AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene06302

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06302.t1 MTR_3g098310 96.247 826 19 1 1 814 133 958 0.0 1640
MS.gene06302.t1 MTR_3g098310 96.037 656 14 1 1 644 133 788 0.0 1299
MS.gene06302.t1 MTR_3g498725 50.197 761 351 11 56 809 168 907 0.0 724
MS.gene06302.t1 MTR_3g102830 48.883 761 361 9 56 809 173 912 0.0 709
MS.gene06302.t1 MTR_8g100040 49.014 761 360 9 56 809 172 911 0.0 708
MS.gene06302.t1 MTR_7g012820 43.215 759 344 12 123 813 212 951 0.0 602
MS.gene06302.t1 MTR_7g012820 43.215 759 344 12 123 813 141 880 0.0 602
MS.gene06302.t1 MTR_6g013660 41.337 808 375 13 65 804 168 944 0.0 601
MS.gene06302.t1 MTR_3g106160 42.641 727 341 11 138 800 235 949 0.0 568
MS.gene06302.t1 MTR_4g109450 42.348 758 346 15 113 806 130 860 0.0 559
MS.gene06302.t1 MTR_4g109450 42.637 713 318 15 113 761 130 815 2.79e-175 527
MS.gene06302.t1 MTR_7g028970 39.755 815 391 17 56 807 83 860 2.37e-173 524
MS.gene06302.t1 MTR_3g461000 48.387 341 165 5 472 810 428 759 2.59e-104 340
MS.gene06302.t1 MTR_3g461000 35.958 381 231 3 47 427 72 439 9.40e-70 246
MS.gene06302.t1 MTR_2g099075 39.837 369 203 4 440 807 106 456 2.84e-81 269
MS.gene06302.t1 MTR_2g006950 39.701 335 175 5 440 772 42 351 6.55e-70 242
MS.gene06302.t1 MTR_2g006950 34.483 203 105 4 606 807 380 555 1.15e-29 125
MS.gene06302.t1 MTR_6g048860 48.951 143 72 1 134 276 117 258 1.30e-34 136
MS.gene06302.t1 MTR_1614s0010 40.284 211 108 4 575 783 1 195 5.32e-30 117
MS.gene06302.t1 MTR_1g076440 46.429 140 64 2 557 696 147 275 2.24e-29 119
MS.gene06302.t1 MTR_5g098360 37.069 116 66 2 480 589 53 167 3.49e-16 77.4
MS.gene06302.t1 MTR_7g096480 31.818 154 72 3 653 806 96 216 5.14e-16 79.0
MS.gene06302.t1 MTR_7g096480 34.146 123 48 2 472 594 6 95 7.80e-14 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06302.t1 AT5G51070 65.191 836 271 8 1 821 112 942 0.0 1080
MS.gene06302.t1 AT5G50920 48.777 777 337 11 56 809 171 909 0.0 715
MS.gene06302.t1 AT3G48870 49.017 763 357 10 56 809 160 899 0.0 711
MS.gene06302.t1 AT3G48870 49.017 763 357 10 56 809 191 930 0.0 709
MS.gene06302.t1 AT3G48870 49.017 763 357 10 56 809 191 930 0.0 709
MS.gene06302.t1 AT3G48870 49.017 763 357 10 56 809 191 930 0.0 709
MS.gene06302.t1 AT5G15450 41.418 804 373 12 65 803 166 936 0.0 605
MS.gene06302.t1 AT2G25140 43.681 728 334 11 150 812 238 954 0.0 583
MS.gene06302.t1 AT1G74310 42.958 710 326 13 152 801 162 852 0.0 550
MS.gene06302.t1 AT1G74310 43.284 670 301 13 152 761 162 812 4.09e-173 520
MS.gene06302.t1 AT4G14670 36.624 628 299 13 58 597 6 622 1.97e-107 343
MS.gene06302.t1 AT3G45450 30.675 326 168 10 58 346 5 309 4.97e-31 125

Find 185 sgRNAs with CRISPR-Local

Find 395 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATGAACTGCAGCCTTTA+TGG 0.098364 3.1:+77936490 None:intergenic
TCTTTGGCTGCATGCTATTT+TGG 0.134909 3.1:-77935745 MS.gene06302:CDS
TAACATTCTTCTTCAATTAA+TGG 0.179501 3.1:-77935368 MS.gene06302:CDS
GCAGCAGCAAATCAAATATT+TGG 0.183562 3.1:+77934555 None:intergenic
TCAAACAAAACCACAGTAAA+TGG 0.209228 3.1:+77935421 None:intergenic
ACTTGGAAGGGGTCAGTTTC+AGG 0.235139 3.1:-77937937 MS.gene06302:intron
CTAAAAGCCCGGATGATTAT+TGG 0.258261 3.1:-77936343 MS.gene06302:CDS
GACAACCGGGAGGGGAAATA+AGG 0.261671 3.1:-77937997 MS.gene06302:CDS
GTTCAGGATCAACAAAATTA+TGG 0.267481 3.1:+77940157 None:intergenic
GTTCTGCTAGAATTCTTTAT+AGG 0.277808 3.1:-77940098 MS.gene06302:intron
CATTCAGTGAGCAAGTTATT+AGG 0.278138 3.1:-77935508 MS.gene06302:CDS
TCTATCCTGTTGAGCAGTTC+TGG 0.284706 3.1:+77934913 None:intergenic
TGTTCAGTCCACGCTTAAAA+TGG 0.298769 3.1:-77936306 MS.gene06302:intron
AGAAGAATGTTAAATATATC+TGG 0.315702 3.1:+77935379 None:intergenic
CCAGCTTCACCCAGAAGAAT+TGG 0.326428 3.1:+77938493 None:intergenic
ACTAACTACGTTGATGATAA+TGG 0.326862 3.1:-77940270 MS.gene06302:CDS
TCAACTTCTCGGCCAATAAC+TGG 0.328094 3.1:+77938562 None:intergenic
GGGCTGATTGATCCAGTTAT+TGG 0.329565 3.1:-77938574 MS.gene06302:CDS
TTCTTTGAACTTCAACTTCT+CGG 0.329689 3.1:+77938551 None:intergenic
GTTAGACATGAGTGAATATA+TGG 0.330047 3.1:-77935536 MS.gene06302:CDS
TGACACTGTCTTCATTGATT+TGG 0.332043 3.1:-77934351 MS.gene06302:CDS
GCCACAGCTGCCAACTGATC+TGG 0.335594 3.1:+77938869 None:intergenic
CACGGCGGTTTCAACCTGTT+TGG 0.339833 3.1:-77936972 MS.gene06302:CDS
CTTGGATGTAGGACTATTAA+TGG 0.344112 3.1:-77938238 MS.gene06302:CDS
GAGATCTCGAGTCGGCCTTC+GGG 0.356437 3.1:-77935839 MS.gene06302:CDS
CTTAAATATTATGGTGCATC+TGG 0.366184 3.1:-77936191 MS.gene06302:CDS
TCAGCAGTGAGCTGCTGAAC+TGG 0.366254 3.1:+77935955 None:intergenic
GAGAGCATGCTTAAATATTA+TGG 0.380084 3.1:-77936200 MS.gene06302:CDS
TCTATATCACAAAGGCGTTC+TGG 0.385165 3.1:-77938770 MS.gene06302:intron
GACAAACCAACATCATATAA+TGG 0.386817 3.1:-77934979 MS.gene06302:CDS
CTCACTGCCCGTGCAAGTGT+TGG 0.393374 3.1:-77938595 MS.gene06302:CDS
TTCGTCCAGAACTGCTCAAC+AGG 0.394949 3.1:-77934918 MS.gene06302:CDS
TGATGCAATGAAGATACTTA+TGG 0.395179 3.1:-77936564 MS.gene06302:CDS
ATGAGGTCAATAGCTTTATC+AGG 0.395259 3.1:+77936437 None:intergenic
TTACTATTCTGTGGCCCAAC+TGG 0.398909 3.1:-77935793 MS.gene06302:CDS
TTCAGGAAACGGACATGATA+AGG 0.400120 3.1:-77935558 MS.gene06302:intron
CCAATTCTTCTGGGTGAAGC+TGG 0.408826 3.1:-77938493 MS.gene06302:CDS
CTTCTTCAATTAATGGAAGA+TGG 0.413133 3.1:-77935361 MS.gene06302:CDS
CTTGTTCAATCAGGGACAAC+CGG 0.414239 3.1:-77938011 MS.gene06302:CDS
GTTCACACACTTGTTCAATC+AGG 0.415130 3.1:-77938020 MS.gene06302:CDS
AAACTAAGGGAACGTGTGAT+TGG 0.431441 3.1:-77935901 MS.gene06302:CDS
AACTGAACTAGCAAAGTCTT+TGG 0.432809 3.1:-77935761 MS.gene06302:CDS
TGGCCATCTTACCGATTCTC+AGG 0.433088 3.1:-77935341 MS.gene06302:intron
ATTTCTCTCCAATAATCATC+CGG 0.433200 3.1:+77936335 None:intergenic
AGAGATCTCGAGTCGGCCTT+CGG 0.433232 3.1:-77935840 MS.gene06302:CDS
TTCTGGGTGAAGCTGGAGTT+GGG 0.435845 3.1:-77938486 MS.gene06302:CDS
CTTCTGGGTGAAGCTGGAGT+TGG 0.438875 3.1:-77938487 MS.gene06302:CDS
CAGCAAGATACATAGTTGAT+AGG 0.439208 3.1:-77936466 MS.gene06302:CDS
