AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene049185

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049185.t1 MTR_3g098310 96.247 826 19 1 1 814 133 958 0.0 1640
MS.gene049185.t1 MTR_3g098310 96.037 656 14 1 1 644 133 788 0.0 1299
MS.gene049185.t1 MTR_3g498725 50.197 761 351 11 56 809 168 907 0.0 724
MS.gene049185.t1 MTR_3g102830 48.883 761 361 9 56 809 173 912 0.0 709
MS.gene049185.t1 MTR_8g100040 49.014 761 360 9 56 809 172 911 0.0 708
MS.gene049185.t1 MTR_7g012820 43.215 759 344 12 123 813 212 951 0.0 602
MS.gene049185.t1 MTR_7g012820 43.215 759 344 12 123 813 141 880 0.0 602
MS.gene049185.t1 MTR_6g013660 41.337 808 375 13 65 804 168 944 0.0 601
MS.gene049185.t1 MTR_3g106160 42.641 727 341 11 138 800 235 949 0.0 568
MS.gene049185.t1 MTR_4g109450 42.348 758 346 15 113 806 130 860 0.0 559
MS.gene049185.t1 MTR_4g109450 42.637 713 318 15 113 761 130 815 2.79e-175 527
MS.gene049185.t1 MTR_7g028970 39.755 815 391 17 56 807 83 860 2.37e-173 524
MS.gene049185.t1 MTR_3g461000 48.387 341 165 5 472 810 428 759 2.59e-104 340
MS.gene049185.t1 MTR_3g461000 35.958 381 231 3 47 427 72 439 9.40e-70 246
MS.gene049185.t1 MTR_2g099075 39.837 369 203 4 440 807 106 456 2.84e-81 269
MS.gene049185.t1 MTR_2g006950 39.701 335 175 5 440 772 42 351 6.55e-70 242
MS.gene049185.t1 MTR_2g006950 34.483 203 105 4 606 807 380 555 1.15e-29 125
MS.gene049185.t1 MTR_6g048860 48.951 143 72 1 134 276 117 258 1.30e-34 136
MS.gene049185.t1 MTR_1614s0010 40.284 211 108 4 575 783 1 195 5.32e-30 117
MS.gene049185.t1 MTR_1g076440 46.429 140 64 2 557 696 147 275 2.24e-29 119
MS.gene049185.t1 MTR_5g098360 37.069 116 66 2 480 589 53 167 3.49e-16 77.4
MS.gene049185.t1 MTR_7g096480 31.818 154 72 3 653 806 96 216 5.14e-16 79.0
MS.gene049185.t1 MTR_7g096480 34.146 123 48 2 472 594 6 95 7.80e-14 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049185.t1 AT5G51070 65.191 836 271 8 1 821 112 942 0.0 1080
MS.gene049185.t1 AT5G50920 48.777 777 337 11 56 809 171 909 0.0 715
MS.gene049185.t1 AT3G48870 49.017 763 357 10 56 809 160 899 0.0 711
MS.gene049185.t1 AT3G48870 49.017 763 357 10 56 809 191 930 0.0 709
MS.gene049185.t1 AT3G48870 49.017 763 357 10 56 809 191 930 0.0 709
MS.gene049185.t1 AT3G48870 49.017 763 357 10 56 809 191 930 0.0 709
MS.gene049185.t1 AT5G15450 41.418 804 373 12 65 803 166 936 0.0 605
MS.gene049185.t1 AT2G25140 43.681 728 334 11 150 812 238 954 0.0 583
MS.gene049185.t1 AT1G74310 42.958 710 326 13 152 801 162 852 0.0 550
MS.gene049185.t1 AT1G74310 43.284 670 301 13 152 761 162 812 4.09e-173 520
MS.gene049185.t1 AT4G14670 36.624 628 299 13 58 597 6 622 1.97e-107 343
MS.gene049185.t1 AT3G45450 30.675 326 168 10 58 346 5 309 4.97e-31 125

Find 186 sgRNAs with CRISPR-Local

Find 397 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATGAACTGCAGCCTTTA+TGG 0.098364 3.3:+80857282 None:intergenic
TCTTTGGCTGCATGCTATTT+TGG 0.134909 3.3:-80856537 MS.gene049185:CDS
TAACATTCTTCTTCAATTAA+TGG 0.179501 3.3:-80856160 MS.gene049185:CDS
GCAGCAGCAAATCAAATATT+TGG 0.183562 3.3:+80855347 None:intergenic
TCAAACAAAACCACAGTAAA+TGG 0.209228 3.3:+80856213 None:intergenic
ACTTGGAAGGGGTCAGTTTC+AGG 0.235139 3.3:-80858729 MS.gene049185:intron
CTAAAAGCCCGGATGATTAT+TGG 0.258261 3.3:-80857135 MS.gene049185:CDS
GACAACCGGGAGGGGAAATA+AGG 0.261671 3.3:-80858789 MS.gene049185:CDS
GTTCAGGATCAACAAAATTA+TGG 0.267481 3.3:+80860949 None:intergenic
GTTCTGCTAGAATTCTTTAT+AGG 0.277808 3.3:-80860890 MS.gene049185:intron
CATTCAGTGAGCAAGTTATT+AGG 0.278138 3.3:-80856300 MS.gene049185:CDS
TCTATCCTGTTGAGCAGTTC+TGG 0.284706 3.3:+80855705 None:intergenic
TGTTCAGTCCACGCTTAAAA+TGG 0.298769 3.3:-80857098 MS.gene049185:intron
AGAAGAATGTTAAATATATC+TGG 0.315702 3.3:+80856171 None:intergenic
CCAGCTTCACCCAGAAGAAT+TGG 0.326428 3.3:+80859285 None:intergenic
TCAACTTCTCGGCCAATAAC+TGG 0.328094 3.3:+80859354 None:intergenic
GGGCTGATTGATCCAGTTAT+TGG 0.329565 3.3:-80859366 MS.gene049185:CDS
TTCTTTGAACTTCAACTTCT+CGG 0.329689 3.3:+80859343 None:intergenic
GTTAGACATGAGTGAATATA+TGG 0.330047 3.3:-80856328 MS.gene049185:CDS
TGACACTGTCTTCATTGATT+TGG 0.332043 3.3:-80855143 MS.gene049185:CDS
GCCACAGCTGCCAACTGATC+TGG 0.335594 3.3:+80859661 None:intergenic
ACCAACTACGTTGATGATAA+TGG 0.339054 3.3:-80861062 MS.gene049185:CDS
CACGGCGGTTTCAACCTGTT+TGG 0.339833 3.3:-80857764 MS.gene049185:CDS
CTTGGATGTAGGACTATTAA+TGG 0.344112 3.3:-80859030 MS.gene049185:CDS
GAGATCTCGAGTCGGCCTTC+GGG 0.356437 3.3:-80856631 MS.gene049185:CDS
CTTAAATATTATGGTGCATC+TGG 0.366184 3.3:-80856983 MS.gene049185:CDS
TCAGCAGTGAGCTGCTGAAC+TGG 0.366254 3.3:+80856747 None:intergenic
GAGAGCATGCTTAAATATTA+TGG 0.380084 3.3:-80856992 MS.gene049185:CDS
TCTATATCACAAAGGCGTTC+TGG 0.385165 3.3:-80859562 MS.gene049185:intron
GACAAACCAACATCATATAA+TGG 0.386817 3.3:-80855771 MS.gene049185:CDS
CTCACTGCCCGTGCAAGTGT+TGG 0.393374 3.3:-80859387 MS.gene049185:CDS
TTCGTCCAGAACTGCTCAAC+AGG 0.394949 3.3:-80855710 MS.gene049185:CDS
TGATGCAATGAAGATACTTA+TGG 0.395179 3.3:-80857356 MS.gene049185:CDS
ATGAGGTCAATAGCTTTATC+AGG 0.395259 3.3:+80857229 None:intergenic
TTACTATTCTGTGGCCCAAC+TGG 0.398909 3.3:-80856585 MS.gene049185:CDS
TTCAGGAAACGGACATGATA+AGG 0.400120 3.3:-80856350 MS.gene049185:intron
CCAATTCTTCTGGGTGAAGC+TGG 0.408826 3.3:-80859285 MS.gene049185:CDS
CTTCTTCAATTAATGGAAGA+TGG 0.413133 3.3:-80856153 MS.gene049185:CDS
CTTGTTCAATCAGGGACAAC+CGG 0.414239 3.3:-80858803 MS.gene049185:CDS
GTTCACACACTTGTTCAATC+AGG 0.415130 3.3:-80858812 MS.gene049185:CDS
AAACTAAGGGAACGTGTGAT+TGG 0.431441 3.3:-80856693 MS.gene049185:CDS
AACTGAACTAGCAAAGTCTT+TGG 0.432809 3.3:-80856553 MS.gene049185:CDS
TGGCCATCTTACCGATTCTC+AGG 0.433088 3.3:-80856133 MS.gene049185:intron
ATTTCTCTCCAATAATCATC+CGG 0.433200 3.3:+80857127 None:intergenic
AGAGATCTCGAGTCGGCCTT+CGG 0.433232 3.3:-80856632 MS.gene049185:CDS
TTCTGGGTGAAGCTGGAGTT+GGG 0.435845 3.3:-80859278 MS.gene049185:CDS
CTTCTGGGTGAAGCTGGAGT+TGG 0.438875 3.3:-80859279 MS.gene049185:CDS
CAGCAAGATACATAGTTGAT+AGG 0.439208 3.3:-80857258 MS.gene049185:CDS
AGTCAAGGACCTTGTCTGTA+AGG 0.440929 3.3:-80855272 MS.gene049185:CDS
AACAGCTATTGCAGAGGGAC+TGG 0.445401 3.3:-80859253 MS.gene049185:CDS
CTCGGCTCATCAATCCAAAC+AGG 0.446079 3.3:+80857750 None:intergenic
TGCTGCTGCAAGACGTGAAA+AGG 0.453555 3.3:-80855333 MS.gene049185:CDS
ACTGGCAATTCTTATTTCTC+AGG 0.454435 3.3:-80859235 MS.gene049185:CDS
TCACTGCCCGTGCAAGTGTT+GGG 0.455417 3.3:-80859386 MS.gene049185:CDS
AAGAAGTCTTCTGTTAGATC+TGG 0.455467 3.3:-80856721 MS.gene049185:CDS
AGCCAGGTTATGTGTCCAAT+GGG 0.456669 3.3:-80859597 MS.gene049185:CDS
TTCTGTGGCCCAACTGGCGT+TGG 0.456768 3.3:-80856579 MS.gene049185:CDS
GCAAGCAATGCTTCAGCCAA+TGG 0.458378 3.3:+80855184 None:intergenic
GGGGTCTAGTGCCATTGCTA+AGG 0.463476 3.3:-80855829 MS.gene049185:CDS
AAAAGCAATCCAATTCTTCT+GGG 0.464852 3.3:-80859294 MS.gene049185:CDS
ACAGAATAGTAAAGTTGCTA+TGG 0.465089 3.3:+80856596 None:intergenic
ACAGTTGCTTCCCTCTGGTC+AGG 0.465119 3.3:-80856774 MS.gene049185:CDS
CACCTCAAAATCAATTCCTC+GGG 0.465538 3.3:+80855303 None:intergenic
