAGTCTCCTAGGTGCTTATGCTGATAGATAAACTCAAATAAGTCAATCTATATCGACCCTTGTTCTATGGAGCACAAACATTAGACACGACTCTGACTCTGACTCTGACTCTGACTCTGACTCTGACTCTGACTCTGACTCTGACTCTGACTCTGACACTGACACGTAGACACTAGTATTAATTTAAGAAACGACACTAGTAATAATTTAAGAAAATGATTTACCGATGTTAATGTGCAAGGAGGGCTTCATGAACCCAACTTAGAGTCCCACTTAAGGAATAACGAACCTAATCATGAACCTCGTGTGAGGGTTTATATAGGATTGGGCAATCCTCCCCTTTCAGCCATGGTTTTTGAGGGGGAGTTAGTTCAATCCATATCGAAATGGAAGTGACTGAATGTAATTACAAGTGTCTATATTGTGATTGTGTTAGTGTGTCTGACACCAAACACACCTTCAATTAATTGAAGTGTCAGTGCTATATAAGTTTTGTTGTCTTCTCAATATTAGGCTATTAGTTTATATTCTTGTCACTAAATTTACATAACTGAAAGTAATTATGCATAAAGAACTAGAAGGATTGTGTTTGTCTTTTTTGGGGGAGGGGATAAGATTGGATATCAATACCAAGGATTGATCATATTGATTTTGGTATGCAAGGATGAGCTTTTCACAGTTGAAAGTTGGCAAGTTTGTTAATTTGGTTATTGTTTTCGTTTATTTACTATACAAAATTGCAAATCTTAAGGGTCTATTTGATTTTCATTTTGACTTTAATTTTATTTTATAGTTTCAAGTTTAATTACAAAAATGTCGATGTTTTTCACTTTGTTTCATGTTTTCAATGTTTTGTGCGGAGAACTCTACAAGGCTTTACAAAACTTTGAAACCATGAAGTGGCTGTTCTCTGGACAAAACATTGAATTGAATACATGAAATAGAGCGAAAGCAAGATTATATTGGGAGCTGAAAACTTTAATGATATATTGACAGGATAAGATGTACATTTATCGAATGTGTATAGTTATGTGGAACTTCATTTAATGTTTACTATGCTTCCTGCGGCCTCTTTCAGGTAAAAGACGACCATGGAGAGCATTTTTGTTGTATGGACCTCCTGGAACTGGAAAATCATATTTAGCTAAGGCAGTTGCAACTGAGGCTGATTCCACATTTTTCAGGTAAAATTGTTCAATTGTTTACATGGACAGTTTAAATTTTGCAGAGTTAAAGAAATTTCTACATTAGGAACTTGCCTGATTACAAGGATTATCCTTGGAATGAAATCATATTCTCAAGTGGAACAATATATTTTCTCAATTTATGCATTGCTTGCTCTCTTAAAGGCATTAAAATTTGAACTGCAGGTAAGCAATTTCTTAGGACTTTGCCTAGCCATTTGGTATTTAAGTAGAATTCTGTTTCAACCGCAACTGCACCAAATGCCAAAAACCTAAATATAATACAAAGTCCTAACAGCAAGTCCTATGGAAATTACTATATTATTGCTGAATAATTGCAACATTATTATAATTGATTTCCTTTACCCTATATCATTTTTTTACCTATATATTGATAAGATAAAGATGAAAAGGGTTAAAATGAACATGATGTATCTTGGTTAAAAAAATGTAAGAAATTTGAAGAATTATGATGTATGTTGCTCTGGGTCATTAATAATTGCTGATTGTGTAGCATTTAGAAAATGATATGTTCATCATTATTTACTTCATTAAAATCCATACCTCAATTTTCCATGCTTTATTCGTCAAAAAAAATGCTTATGTAAATTTAAGATATATTTGATCTATTAAAAGAGATCTTTCTGTATTGTTATGAATTAGGCACATAAGTGGACATATTCCTAAAAGCATTTTTAACTTTTGAATTCTTCACCAGTATTTCTTCATCAGATCTTGTTTCAAAGTGGATGGGTGAAAGTGAAAAACTGGTTTCAAACCTTTTTCAAATGGCTCGAGAAAGTGCCCCCTCTATCATATTTGTTGATGAAATAGATTCCCTATGTGGCCAGCGTGGAGAAGGCAATGAGAGTGAAGCTTCAAGACGAATCAAAACAGAACTTCTGGTGCAGATGCAGGTAATAGCTTTATGTTGTGGAGATGTCAATAAACATTGTAATCAGTTTAGTTGGTTATAATTGAATTGCATCATGCACAGCTTAGTCTCAGTTATATAGTGTAATATGTGGATCCTTTATTTATTGAATATTTCCAAATCATTTCTGTAAAAAAAATTATCCAAATCACACATAAAAAAAAACAAAATTGTTTTCTTGTATGCTTTAATACAATCCCATTTAAGTGCATGCTTGTATTTGTGGTTCATTTTTCAATTTTTAAATGTAGTTTTCCTTGGTTTTTATTTGTCAGTCTAATACAATTGCTTTTCAATTTCAAGAACTTGAAGGTGTCGGATAATTTCTTGATGCCTGTTAATTCGTAATTAATGCTTCAATTTTTTATGTTGGAGTAGAAAATGTTGGGTATCCAAGTGCGAGATATGAAACAAAGAAGTTCCACATCGGCTAATAACAAACTAAATGAAGAATACACAATGCAAGTGGTTGGACCCATCCCATTAACCCAACTTTTTAAGGTTTTGGGAACAAATGTGGTCAAAGTCTCTTGATGCTACCCTAAAAAAATGCCTACAAAAACAAACTAAGCCTTCGTTTTAAACGATATTTTTCGATGAATTTTTCTTGTCTTAGCAGGAGAGGCCGGGCCATAGTAGTGGAATTGGGCAATGAGATTGAGCTGTTTCATGCTGGCCTTGCTTCTTATTAGTATATTGGGCTCATGTTTGAGAGTGCAAATCTGCAACGATTGAACCATCATAGTTCCATGCTTTCCTTTGTTCAGCATATTATGGTCTGTTGTTGGTTTCAAAACAATTCTAAGCCGTAGTCGCCATCGCTAATATTTACATCATTGGTAGATTTGAATTCCTCTCTTACAATGTATTTTGGGTCTTGTCTGATTGCTTTGATAAACTTATTTGTTCCTAGCATTGCTGTAGGTTCCAACATTTTTTGTTTATGTTCTCCTTTTTGTATTTCTCTTTATTTAATGTAGTTTATCCACTCATATTGTAGGGTGTAGGAAACAATGACCAGAAAGTTCTTGTTCTTGCAGCAACAAACACACCTTATGCTTTAGACCAGGTAAGACAAAAATAATTCTGCTTATATCACCCCATAGAGTCAGCAGGAAGCTATTTTCTCTAATCAATTTGTATTTGCAGGCAATAAGGCGTCGTTTTGATAAGCGTATTTATATTCCACTACCAGATTTGAAGGCCCGCCAACACATGTTTAAGGCAAGGGCAATTTCAATGATTACTCAGTCCTGAATTTTATTGTTATATATAAACCTAGCAAATGGTTTTAACGTGTCATTTTATTTTTTTGGCTTGATAAATTGAGCAGGTGCATCTTGGAGATACTCCTCATAATTTAACTGAAAAGGATTATGAATACTTGGCTAGCAGGACAGAGGGGTTTTCTGGTTCAGATATATCTGTTTGCGTAAGTTTTAATTTCTAATATAAAAACCTGTTTCAATCGCCTTTTACTTGGATGAATTTCTTTTAAAAACTTTTTAATCTCTTCAGGTGAAGGATGTTCTATTTGAACCTGTCCGCAAAACCCAAGATGCTATGTTCTTCTTTAAGAGTCCTGAGGGTATGTGGATCCCATGTGGACCAAAGCAACAGGGCGCAGTTCAAACTACAATGACGGATCTTGCTACAAAAGGACTTGCTTCAAAGGTATTCGAGATACTATAGATTTTGATGGCTGTTGGTTGTATTTTTTTGAAATTGGAGAAATAGGGTTGTGATATTTTTCGACGAGGTTTTTGTACATATCTTTAATTGACATGAGGAAATATTTACCCACCTTAAAACTTATGCAGATCCTTCCACCCCCCATTACAAGAACAGATTTTGAAAAGGTTCTTGCTAGGCAAAGGCCTACAGTAAGCAAAAGTGACCTTGAAGTTCATGAGAGATTCACAAAGGAGTTTGGAGAAGAAGGTTAA

Protein sequence

>MS.gene35394.t1

MYSNFMEQAIEYVKQAVHEDNAGNYSKAFPLYMNALEYFKTHLKYEKNPKIREAITQKFTEYLRRAEEIRAVLDDGGPGPASNGDAAVATRPKSKGKDGGGEGGGGGEGEDPEQAKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVSNLFQMARESAPSIIFVDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGNNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLTEKDYEYLASRTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKSPEGMWIPCGPKQQGAVQTTMTDLATKGLASKILPPPITRTDFEKVLARQRPTVSKSDLEVHERFTKEFGEEG