AGTCAAGGACCTTGTCTGTA+AGG 0.440929 3.1:-77934480 MS.gene06302:CDS
AACAGCTATTGCAGAGGGAC+TGG 0.445401 3.1:-77938461 MS.gene06302:CDS
CTCGGCTCATCAATCCAAAC+AGG 0.446079 3.1:+77936958 None:intergenic
TGCTGCTGCAAGACGTGAAA+AGG 0.453555 3.1:-77934541 MS.gene06302:CDS
ACTGGCAATTCTTATTTCTC+AGG 0.454435 3.1:-77938443 MS.gene06302:CDS
TCACTGCCCGTGCAAGTGTT+GGG 0.455417 3.1:-77938594 MS.gene06302:CDS
AAGAAGTCTTCTGTTAGATC+TGG 0.455467 3.1:-77935929 MS.gene06302:CDS
AGCCAGGTTATGTGTCCAAT+GGG 0.456669 3.1:-77938805 MS.gene06302:CDS
TTCTGTGGCCCAACTGGCGT+TGG 0.456768 3.1:-77935787 MS.gene06302:CDS
GCAAGCAATGCTTCAGCCAA+TGG 0.458378 3.1:+77934392 None:intergenic
GGGGTCTAGTGCCATTGCTA+AGG 0.463476 3.1:-77935037 MS.gene06302:CDS
AAAAGCAATCCAATTCTTCT+GGG 0.464852 3.1:-77938502 MS.gene06302:CDS
ACAGAATAGTAAAGTTGCTA+TGG 0.465089 3.1:+77935804 None:intergenic
ACAGTTGCTTCCCTCTGGTC+AGG 0.465119 3.1:-77935982 MS.gene06302:CDS
CACCTCAAAATCAATTCCTC+GGG 0.465538 3.1:+77934511 None:intergenic
TTCAATCCATTATATGATGT+TGG 0.467114 3.1:+77934973 None:intergenic
ATAAAAGATATAATAGAGTC+AGG 0.467220 3.1:-77938168 MS.gene06302:intron
GCTAGAGATGGTAGAGAGCC+AGG 0.468940 3.1:-77938821 MS.gene06302:CDS
TAGATCTGGATAATAAACTA+AGG 0.469027 3.1:-77935915 MS.gene06302:CDS
GACAAAACGTGTCATGTCCT+TGG 0.472119 3.1:-77938256 MS.gene06302:CDS
GATGTAGGACTATTAATGGC+TGG 0.472478 3.1:-77938234 MS.gene06302:CDS
TAAAGTTGCTATGGGTCTAC+CGG 0.474304 3.1:+77935813 None:intergenic
CCCAGATCAGTTGGCAGCTG+TGG 0.474446 3.1:-77938870 MS.gene06302:CDS
TGCTTAAACCTTCACTTGGA+AGG 0.478401 3.1:-77937950 MS.gene06302:CDS
CAATCAGGGACAACCGGGAG+GGG 0.479272 3.1:-77938005 MS.gene06302:CDS
CTAATAACTTGCTCACTGAA+TGG 0.479808 3.1:+77935509 None:intergenic
GGGAGGGGAAATAAGGGTTC+TGG 0.480130 3.1:-77937990 MS.gene06302:CDS
CTACCACTATTGATGAATAC+AGG 0.481152 3.1:-77937023 MS.gene06302:CDS
GCAACTGTTGCTATATGATC+AGG 0.483203 3.1:+77935997 None:intergenic
ACAACCGGGAGGGGAAATAA+GGG 0.483340 3.1:-77937996 MS.gene06302:CDS
GTTATGTTGGTTATGGAGAA+GGG 0.484795 3.1:-77935474 MS.gene06302:CDS
TCTGTGGCCCAACTGGCGTT+GGG 0.486174 3.1:-77935786 MS.gene06302:CDS
CAAGCAATGCTTCAGCCAAT+GGG 0.488172 3.1:+77934393 None:intergenic
TCTCTTCACAGATCTAGAAA+TGG 0.490279 3.1:+77935858 None:intergenic
GAGACAAATCGTTCTCAAAA+CGG 0.492726 3.1:-77940360 MS.gene06302:CDS
AGAACCCTTATTTCCCCTCC+CGG 0.496013 3.1:+77937992 None:intergenic
GATAGACACACCAATAGAAA+AGG 0.496212 3.1:+77938409 None:intergenic
TATAACAAGGGTGTTACCAT+TGG 0.496267 3.1:+77934325 None:intergenic
GCTTAAACCTTCACTTGGAA+GGG 0.497310 3.1:-77937949 MS.gene06302:CDS
ATATACAGAAGATGCCATAA+AGG 0.500415 3.1:-77936504 MS.gene06302:CDS
TCTCCATAACCAACATAACC+TGG 0.501731 3.1:+77935478 None:intergenic
GAGGTCTAGCACCATATGTT+GGG 0.502338 3.1:+77934447 None:intergenic
CCACAGCTGCCAACTGATCT+GGG 0.502623 3.1:+77938870 None:intergenic
TAGCAACAGTTGCTTCCCTC+TGG 0.507727 3.1:-77935987 MS.gene06302:CDS
GTACCAAAAGAAAACGGAAC+AGG 0.507840 3.1:+77940225 None:intergenic
ATGTAGGACTATTAATGGCT+GGG 0.511098 3.1:-77938233 MS.gene06302:CDS
AAACTTAATTGCAAACCCAT+TGG 0.514028 3.1:-77934408 MS.gene06302:CDS
GAAGGCTATGACCCAACATA+TGG 0.515298 3.1:-77934458 MS.gene06302:CDS
TACGCACACCATATCATGCT+TGG 0.519026 3.1:-77940402 None:intergenic
AAGCCTGTATTCATCAATAG+TGG 0.519791 3.1:+77937020 None:intergenic
CGAGTCGGCCTTCGGGATCC+CGG 0.521425 3.1:-77935832 MS.gene06302:CDS
GCATCGGCAAACCTGAGAAT+CGG 0.527994 3.1:+77935330 None:intergenic
GATGCAATGAAGATACTTAT+GGG 0.528454 3.1:-77936563 MS.gene06302:CDS
ATCTGAAATGAAGAAACCTA+TGG 0.528568 3.1:+77935002 None:intergenic
CATATGGTGCTAGACCTCTC+AGG 0.531368 3.1:-77934442 MS.gene06302:CDS
AAACCTGAGAATCGGTAAGA+TGG 0.531639 3.1:+77935338 None:intergenic
ACACCTCAAAATCAATTCCT+CGG 0.532915 3.1:+77934510 None:intergenic
TCATCCCCTTGAAAAGCCAC+AGG 0.534299 3.1:-77934875 MS.gene06302:intron
TACTTCCTGCTTCATCAATG+AGG 0.539893 3.1:+77936420 None:intergenic
AGAGGTCTAGCACCATATGT+TGG 0.540703 3.1:+77934446 None:intergenic
GGTTATGTTGGTTATGGAGA+AGG 0.541808 3.1:-77935475 MS.gene06302:CDS
GGGTCTAGTGCCATTGCTAA+GGG 0.542537 3.1:-77935036 MS.gene06302:CDS
CTTAAACCTTCACTTGGAAG+GGG 0.543263 3.1:-77937948 MS.gene06302:CDS
ATTGACCTCATTGATGAAGC+AGG 0.544458 3.1:-77936425 MS.gene06302:CDS
CAATCAGCCCAACACTTGCA+CGG 0.544552 3.1:+77938587 None:intergenic
AAAAGAGAGAGGAGAGCTAG+AGG 0.545345 3.1:-77938208 MS.gene06302:CDS
TTGCATACTCTCTAAAAGCC+CGG 0.546522 3.1:-77936354 MS.gene06302:CDS
AAGGACCTTGTCTGTAAGGA+AGG 0.546851 3.1:-77934476 MS.gene06302:CDS
AAAATCAATTCCTCGGGGCA+TGG 0.547293 3.1:+77934517 None:intergenic
CGTGTCATGTCCTTGGATGT+AGG 0.548440 3.1:-77938249 MS.gene06302:CDS
ATATAAAGTGCAACCTCACT+CGG 0.551522 3.1:+77936940 None:intergenic
TGAGTCAAGTATGAGTTCAC+TGG 0.553540 3.1:+77936157 None:intergenic
CGTTTAGTACCAAAAGAAAA+CGG 0.553800 3.1:+77940219 None:intergenic
AACTGACCCCTTCCAAGTGA+AGG 0.554059 3.1:+77937942 None:intergenic
CAGAATAGTAAAGTTGCTAT+GGG 0.554764 3.1:+77935805 None:intergenic
GAGCCAGGTTATGTGTCCAA+TGG 0.555649 3.1:-77938806 MS.gene06302:CDS
CGGGTCAAACCCAGATCAGT+TGG 0.556987 3.1:-77938879 MS.gene06302:CDS
TACTCAAGGGTGACTTGTGT+CGG 0.559111 3.1:+77934274 None:intergenic
CTCCATAACCAACATAACCT+GGG 0.561726 3.1:+77935479 None:intergenic
TTTCTCTCCAATAATCATCC+GGG 0.562344 3.1:+77936336 None:intergenic
AAAGCAACGAAAATATGTTC+AGG 0.563495 3.1:+77940141 None:intergenic
AACTGGAATTCCTGACCAGA+GGG 0.563796 3.1:+77935972 None:intergenic
CTTCTGTATATCTGCACTTG+TGG 0.566189 3.1:+77936516 None:intergenic
TTCACACACTTGTTCAATCA+GGG 0.566651 3.1:-77938019 MS.gene06302:CDS
GCTTTGATGAAAGTTGATGA+TGG 0.573069 3.1:-77940123 MS.gene06302:CDS
AATTTGCTTAAACCTTCACT+TGG 0.579870 3.1:-77937954 MS.gene06302:CDS
AATCAGCCCAACACTTGCAC+GGG 0.580208 3.1:+77938588 None:intergenic
GATCAAGCTGATTTATAACA+AGG 0.584174 3.1:+77934312 None:intergenic
TTCATTGATTTGGATGCCAA+TGG 0.585414 3.1:-77934341 MS.gene06302:CDS
TTGTTCAATCAGGGACAACC+GGG 0.588641 3.1:-77938010 MS.gene06302:CDS
TATGTTGGTTATGGAGAAGG+GGG 0.590352 3.1:-77935472 MS.gene06302:CDS
TCAATCAGGGACAACCGGGA+GGG 0.591333 3.1:-77938006 MS.gene06302:CDS
AAGGGTCGACACAACTCCAT+AGG 0.595796 3.1:-77935018 MS.gene06302:CDS
GGAACGTGTGATTGGACAAG+AGG 0.597583 3.1:-77935893 MS.gene06302:CDS
CTTGCTGAAAAGTGCAAGGA+AGG 0.599268 3.1:-77934374 MS.gene06302:CDS
GTTTGCAATTAAGTTTACAA+TGG 0.599993 3.1:+77934415 None:intergenic
TGTAGGACTATTAATGGCTG+GGG 0.603871 3.1:-77938232 MS.gene06302:CDS
AGATCTGGATAATAAACTAA+GGG 0.604041 3.1:-77935914 MS.gene06302:CDS
TGAGGTGTCTGAATCAGTCA+AGG 0.607039 3.1:-77934495 MS.gene06302:CDS
TGGGTCTACCGGGATCCCGA+AGG 0.609108 3.1:+77935824 None:intergenic
GGTGGTGATGACTTCAAATG+TGG 0.611159 3.1:-77935058 MS.gene06302:CDS
TTAGTTGAATCATTGAGATG+AGG 0.614874 3.1:+77940288 None:intergenic
CATTAATAGTCCTACATCCA+AGG 0.615573 3.1:+77938239 None:intergenic
GCTCAACAGGATAGATGAAG+TGG 0.616515 3.1:-77934905 MS.gene06302:CDS
ATAGCAACTTTACTATTCTG+TGG 0.617864 3.1:-77935802 MS.gene06302:CDS
TAGAAGAAAACCATTTACTG+TGG 0.618481 3.1:-77935431 MS.gene06302:CDS
ATATAATGGATTGAAATCGA+TGG 0.619461 3.1:-77934965 MS.gene06302:CDS
TTATGGTGCATCTGGCATTG+AGG 0.619554 3.1:-77936183 MS.gene06302:CDS
CATAGCCTTCCTTACAGACA+AGG 0.620402 3.1:+77934471 None:intergenic
ACGTGTGATTGGACAAGAGG+AGG 0.625107 3.1:-77935890 MS.gene06302:CDS
ATCAAGCTGATTTATAACAA+GGG 0.625901 3.1:+77934313 None:intergenic
GGGAAAACAGCTATTGCAGA+GGG 0.636174 3.1:-77938466 MS.gene06302:CDS
GTGGTGATGACTTCAAATGT+GGG 0.637406 3.1:-77935057 MS.gene06302:CDS
TTATGTTGGTTATGGAGAAG+GGG 0.637629 3.1:-77935473 MS.gene06302:CDS
ATTGCTTGCTGAAAAGTGCA+AGG 0.637883 3.1:-77934378 MS.gene06302:CDS
TTCAATCAGGGACAACCGGG+AGG 0.637993 3.1:-77938007 MS.gene06302:CDS
GAACTGGAATTCCTGACCAG+AGG 0.642699 3.1:+77935971 None:intergenic
ATGGCTGGGGCAAAAGAGAG+AGG 0.645640 3.1:-77938219 MS.gene06302:CDS
AAAGTTGCTATGGGTCTACC+GGG 0.647341 3.1:+77935814 None:intergenic
TGCTCTATCACAATTCTGCG+TGG 0.649091 3.1:-77938620 MS.gene06302:CDS
TTTACAATGGCTCTCCTGAG+AGG 0.650300 3.1:+77934428 None:intergenic
CCAGGTTATGTGTCCAATGG+GGG 0.650317 3.1:-77938803 MS.gene06302:CDS
CGATGGTAATTGAAGAACTG+AGG 0.650720 3.1:-77934948 MS.gene06302:CDS
TCCATAACCAACATAACCTG+GGG 0.651186 3.1:+77935480 None:intergenic
GCCAGGTTATGTGTCCAATG+GGG 0.659821 3.1:-77938804 MS.gene06302:CDS
AAAAGGATAAGGCTTTGGCA+CGG 0.663550 3.1:-77936990 MS.gene06302:CDS
TTGGATTGATGAGCCGAGTG+AGG 0.663720 3.1:-77936953 MS.gene06302:intron
GTTGTGTCGACCCTTAGCAA+TGG 0.675286 3.1:+77935026 None:intergenic
TGGGAAAACAGCTATTGCAG+AGG 0.677479 3.1:-77938467 MS.gene06302:CDS
ACAACAAATCTATATCACAA+AGG 0.686685 3.1:-77938778 MS.gene06302:CDS
TGGTGATGACTTCAAATGTG+GGG 0.688027 3.1:-77935056 MS.gene06302:CDS
AGGATAAGGCTTTGGCACGG+CGG 0.694664 3.1:-77936987 MS.gene06302:CDS
CAACAGGATAGATGAAGTGG+TGG 0.695003 3.1:-77934902 MS.gene06302:CDS
ACCTCAAAATCAATTCCTCG+GGG 0.719499 3.1:+77934512 None:intergenic
TCTGTGAAGAGATCTCGAGT+CGG 0.722132 3.1:-77935847 MS.gene06302:CDS
GTGAAAAGGACCATGCCCCG+AGG 0.751275 3.1:-77934527 MS.gene06302:CDS
CCATAACCAACATAACCTGG+GGG 0.752062 3.1:+77935481 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAATAAACATAAAAATTT+AGG + chr3.1:77939537-77939556 None:intergenic 10.0%
!! ACAATAAACATAAAAATTTA+GGG + chr3.1:77939536-77939555 None:intergenic 10.0%
!! AACAAAAGAAAAACAAATAT+TGG + chr3.1:77935628-77935647 None:intergenic 15.0%
!! AGATAGAAACATATTAATTA+AGG + chr3.1:77936343-77936362 None:intergenic 15.0%
!! AGATCAAATTATGATTAAAA+TGG + chr3.1:77938049-77938068 None:intergenic 15.0%
!! CAATTTAAATTCAACTTTAA+AGG - chr3.1:77935064-77935083 MS.gene06302:CDS 15.0%
!! TAGTTTGAAAAATATTCTTT+GGG - chr3.1:77935514-77935533 MS.gene06302:CDS 15.0%
!! TCTTTGCAATAAATAATTAA+GGG + chr3.1:77937881-77937900 None:intergenic 15.0%
!! TTAAATTTAACTGCTTAAAA+CGG + chr3.1:77939955-77939974 None:intergenic 15.0%
!! TTAAGATTGTTATAGAAAAA+AGG - chr3.1:77937933-77937952 MS.gene06302:intron 15.0%
!!! ATTATTTAGTCATTTTTGTT+TGG - chr3.1:77939908-77939927 MS.gene06302:intron 15.0%
!! AAGCAGTTAAATTTAAATAC+TGG - chr3.1:77939959-77939978 MS.gene06302:intron 20.0%
!! ACTTATAATACATTTCCATT+TGG - chr3.1:77934614-77934633 MS.gene06302:intron 20.0%
!! AGAAGAATGTTAAATATATC+TGG + chr3.1:77939288-77939307 None:intergenic 20.0%
!! AGTTTCATTTAAAAATGCAT+TGG - chr3.1:77939585-77939604 MS.gene06302:intron 20.0%
!! AGTTTGAAAAATATTCTTTG+GGG - chr3.1:77935515-77935534 MS.gene06302:CDS 20.0%
!! ATAAAAGATATAATAGAGTC+AGG - chr3.1:77936496-77936515 MS.gene06302:CDS 20.0%
!! ATAAATATTCAAGTATCACT+TGG + chr3.1:77936795-77936814 None:intergenic 20.0%
!! ATGTTTATTGTTTGAAAAAC+TGG - chr3.1:77939545-77939564 MS.gene06302:intron 20.0%
!! CTAGTTTGAAAAATATTCTT+TGG - chr3.1:77935513-77935532 MS.gene06302:CDS 20.0%
!! CTCTTTGCAATAAATAATTA+AGG + chr3.1:77937882-77937901 None:intergenic 20.0%
!! TAACATTCTTCTTCAATTAA+TGG - chr3.1:77939296-77939315 MS.gene06302:intron 20.0%
!!! ATGAATTTTTCTTGAATAGT+TGG - chr3.1:77937466-77937485 MS.gene06302:intron 20.0%
!!! CTTTTATTAATTTTGTAACG+CGG + chr3.1:77936483-77936502 None:intergenic 20.0%
!!! TCCATATATTTTCATGTTTA+AGG - chr3.1:77937239-77937258 MS.gene06302:intron 20.0%
!!! TGATCATTTTTGTATAAGAT+GGG - chr3.1:77937524-77937543 MS.gene06302:intron 20.0%
!!! TGTTTATGATTTGATTTTGA+TGG - chr3.1:77935964-77935983 MS.gene06302:CDS 20.0%
!!! TTAATATGTTTCTATCTACT+TGG - chr3.1:77936346-77936365 MS.gene06302:CDS 20.0%
!!! TTTGTTTTTCTTTTGTTTTG+TGG - chr3.1:77935631-77935650 MS.gene06302:intron 20.0%
!!! TTTTGTAATTTTAATTGGGA+GGG - chr3.1:77937360-77937379 MS.gene06302:intron 20.0%
!!! TTTTTGTAATTTTAATTGGG+AGG - chr3.1:77937359-77937378 MS.gene06302:intron 20.0%
!!! TTTTTTTGGCATTAATAATG+AGG - chr3.1:77938968-77938987 MS.gene06302:intron 20.0%
! AACTTATCGAAGTACATATT+TGG + chr3.1:77935169-77935188 None:intergenic 25.0%
! AAGTTGTCTTTATGAAATAC+TGG - chr3.1:77937000-77937019 MS.gene06302:CDS 25.0%