TTCAATCCATTATATGATGT+TGG 0.467114 3.3:+80855765 None:intergenic
ATAAAAGATATAATAGAGTC+AGG 0.467220 3.3:-80858960 MS.gene049185:intron
GCTAGAGATGGTAGAGAGCC+AGG 0.468940 3.3:-80859613 MS.gene049185:CDS
TAGATCTGGATAATAAACTA+AGG 0.469027 3.3:-80856707 MS.gene049185:CDS
GACAAAACGTGTCATGTCCT+TGG 0.472119 3.3:-80859048 MS.gene049185:CDS
GATGTAGGACTATTAATGGC+TGG 0.472478 3.3:-80859026 MS.gene049185:CDS
TAAAGTTGCTATGGGTCTAC+CGG 0.474304 3.3:+80856605 None:intergenic
CCCAGATCAGTTGGCAGCTG+TGG 0.474446 3.3:-80859662 MS.gene049185:CDS
TGCTTAAACCTTCACTTGGA+AGG 0.478401 3.3:-80858742 MS.gene049185:CDS
CAATCAGGGACAACCGGGAG+GGG 0.479272 3.3:-80858797 MS.gene049185:CDS
CTAATAACTTGCTCACTGAA+TGG 0.479808 3.3:+80856301 None:intergenic
GGGAGGGGAAATAAGGGTTC+TGG 0.480130 3.3:-80858782 MS.gene049185:CDS
CTACCACTATTGATGAATAC+AGG 0.481152 3.3:-80857815 MS.gene049185:CDS
GCAACTGTTGCTATATGATC+AGG 0.483203 3.3:+80856789 None:intergenic
ACAACCGGGAGGGGAAATAA+GGG 0.483340 3.3:-80858788 MS.gene049185:CDS
GTTATGTTGGTTATGGAGAA+GGG 0.484795 3.3:-80856266 MS.gene049185:CDS
TCCATTATCATCAACGTAGT+TGG 0.485415 3.3:+80861061 None:intergenic
TCTGTGGCCCAACTGGCGTT+GGG 0.486174 3.3:-80856578 MS.gene049185:CDS
CAAGCAATGCTTCAGCCAAT+GGG 0.488172 3.3:+80855185 None:intergenic
TCTCTTCACAGATCTAGAAA+TGG 0.490279 3.3:+80856650 None:intergenic
GAGACAAATCGTTCTCAAAA+CGG 0.492726 3.3:-80861152 MS.gene049185:CDS
AGAACCCTTATTTCCCCTCC+CGG 0.496013 3.3:+80858784 None:intergenic
GATAGACACACCAATAGAAA+AGG 0.496212 3.3:+80859201 None:intergenic
TATAACAAGGGTGTTACCAT+TGG 0.496267 3.3:+80855117 None:intergenic
GCTTAAACCTTCACTTGGAA+GGG 0.497310 3.3:-80858741 MS.gene049185:CDS
ATATACAGAAGATGCCATAA+AGG 0.500415 3.3:-80857296 MS.gene049185:CDS
TCTCCATAACCAACATAACC+TGG 0.501731 3.3:+80856270 None:intergenic
GAGGTCTAGCACCATATGTT+GGG 0.502338 3.3:+80855239 None:intergenic
CCACAGCTGCCAACTGATCT+GGG 0.502623 3.3:+80859662 None:intergenic
TAGCAACAGTTGCTTCCCTC+TGG 0.507727 3.3:-80856779 MS.gene049185:CDS
GTACCAAAAGAAAACGGAAC+AGG 0.507840 3.3:+80861017 None:intergenic
ATGTAGGACTATTAATGGCT+GGG 0.511098 3.3:-80859025 MS.gene049185:CDS
AAACTTAATTGCAAACCCAT+TGG 0.514028 3.3:-80855200 MS.gene049185:CDS
GAAGGCTATGACCCAACATA+TGG 0.515298 3.3:-80855250 MS.gene049185:CDS
TACGCACACCATATCATGCT+TGG 0.519026 3.3:-80861194 None:intergenic
AAGCCTGTATTCATCAATAG+TGG 0.519791 3.3:+80857812 None:intergenic
CGAGTCGGCCTTCGGGATCC+CGG 0.521425 3.3:-80856624 MS.gene049185:CDS
GCATCGGCAAACCTGAGAAT+CGG 0.527994 3.3:+80856122 None:intergenic
GATGCAATGAAGATACTTAT+GGG 0.528454 3.3:-80857355 MS.gene049185:CDS
ATCTGAAATGAAGAAACCTA+TGG 0.528568 3.3:+80855794 None:intergenic
CATATGGTGCTAGACCTCTC+AGG 0.531368 3.3:-80855234 MS.gene049185:CDS
AAACCTGAGAATCGGTAAGA+TGG 0.531639 3.3:+80856130 None:intergenic
ACACCTCAAAATCAATTCCT+CGG 0.532915 3.3:+80855302 None:intergenic
TCATCCCCTTGAAAAGCCAC+AGG 0.534299 3.3:-80855667 MS.gene049185:intron
TACTTCCTGCTTCATCAATG+AGG 0.539893 3.3:+80857212 None:intergenic
AGAGGTCTAGCACCATATGT+TGG 0.540703 3.3:+80855238 None:intergenic
GGTTATGTTGGTTATGGAGA+AGG 0.541808 3.3:-80856267 MS.gene049185:CDS
GGGTCTAGTGCCATTGCTAA+GGG 0.542537 3.3:-80855828 MS.gene049185:CDS
CTTAAACCTTCACTTGGAAG+GGG 0.543263 3.3:-80858740 MS.gene049185:CDS
ATTGACCTCATTGATGAAGC+AGG 0.544458 3.3:-80857217 MS.gene049185:CDS
CAATCAGCCCAACACTTGCA+CGG 0.544552 3.3:+80859379 None:intergenic
AAAAGAGAGAGGAGAGCTAG+AGG 0.545345 3.3:-80859000 MS.gene049185:CDS
TTGCATACTCTCTAAAAGCC+CGG 0.546522 3.3:-80857146 MS.gene049185:CDS
ATATAAAGTGCAACCTCACT+CGG 0.546762 3.3:+80857732 None:intergenic
AAGGACCTTGTCTGTAAGGA+AGG 0.546851 3.3:-80855268 MS.gene049185:CDS
AAAATCAATTCCTCGGGGCA+TGG 0.547293 3.3:+80855309 None:intergenic
CGTGTCATGTCCTTGGATGT+AGG 0.548440 3.3:-80859041 MS.gene049185:CDS
TGAGTCAAGTATGAGTTCAC+TGG 0.553540 3.3:+80856949 None:intergenic
CGTTTAGTACCAAAAGAAAA+CGG 0.553800 3.3:+80861011 None:intergenic
AACTGACCCCTTCCAAGTGA+AGG 0.554059 3.3:+80858734 None:intergenic
CAGAATAGTAAAGTTGCTAT+GGG 0.554764 3.3:+80856597 None:intergenic
GAGCCAGGTTATGTGTCCAA+TGG 0.555649 3.3:-80859598 MS.gene049185:CDS
CGGGTCAAACCCAGATCAGT+TGG 0.556987 3.3:-80859671 MS.gene049185:CDS
TACTCAAGGGTGACTTGTGT+CGG 0.559111 3.3:+80855066 None:intergenic
CTCCATAACCAACATAACCT+GGG 0.561726 3.3:+80856271 None:intergenic
TTTCTCTCCAATAATCATCC+GGG 0.562344 3.3:+80857128 None:intergenic
AAAGCAACGAAAATATGTTC+AGG 0.563495 3.3:+80860933 None:intergenic
AACTGGAATTCCTGACCAGA+GGG 0.563796 3.3:+80856764 None:intergenic
CTTCTGTATATCTGCACTTG+TGG 0.566189 3.3:+80857308 None:intergenic
TTCACACACTTGTTCAATCA+GGG 0.566651 3.3:-80858811 MS.gene049185:CDS
GCTTTGATGAAAGTTGATGA+TGG 0.573069 3.3:-80860915 MS.gene049185:CDS
AATTTGCTTAAACCTTCACT+TGG 0.579870 3.3:-80858746 MS.gene049185:CDS
AATCAGCCCAACACTTGCAC+GGG 0.580208 3.3:+80859380 None:intergenic
GATCAAGCTGATTTATAACA+AGG 0.584174 3.3:+80855104 None:intergenic
TTCATTGATTTGGATGCCAA+TGG 0.585414 3.3:-80855133 MS.gene049185:CDS
TTGTTCAATCAGGGACAACC+GGG 0.588641 3.3:-80858802 MS.gene049185:CDS
TATGTTGGTTATGGAGAAGG+GGG 0.590352 3.3:-80856264 MS.gene049185:CDS
TCAATCAGGGACAACCGGGA+GGG 0.591333 3.3:-80858798 MS.gene049185:CDS
AAGGGTCGACACAACTCCAT+AGG 0.595796 3.3:-80855810 MS.gene049185:CDS
GGAACGTGTGATTGGACAAG+AGG 0.597583 3.3:-80856685 MS.gene049185:CDS
CTTGCTGAAAAGTGCAAGGA+AGG 0.599268 3.3:-80855166 MS.gene049185:CDS
GTTTGCAATTAAGTTTACAA+TGG 0.599993 3.3:+80855207 None:intergenic
TGTAGGACTATTAATGGCTG+GGG 0.603871 3.3:-80859024 MS.gene049185:CDS
AGATCTGGATAATAAACTAA+GGG 0.604041 3.3:-80856706 MS.gene049185:CDS
TGAGGTGTCTGAATCAGTCA+AGG 0.607039 3.3:-80855287 MS.gene049185:CDS
TGGGTCTACCGGGATCCCGA+AGG 0.609108 3.3:+80856616 None:intergenic
GGTGGTGATGACTTCAAATG+TGG 0.611159 3.3:-80855850 MS.gene049185:CDS
CATTAATAGTCCTACATCCA+AGG 0.615573 3.3:+80859031 None:intergenic
GCTCAACAGGATAGATGAAG+TGG 0.616515 3.3:-80855697 MS.gene049185:CDS
ATAGCAACTTTACTATTCTG+TGG 0.617864 3.3:-80856594 MS.gene049185:CDS
TAGAAGAAAACCATTTACTG+TGG 0.618481 3.3:-80856223 MS.gene049185:CDS
ATATAATGGATTGAAATCGA+TGG 0.619461 3.3:-80855757 MS.gene049185:CDS
TTATGGTGCATCTGGCATTG+AGG 0.619554 3.3:-80856975 MS.gene049185:CDS
TTGGTTGAATCATTGAGATG+AGG 0.619768 3.3:+80861080 None:intergenic
CATAGCCTTCCTTACAGACA+AGG 0.620402 3.3:+80855263 None:intergenic
ACGTGTGATTGGACAAGAGG+AGG 0.625107 3.3:-80856682 MS.gene049185:CDS
ATCAAGCTGATTTATAACAA+GGG 0.625901 3.3:+80855105 None:intergenic
GGGAAAACAGCTATTGCAGA+GGG 0.636174 3.3:-80859258 MS.gene049185:CDS
GTGGTGATGACTTCAAATGT+GGG 0.637406 3.3:-80855849 MS.gene049185:CDS
TTATGTTGGTTATGGAGAAG+GGG 0.637629 3.3:-80856265 MS.gene049185:CDS
ATTGCTTGCTGAAAAGTGCA+AGG 0.637883 3.3:-80855170 MS.gene049185:CDS
TTCAATCAGGGACAACCGGG+AGG 0.637993 3.3:-80858799 MS.gene049185:CDS
GAACTGGAATTCCTGACCAG+AGG 0.642699 3.3:+80856763 None:intergenic
ATGGCTGGGGCAAAAGAGAG+AGG 0.645640 3.3:-80859011 MS.gene049185:CDS
AAAGTTGCTATGGGTCTACC+GGG 0.647341 3.3:+80856606 None:intergenic
TGCTCTATCACAATTCTGCG+TGG 0.649091 3.3:-80859412 MS.gene049185:CDS
TTTACAATGGCTCTCCTGAG+AGG 0.650300 3.3:+80855220 None:intergenic
CCAGGTTATGTGTCCAATGG+GGG 0.650317 3.3:-80859595 MS.gene049185:CDS
CGATGGTAATTGAAGAACTG+AGG 0.650720 3.3:-80855740 MS.gene049185:CDS
TCCATAACCAACATAACCTG+GGG 0.651186 3.3:+80856272 None:intergenic
GCCAGGTTATGTGTCCAATG+GGG 0.659821 3.3:-80859596 MS.gene049185:CDS
AAAAGGATAAGGCTTTGGCA+CGG 0.663550 3.3:-80857782 MS.gene049185:CDS
TTGGATTGATGAGCCGAGTG+AGG 0.663720 3.3:-80857745 MS.gene049185:intron
GTTGTGTCGACCCTTAGCAA+TGG 0.675286 3.3:+80855818 None:intergenic
TGGGAAAACAGCTATTGCAG+AGG 0.677479 3.3:-80859259 MS.gene049185:CDS
ACAACAAATCTATATCACAA+AGG 0.686685 3.3:-80859570 MS.gene049185:CDS
TGGTGATGACTTCAAATGTG+GGG 0.688027 3.3:-80855848 MS.gene049185:CDS
AGGATAAGGCTTTGGCACGG+CGG 0.694664 3.3:-80857779 MS.gene049185:CDS
CAACAGGATAGATGAAGTGG+TGG 0.695003 3.3:-80855694 MS.gene049185:CDS
ACCTCAAAATCAATTCCTCG+GGG 0.719499 3.3:+80855304 None:intergenic
TCTGTGAAGAGATCTCGAGT+CGG 0.722132 3.3:-80856639 MS.gene049185:CDS
GTGAAAAGGACCATGCCCCG+AGG 0.751275 3.3:-80855319 MS.gene049185:CDS
CCATAACCAACATAACCTGG+GGG 0.752062 3.3:+80856273 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAATAAACATAAAAATTT+AGG + chr3.3:80860329-80860348 None:intergenic 10.0%
!! ACAATAAACATAAAAATTTA+GGG + chr3.3:80860328-80860347 None:intergenic 10.0%
!! AACAAAAGAAAAACAAATAT+TGG + chr3.3:80856420-80856439 None:intergenic 15.0%
!! ACTTATAATATATTTCCATT+TGG - chr3.3:80855406-80855425 MS.gene049185:intron 15.0%
!! AGATAGAAACATATTAATTA+AGG + chr3.3:80857135-80857154 None:intergenic 15.0%
!! AGATCAAATTATGATTAAAA+TGG + chr3.3:80858841-80858860 None:intergenic 15.0%
!! CAATTTAAATTCAACTTTAA+AGG - chr3.3:80855856-80855875 MS.gene049185:CDS 15.0%
!! TAGTTTGAAAAATATTCTTT+GGG - chr3.3:80856306-80856325 MS.gene049185:CDS 15.0%
!! TCTTTGCAATAAATAATTAA+GGG + chr3.3:80858673-80858692 None:intergenic 15.0%
!! TTAAATTTAACTGCTTAAAA+CGG + chr3.3:80860747-80860766 None:intergenic 15.0%
!! TTAAGATTGTTATAGAAAAA+AGG - chr3.3:80858725-80858744 MS.gene049185:intron 15.0%
!!! ATTATTTAGTCATTTTTGTT+TGG - chr3.3:80860700-80860719 MS.gene049185:intron 15.0%
!! AAGCAGTTAAATTTAAATAC+TGG - chr3.3:80860751-80860770 MS.gene049185:intron 20.0%
!! AGAAGAATGTTAAATATATC+TGG + chr3.3:80860080-80860099 None:intergenic 20.0%
!! AGTTTCATTTAAAAATGCAT+TGG - chr3.3:80860377-80860396 MS.gene049185:intron 20.0%
!! AGTTTGAAAAATATTCTTTG+GGG - chr3.3:80856307-80856326 MS.gene049185:CDS 20.0%
!! ATAAAAGATATAATAGAGTC+AGG - chr3.3:80857288-80857307 MS.gene049185:CDS 20.0%
!! ATAAATATTCAAGTATCACT+TGG + chr3.3:80857587-80857606 None:intergenic 20.0%
!! ATATATTTCCATTTGGTATT+TGG - chr3.3:80855413-80855432 MS.gene049185:intron 20.0%
!! ATGTTTATTGTTTGAAAAAC+TGG - chr3.3:80860337-80860356 MS.gene049185:intron 20.0%
!! CTAGTTTGAAAAATATTCTT+TGG - chr3.3:80856305-80856324 MS.gene049185:CDS 20.0%
!! CTCTTTGCAATAAATAATTA+AGG + chr3.3:80858674-80858693 None:intergenic 20.0%
!! TAACATTCTTCTTCAATTAA+TGG - chr3.3:80860088-80860107 MS.gene049185:intron 20.0%
!!! ATGAATTTTTCTTGAATAGT+TGG - chr3.3:80858258-80858277 MS.gene049185:intron 20.0%
!!! CTTTTATTAATTTTGTAACG+CGG + chr3.3:80857275-80857294 None:intergenic 20.0%
!!! TCCATATATTTTCATGTTTA+AGG - chr3.3:80858031-80858050 MS.gene049185:intron 20.0%
!!! TGATCATTTTTGTATAAGAT+GGG - chr3.3:80858316-80858335 MS.gene049185:intron 20.0%
!!! TGTTTATGATTTGATTTTGA+TGG - chr3.3:80856756-80856775 MS.gene049185:CDS 20.0%
!!! TTAATATGTTTCTATCTACT+TGG - chr3.3:80857138-80857157 MS.gene049185:CDS 20.0%
!!! TTTGTTTTTCTTTTGTTTTG+TGG - chr3.3:80856423-80856442 MS.gene049185:intron 20.0%
!!! TTTTGTAATTTTAATTGGGA+GGG - chr3.3:80858152-80858171 MS.gene049185:intron 20.0%
!!! TTTTTGTAATTTTAATTGGG+AGG - chr3.3:80858151-80858170 MS.gene049185:intron 20.0%
!!! TTTTTTTGGCATTAATAATG+AGG - chr3.3:80859760-80859779 MS.gene049185:intron 20.0%
! AACTTATCGAAGTACATATT+TGG + chr3.3:80855961-80855980 None:intergenic 25.0%
! AAGTTGTCTTTATGAAATAC+TGG - chr3.3:80857792-80857811 MS.gene049185:CDS 25.0%
! ACAACAAATCTATATCACAA+AGG - chr3.3:80856678-80856697 MS.gene049185:CDS 25.0%
! ACTAGCAATTGTTTATTTGA+TGG + chr3.3:80857626-80857645 None:intergenic 25.0%
! AGAAACTTATTTGAACCAAA+TGG - chr3.3:80855527-80855546 MS.gene049185:intron 25.0%
! AGAGAAAGTTTCATGTTTAA+AGG + chr3.3:80860187-80860206 None:intergenic 25.0%
! AGATCTGGATAATAAACTAA+GGG - chr3.3:80859542-80859561 MS.gene049185:intron 25.0%
! AGCATACACATAAAAAAACT+TGG + chr3.3:80860809-80860828 None:intergenic 25.0%
! AGTTGTCTTTATGAAATACT+GGG - chr3.3:80857793-80857812 MS.gene049185:CDS 25.0%
! ATATGTACTTCGATAAGTTT+CGG - chr3.3:80855962-80855981 MS.gene049185:intron 25.0%
! ATCAAATGTACCAAGTTTAT+TGG - chr3.3:80858757-80858776 MS.gene049185:CDS 25.0%
! ATTCAAGAAAAATTCATCAG+AGG + chr3.3:80858255-80858274 None:intergenic 25.0%
! CATTTCTATATCTTCCTTTA+CGG - chr3.3:80860210-80860229 MS.gene049185:intron 25.0%
! GAGAAAGTTTCATGTTTAAA+GGG + chr3.3:80860186-80860205 None:intergenic 25.0%
! GATGTGAATCTTAATTTACT+AGG - chr3.3:80860150-80860169 MS.gene049185:intron 25.0%
! GCCTTAAACATGAAAATATA+TGG + chr3.3:80858035-80858054 None:intergenic 25.0%
! GTTCAATTATATTATGCAGT+CGG - chr3.3:80858280-80858299 MS.gene049185:intron 25.0%
! GTTTGCAATTAAGTTTACAA+TGG + chr3.3:80861044-80861063 None:intergenic 25.0%
! TAGATCTGGATAATAAACTA+AGG - chr3.3:80859541-80859560 MS.gene049185:intron 25.0%
! TGGTTCAAATAAGTTTCTTT+AGG + chr3.3:80855525-80855544 None:intergenic 25.0%
! TTAAACATGAAACTTTCTCT+TGG - chr3.3:80860187-80860206 MS.gene049185:intron 25.0%
! TTATTCATAGTGACAAGTTA+TGG + chr3.3:80858386-80858405 None:intergenic 25.0%
! TTCAATCCATTATATGATGT+TGG + chr3.3:80860486-80860505 None:intergenic 25.0%
! TTCATTTAAAAATGCATTGG+TGG - chr3.3:80860380-80860399 MS.gene049185:intron 25.0%
!! ACAGTTACTTTGAAAAATGT+TGG + chr3.3:80857716-80857735 None:intergenic 25.0%
!! ATCAAGCTGATTTATAACAA+GGG + chr3.3:80861146-80861165 None:intergenic 25.0%
!! ATCTAAAATCGTAAGACAAA+TGG + chr3.3:80856145-80856164 None:intergenic 25.0%
!! CAGTTACTTTGAAAAATGTT+GGG + chr3.3:80857715-80857734 None:intergenic 25.0%
!! TTTTTCTCATATTCATTCTC+TGG - chr3.3:80856796-80856815 MS.gene049185:CDS 25.0%
!!! ATATAATGGATTGAAATCGA+TGG - chr3.3:80860491-80860510 MS.gene049185:intron 25.0%
!!! GAACTTTTTAAGAATAATGC+TGG - chr3.3:80855688-80855707 MS.gene049185:CDS 25.0%
!!! GTGATCATTTTTGTATAAGA+TGG - chr3.3:80858315-80858334 MS.gene049185:intron 25.0%
!!! GTGTTCTTTTTTCATCTTAA+AGG + chr3.3:80859077-80859096 None:intergenic 25.0%
!!! TTCTTTGGGGTAAAATTTTA+AGG - chr3.3:80856320-80856339 MS.gene049185:CDS 25.0%
!!! TTGAAAAACTGGTTCTAATA+GGG - chr3.3:80860348-80860367 MS.gene049185:intron 25.0%
!!! TTTGAAAAACTGGTTCTAAT+AGG - chr3.3:80860347-80860366 MS.gene049185:intron 25.0%
AAAAAGCAATCCAATTCTTC+TGG - chr3.3:80856953-80856972 MS.gene049185:CDS 30.0%
AAAAGCAATCCAATTCTTCT+GGG - chr3.3:80856954-80856973 MS.gene049185:CDS 30.0%
AAACTAGTTATGCAACTCAA+AGG + chr3.3:80856292-80856311 None:intergenic 30.0%