! ACAACAAATCTATATCACAA+AGG - chr3.1:77935886-77935905 MS.gene06302:CDS 25.0%
! ACTAGCAATTGTTTATTTGA+TGG + chr3.1:77936834-77936853 None:intergenic 25.0%
! AGAAACTTATTTGAACCAAA+TGG - chr3.1:77934735-77934754 MS.gene06302:intron 25.0%
! AGAGAAAGTTTCATGTTTAA+AGG + chr3.1:77939395-77939414 None:intergenic 25.0%
! AGATCTGGATAATAAACTAA+GGG - chr3.1:77938750-77938769 MS.gene06302:intron 25.0%
! AGCATACACATAAAAAAACT+TGG + chr3.1:77940017-77940036 None:intergenic 25.0%
! AGTTGTCTTTATGAAATACT+GGG - chr3.1:77937001-77937020 MS.gene06302:CDS 25.0%
! ATACATTTCCATTTGGTATT+TGG - chr3.1:77934621-77934640 MS.gene06302:intron 25.0%
! ATATGTACTTCGATAAGTTT+CGG - chr3.1:77935170-77935189 MS.gene06302:intron 25.0%
! ATCAAATGTACCAAGTTTAT+TGG - chr3.1:77937965-77937984 MS.gene06302:CDS 25.0%
! ATTCAAGAAAAATTCATCAG+AGG + chr3.1:77937463-77937482 None:intergenic 25.0%
! CATTTCTATATCTTCCTTTA+CGG - chr3.1:77939418-77939437 MS.gene06302:intron 25.0%
! GAGAAAGTTTCATGTTTAAA+GGG + chr3.1:77939394-77939413 None:intergenic 25.0%
! GATGTGAATCTTAATTTACT+AGG - chr3.1:77939358-77939377 MS.gene06302:intron 25.0%
! GCCTTAAACATGAAAATATA+TGG + chr3.1:77937243-77937262 None:intergenic 25.0%
! GTTCAATTATATTATGCAGT+CGG - chr3.1:77937488-77937507 MS.gene06302:intron 25.0%
! GTTTGCAATTAAGTTTACAA+TGG + chr3.1:77940252-77940271 None:intergenic 25.0%
! TAGATCTGGATAATAAACTA+AGG - chr3.1:77938749-77938768 MS.gene06302:intron 25.0%
! TGGTTCAAATAAGTTTCTTT+AGG + chr3.1:77934733-77934752 None:intergenic 25.0%
! TTAAACATGAAACTTTCTCT+TGG - chr3.1:77939395-77939414 MS.gene06302:intron 25.0%
! TTATTCATAGTGACAAGTTA+TGG + chr3.1:77937594-77937613 None:intergenic 25.0%
! TTCAATCCATTATATGATGT+TGG + chr3.1:77939694-77939713 None:intergenic 25.0%
! TTCATTTAAAAATGCATTGG+TGG - chr3.1:77939588-77939607 MS.gene06302:intron 25.0%
!! ACAGTTACTTTGAAAAATGT+TGG + chr3.1:77936924-77936943 None:intergenic 25.0%
!! ATCAAGCTGATTTATAACAA+GGG + chr3.1:77940354-77940373 None:intergenic 25.0%
!! ATCTAAAATCGTAAGACAAA+TGG + chr3.1:77935353-77935372 None:intergenic 25.0%
!! CAGTTACTTTGAAAAATGTT+GGG + chr3.1:77936923-77936942 None:intergenic 25.0%
!! TTTTTCTCATATTCATTCTC+TGG - chr3.1:77936004-77936023 MS.gene06302:CDS 25.0%
!!! ATATAATGGATTGAAATCGA+TGG - chr3.1:77939699-77939718 MS.gene06302:intron 25.0%
!!! GAACTTTTTAAGAATAATGC+TGG - chr3.1:77934896-77934915 MS.gene06302:CDS 25.0%
!!! GTGATCATTTTTGTATAAGA+TGG - chr3.1:77937523-77937542 MS.gene06302:intron 25.0%
!!! GTGTTCTTTTTTCATCTTAA+AGG + chr3.1:77938285-77938304 None:intergenic 25.0%
!!! TTCTTTGGGGTAAAATTTTA+AGG - chr3.1:77935528-77935547 MS.gene06302:CDS 25.0%
!!! TTGAAAAACTGGTTCTAATA+GGG - chr3.1:77939556-77939575 MS.gene06302:intron 25.0%
!!! TTTGAAAAACTGGTTCTAAT+AGG - chr3.1:77939555-77939574 MS.gene06302:intron 25.0%
AAAAAGCAATCCAATTCTTC+TGG - chr3.1:77936161-77936180 MS.gene06302:CDS 30.0%
AAAAGCAATCCAATTCTTCT+GGG - chr3.1:77936162-77936181 MS.gene06302:CDS 30.0%
AAACTAGTTATGCAACTCAA+AGG + chr3.1:77935500-77935519 None:intergenic 30.0%
AAACTTAATTGCAAACCCAT+TGG - chr3.1:77940256-77940275 MS.gene06302:CDS 30.0%
AAAGCAACGAAAATATGTTC+AGG + chr3.1:77934526-77934545 None:intergenic 30.0%
AATACTCTCCAAATACCAAA+TGG + chr3.1:77934632-77934651 None:intergenic 30.0%
ACAGAATAGTAAAGTTGCTA+TGG + chr3.1:77938863-77938882 None:intergenic 30.0%
ACCAAACAAACCAATAAACT+TGG + chr3.1:77937978-77937997 None:intergenic 30.0%
ACGTATAAGATTAAGGTTAG+AGG - chr3.1:77936855-77936874 MS.gene06302:intron 30.0%
AGTTATATTCAACAACGCTA+AGG - chr3.1:77937279-77937298 MS.gene06302:intron 30.0%
ATAGCAACTTTACTATTCTG+TGG - chr3.1:77938862-77938881 MS.gene06302:CDS 30.0%
ATATACAGAAGATGCCATAA+AGG - chr3.1:77938160-77938179 MS.gene06302:intron 30.0%
ATGAACTATGTCATATTGTC+CGG + chr3.1:77935234-77935253 None:intergenic 30.0%
ATTAAGATTCACATCAGCAT+CGG + chr3.1:77939353-77939372 None:intergenic 30.0%
ATTGCAAAGAGAGAAATAGA+TGG - chr3.1:77937891-77937910 MS.gene06302:intron 30.0%
ATTTCTCTCCAATAATCATC+CGG + chr3.1:77938332-77938351 None:intergenic 30.0%
CAAAGTCAATCTCAATTTGT+CGG - chr3.1:77935418-77935437 MS.gene06302:CDS 30.0%
CAAGATTAGCATTTAACATC+TGG - chr3.1:77936950-77936969 MS.gene06302:intron 30.0%
CAGAATAGTAAAGTTGCTAT+GGG + chr3.1:77938862-77938881 None:intergenic 30.0%
CATACTATCATTTCAGGAAA+CGG - chr3.1:77939095-77939114 MS.gene06302:intron 30.0%
CGTTTAGTACCAAAAGAAAA+CGG + chr3.1:77934448-77934467 None:intergenic 30.0%
CTTAAATATTATGGTGCATC+TGG - chr3.1:77938473-77938492 MS.gene06302:CDS 30.0%
CTTCTTCAATTAATGGAAGA+TGG - chr3.1:77939303-77939322 MS.gene06302:intron 30.0%
GACAAACCAACATCATATAA+TGG - chr3.1:77939685-77939704 MS.gene06302:intron 30.0%
GAGTTGTGTTAATATATGTG+TGG - chr3.1:77936547-77936566 MS.gene06302:CDS 30.0%
GATAACCAAGAAACAAATGT+TGG - chr3.1:77934842-77934861 MS.gene06302:intron 30.0%
GATGCAATGAAGATACTTAT+GGG - chr3.1:77938101-77938120 MS.gene06302:intron 30.0%
GCTAGTAACGTATAAGATTA+AGG - chr3.1:77936848-77936867 MS.gene06302:intron 30.0%
GTTAGACATGAGTGAATATA+TGG - chr3.1:77939128-77939147 MS.gene06302:intron 30.0%
GTTCAGGATCAACAAAATTA+TGG + chr3.1:77934510-77934529 None:intergenic 30.0%
GTTCTGCTAGAATTCTTTAT+AGG - chr3.1:77934566-77934585 MS.gene06302:intron 30.0%
GTTTCTTGGTTATCATTGAT+TGG + chr3.1:77934836-77934855 None:intergenic 30.0%
TAGAAGAAAACCATTTACTG+TGG - chr3.1:77939233-77939252 MS.gene06302:intron 30.0%
TAGTCTGACAACCAATTAAA+CGG + chr3.1:77934990-77935009 None:intergenic 30.0%
TATGCAAATGATTTCAGACT+CGG - chr3.1:77935765-77935784 MS.gene06302:CDS 30.0%
TCAAACAAAACCACAGTAAA+TGG + chr3.1:77939246-77939265 None:intergenic 30.0%
TCCTGAAATGATAGTATGAA+AGG + chr3.1:77939093-77939112 None:intergenic 30.0%
TGATGCAATGAAGATACTTA+TGG - chr3.1:77938100-77938119 MS.gene06302:intron 30.0%
TGTGCATATCTATCTAGATT+TGG - chr3.1:77938595-77938614 MS.gene06302:CDS 30.0%
TTAGTTGAATCATTGAGATG+AGG + chr3.1:77934379-77934398 None:intergenic 30.0%
TTCTTTGAACTTCAACTTCT+CGG + chr3.1:77936116-77936135 None:intergenic 30.0%