AAACTTAATTGCAAACCCAT+TGG - chr3.3:80861048-80861067 MS.gene049185:CDS 30.0%
AAAGCAACGAAAATATGTTC+AGG + chr3.3:80855318-80855337 None:intergenic 30.0%
AATACTCTCCAAATACCAAA+TGG + chr3.3:80855424-80855443 None:intergenic 30.0%
ACAGAATAGTAAAGTTGCTA+TGG + chr3.3:80859655-80859674 None:intergenic 30.0%
ACCAAACAAACCAATAAACT+TGG + chr3.3:80858770-80858789 None:intergenic 30.0%
ACGTATAAGATTAAGGTTAG+AGG - chr3.3:80857647-80857666 MS.gene049185:intron 30.0%
AGTTATATTCAACAACGCTA+AGG - chr3.3:80858071-80858090 MS.gene049185:intron 30.0%
ATAGCAACTTTACTATTCTG+TGG - chr3.3:80859654-80859673 MS.gene049185:CDS 30.0%
ATATACAGAAGATGCCATAA+AGG - chr3.3:80858952-80858971 MS.gene049185:intron 30.0%
ATGAACTATGTCATATTGTC+CGG + chr3.3:80856026-80856045 None:intergenic 30.0%
ATTAAGATTCACATCAGCAT+CGG + chr3.3:80860145-80860164 None:intergenic 30.0%
ATTGCAAAGAGAGAAATAGA+TGG - chr3.3:80858683-80858702 MS.gene049185:intron 30.0%
ATTTCTCTCCAATAATCATC+CGG + chr3.3:80859124-80859143 None:intergenic 30.0%
CAAAGTCAATCTCAATTTGT+CGG - chr3.3:80856210-80856229 MS.gene049185:CDS 30.0%
CAAGATTAGCATTTAACATC+TGG - chr3.3:80857742-80857761 MS.gene049185:intron 30.0%
CAGAATAGTAAAGTTGCTAT+GGG + chr3.3:80859654-80859673 None:intergenic 30.0%
CATACTATCATTTCAGGAAA+CGG - chr3.3:80859887-80859906 MS.gene049185:intron 30.0%
CGTTTAGTACCAAAAGAAAA+CGG + chr3.3:80855240-80855259 None:intergenic 30.0%
CTTAAATATTATGGTGCATC+TGG - chr3.3:80859265-80859284 MS.gene049185:CDS 30.0%
CTTCTTCAATTAATGGAAGA+TGG - chr3.3:80860095-80860114 MS.gene049185:intron 30.0%
GACAAACCAACATCATATAA+TGG - chr3.3:80860477-80860496 MS.gene049185:intron 30.0%
GAGTTGTGTTAATATATGTG+TGG - chr3.3:80857339-80857358 MS.gene049185:CDS 30.0%
GATAACCAAGAAACAAATGT+TGG - chr3.3:80855634-80855653 MS.gene049185:intron 30.0%
GATGCAATGAAGATACTTAT+GGG - chr3.3:80858893-80858912 MS.gene049185:intron 30.0%
GCTAGTAACGTATAAGATTA+AGG - chr3.3:80857640-80857659 MS.gene049185:intron 30.0%
GTTAGACATGAGTGAATATA+TGG - chr3.3:80859920-80859939 MS.gene049185:intron 30.0%
GTTCAGGATCAACAAAATTA+TGG + chr3.3:80855302-80855321 None:intergenic 30.0%
GTTCTGCTAGAATTCTTTAT+AGG - chr3.3:80855358-80855377 MS.gene049185:intron 30.0%
GTTTCTTGGTTATCATTGAT+TGG + chr3.3:80855628-80855647 None:intergenic 30.0%
TAATAGACTCAATGCTTAGA+TGG - chr3.3:80857832-80857851 MS.gene049185:intron 30.0%
TAGAAGAAAACCATTTACTG+TGG - chr3.3:80860025-80860044 MS.gene049185:intron 30.0%
TAGTCTGACAACCAATTAAA+CGG + chr3.3:80855782-80855801 None:intergenic 30.0%
TATGCAAATGATTTCAGACT+CGG - chr3.3:80856557-80856576 MS.gene049185:CDS 30.0%
TCAAACAAAACCACAGTAAA+TGG + chr3.3:80860038-80860057 None:intergenic 30.0%
TCCTGAAATGATAGTATGAA+AGG + chr3.3:80859885-80859904 None:intergenic 30.0%
TGATGCAATGAAGATACTTA+TGG - chr3.3:80858892-80858911 MS.gene049185:intron 30.0%
TGTGCATATCTATCTAGATT+TGG - chr3.3:80859387-80859406 MS.gene049185:CDS 30.0%
TTCTTTGAACTTCAACTTCT+CGG + chr3.3:80856908-80856927 None:intergenic 30.0%
TTGCATACTAGCAACATTAA+TGG + chr3.3:80856544-80856563 None:intergenic 30.0%
! AATAGCCAACATTTGTTTCT+TGG + chr3.3:80855642-80855661 None:intergenic 30.0%
! AATTTGCTTAAACCTTCACT+TGG - chr3.3:80857502-80857521 MS.gene049185:intron 30.0%
! ATCTGAAATGAAGAAACCTA+TGG + chr3.3:80860457-80860476 None:intergenic 30.0%
! CTGACATGTTATTGTGTTTT+AGG - chr3.3:80859421-80859440 MS.gene049185:CDS 30.0%
! GAGAGCATGCTTAAATATTA+TGG - chr3.3:80859256-80859275 MS.gene049185:CDS 30.0%
! GATCAAGCTGATTTATAACA+AGG + chr3.3:80861147-80861166 None:intergenic 30.0%
! TCGTAAGACAAATGGTATTT+TGG + chr3.3:80856137-80856156 None:intergenic 30.0%
! TGGTTTTCTTCTAATAGCTT+CGG + chr3.3:80860018-80860037 None:intergenic 30.0%
! TTCTAGTACATGTAACCTTT+TGG + chr3.3:80857915-80857934 None:intergenic 30.0%
!! ACCAAGTTTATTGGTTTGTT+TGG - chr3.3:80858766-80858785 MS.gene049185:CDS 30.0%
!! ATACAGGCTTCATTTTGAAA+AGG - chr3.3:80858449-80858468 MS.gene049185:intron 30.0%
!! GATTTGATTTTGATGGTTGA+AGG - chr3.3:80856763-80856782 MS.gene049185:CDS 30.0%
!! GCTTCATTTTGAAAAGGATA+AGG - chr3.3:80858455-80858474 MS.gene049185:intron 30.0%
!! GTTTTAGGTGTATAGAAGTT+AGG - chr3.3:80859436-80859455 MS.gene049185:intron 30.0%
!! TTTTGAAAAGGATAAGGCTT+TGG - chr3.3:80858461-80858480 MS.gene049185:intron 30.0%
!!! ATCTAGATTTGGTTTTTGAG+TGG - chr3.3:80859398-80859417 MS.gene049185:CDS 30.0%
!!! CATTAGCTTTTTAAAGAGTG+TGG - chr3.3:80856373-80856392 MS.gene049185:intron 30.0%
!!! TGTCGGTGAAACAATTTTTT+GGG - chr3.3:80856227-80856246 MS.gene049185:CDS 30.0%
!!! TTGGAGAGTATTGTTGTTTT+TGG - chr3.3:80855432-80855451 MS.gene049185:intron 30.0%
!!! TTGGATTGCTTTTTGTCTTT+CGG + chr3.3:80856947-80856966 None:intergenic 30.0%
!!! TTGTCGGTGAAACAATTTTT+TGG - chr3.3:80856226-80856245 MS.gene049185:CDS 30.0%
!!! TTTCTTGCCTTTTGTTTTAG+CGG + chr3.3:80856723-80856742 None:intergenic 30.0%
AAACTAGCAGATGAGATTAC+AGG + chr3.3:80857556-80857575 None:intergenic 35.0%
AACTAGCAGATGAGATTACA+GGG + chr3.3:80857555-80857574 None:intergenic 35.0%
AACTGAACTAGCAAAGTCTT+TGG - chr3.3:80859695-80859714 MS.gene049185:intron 35.0%
AAGAAGTCTTCTGTTAGATC+TGG - chr3.3:80859527-80859546 MS.gene049185:intron 35.0%
AAGCCTGTATTCATCAATAG+TGG + chr3.3:80858439-80858458 None:intergenic 35.0%
ACACCTCAAAATCAATTCCT+CGG + chr3.3:80860949-80860968 None:intergenic 35.0%
ACTCAAAGGACTTATAAACC+AGG + chr3.3:80856278-80856297 None:intergenic 35.0%
AGATATGAGTGAGTGTTAAC+TGG - chr3.3:80857858-80857877 MS.gene049185:intron 35.0%
AGTTGACATTTCTTACTCTC+AGG - chr3.3:80859228-80859247 MS.gene049185:CDS 35.0%
ATAAAATTCCAACAGCAGAG+AGG + chr3.3:80858129-80858148 None:intergenic 35.0%
ATATAAAGTGCAACCTCACT+CGG + chr3.3:80858519-80858538 None:intergenic 35.0%
ATATTTGGAAACACAGCCAA+TGG + chr3.3:80855946-80855965 None:intergenic 35.0%
ATGCAAAGAACATCGGAATA+CGG + chr3.3:80859191-80859210 None:intergenic 35.0%
ATGCAAATGATTTCAGACTC+GGG - chr3.3:80856558-80856577 MS.gene049185:CDS 35.0%
ATGTAGGACTATTAATGGCT+GGG - chr3.3:80857223-80857242 MS.gene049185:CDS 35.0%
CAGCAAGATACATAGTTGAT+AGG - chr3.3:80858990-80859009 MS.gene049185:CDS 35.0%
CATTAATAGTCCTACATCCA+AGG + chr3.3:80857220-80857239 None:intergenic 35.0%
CATTCAGTGAGCAAGTTATT+AGG - chr3.3:80859948-80859967 MS.gene049185:intron 35.0%
CATTTCAGAACATCGAAAAG+AGG + chr3.3:80859807-80859826 None:intergenic 35.0%
CTACCACTATTGATGAATAC+AGG - chr3.3:80858433-80858452 MS.gene049185:intron 35.0%
CTTGGATGTAGGACTATTAA+TGG - chr3.3:80857218-80857237 MS.gene049185:CDS 35.0%
GAGACAAATCGTTCTCAAAA+CGG - chr3.3:80855096-80855115 MS.gene049185:CDS 35.0%
GATAGACACACCAATAGAAA+AGG + chr3.3:80857050-80857069 None:intergenic 35.0%
GCAGCAGCAAATCAAATATT+TGG + chr3.3:80860904-80860923 None:intergenic 35.0%
GCATTTAACATCTGGAAAGT+AGG - chr3.3:80857750-80857769 MS.gene049185:CDS 35.0%
GCCTTTCATACTATCATTTC+AGG - chr3.3:80859881-80859900 MS.gene049185:intron 35.0%
GGACAATATGACATAGTTCA+TGG - chr3.3:80856025-80856044 MS.gene049185:intron 35.0%
TACAAAAGCGACAGTTACAA+AGG + chr3.3:80858577-80858596 None:intergenic 35.0%
TCAAGTATCACTTGGAACAA+AGG + chr3.3:80857579-80857598 None:intergenic 35.0%
TCCATTATCATCAACGTAGT+TGG + chr3.3:80855190-80855209 None:intergenic 35.0%
TCTCTTCACAGATCTAGAAA+TGG + chr3.3:80859601-80859620 None:intergenic 35.0%
TGAGGGCAAATTTGTATGTT+CGG - chr3.3:80857971-80857990 MS.gene049185:intron 35.0%
TGTCTTTATGAAATACTGGG+AGG - chr3.3:80857796-80857815 MS.gene049185:CDS 35.0%
TTAACATCTGGAAAGTAGGA+AGG - chr3.3:80857754-80857773 MS.gene049185:CDS 35.0%
TTCAAGACTACAAAAAGAGC+TGG - chr3.3:80856613-80856632 MS.gene049185:CDS 35.0%
TTCACACACTTGTTCAATCA+GGG - chr3.3:80857437-80857456 MS.gene049185:intron 35.0%
TTGGTTGAATCATTGAGATG+AGG + chr3.3:80855171-80855190 None:intergenic 35.0%
TTTCTCTCCAATAATCATCC+GGG + chr3.3:80859123-80859142 None:intergenic 35.0%
! AACTGTGTGTTGTTGTGTAT+AGG - chr3.3:80858868-80858887 MS.gene049185:intron 35.0%
! ACTGGCAATTCTTATTTCTC+AGG - chr3.3:80857013-80857032 MS.gene049185:intron 35.0%
! AGAAGTGTAGTAACTGTAAC+TGG + chr3.3:80857689-80857708 None:intergenic 35.0%
! AGAAGTTGCTCCTTTTCTAT+TGG - chr3.3:80857037-80857056 MS.gene049185:intron 35.0%
! ATGTTTAAGGCTGTGAATAC+TGG - chr3.3:80858044-80858063 MS.gene049185:intron 35.0%
! CAAAACGGTTTTCTTGATTC+TGG - chr3.3:80855111-80855130 MS.gene049185:CDS 35.0%
! GTTATGTTGGTTATGGAGAA+GGG - chr3.3:80859982-80860001 MS.gene049185:intron 35.0%
! GTTTTGTGGCAATAATGATC+TGG - chr3.3:80856437-80856456 MS.gene049185:intron 35.0%
! TGACACTGTCTTCATTGATT+TGG - chr3.3:80861105-80861124 MS.gene049185:CDS 35.0%
! TGAGATTGGTAATTGGGATT+TGG - chr3.3:80855986-80856005 MS.gene049185:intron 35.0%
! TTATGTTGGTTATGGAGAAG+GGG - chr3.3:80859983-80860002 MS.gene049185:intron 35.0%
! TTGTTTGGAGAGAGTAGTTT+TGG - chr3.3:80858180-80858199 MS.gene049185:intron 35.0%
!! ACCAACTACGTTGATGATAA+TGG - chr3.3:80855186-80855205 MS.gene049185:CDS 35.0%
!! ATGAGGTCAATAGCTTTATC+AGG + chr3.3:80859022-80859041 None:intergenic 35.0%
!! CTAATAACTTGCTCACTGAA+TGG + chr3.3:80859950-80859969 None:intergenic 35.0%
!! GCTTTGATGAAAGTTGATGA+TGG - chr3.3:80855333-80855352 MS.gene049185:CDS 35.0%
!! GTTTTGGACTTTGAATTCTC+TGG - chr3.3:80858196-80858215 MS.gene049185:intron 35.0%
!! TATAACAAGGGTGTTACCAT+TGG + chr3.3:80861134-80861153 None:intergenic 35.0%
!! TTCATTGATTTGGATGCCAA+TGG - chr3.3:80861115-80861134 MS.gene049185:CDS 35.0%
!!! AGAGGATTGTTTTAGCTCAT+CGG - chr3.3:80857371-80857390 MS.gene049185:intron 35.0%
!!! TCACACAAGGTGTGTTTTTT+TGG - chr3.3:80859746-80859765 MS.gene049185:intron 35.0%
AAACCTGAGAATCGGTAAGA+TGG + chr3.3:80860121-80860140 None:intergenic 40.0%
AAACTAAGGGAACGTGTGAT+TGG - chr3.3:80859555-80859574 MS.gene049185:intron 40.0%
AAAGAATGACATCACCTGCA+AGG + chr3.3:80857405-80857424 None:intergenic 40.0%
ACCTCAAAATCAATTCCTCG+GGG + chr3.3:80860947-80860966 None:intergenic 40.0%
ACTTTGACCAGAGTATGCAA+GGG + chr3.3:80856196-80856215 None:intergenic 40.0%
ATTGACCTCATTGATGAAGC+AGG - chr3.3:80859031-80859050 MS.gene049185:CDS 40.0%
CAAATGAACTGCAGCCTTTA+TGG + chr3.3:80858969-80858988 None:intergenic 40.0%
CACCTCAAAATCAATTCCTC+GGG + chr3.3:80860948-80860967 None:intergenic 40.0%
CCTTATAGCGACAGCTAAAA+CGG - chr3.3:80858802-80858821 MS.gene049185:CDS 40.0%
CGATGGTAATTGAAGAACTG+AGG - chr3.3:80860508-80860527 MS.gene049185:intron 40.0%
CTAAAAGCCCGGATGATTAT+TGG - chr3.3:80859113-80859132 MS.gene049185:intron 40.0%
CTCCATAACCAACATAACCT+GGG + chr3.3:80859980-80859999 None:intergenic 40.0%
CTTAAACCTTCACTTGGAAG+GGG - chr3.3:80857508-80857527 MS.gene049185:intron 40.0%
CTTCTGTATATCTGCACTTG+TGG + chr3.3:80858943-80858962 None:intergenic 40.0%
GACAGTTACAAAGGAGAAGA+GGG + chr3.3:80858568-80858587 None:intergenic 40.0%
GATCGGTAAGTATTCACACA+AGG - chr3.3:80859733-80859752 MS.gene049185:intron 40.0%
GATGTAGGACTATTAATGGC+TGG - chr3.3:80857222-80857241 MS.gene049185:CDS 40.0%
GCAACTGTTGCTATATGATC+AGG + chr3.3:80859462-80859481 None:intergenic 40.0%
GCAATCTGTTGCTGAAATGA+GGG - chr3.3:80857954-80857973 MS.gene049185:intron 40.0%
GCCTCCAAAGTGAATATCAT+CGG + chr3.3:80860650-80860669 None:intergenic 40.0%
GCTTAAACCTTCACTTGGAA+GGG - chr3.3:80857507-80857526 MS.gene049185:intron 40.0%
GTACCAAAAGAAAACGGAAC+AGG + chr3.3:80855234-80855253 None:intergenic 40.0%
GTCCACGCTTAAAATGGTAA+TGG - chr3.3:80859156-80859175 MS.gene049185:intron 40.0%
GTTCACACACTTGTTCAATC+AGG - chr3.3:80857436-80857455 MS.gene049185:intron 40.0%
TAAAGTTGCTATGGGTCTAC+CGG + chr3.3:80859646-80859665 None:intergenic 40.0%
TACTTCCTGCTTCATCAATG+AGG + chr3.3:80859039-80859058 None:intergenic 40.0%
TACTTGCATAGAAGCCGTAA+AGG + chr3.3:80860227-80860246 None:intergenic 40.0%
TAGTGACAGAAGCTACACTT+TGG - chr3.3:80855915-80855934 MS.gene049185:intron 40.0%
TATCGAACCTGCAACAACTA+AGG + chr3.3:80855597-80855616 None:intergenic 40.0%
TCCATAACCAACATAACCTG+GGG + chr3.3:80859979-80859998 None:intergenic 40.0%
TCTCCATAACCAACATAACC+TGG + chr3.3:80859981-80860000 None:intergenic 40.0%
TCTGACAACCAATTAAACGG+AGG + chr3.3:80855779-80855798 None:intergenic 40.0%
TCTGTACATGTCACATCGAT+TGG - chr3.3:80859839-80859858 MS.gene049185:intron 40.0%
TGAGTCAAGTATGAGTTCAC+TGG + chr3.3:80859302-80859321 None:intergenic 40.0%
TGCAATCTGTTGCTGAAATG+AGG - chr3.3:80857953-80857972 MS.gene049185:intron 40.0%
TGCTTAAACCTTCACTTGGA+AGG - chr3.3:80857506-80857525 MS.gene049185:intron 40.0%
TGTAGGACTATTAATGGCTG+GGG - chr3.3:80857224-80857243 MS.gene049185:CDS 40.0%
TGTTCAGTCCACGCTTAAAA+TGG - chr3.3:80859150-80859169 MS.gene049185:intron 40.0%
TTCAGGAAACGGACATGATA+AGG - chr3.3:80859898-80859917 MS.gene049185:intron 40.0%
TTTGGACTCTGGATTATAGC+CGG - chr3.3:80856004-80856023 MS.gene049185:intron 40.0%
! AAAAGGATAAGGCTTTGGCA+CGG - chr3.3:80858466-80858485 MS.gene049185:intron 40.0%
! ATATCATCGTGGCTTGTGAT+TGG - chr3.3:80856464-80856483 MS.gene049185:intron 40.0%
! ATTGCTTGCTGAAAAGTGCA+AGG - chr3.3:80861078-80861097 MS.gene049185:CDS 40.0%
! GGTTATGTTGGTTATGGAGA+AGG - chr3.3:80859981-80860000 MS.gene049185:intron 40.0%
! GTGGTGATGACTTCAAATGT+GGG - chr3.3:80860399-80860418 MS.gene049185:intron 40.0%
! TATGTTGGTTATGGAGAAGG+GGG - chr3.3:80859984-80860003 MS.gene049185:intron 40.0%
! TGCCATTACCATTTTAAGCG+TGG + chr3.3:80859161-80859180 None:intergenic 40.0%
! TGGTGATGACTTCAAATGTG+GGG - chr3.3:80860400-80860419 MS.gene049185:intron 40.0%
! TTCGGCTGAGATTGGTAATT+GGG - chr3.3:80855980-80855999 MS.gene049185:intron 40.0%
! TTGCATACTCTCTAAAAGCC+CGG - chr3.3:80859102-80859121 MS.gene049185:intron 40.0%
! TTTCGGCTGAGATTGGTAAT+TGG - chr3.3:80855979-80855998 MS.gene049185:intron 40.0%
!! ATTGGGAGGGATTTGTTGTT+TGG - chr3.3:80858165-80858184 MS.gene049185:intron 40.0%
!! CGCTTAAAATGGTAATGGCA+TGG - chr3.3:80859161-80859180 MS.gene049185:intron 40.0%
!! TCTATATCACAAAGGCGTTC+TGG - chr3.3:80856686-80856705 MS.gene049185:CDS 40.0%
!! TCTTTGGCTGCATGCTATTT+TGG - chr3.3:80859711-80859730 MS.gene049185:intron 40.0%
!!! ATTTTTTGGGCTACCCGAAA+AGG - chr3.3:80856240-80856259 MS.gene049185:CDS 40.0%
!!! CATGTAACCTTTTGGTTCCA+TGG + chr3.3:80857907-80857926 None:intergenic 40.0%
AAAAGAGAGAGGAGAGCTAG+AGG - chr3.3:80857248-80857267 MS.gene049185:CDS 45.0%