TTGCATACTAGCAACATTAA+TGG + chr3.1:77935752-77935771 None:intergenic 30.0%
! AATAGCCAACATTTGTTTCT+TGG + chr3.1:77934850-77934869 None:intergenic 30.0%
! AATTTGCTTAAACCTTCACT+TGG - chr3.1:77936710-77936729 MS.gene06302:intron 30.0%
! ATCTGAAATGAAGAAACCTA+TGG + chr3.1:77939665-77939684 None:intergenic 30.0%
! CTGACATGTTATTGTGTTTT+AGG - chr3.1:77938629-77938648 MS.gene06302:CDS 30.0%
! GAGAGCATGCTTAAATATTA+TGG - chr3.1:77938464-77938483 MS.gene06302:CDS 30.0%
! GATCAAGCTGATTTATAACA+AGG + chr3.1:77940355-77940374 None:intergenic 30.0%
! TCGTAAGACAAATGGTATTT+TGG + chr3.1:77935345-77935364 None:intergenic 30.0%
! TGGTTTTCTTCTAATAGCTT+CGG + chr3.1:77939226-77939245 None:intergenic 30.0%
! TTCTAGTACATGTAACCTTT+TGG + chr3.1:77937123-77937142 None:intergenic 30.0%
!! ACCAAGTTTATTGGTTTGTT+TGG - chr3.1:77937974-77937993 MS.gene06302:CDS 30.0%
!! ACTAACTACGTTGATGATAA+TGG - chr3.1:77934394-77934413 MS.gene06302:CDS 30.0%
!! ATACAGGCTTCATTTTGAAA+AGG - chr3.1:77937657-77937676 MS.gene06302:intron 30.0%
!! GATTTGATTTTGATGGTTGA+AGG - chr3.1:77935971-77935990 MS.gene06302:CDS 30.0%
!! GCTTCATTTTGAAAAGGATA+AGG - chr3.1:77937663-77937682 MS.gene06302:intron 30.0%
!! GTTTTAGGTGTATAGAAGTT+AGG - chr3.1:77938644-77938663 MS.gene06302:intron 30.0%
!! TTTTGAAAAGGATAAGGCTT+TGG - chr3.1:77937669-77937688 MS.gene06302:intron 30.0%
!!! ATCTAGATTTGGTTTTTGAG+TGG - chr3.1:77938606-77938625 MS.gene06302:CDS 30.0%
!!! CATTAGCTTTTTAAAGAGTG+TGG - chr3.1:77935581-77935600 MS.gene06302:intron 30.0%
!!! TGTCGGTGAAACAATTTTTT+GGG - chr3.1:77935435-77935454 MS.gene06302:CDS 30.0%
!!! TTGGAGAGTATTGTTGTTTT+TGG - chr3.1:77934640-77934659 MS.gene06302:intron 30.0%
!!! TTGGATTGCTTTTTGTCTTT+CGG + chr3.1:77936155-77936174 None:intergenic 30.0%
!!! TTGTCGGTGAAACAATTTTT+TGG - chr3.1:77935434-77935453 MS.gene06302:CDS 30.0%
!!! TTTCTTGCCTTTTGTTTTAG+CGG + chr3.1:77935931-77935950 None:intergenic 30.0%
AAACTAGCAGATGAGATTAC+AGG + chr3.1:77936764-77936783 None:intergenic 35.0%
AACTAGCAGATGAGATTACA+GGG + chr3.1:77936763-77936782 None:intergenic 35.0%
AACTGAACTAGCAAAGTCTT+TGG - chr3.1:77938903-77938922 MS.gene06302:intron 35.0%
AAGAAGTCTTCTGTTAGATC+TGG - chr3.1:77938735-77938754 MS.gene06302:intron 35.0%
AAGCCTGTATTCATCAATAG+TGG + chr3.1:77937647-77937666 None:intergenic 35.0%
ACACCTCAAAATCAATTCCT+CGG + chr3.1:77940157-77940176 None:intergenic 35.0%
ACTCAAAGGACTTATAAACC+AGG + chr3.1:77935486-77935505 None:intergenic 35.0%
AGATATGAGTGAGTGTTAAC+TGG - chr3.1:77937066-77937085 MS.gene06302:intron 35.0%
AGTTGACATTTCTTACTCTC+AGG - chr3.1:77938436-77938455 MS.gene06302:CDS 35.0%
ATAAAATTCCAACAGCAGAG+AGG + chr3.1:77937337-77937356 None:intergenic 35.0%
ATATAAAGTGCAACCTCACT+CGG + chr3.1:77937727-77937746 None:intergenic 35.0%
ATATTTGGAAACACAGCCAA+TGG + chr3.1:77935154-77935173 None:intergenic 35.0%
ATGCAAATGATTTCAGACTC+GGG - chr3.1:77935766-77935785 MS.gene06302:CDS 35.0%
ATGTAGGACTATTAATGGCT+GGG - chr3.1:77936431-77936450 MS.gene06302:CDS 35.0%
CAGCAAGATACATAGTTGAT+AGG - chr3.1:77938198-77938217 MS.gene06302:CDS 35.0%
CATTAATAGTCCTACATCCA+AGG + chr3.1:77936428-77936447 None:intergenic 35.0%
CATTCAGTGAGCAAGTTATT+AGG - chr3.1:77939156-77939175 MS.gene06302:intron 35.0%
CATTTCAGAACATCGAAAAG+AGG + chr3.1:77939015-77939034 None:intergenic 35.0%
CTACCACTATTGATGAATAC+AGG - chr3.1:77937641-77937660 MS.gene06302:intron 35.0%
CTTGGATGTAGGACTATTAA+TGG - chr3.1:77936426-77936445 MS.gene06302:CDS 35.0%
GAGACAAATCGTTCTCAAAA+CGG - chr3.1:77934304-77934323 MS.gene06302:CDS 35.0%
GATAGACACACCAATAGAAA+AGG + chr3.1:77936258-77936277 None:intergenic 35.0%
GCAGCAGCAAATCAAATATT+TGG + chr3.1:77940112-77940131 None:intergenic 35.0%
GCATTTAACATCTGGAAAGT+AGG - chr3.1:77936958-77936977 MS.gene06302:CDS 35.0%
GCCTTTCATACTATCATTTC+AGG - chr3.1:77939089-77939108 MS.gene06302:intron 35.0%
GGACAATATGACATAGTTCA+TGG - chr3.1:77935233-77935252 MS.gene06302:intron 35.0%
TAATAGACTCACTGCTTAGA+TGG - chr3.1:77937040-77937059 MS.gene06302:intron 35.0%
TACAAAAGCGACAGTTACAA+AGG + chr3.1:77937785-77937804 None:intergenic 35.0%
TCAAGTATCACTTGGAACAA+AGG + chr3.1:77936787-77936806 None:intergenic 35.0%
TCTCTTCACAGATCTAGAAA+TGG + chr3.1:77938809-77938828 None:intergenic 35.0%
TGAGGGCAAATTTGTATGTT+CGG - chr3.1:77937179-77937198 MS.gene06302:intron 35.0%
TGTCTTTATGAAATACTGGG+AGG - chr3.1:77937004-77937023 MS.gene06302:CDS 35.0%
TTAACATCTGGAAAGTAGGA+AGG - chr3.1:77936962-77936981 MS.gene06302:CDS 35.0%
TTCAAGACTACAAAAAGAGC+TGG - chr3.1:77935821-77935840 MS.gene06302:CDS 35.0%
TTCACACACTTGTTCAATCA+GGG - chr3.1:77936645-77936664 MS.gene06302:intron 35.0%
TTTCTCTCCAATAATCATCC+GGG + chr3.1:77938331-77938350 None:intergenic 35.0%
! AACTGTGTGTTGTTGTGTAT+AGG - chr3.1:77938076-77938095 MS.gene06302:intron 35.0%
! ACTGGCAATTCTTATTTCTC+AGG - chr3.1:77936221-77936240 MS.gene06302:intron 35.0%
! AGAAGTGTAGTAACTGTAAC+TGG + chr3.1:77936897-77936916 None:intergenic 35.0%
! AGAAGTTGCTCCTTTTCTAT+TGG - chr3.1:77936245-77936264 MS.gene06302:intron 35.0%
! ATGTTTAAGGCTGTGAATAC+TGG - chr3.1:77937252-77937271 MS.gene06302:intron 35.0%
! CAAAACGGTTTTCTTGATTC+TGG - chr3.1:77934319-77934338 MS.gene06302:CDS 35.0%
! GTTATGTTGGTTATGGAGAA+GGG - chr3.1:77939190-77939209 MS.gene06302:intron 35.0%
! GTTTTGTGGCAATAATGATC+TGG - chr3.1:77935645-77935664 MS.gene06302:intron 35.0%
! TGACACTGTCTTCATTGATT+TGG - chr3.1:77940313-77940332 MS.gene06302:CDS 35.0%
! TGAGATTGGTAATTGGGATT+TGG - chr3.1:77935194-77935213 MS.gene06302:intron 35.0%
! TTATGTTGGTTATGGAGAAG+GGG - chr3.1:77939191-77939210 MS.gene06302:intron 35.0%
! TTGTTTGGAGAGAGTAGTTT+TGG - chr3.1:77937388-77937407 MS.gene06302:intron 35.0%
!! ATGAGGTCAATAGCTTTATC+AGG + chr3.1:77938230-77938249 None:intergenic 35.0%
!! CTAATAACTTGCTCACTGAA+TGG + chr3.1:77939158-77939177 None:intergenic 35.0%
!! GCTTTGATGAAAGTTGATGA+TGG - chr3.1:77934541-77934560 MS.gene06302:CDS 35.0%
!! GTTTTGGACTTTGAATTCTC+TGG - chr3.1:77937404-77937423 MS.gene06302:intron 35.0%