AAAAGGCTGCTGTCATATCC+TGG - chr3.3:80856257-80856276 MS.gene049185:CDS 45.0%
AAAATCAATTCCTCGGGGCA+TGG + chr3.3:80860942-80860961 None:intergenic 45.0%
AAAGTTGCTATGGGTCTACC+GGG + chr3.3:80859645-80859664 None:intergenic 45.0%
AACTGGAATTCCTGACCAGA+GGG + chr3.3:80859487-80859506 None:intergenic 45.0%
AAGGACCTTGTCTGTAAGGA+AGG - chr3.3:80860980-80860999 MS.gene049185:CDS 45.0%
AAGGCACGTGCAATTACAGA+AGG + chr3.3:80857116-80857135 None:intergenic 45.0%
AAGTTATTAGGATCTCCCCC+AGG - chr3.3:80859960-80859979 MS.gene049185:intron 45.0%
ACCAAAACTCAACGAACCTG+TGG + chr3.3:80860600-80860619 None:intergenic 45.0%
AGAGGTCTAGCACCATATGT+TGG + chr3.3:80861013-80861032 None:intergenic 45.0%
AGCCAGGTTATGTGTCCAAT+GGG - chr3.3:80856651-80856670 MS.gene049185:CDS 45.0%
AGGCACGTGCAATTACAGAA+GGG + chr3.3:80857115-80857134 None:intergenic 45.0%
AGTCAAGGACCTTGTCTGTA+AGG - chr3.3:80860976-80860995 MS.gene049185:CDS 45.0%
CAAAAAGAGCTGGCTAGAGA+TGG - chr3.3:80856623-80856642 MS.gene049185:CDS 45.0%
CAACAGGATAGATGAAGTGG+TGG - chr3.3:80860554-80860573 MS.gene049185:intron 45.0%
CAAGCAATGCTTCAGCCAAT+GGG + chr3.3:80861066-80861085 None:intergenic 45.0%
CATAGCCTTCCTTACAGACA+AGG + chr3.3:80860988-80861007 None:intergenic 45.0%
CATTTCTTACTCTCAGGTGC+AGG - chr3.3:80859234-80859253 MS.gene049185:CDS 45.0%
CCATAACCAACATAACCTGG+GGG + chr3.3:80859978-80859997 None:intergenic 45.0%
CGACAGTTACAAAGGAGAAG+AGG + chr3.3:80858569-80858588 None:intergenic 45.0%
CGATAAGTTTCGGCTGAGAT+TGG - chr3.3:80855972-80855991 MS.gene049185:intron 45.0%
CGATCAAAGTGAAACCAACG+CGG + chr3.3:80855893-80855912 None:intergenic 45.0%
CTCGCCGATGATATTCACTT+TGG - chr3.3:80860643-80860662 MS.gene049185:intron 45.0%
CTTGTTCAATCAGGGACAAC+CGG - chr3.3:80857445-80857464 MS.gene049185:intron 45.0%
CTTTGACCAGAGTATGCAAG+GGG + chr3.3:80856195-80856214 None:intergenic 45.0%
GAAGGCTATGACCCAACATA+TGG - chr3.3:80860998-80861017 MS.gene049185:CDS 45.0%
GACAAAACGTGTCATGTCCT+TGG - chr3.3:80857200-80857219 MS.gene049185:CDS 45.0%
GACAGCTAAAACGGAACGAA+GGG - chr3.3:80858811-80858830 MS.gene049185:CDS 45.0%
GACTTTGACCAGAGTATGCA+AGG + chr3.3:80856197-80856216 None:intergenic 45.0%
GAGGTCTAGCACCATATGTT+GGG + chr3.3:80861012-80861031 None:intergenic 45.0%
GATGCAATACACTGCACAGA+CGG + chr3.3:80858414-80858433 None:intergenic 45.0%
GCAGCTCATGCAAAGAACAT+CGG + chr3.3:80859198-80859217 None:intergenic 45.0%
GCCGATGATATTCACTTTGG+AGG - chr3.3:80860646-80860665 MS.gene049185:intron 45.0%
GCTCAACAGGATAGATGAAG+TGG - chr3.3:80860551-80860570 MS.gene049185:intron 45.0%
GGATCTGCCGCTAAAACAAA+AGG - chr3.3:80856713-80856732 MS.gene049185:CDS 45.0%
GGGAAAACAGCTATTGCAGA+GGG - chr3.3:80856990-80857009 MS.gene049185:CDS 45.0%
GGGCTGATTGATCCAGTTAT+TGG - chr3.3:80856882-80856901 MS.gene049185:intron 45.0%
GGTAATTGGGATTTGGACTC+TGG - chr3.3:80855993-80856012 MS.gene049185:intron 45.0%
TATCGGTCCTTAGTTGTTGC+AGG - chr3.3:80855587-80855606 MS.gene049185:intron 45.0%
TCAACTTCTCGGCCAATAAC+TGG + chr3.3:80856897-80856916 None:intergenic 45.0%
TCTATCCTGTTGAGCAGTTC+TGG + chr3.3:80860546-80860565 None:intergenic 45.0%
TCTGTGAAGAGATCTCGAGT+CGG - chr3.3:80859609-80859628 MS.gene049185:CDS 45.0%
TCTTGCATATCTCCACTCCA+TGG - chr3.3:80857887-80857906 MS.gene049185:intron 45.0%
TGCTCTATCACAATTCTGCG+TGG - chr3.3:80856836-80856855 MS.gene049185:intron 45.0%
TGGGAAAACAGCTATTGCAG+AGG - chr3.3:80856989-80857008 MS.gene049185:CDS 45.0%
TGTTAATGCCTCTCTGCTGT+TGG - chr3.3:80858118-80858137 MS.gene049185:intron 45.0%
TTACTATTCTGTGGCCCAAC+TGG - chr3.3:80859663-80859682 MS.gene049185:CDS 45.0%
TTAGCATCACGTGTCAACAC+CGG - chr3.3:80855554-80855573 MS.gene049185:intron 45.0%
TTATGGTGCATCTGGCATTG+AGG - chr3.3:80859273-80859292 MS.gene049185:CDS 45.0%
TTGTTCAATCAGGGACAACC+GGG - chr3.3:80857446-80857465 MS.gene049185:intron 45.0%
TTTACAATGGCTCTCCTGAG+AGG + chr3.3:80861031-80861050 None:intergenic 45.0%
TTTGACCAGAGTATGCAAGG+GGG + chr3.3:80856194-80856213 None:intergenic 45.0%
! AACGAACCTGTGGCTTTTCA+AGG + chr3.3:80860590-80860609 None:intergenic 45.0%
! ACAGAAGCTACACTTTGGAG+AGG - chr3.3:80855920-80855939 MS.gene049185:intron 45.0%
! ACGAACCTGTGGCTTTTCAA+GGG + chr3.3:80860589-80860608 None:intergenic 45.0%
! CGACCTGTTCCGTTTTCTTT+TGG - chr3.3:80855228-80855247 MS.gene049185:CDS 45.0%
! CTTGCTGAAAAGTGCAAGGA+AGG - chr3.3:80861082-80861101 MS.gene049185:CDS 45.0%
! GATATGACAGCAGCCTTTTC+GGG + chr3.3:80856256-80856275 None:intergenic 45.0%
! GATCTGGAGCTATATCATCG+TGG - chr3.3:80856453-80856472 MS.gene049185:intron 45.0%
! GGATATGACAGCAGCCTTTT+CGG + chr3.3:80856257-80856276 None:intergenic 45.0%
! GGTGGTGATGACTTCAAATG+TGG - chr3.3:80860398-80860417 MS.gene049185:intron 45.0%
! TGAGGTGTCTGAATCAGTCA+AGG - chr3.3:80860961-80860980 MS.gene049185:CDS 45.0%
!! AGATTTGTTGTGTCCCCCAT+TGG + chr3.3:80856669-80856688 None:intergenic 45.0%
!!! AACCTTTTGGTTCCATGGAG+TGG + chr3.3:80857902-80857921 None:intergenic 45.0%
!!! CCGTTTTAGCTGTCGCTATA+AGG + chr3.3:80858805-80858824 None:intergenic 45.0%
!!! GGCTGCATGCTATTTTGGAT+CGG - chr3.3:80859716-80859735 MS.gene049185:intron 45.0%
!! AATAAAAAAATAAAAATAAG+CGG - chr3.3:80860781-80860800 MS.gene049185:intron 5.0%
!! TTTAAGAAAATTAATTTATT+TGG - chr3.3:80855661-80855680 MS.gene049185:intron 5.0%
!!! ATTTTTTTTGTAATTTTAAT+TGG - chr3.3:80858147-80858166 MS.gene049185:intron 5.0%
!!! TTTTTTTTGTAATTTTAATT+GGG - chr3.3:80858148-80858167 MS.gene049185:intron 5.0%
AACAGCTATTGCAGAGGGAC+TGG - chr3.3:80856995-80857014 MS.gene049185:CDS 50.0%
AACTGACCCCTTCCAAGTGA+AGG + chr3.3:80857517-80857536 None:intergenic 50.0%
AAGGAGAAGAGGGAGTCACT+TGG + chr3.3:80858558-80858577 None:intergenic 50.0%
AAGGGTCGACACAACTCCAT+AGG - chr3.3:80860438-80860457 MS.gene049185:intron 50.0%
AATCAGCCCAACACTTGCAC+GGG + chr3.3:80856871-80856890 None:intergenic 50.0%
ACAACCGGGAGGGGAAATAA+GGG - chr3.3:80857460-80857479 MS.gene049185:intron 50.0%
ACACCGGTCACGTGAAGTAT+CGG - chr3.3:80855570-80855589 MS.gene049185:intron 50.0%
ACGTGTGATTGGACAAGAGG+AGG - chr3.3:80859566-80859585 MS.gene049185:CDS 50.0%
ACTTGGAAGGGGTCAGTTTC+AGG - chr3.3:80857519-80857538 MS.gene049185:intron 50.0%
CAATCAGCCCAACACTTGCA+CGG + chr3.3:80856872-80856891 None:intergenic 50.0%
CACTGCAGCCTCCGTTTAAT+TGG - chr3.3:80855768-80855787 MS.gene049185:CDS 50.0%
CCAATTCTTCTGGGTGAAGC+TGG - chr3.3:80856963-80856982 MS.gene049185:CDS 50.0%
CCAGCTTCACCCAGAAGAAT+TGG + chr3.3:80856966-80856985 None:intergenic 50.0%
CCAGGTTATGTGTCCAATGG+GGG - chr3.3:80856653-80856672 MS.gene049185:CDS 50.0%
CGACAGCTAAAACGGAACGA+AGG - chr3.3:80858810-80858829 MS.gene049185:CDS 50.0%
CGTGTCATGTCCTTGGATGT+AGG - chr3.3:80857207-80857226 MS.gene049185:CDS 50.0%
CTCCACTCCATGGAACCAAA+AGG - chr3.3:80857897-80857916 MS.gene049185:intron 50.0%
CTCGGCTCATCAATCCAAAC+AGG + chr3.3:80858501-80858520 None:intergenic 50.0%
GAACTGGAATTCCTGACCAG+AGG + chr3.3:80859488-80859507 None:intergenic 50.0%
GAGCCAGGTTATGTGTCCAA+TGG - chr3.3:80856650-80856669 MS.gene049185:CDS 50.0%