!! TATAACAAGGGTGTTACCAT+TGG + chr3.1:77940342-77940361 None:intergenic 35.0%
!! TTCATTGATTTGGATGCCAA+TGG - chr3.1:77940323-77940342 MS.gene06302:CDS 35.0%
!!! AGAGGATTGTTTTAGCTCAT+CGG - chr3.1:77936579-77936598 MS.gene06302:intron 35.0%
!!! TCACACAAGGTGTGTTTTTT+TGG - chr3.1:77938954-77938973 MS.gene06302:intron 35.0%
AAACCTGAGAATCGGTAAGA+TGG + chr3.1:77939329-77939348 None:intergenic 40.0%
AAACTAAGGGAACGTGTGAT+TGG - chr3.1:77938763-77938782 MS.gene06302:intron 40.0%
AAAGAATGACATCACCTGCA+AGG + chr3.1:77936613-77936632 None:intergenic 40.0%
ACCTCAAAATCAATTCCTCG+GGG + chr3.1:77940155-77940174 None:intergenic 40.0%
ACTTTGACCAGAGTATGCAA+GGG + chr3.1:77935404-77935423 None:intergenic 40.0%
ATTGACCTCATTGATGAAGC+AGG - chr3.1:77938239-77938258 MS.gene06302:CDS 40.0%
CAAATGAACTGCAGCCTTTA+TGG + chr3.1:77938177-77938196 None:intergenic 40.0%
CACCTCAAAATCAATTCCTC+GGG + chr3.1:77940156-77940175 None:intergenic 40.0%
CCTTATAGCGACAGCTAAAA+CGG - chr3.1:77938010-77938029 MS.gene06302:CDS 40.0%
CGATGGTAATTGAAGAACTG+AGG - chr3.1:77939716-77939735 MS.gene06302:intron 40.0%
CTAAAAGCCCGGATGATTAT+TGG - chr3.1:77938321-77938340 MS.gene06302:intron 40.0%
CTCCATAACCAACATAACCT+GGG + chr3.1:77939188-77939207 None:intergenic 40.0%
CTTAAACCTTCACTTGGAAG+GGG - chr3.1:77936716-77936735 MS.gene06302:intron 40.0%
CTTCTGTATATCTGCACTTG+TGG + chr3.1:77938151-77938170 None:intergenic 40.0%
GACAGTTACAAAGGAGAAGA+GGG + chr3.1:77937776-77937795 None:intergenic 40.0%
GATCGGTAAGTATTCACACA+AGG - chr3.1:77938941-77938960 MS.gene06302:intron 40.0%
GATGTAGGACTATTAATGGC+TGG - chr3.1:77936430-77936449 MS.gene06302:CDS 40.0%
GCAACTGTTGCTATATGATC+AGG + chr3.1:77938670-77938689 None:intergenic 40.0%
GCAATCTGTTGCTGAAATGA+GGG - chr3.1:77937162-77937181 MS.gene06302:intron 40.0%
GCCTCCAAAGTGAATATCAT+CGG + chr3.1:77939858-77939877 None:intergenic 40.0%
GCTTAAACCTTCACTTGGAA+GGG - chr3.1:77936715-77936734 MS.gene06302:intron 40.0%
GTACCAAAAGAAAACGGAAC+AGG + chr3.1:77934442-77934461 None:intergenic 40.0%
GTCCACGCTTAAAATGGTAA+TGG - chr3.1:77938364-77938383 MS.gene06302:intron 40.0%
GTTCACACACTTGTTCAATC+AGG - chr3.1:77936644-77936663 MS.gene06302:intron 40.0%
TAAAGTTGCTATGGGTCTAC+CGG + chr3.1:77938854-77938873 None:intergenic 40.0%
TACTTCCTGCTTCATCAATG+AGG + chr3.1:77938247-77938266 None:intergenic 40.0%
TACTTGCATAGAAGCCGTAA+AGG + chr3.1:77939435-77939454 None:intergenic 40.0%
TAGTGACAGAAGCTACACTT+TGG - chr3.1:77935123-77935142 MS.gene06302:intron 40.0%
TATCGAACCTGCAACAACTA+AGG + chr3.1:77934805-77934824 None:intergenic 40.0%
TCCATAACCAACATAACCTG+GGG + chr3.1:77939187-77939206 None:intergenic 40.0%
TCTCCATAACCAACATAACC+TGG + chr3.1:77939189-77939208 None:intergenic 40.0%
TCTGACAACCAATTAAACGG+AGG + chr3.1:77934987-77935006 None:intergenic 40.0%
TCTGTACATGTCACATCGAT+TGG - chr3.1:77939047-77939066 MS.gene06302:intron 40.0%
TGAGTCAAGTATGAGTTCAC+TGG + chr3.1:77938510-77938529 None:intergenic 40.0%
TGCAATCTGTTGCTGAAATG+AGG - chr3.1:77937161-77937180 MS.gene06302:intron 40.0%
TGCTTAAACCTTCACTTGGA+AGG - chr3.1:77936714-77936733 MS.gene06302:intron 40.0%
TGTAGGACTATTAATGGCTG+GGG - chr3.1:77936432-77936451 MS.gene06302:CDS 40.0%
TGTTCAGTCCACGCTTAAAA+TGG - chr3.1:77938358-77938377 MS.gene06302:intron 40.0%
TTCAGGAAACGGACATGATA+AGG - chr3.1:77939106-77939125 MS.gene06302:intron 40.0%
TTTGGACTCTGGATTATAGC+CGG - chr3.1:77935212-77935231 MS.gene06302:intron 40.0%
! AAAAGGATAAGGCTTTGGCA+CGG - chr3.1:77937674-77937693 MS.gene06302:intron 40.0%
! ATATCATCGTGGCTTGTGAT+TGG - chr3.1:77935672-77935691 MS.gene06302:intron 40.0%
! ATTGCTTGCTGAAAAGTGCA+AGG - chr3.1:77940286-77940305 MS.gene06302:CDS 40.0%
! GGTTATGTTGGTTATGGAGA+AGG - chr3.1:77939189-77939208 MS.gene06302:intron 40.0%
! GTGGTGATGACTTCAAATGT+GGG - chr3.1:77939607-77939626 MS.gene06302:intron 40.0%
! TATGTTGGTTATGGAGAAGG+GGG - chr3.1:77939192-77939211 MS.gene06302:intron 40.0%
! TGCCATTACCATTTTAAGCG+TGG + chr3.1:77938369-77938388 None:intergenic 40.0%
! TGGTGATGACTTCAAATGTG+GGG - chr3.1:77939608-77939627 MS.gene06302:intron 40.0%
! TTCGGCTGAGATTGGTAATT+GGG - chr3.1:77935188-77935207 MS.gene06302:intron 40.0%
! TTGCATACTCTCTAAAAGCC+CGG - chr3.1:77938310-77938329 MS.gene06302:intron 40.0%
! TTTCGGCTGAGATTGGTAAT+TGG - chr3.1:77935187-77935206 MS.gene06302:intron 40.0%
!! ATTGGGAGGGATTTGTTGTT+TGG - chr3.1:77937373-77937392 MS.gene06302:intron 40.0%
!! CGCTTAAAATGGTAATGGCA+TGG - chr3.1:77938369-77938388 MS.gene06302:intron 40.0%
!! TCTATATCACAAAGGCGTTC+TGG - chr3.1:77935894-77935913 MS.gene06302:CDS 40.0%
!! TCTTTGGCTGCATGCTATTT+TGG - chr3.1:77938919-77938938 MS.gene06302:intron 40.0%
!!! ATTTTTTGGGCTACCCGAAA+AGG - chr3.1:77935448-77935467 MS.gene06302:CDS 40.0%
!!! CATGTAACCTTTTGGTTCCA+TGG + chr3.1:77937115-77937134 None:intergenic 40.0%
AAAAGAGAGAGGAGAGCTAG+AGG - chr3.1:77936456-77936475 MS.gene06302:CDS 45.0%
AAAAGGCTGCTGTCATATCC+TGG - chr3.1:77935465-77935484 MS.gene06302:CDS 45.0%
AAAATCAATTCCTCGGGGCA+TGG + chr3.1:77940150-77940169 None:intergenic 45.0%
AAAGTTGCTATGGGTCTACC+GGG + chr3.1:77938853-77938872 None:intergenic 45.0%
AACTGGAATTCCTGACCAGA+GGG + chr3.1:77938695-77938714 None:intergenic 45.0%
AAGGACCTTGTCTGTAAGGA+AGG - chr3.1:77940188-77940207 MS.gene06302:CDS 45.0%
AAGGCACGTGCAATTACAGA+AGG + chr3.1:77936324-77936343 None:intergenic 45.0%
AAGTTATTAGGATCTCCCCC+AGG - chr3.1:77939168-77939187 MS.gene06302:intron 45.0%
ACCAAAACTCAACGAACCTG+TGG + chr3.1:77939808-77939827 None:intergenic 45.0%
AGAGGTCTAGCACCATATGT+TGG + chr3.1:77940221-77940240 None:intergenic 45.0%
AGCCAGGTTATGTGTCCAAT+GGG - chr3.1:77935859-77935878 MS.gene06302:CDS 45.0%
AGGCACGTGCAATTACAGAA+GGG + chr3.1:77936323-77936342 None:intergenic 45.0%
AGTCAAGGACCTTGTCTGTA+AGG - chr3.1:77940184-77940203 MS.gene06302:CDS 45.0%
CAAAAAGAGCTGGCTAGAGA+TGG - chr3.1:77935831-77935850 MS.gene06302:CDS 45.0%
CAACAGGATAGATGAAGTGG+TGG - chr3.1:77939762-77939781 MS.gene06302:intron 45.0%
CAAGCAATGCTTCAGCCAAT+GGG + chr3.1:77940274-77940293 None:intergenic 45.0%
CATAGCCTTCCTTACAGACA+AGG + chr3.1:77940196-77940215 None:intergenic 45.0%
CATTTCTTACTCTCAGGTGC+AGG - chr3.1:77938442-77938461 MS.gene06302:CDS 45.0%
CCATAACCAACATAACCTGG+GGG + chr3.1:77939186-77939205 None:intergenic 45.0%
CGACAGTTACAAAGGAGAAG+AGG + chr3.1:77937777-77937796 None:intergenic 45.0%
CGATAAGTTTCGGCTGAGAT+TGG - chr3.1:77935180-77935199 MS.gene06302:intron 45.0%
CGATCAAAGTGAAACCAACG+CGG + chr3.1:77935101-77935120 None:intergenic 45.0%
CTCGCCGATGATATTCACTT+TGG - chr3.1:77939851-77939870 MS.gene06302:intron 45.0%
CTTGTTCAATCAGGGACAAC+CGG - chr3.1:77936653-77936672 MS.gene06302:intron 45.0%
CTTTGACCAGAGTATGCAAG+GGG + chr3.1:77935403-77935422 None:intergenic 45.0%
GAAGGCTATGACCCAACATA+TGG - chr3.1:77940206-77940225 MS.gene06302:CDS 45.0%
GACAAAACGTGTCATGTCCT+TGG - chr3.1:77936408-77936427 MS.gene06302:CDS 45.0%
GACAGCTAAAACGGAACGAA+GGG - chr3.1:77938019-77938038 MS.gene06302:CDS 45.0%
GACTTTGACCAGAGTATGCA+AGG + chr3.1:77935405-77935424 None:intergenic 45.0%
GAGGTCTAGCACCATATGTT+GGG + chr3.1:77940220-77940239 None:intergenic 45.0%
GATGCAATACACTGCACAGA+CGG + chr3.1:77937622-77937641 None:intergenic 45.0%
GCAGCTCATGCAAAGAACAT+CGG + chr3.1:77938406-77938425 None:intergenic 45.0%
GCCGATGATATTCACTTTGG+AGG - chr3.1:77939854-77939873 MS.gene06302:intron 45.0%
GCTCAACAGGATAGATGAAG+TGG - chr3.1:77939759-77939778 MS.gene06302:intron 45.0%
GGATCTGCCGCTAAAACAAA+AGG - chr3.1:77935921-77935940 MS.gene06302:CDS 45.0%
GGGAAAACAGCTATTGCAGA+GGG - chr3.1:77936198-77936217 MS.gene06302:CDS 45.0%
GGGCTGATTGATCCAGTTAT+TGG - chr3.1:77936090-77936109 MS.gene06302:intron 45.0%
GGTAATTGGGATTTGGACTC+TGG - chr3.1:77935201-77935220 MS.gene06302:intron 45.0%
TATCGGTCCTTAGTTGTTGC+AGG - chr3.1:77934795-77934814 MS.gene06302:intron 45.0%
TCAACTTCTCGGCCAATAAC+TGG + chr3.1:77936105-77936124 None:intergenic 45.0%
TCTATCCTGTTGAGCAGTTC+TGG + chr3.1:77939754-77939773 None:intergenic 45.0%
TCTGTGAAGAGATCTCGAGT+CGG - chr3.1:77938817-77938836 MS.gene06302:CDS 45.0%
TCTTGCATATCTCCACTCCA+TGG - chr3.1:77937095-77937114 MS.gene06302:intron 45.0%
TGCTCTATCACAATTCTGCG+TGG - chr3.1:77936044-77936063 MS.gene06302:intron 45.0%
TGGGAAAACAGCTATTGCAG+AGG - chr3.1:77936197-77936216 MS.gene06302:CDS 45.0%
TGTTAATGCCTCTCTGCTGT+TGG - chr3.1:77937326-77937345 MS.gene06302:intron 45.0%
TTACTATTCTGTGGCCCAAC+TGG - chr3.1:77938871-77938890 MS.gene06302:CDS 45.0%
TTAGCATCACGTGTCAACAC+CGG - chr3.1:77934762-77934781 MS.gene06302:intron 45.0%
TTATGGTGCATCTGGCATTG+AGG - chr3.1:77938481-77938500 MS.gene06302:CDS 45.0%
TTGTTCAATCAGGGACAACC+GGG - chr3.1:77936654-77936673 MS.gene06302:intron 45.0%
TTTACAATGGCTCTCCTGAG+AGG + chr3.1:77940239-77940258 None:intergenic 45.0%
TTTGACCAGAGTATGCAAGG+GGG + chr3.1:77935402-77935421 None:intergenic 45.0%
! AACGAACCTGTGGCTTTTCA+AGG + chr3.1:77939798-77939817 None:intergenic 45.0%
! ACAGAAGCTACACTTTGGAG+AGG - chr3.1:77935128-77935147 MS.gene06302:intron 45.0%
! ACGAACCTGTGGCTTTTCAA+GGG + chr3.1:77939797-77939816 None:intergenic 45.0%
! CGACCTGTTCCGTTTTCTTT+TGG - chr3.1:77934436-77934455 MS.gene06302:CDS 45.0%
! CTTGCTGAAAAGTGCAAGGA+AGG - chr3.1:77940290-77940309 MS.gene06302:CDS 45.0%
! GATATGACAGCAGCCTTTTC+GGG + chr3.1:77935464-77935483 None:intergenic 45.0%
! GATCTGGAGCTATATCATCG+TGG - chr3.1:77935661-77935680 MS.gene06302:intron 45.0%
! GGATATGACAGCAGCCTTTT+CGG + chr3.1:77935465-77935484 None:intergenic 45.0%
! GGTGGTGATGACTTCAAATG+TGG - chr3.1:77939606-77939625 MS.gene06302:intron 45.0%
! TGAGGTGTCTGAATCAGTCA+AGG - chr3.1:77940169-77940188 MS.gene06302:CDS 45.0%
!! AGATTTGTTGTGTCCCCCAT+TGG + chr3.1:77935877-77935896 None:intergenic 45.0%
!!! AACCTTTTGGTTCCATGGAG+TGG + chr3.1:77937110-77937129 None:intergenic 45.0%
!!! CCGTTTTAGCTGTCGCTATA+AGG + chr3.1:77938013-77938032 None:intergenic 45.0%
!!! GGCTGCATGCTATTTTGGAT+CGG - chr3.1:77938924-77938943 MS.gene06302:intron 45.0%
!! AATAAAAAAATAAAAATAAG+CGG - chr3.1:77939989-77940008 MS.gene06302:intron 5.0%
!! TTTAAGAAAATTAATTTATT+TGG - chr3.1:77934869-77934888 MS.gene06302:intron 5.0%
!!! ATTTTTTTTGTAATTTTAAT+TGG - chr3.1:77937355-77937374 MS.gene06302:intron 5.0%
!!! TTTTTTTTGTAATTTTAATT+GGG - chr3.1:77937356-77937375 MS.gene06302:intron 5.0%
AACAGCTATTGCAGAGGGAC+TGG - chr3.1:77936203-77936222 MS.gene06302:CDS 50.0%
AACTGACCCCTTCCAAGTGA+AGG + chr3.1:77936725-77936744 None:intergenic 50.0%
AAGGAGAAGAGGGAGTCACT+TGG + chr3.1:77937766-77937785 None:intergenic 50.0%
AAGGGTCGACACAACTCCAT+AGG - chr3.1:77939646-77939665 MS.gene06302:intron 50.0%
AATCAGCCCAACACTTGCAC+GGG + chr3.1:77936079-77936098 None:intergenic 50.0%
ACAACCGGGAGGGGAAATAA+GGG - chr3.1:77936668-77936687 MS.gene06302:intron 50.0%
ACACCGGTCACGTGAAGTAT+CGG - chr3.1:77934778-77934797 MS.gene06302:intron 50.0%
ACGTGTGATTGGACAAGAGG+AGG - chr3.1:77938774-77938793 MS.gene06302:CDS 50.0%
ACTTGGAAGGGGTCAGTTTC+AGG - chr3.1:77936727-77936746 MS.gene06302:intron 50.0%
CAATCAGCCCAACACTTGCA+CGG + chr3.1:77936080-77936099 None:intergenic 50.0%
CACTGCAGCCTCCGTTTAAT+TGG - chr3.1:77934976-77934995 MS.gene06302:CDS 50.0%
CCAATTCTTCTGGGTGAAGC+TGG - chr3.1:77936171-77936190 MS.gene06302:CDS 50.0%
CCAGCTTCACCCAGAAGAAT+TGG + chr3.1:77936174-77936193 None:intergenic 50.0%
CCAGGTTATGTGTCCAATGG+GGG - chr3.1:77935861-77935880 MS.gene06302:CDS 50.0%
CGACAGCTAAAACGGAACGA+AGG - chr3.1:77938018-77938037 MS.gene06302:CDS 50.0%
CGTGTCATGTCCTTGGATGT+AGG - chr3.1:77936415-77936434 MS.gene06302:CDS 50.0%
CTCCACTCCATGGAACCAAA+AGG - chr3.1:77937105-77937124 MS.gene06302:intron 50.0%
CTCGGCTCATCAATCCAAAC+AGG + chr3.1:77937709-77937728 None:intergenic 50.0%
GAACTGGAATTCCTGACCAG+AGG + chr3.1:77938696-77938715 None:intergenic 50.0%
GAGCCAGGTTATGTGTCCAA+TGG - chr3.1:77935858-77935877 MS.gene06302:CDS 50.0%
GCAAGCAATGCTTCAGCCAA+TGG + chr3.1:77940275-77940294 None:intergenic 50.0%