GCAAGCAATGCTTCAGCCAA+TGG + chr3.3:80861067-80861086 None:intergenic 50.0%
GCCAGGTTATGTGTCCAATG+GGG - chr3.3:80856652-80856671 MS.gene049185:CDS 50.0%
GGAACGTGTGATTGGACAAG+AGG - chr3.3:80859563-80859582 MS.gene049185:CDS 50.0%
TAGCAACAGTTGCTTCCCTC+TGG - chr3.3:80859469-80859488 MS.gene049185:intron 50.0%
TATGTGTGGCACACGACAAG+AGG - chr3.3:80857353-80857372 MS.gene049185:CDS 50.0%
TCATCCCCTTGAAAAGCCAC+AGG - chr3.3:80860581-80860600 MS.gene049185:intron 50.0%
TGCTGCTGCAAGACGTGAAA+AGG - chr3.3:80860915-80860934 MS.gene049185:CDS 50.0%
TTCGTCCAGAACTGCTCAAC+AGG - chr3.3:80860538-80860557 MS.gene049185:intron 50.0%
TTCTGGGTGAAGCTGGAGTT+GGG - chr3.3:80856970-80856989 MS.gene049185:CDS 50.0%
TTGGATTGATGAGCCGAGTG+AGG - chr3.3:80858503-80858522 MS.gene049185:intron 50.0%
! AGAACCCTTATTTCCCCTCC+CGG + chr3.3:80857467-80857486 None:intergenic 50.0%
! AGGGGTCAGTTTCAGGTGAT+TGG - chr3.3:80857526-80857545 MS.gene049185:intron 50.0%
! CAGTTTTCCCAACGCCAGTT+GGG + chr3.3:80859680-80859699 None:intergenic 50.0%
! CATATGGTGCTAGACCTCTC+AGG - chr3.3:80861014-80861033 MS.gene049185:CDS 50.0%
! CCCCCAGGTTATGTTGGTTA+TGG - chr3.3:80859975-80859994 MS.gene049185:intron 50.0%
! CTACACTTTGGAGAGGCCAT+TGG - chr3.3:80855927-80855946 MS.gene049185:intron 50.0%
! GCATCGGCAAACCTGAGAAT+CGG + chr3.3:80860129-80860148 None:intergenic 50.0%
! GCCACAGGTTCGTTGAGTTT+TGG - chr3.3:80860596-80860615 MS.gene049185:intron 50.0%
! GGGTCTAGTGCCATTGCTAA+GGG - chr3.3:80860420-80860439 MS.gene049185:intron 50.0%
! GTTGTGTCGACCCTTAGCAA+TGG + chr3.3:80860433-80860452 None:intergenic 50.0%
! TCAGTTTTCCCAACGCCAGT+TGG + chr3.3:80859681-80859700 None:intergenic 50.0%
!! CATCGGTTTACACTCCTTGC+AGG - chr3.3:80857388-80857407 MS.gene049185:intron 50.0%
!! CGAACCTGTGGCTTTTCAAG+GGG + chr3.3:80860588-80860607 None:intergenic 50.0%
!! GCCCCGAGGAATTGATTTTG+AGG - chr3.3:80860943-80860962 MS.gene049185:CDS 50.0%
!! TGGCCATCTTACCGATTCTC+AGG - chr3.3:80860115-80860134 MS.gene049185:intron 50.0%
ACAGTTGCTTCCCTCTGGTC+AGG - chr3.3:80859474-80859493 MS.gene049185:intron 55.0%
AGAGATCTCGAGTCGGCCTT+CGG - chr3.3:80859616-80859635 MS.gene049185:CDS 55.0%
ATGGCTGGGGCAAAAGAGAG+AGG - chr3.3:80857237-80857256 MS.gene049185:CDS 55.0%
CACGGCGGTTTCAACCTGTT+TGG - chr3.3:80858484-80858503 MS.gene049185:intron 55.0%
CCACAGCTGCCAACTGATCT+GGG + chr3.3:80856589-80856608 None:intergenic 55.0%
CCCCCATTGGACACATAACC+TGG + chr3.3:80856656-80856675 None:intergenic 55.0%
CGGGTCAAACCCAGATCAGT+TGG - chr3.3:80856577-80856596 MS.gene049185:CDS 55.0%
CGTGATGCTAACGCGCCATT+TGG + chr3.3:80855545-80855564 None:intergenic 55.0%
CTTCTGGGTGAAGCTGGAGT+TGG - chr3.3:80856969-80856988 MS.gene049185:CDS 55.0%
GAACTCCCCCTTGCATACTC+TGG - chr3.3:80856186-80856205 MS.gene049185:CDS 55.0%
GACAACCGGGAGGGGAAATA+AGG - chr3.3:80857459-80857478 MS.gene049185:intron 55.0%
GCTAGAGATGGTAGAGAGCC+AGG - chr3.3:80856635-80856654 MS.gene049185:CDS 55.0%
GGACCGATACTTCACGTGAC+CGG + chr3.3:80855576-80855595 None:intergenic 55.0%
GGATCTCCCCCAGGTTATGT+TGG - chr3.3:80859969-80859988 MS.gene049185:intron 55.0%
GGGAGGGGAAATAAGGGTTC+TGG - chr3.3:80857466-80857485 MS.gene049185:intron 55.0%
TCAATCAGGGACAACCGGGA+GGG - chr3.3:80857450-80857469 MS.gene049185:intron 55.0%
TCACTGCCCGTGCAAGTGTT+GGG - chr3.3:80856862-80856881 MS.gene049185:intron 55.0%
TCAGCAGTGAGCTGCTGAAC+TGG + chr3.3:80859504-80859523 None:intergenic 55.0%
TTCAATCAGGGACAACCGGG+AGG - chr3.3:80857449-80857468 MS.gene049185:intron 55.0%
! AGGATAAGGCTTTGGCACGG+CGG - chr3.3:80858469-80858488 MS.gene049185:intron 55.0%
! GGGGTCTAGTGCCATTGCTA+AGG - chr3.3:80860419-80860438 MS.gene049185:intron 55.0%
!! TCACAAAGGCGTTCTGGTGC+AGG - chr3.3:80856692-80856711 MS.gene049185:CDS 55.0%
AGGCGTGTCTGTTTCCGCGT+TGG - chr3.3:80855876-80855895 MS.gene049185:CDS 60.0%
CAATCAGGGACAACCGGGAG+GGG - chr3.3:80857451-80857470 MS.gene049185:intron 60.0%
CCCAGATCAGTTGGCAGCTG+TGG - chr3.3:80856586-80856605 MS.gene049185:CDS 60.0%
CTCACTGCCCGTGCAAGTGT+TGG - chr3.3:80856861-80856880 MS.gene049185:intron 60.0%
GAGATCTCGAGTCGGCCTTC+GGG - chr3.3:80859617-80859636 MS.gene049185:CDS 60.0%
GCCACAGCTGCCAACTGATC+TGG + chr3.3:80856590-80856609 None:intergenic 60.0%
GTGAAAAGGACCATGCCCCG+AGG - chr3.3:80860929-80860948 MS.gene049185:CDS 60.0%
TCTGTGGCCCAACTGGCGTT+GGG - chr3.3:80859670-80859689 MS.gene049185:CDS 60.0%
TTCTGTGGCCCAACTGGCGT+TGG - chr3.3:80859669-80859688 MS.gene049185:CDS 60.0%
TGGGTCTACCGGGATCCCGA+AGG + chr3.3:80859635-80859654 None:intergenic 65.0%
CGAGTCGGCCTTCGGGATCC+CGG - chr3.3:80859624-80859643 MS.gene049185:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 80855069 80861201 80855069 ID=MS.gene049185
chr3.3 mRNA 80855069 80861201 80855069 ID=MS.gene049185.t1;Parent=MS.gene049185
chr3.3 exon 80860891 80861201 80860891 ID=MS.gene049185.t1.exon1;Parent=MS.gene049185.t1
chr3.3 CDS 80860891 80861201 80860891 ID=cds.MS.gene049185.t1;Parent=MS.gene049185.t1
chr3.3 exon 80859563 80859696 80859563 ID=MS.gene049185.t1.exon2;Parent=MS.gene049185.t1
chr3.3 CDS 80859563 80859696 80859563 ID=cds.MS.gene049185.t1;Parent=MS.gene049185.t1
chr3.3 exon 80859212 80859444 80859212 ID=MS.gene049185.t1.exon3;Parent=MS.gene049185.t1
chr3.3 CDS 80859212 80859444 80859212 ID=cds.MS.gene049185.t1;Parent=MS.gene049185.t1
chr3.3 exon 80858961 80859069 80858961 ID=MS.gene049185.t1.exon4;Parent=MS.gene049185.t1
chr3.3 CDS 80858961 80859069 80858961 ID=cds.MS.gene049185.t1;Parent=MS.gene049185.t1
chr3.3 exon 80858730 80858860 80858730 ID=MS.gene049185.t1.exon5;Parent=MS.gene049185.t1
chr3.3 CDS 80858730 80858860 80858730 ID=cds.MS.gene049185.t1;Parent=MS.gene049185.t1
chr3.3 exon 80857746 80857847 80857746 ID=MS.gene049185.t1.exon6;Parent=MS.gene049185.t1
chr3.3 CDS 80857746 80857847 80857746 ID=cds.MS.gene049185.t1;Parent=MS.gene049185.t1
chr3.3 exon 80857099 80857380 80857099 ID=MS.gene049185.t1.exon7;Parent=MS.gene049185.t1
chr3.3 CDS 80857099 80857380 80857099 ID=cds.MS.gene049185.t1;Parent=MS.gene049185.t1
chr3.3 exon 80856920 80857020 80856920 ID=MS.gene049185.t1.exon8;Parent=MS.gene049185.t1
chr3.3 CDS 80856920 80857020 80856920 ID=cds.MS.gene049185.t1;Parent=MS.gene049185.t1
chr3.3 exon 80856533 80856827 80856533 ID=MS.gene049185.t1.exon9;Parent=MS.gene049185.t1
chr3.3 CDS 80856533 80856827 80856533 ID=cds.MS.gene049185.t1;Parent=MS.gene049185.t1
chr3.3 exon 80856134 80856367 80856134 ID=MS.gene049185.t1.exon10;Parent=MS.gene049185.t1
chr3.3 CDS 80856134 80856367 80856134 ID=cds.MS.gene049185.t1;Parent=MS.gene049185.t1
chr3.3 exon 80855668 80855901 80855668 ID=MS.gene049185.t1.exon11;Parent=MS.gene049185.t1
chr3.3 CDS 80855668 80855901 80855668 ID=cds.MS.gene049185.t1;Parent=MS.gene049185.t1
chr3.3 exon 80855069 80855374 80855069 ID=MS.gene049185.t1.exon12;Parent=MS.gene049185.t1
chr3.3 CDS 80855069 80855374 80855069 ID=cds.MS.gene049185.t1;Parent=MS.gene049185.t1
Gene Sequence

>MS.gene049185

ATGCTTGGTCTCATAGCTGAAGCTGAAGAGACAAATCGTTCTCAAAACGGTTTTCTTGATTCTGGTGTAGTCACTCTTGAGAAAGCTCGTGATGCTGTTCCTCATCTCAATGATTCAACCAACTACGTTGATGATAATGGAGTGTATGTGTATGAAGATCGACCTGTTCCGTTTTCTTTTGGTACTAAACGTGTTTTTGAAGCTGCTGTTGAGTATTCAAGATCTCTGAACCATAATTTTGTTGATCCTGAACATATTTTCGTTGCTTTGATGAAAGTTGATGATGGAAGTTCTGCTAGAATTCTTTATAGGTATCAAATCTCTTTCTTTATTCAATACTTATAATATATTTCCATTTGGTATTTGGAGAGTATTGTTGTTTTTGGCTCATTTCTATAATTATATGCATATGCATATGCATTTTAGTGTATACTTTCTTGTTTTGAATTATTTCCTAAAGAAACTTATTTGAACCAAATGGCGCGTTAGCATCACGTGTCAACACCGGTCACGTGAAGTATCGGTCCTTAGTTGTTGCAGGTTCGATACTTGACATCCAATCAATGATAACCAAGAAACAAATGTTGGCTATTTTAAGAAAATTAATTTATTTGGTAATGAACTTTTTAAGAATAATGCTGGATGTCAAGAAACTTGCTTCGTAAATCTGTCACGATGTCAGTTATATAAAGTGTTACACACTGCAGCCTCCGTTTAATTGGTTGTCAGACTATTTGTGAAGCTTTAATGACTAAATCAGTCGTGCTAAATTGCATCGCTGTTATGACAATTTAAATTCAACTTTAAAGGCGTGTCTGTTTCCGCGTTGGTTTCACTTTGATCGCATAGTGACAGAAGCTACACTTTGGAGAGGCCATTGGCTGTGTTTCCAAATATGTACTTCGATAAGTTTCGGCTGAGATTGGTAATTGGGATTTGGACTCTGGATTATAGCCGGACAATATGACATAGTTCATGGCACATAGATGATCTTCAGTTGTTGCTCTAGACTTAATACATCAACTGTTTTGTGCTTAAAAACTAAATTGAAGATTAATGAGTTATCCAAAATACCATTTGTCTTACGATTTTAGATGATCGATTTTGACTGAAGTTCGAACTCCCCCTTGCATACTCTGGTCAAAGTCAATCTCAATTTGTCGGTGAAACAATTTTTTGGGCTACCCGAAAAGGCTGCTGTCATATCCTGGTTTATAAGTCCTTTGAGTTGCATAACTAGTTTGAAAAATATTCTTTGGGGTAAAATTTTAAGGAAATTCAGTTTTATCAAGTTTTTGTAGATGCATTAGCTTTTTAAAGAGTGTGGAAATTTGCTTAATAGCAAATGCCAATATTTGTTTTTCTTTTGTTTTGTGGCAATAATGATCTGGAGCTATATCATCGTGGCTTGTGATTGGACAATTGACTGTGTGCAAGATCTATCATTAAATTATGTGTGTAGCTATAATTTTCCATTAATGTTGCTAGTATGCAAATGATTTCAGACTCGGGTCAAACCCAGATCAGTTGGCAGCTGTGGCATATTCAAGACTACAAAAAGAGCTGGCTAGAGATGGTAGAGAGCCAGGTTATGTGTCCAATGGGGGACACAACAAATCTATATCACAAAGGCGTTCTGGTGCAGGATCTGCCGCTAAAACAAAAGGCAAGAAAATATAAAGTTTGTTGTTTATGATTTGATTTTGATGGTTGAAGGCAGAGATAAGTTTTTCTCATATTCATTCTCTGGTTGTCAGATAAAAAGAGTGCTCTATCACAATTCTGCGTGGATCTCACTGCCCGTGCAAGTGTTGGGCTGATTGATCCAGTTATTGGCCGAGAAGTTGAAGTTCAAAGAATTATTCAAATACTATGCCGAAAGACAAAAAGCAATCCAATTCTTCTGGGTGAAGCTGGAGTTGGGAAAACAGCTATTGCAGAGGGACTGGCAATTCTTATTTCTCAGGCAGAAGTTGCTCCTTTTCTATTGGTGTGTCTATCAACAAATGATTAATGTTTCTAAAGTTTTTCTTTTCTTGTGTACCCTTCTGTAATTGCACGTGCCTTAATTAATATGTTTCTATCTACTTGGAGTGCATTGTAATTTCACTTTCTAACTTGTGTCTGCACAGACAAAACGTGTCATGTCCTTGGATGTAGGACTATTAATGGCTGGGGCAAAAGAGAGAGGAGAGCTAGAGGACCGCGTTACAAAATTAATAAAAGATATAATAGAGTCAGGTGAATACATTTTAGCAAAAATATTATAAGAGTTGTGTTAATATATGTGTGGCACACGACAAGAGGATTGTTTTAGCTCATCGGTTTACACTCCTTGCAGGTGATGTCATTCTTTTCATTGACGAAGTTCACACACTTGTTCAATCAGGGACAACCGGGAGGGGAAATAAGGGTTCTGGCTTTGACATTGCTAATTTGCTTAAACCTTCACTTGGAAGGGGTCAGTTTCAGGTGATTGGTTGCCCTGTAATCTCATCTGCTAGTTTCCTTTGTTCCAAGTGATACTTGAATATTTATGTATTTCAATTTGAAGCCATCAAATAAACAATTGCTAGTAACGTATAAGATTAAGGTTAGAGGAAAAAATATATGATAACCAGTTACAGTTACTACACTTCTGTACCCAACATTTTTCAAAGTAACTGTACTAAACAAGATTAGCATTTAACATCTGGAAAGTAGGAAGGTTGAGATTATTCTAGAAGTTGTCTTTATGAAATACTGGGAGGCTATAGTTCTTGTTAATAGACTCAATGCTTAGATGGAAGAGATATGAGTGAGTGTTAACTGGTAAATATCTTGCATATCTCCACTCCATGGAACCAAAAGGTTACATGTACTAGAAAAATTATTTTTCAAACATTGCAATCTGTTGCTGAAATGAGGGCAAATTTGTATGTTCGGTGTTCGTGAGTCTCTTTTCAATTTCTATAAAGCTAGTTCCATATATTTTCATGTTTAAGGCTGTGAATACTGGAATCAGTTATATTCAACAACGCTAAGGCATGATATTCAATCGTATTTTTTCTGTTAATGCCTCTCTGCTGTTGGAATTTTATTTTTTTTGTAATTTTAATTGGGAGGGATTTGTTGTTTGGAGAGAGTAGTTTTGGACTTTGAATTCTCTGGCTGACACAACTGTGTAAGTCATAATTGTTCTTTCCTCTGATGAATTTTTCTTGAATAGTTGGTTCAATTATATTATGCAGTCGGAATGTTCTTACAGTGATCATTTTTGTATAAGATGGGATCATCATTTTTACTTGAGCATTGTAATAAAATATGCACACACACCATAACTTGTCACTATGAATAACATTTCCGTCTGTGCAGTGTATTGCATCTACCACTATTGATGAATACAGGCTTCATTTTGAAAAGGATAAGGCTTTGGCACGGCGGTTTCAACCTGTTTGGATTGATGAGCCGAGTGAGGTTGCACTTTATATTCGTGTCTATACTGTTCCAAGTGACTCCCTCTTCTCCTTTGTAACTGTCGCTTTTGTAGAAAAAAATTGTTTCTATTTATTTGTACGTTTTTAAAGTTCAATGAGACATTAACTATTGTTTCGCAATAACGCCCTTAATTATTTATTGCAAAGAGAGAAATAGATGGAATGAGATGTAATAAATAGTTAAGATTGTTATAGAAAAAAGGTATAATTTTATCAAATGTACCAAGTTTATTGGTTTGTTTGGTACGTGTAAATAACCTTATAGCGACAGCTAAAACGGAACGAAGGGAGTACCATTTTAATCATAATTTGATCTCTTAATGAACTGTGTGTTGTTGTGTATAGGATGATGCAATGAAGATACTTATGGGTGTACGTGAGAAATATGAAACACACCACAAGTGCAGATATACAGAAGATGCCATAAAGGCTGCAGTTCATTTGTCAGCAAGATACATAGTTGATAGGTATCTACCTGATAAAGCTATTGACCTCATTGATGAAGCAGGAAGTAAAGCTTCTATTGAAGCCTTTAAGATGAAAAAAGAACACGATTATTGCATACTCTCTAAAAGCCCGGATGATTATTGGAGAGAAATTAGAACTGTTCAGTCCACGCTTAAAATGGTAATGGCATGGCTTGCCGTATTCCGATGTTCTTTGCATGAGCTGCTTACAGTTTAAGTTGACATTTCTTACTCTCAGGTGCAGGAGAGCATGCTTAAATATTATGGTGCATCTGGCATTGAGGATACCAGTGAACTCATACTTGACTCATATTTAACTTCTGCAGCATTTGATAATGAGTATGTTAGTGATACCCAAAGCAGAGTTCTTTCTTTTGTGCATATCTATCTAGATTTGGTTTTTGAGTGGCTGACATGTTATTGTGTTTTAGGTGTATAGAAGTTAGGCCTGATCATATAGCAACAGTTGCTTCCCTCTGGTCAGGAATTCCAGTTCAGCAGCTCACTGCTGATGAAAGAAGTCTTCTGTTAGATCTGGATAATAAACTAAGGGAACGTGTGATTGGACAAGAGGAGGCTGTTTCTGCCATTTCTAGATCTGTGAAGAGATCTCGAGTCGGCCTTCGGGATCCCGGTAGACCCATAGCAACTTTACTATTCTGTGGCCCAACTGGCGTTGGGAAAACTGAACTAGCAAAGTCTTTGGCTGCATGCTATTTTGGATCGGTAAGTATTCACACAAGGTGTGTTTTTTTGGCATTAATAATGAGGACATTCTTTATTTTTGTTTTTCCTCTTTTCGATGTTCTGAAATGATAAATTTGCAATCTGTACATGTCACATCGATTGGTTCGTCTGTTTATATTTTTGCCTTTCATACTATCATTTCAGGAAACGGACATGATAAGGTTAGACATGAGTGAATATATGGAACGCCATTCAGTGAGCAAGTTATTAGGATCTCCCCCAGGTTATGTTGGTTATGGAGAAGGGGGCATTTTAACCGAAGCTATTAGAAGAAAACCATTTACTGTGGTTTTGTTTGATGAAATAGAAAAAGCTCATCCAGATATATTTAACATTCTTCTTCAATTAATGGAAGATGGCCATCTTACCGATTCTCAGGTTTGCCGATGCTGATGTGAATCTTAATTTACTAGGACTTCAATAACCCTTTAAACATGAAACTTTCTCTTGGCATTTCTATATCTTCCTTTACGGCTTCTATGCAAGTAAAAACGATCACTTGTGTGATTCATAAAAACAAGCACTTGTAGTTGTATCAATAGAATATGAAATTAACACTACTAGTGCCCTAAATTTTTATGTTTATTGTTTGAAAAACTGGTTCTAATAGGGTCGAAGAGTTTCATTTAAAAATGCATTGGTGGTGATGACTTCAAATGTGGGGTCTAGTGCCATTGCTAAGGGTCGACACAACTCCATAGGTTTCTTCATTTCAGATGACAAACCAACATCATATAATGGATTGAAATCGATGGTAATTGAAGAACTGAGGACATATTTTCGTCCAGAACTGCTCAACAGGATAGATGAAGTGGTGGTGTTTCATCCCCTTGAAAAGCCACAGGTTCGTTGAGTTTTGGTTCTGATTTAGTTTAATGATTTAGCTCGCCGATGATATTCACTTTGGAGGCTCTTACACAATATTCTATTACTATTTATTTATTATTTAGTCATTTTTGTTTGGCAATAATATGATTTTCAGAAACCGTTTTAAGCAGTTAAATTTAAATACTGGTGTTTTTAATAAAAAAATAAAAATAAGCGGTGCCAAGTTTTTTTATGTGTATGCTTTTTTTTTATTGATGTTATTTGTCAAAAAAAGAAAATATTGATGTTATTGCTATACTTTTATCACAGTTGCTCCAAATATTTGATTTGCTGCTGCAAGACGTGAAAAGGACCATGCCCCGAGGAATTGATTTTGAGGTGTCTGAATCAGTCAAGGACCTTGTCTGTAAGGAAGGCTATGACCCAACATATGGTGCTAGACCTCTCAGGAGAGCCATTGTAAACTTAATTGCAAACCCATTGGCTGAAGCATTGCTTGCTGAAAAGTGCAAGGAAGGTGACACTGTCTTCATTGATTTGGATGCCAATGGTAACACCCTTGTTATAAATCAGCTTGATCAGACAGTCAACTTATCCGACACAAGTCACCCTTGA
Protein sequence

>MS.gene049185.t1

MLGLIAEAEETNRSQNGFLDSGVVTLEKARDAVPHLNDSTNYVDDNGVYVYEDRPVPFSFGTKRVFEAAVEYSRSLNHNFVDPEHIFVALMKVDDGSSARILYRLGSNPDQLAAVAYSRLQKELARDGREPGYVSNGGHNKSISQRRSDKKSALSQFCVDLTARASVGLIDPVIGREVEVQRIIQILCRKTKSNPILLGEAGVGKTAIAEGLAILISQAEVAPFLLTKRVMSLDVGLLMAGAKERGELEDRVTKLIKDIIESGDVILFIDEVHTLVQSGTTGRGNKGSGFDIANLLKPSLGRGQFQCIASTTIDEYRLHFEKDKALARRFQPVWIDEPSEDDAMKILMGVREKYETHHKCRYTEDAIKAAVHLSARYIVDRYLPDKAIDLIDEAGSKASIEAFKMKKEHDYCILSKSPDDYWREIRTVQSTLKMVQESMLKYYGASGIEDTSELILDSYLTSAAFDNECIEVRPDHIATVASLWSGIPVQQLTADERSLLLDLDNKLRERVIGQEEAVSAISRSVKRSRVGLRDPGRPIATLLFCGPTGVGKTELAKSLAACYFGSETDMIRLDMSEYMERHSVSKLLGSPPGYVGYGEGGILTEAIRRKPFTVVLFDEIEKAHPDIFNILLQLMEDGHLTDSQGRRVSFKNALVVMTSNVGSSAIAKGRHNSIGFFISDDKPTSYNGLKSMVIEELRTYFRPELLNRIDEVVVFHPLEKPQLLQIFDLLLQDVKRTMPRGIDFEVSESVKDLVCKEGYDPTYGARPLRRAIVNLIANPLAEALLAEKCKEGDTVFIDLDANGNTLVINQLDQTVNLSDTSHP