GCCAGGTTATGTGTCCAATG+GGG - chr3.1:77935860-77935879 MS.gene06302:CDS 50.0%
GGAACGTGTGATTGGACAAG+AGG - chr3.1:77938771-77938790 MS.gene06302:CDS 50.0%
TAGCAACAGTTGCTTCCCTC+TGG - chr3.1:77938677-77938696 MS.gene06302:intron 50.0%
TATGTGTGGCACACGACAAG+AGG - chr3.1:77936561-77936580 MS.gene06302:CDS 50.0%
TCATCCCCTTGAAAAGCCAC+AGG - chr3.1:77939789-77939808 MS.gene06302:intron 50.0%
TGCTGCTGCAAGACGTGAAA+AGG - chr3.1:77940123-77940142 MS.gene06302:CDS 50.0%
TTCGTCCAGAACTGCTCAAC+AGG - chr3.1:77939746-77939765 MS.gene06302:intron 50.0%
TTCTGGGTGAAGCTGGAGTT+GGG - chr3.1:77936178-77936197 MS.gene06302:CDS 50.0%
TTGGATTGATGAGCCGAGTG+AGG - chr3.1:77937711-77937730 MS.gene06302:intron 50.0%
! AGAACCCTTATTTCCCCTCC+CGG + chr3.1:77936675-77936694 None:intergenic 50.0%
! AGGGGTCAGTTTCAGGTGAT+TGG - chr3.1:77936734-77936753 MS.gene06302:intron 50.0%
! CAGTTTTCCCAACGCCAGTT+GGG + chr3.1:77938888-77938907 None:intergenic 50.0%
! CATATGGTGCTAGACCTCTC+AGG - chr3.1:77940222-77940241 MS.gene06302:CDS 50.0%
! CCCCCAGGTTATGTTGGTTA+TGG - chr3.1:77939183-77939202 MS.gene06302:intron 50.0%
! CTACACTTTGGAGAGGCCAT+TGG - chr3.1:77935135-77935154 MS.gene06302:intron 50.0%
! GCATCGGCAAACCTGAGAAT+CGG + chr3.1:77939337-77939356 None:intergenic 50.0%
! GCCACAGGTTCGTTGAGTTT+TGG - chr3.1:77939804-77939823 MS.gene06302:intron 50.0%
! GGGTCTAGTGCCATTGCTAA+GGG - chr3.1:77939628-77939647 MS.gene06302:intron 50.0%
! GTTGTGTCGACCCTTAGCAA+TGG + chr3.1:77939641-77939660 None:intergenic 50.0%
! TCAGTTTTCCCAACGCCAGT+TGG + chr3.1:77938889-77938908 None:intergenic 50.0%
!! CATCGGTTTACACTCCTTGC+AGG - chr3.1:77936596-77936615 MS.gene06302:intron 50.0%
!! CGAACCTGTGGCTTTTCAAG+GGG + chr3.1:77939796-77939815 None:intergenic 50.0%
!! GCCCCGAGGAATTGATTTTG+AGG - chr3.1:77940151-77940170 MS.gene06302:CDS 50.0%
!! TGGCCATCTTACCGATTCTC+AGG - chr3.1:77939323-77939342 MS.gene06302:intron 50.0%
ACAGTTGCTTCCCTCTGGTC+AGG - chr3.1:77938682-77938701 MS.gene06302:intron 55.0%
AGAGATCTCGAGTCGGCCTT+CGG - chr3.1:77938824-77938843 MS.gene06302:CDS 55.0%
ATGGCTGGGGCAAAAGAGAG+AGG - chr3.1:77936445-77936464 MS.gene06302:CDS 55.0%
CACGGCGGTTTCAACCTGTT+TGG - chr3.1:77937692-77937711 MS.gene06302:intron 55.0%
CCACAGCTGCCAACTGATCT+GGG + chr3.1:77935797-77935816 None:intergenic 55.0%
CCCCCATTGGACACATAACC+TGG + chr3.1:77935864-77935883 None:intergenic 55.0%
CGGGTCAAACCCAGATCAGT+TGG - chr3.1:77935785-77935804 MS.gene06302:CDS 55.0%
CGTGATGCTAACGCGCCATT+TGG + chr3.1:77934753-77934772 None:intergenic 55.0%
CTTCTGGGTGAAGCTGGAGT+TGG - chr3.1:77936177-77936196 MS.gene06302:CDS 55.0%
GAACTCCCCCTTGCATACTC+TGG - chr3.1:77935394-77935413 MS.gene06302:CDS 55.0%
GACAACCGGGAGGGGAAATA+AGG - chr3.1:77936667-77936686 MS.gene06302:intron 55.0%
GCTAGAGATGGTAGAGAGCC+AGG - chr3.1:77935843-77935862 MS.gene06302:CDS 55.0%
GGACCGATACTTCACGTGAC+CGG + chr3.1:77934784-77934803 None:intergenic 55.0%
GGATCTCCCCCAGGTTATGT+TGG - chr3.1:77939177-77939196 MS.gene06302:intron 55.0%
GGGAGGGGAAATAAGGGTTC+TGG - chr3.1:77936674-77936693 MS.gene06302:intron 55.0%
TCAATCAGGGACAACCGGGA+GGG - chr3.1:77936658-77936677 MS.gene06302:intron 55.0%
TCACTGCCCGTGCAAGTGTT+GGG - chr3.1:77936070-77936089 MS.gene06302:intron 55.0%
TCAGCAGTGAGCTGCTGAAC+TGG + chr3.1:77938712-77938731 None:intergenic 55.0%
TTCAATCAGGGACAACCGGG+AGG - chr3.1:77936657-77936676 MS.gene06302:intron 55.0%
! AGGATAAGGCTTTGGCACGG+CGG - chr3.1:77937677-77937696 MS.gene06302:intron 55.0%
! GGGGTCTAGTGCCATTGCTA+AGG - chr3.1:77939627-77939646 MS.gene06302:intron 55.0%
!! TCACAAAGGCGTTCTGGTGC+AGG - chr3.1:77935900-77935919 MS.gene06302:CDS 55.0%
AGGCGTGTCTGTTTCCGCGT+TGG - chr3.1:77935084-77935103 MS.gene06302:CDS 60.0%
CAATCAGGGACAACCGGGAG+GGG - chr3.1:77936659-77936678 MS.gene06302:intron 60.0%
CCCAGATCAGTTGGCAGCTG+TGG - chr3.1:77935794-77935813 MS.gene06302:CDS 60.0%
CTCACTGCCCGTGCAAGTGT+TGG - chr3.1:77936069-77936088 MS.gene06302:intron 60.0%
GAGATCTCGAGTCGGCCTTC+GGG - chr3.1:77938825-77938844 MS.gene06302:CDS 60.0%
GCCACAGCTGCCAACTGATC+TGG + chr3.1:77935798-77935817 None:intergenic 60.0%
GTGAAAAGGACCATGCCCCG+AGG - chr3.1:77940137-77940156 MS.gene06302:CDS 60.0%
TCTGTGGCCCAACTGGCGTT+GGG - chr3.1:77938878-77938897 MS.gene06302:CDS 60.0%
TTCTGTGGCCCAACTGGCGT+TGG - chr3.1:77938877-77938896 MS.gene06302:CDS 60.0%
TGGGTCTACCGGGATCCCGA+AGG + chr3.1:77938843-77938862 None:intergenic 65.0%
CGAGTCGGCCTTCGGGATCC+CGG - chr3.1:77938832-77938851 MS.gene06302:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 77934277 77940409 77934277 ID=MS.gene06302
chr3.1 mRNA 77934277 77940409 77934277 ID=MS.gene06302.t1;Parent=MS.gene06302
chr3.1 exon 77940099 77940409 77940099 ID=MS.gene06302.t1.exon1;Parent=MS.gene06302.t1
chr3.1 CDS 77940099 77940409 77940099 ID=cds.MS.gene06302.t1;Parent=MS.gene06302.t1
chr3.1 exon 77938771 77938904 77938771 ID=MS.gene06302.t1.exon2;Parent=MS.gene06302.t1
chr3.1 CDS 77938771 77938904 77938771 ID=cds.MS.gene06302.t1;Parent=MS.gene06302.t1
chr3.1 exon 77938420 77938652 77938420 ID=MS.gene06302.t1.exon3;Parent=MS.gene06302.t1
chr3.1 CDS 77938420 77938652 77938420 ID=cds.MS.gene06302.t1;Parent=MS.gene06302.t1
chr3.1 exon 77938169 77938277 77938169 ID=MS.gene06302.t1.exon4;Parent=MS.gene06302.t1
chr3.1 CDS 77938169 77938277 77938169 ID=cds.MS.gene06302.t1;Parent=MS.gene06302.t1
chr3.1 exon 77937938 77938068 77937938 ID=MS.gene06302.t1.exon5;Parent=MS.gene06302.t1
chr3.1 CDS 77937938 77938068 77937938 ID=cds.MS.gene06302.t1;Parent=MS.gene06302.t1
chr3.1 exon 77936954 77937055 77936954 ID=MS.gene06302.t1.exon6;Parent=MS.gene06302.t1
chr3.1 CDS 77936954 77937055 77936954 ID=cds.MS.gene06302.t1;Parent=MS.gene06302.t1
chr3.1 exon 77936307 77936588 77936307 ID=MS.gene06302.t1.exon7;Parent=MS.gene06302.t1
chr3.1 CDS 77936307 77936588 77936307 ID=cds.MS.gene06302.t1;Parent=MS.gene06302.t1
chr3.1 exon 77936128 77936228 77936128 ID=MS.gene06302.t1.exon8;Parent=MS.gene06302.t1
chr3.1 CDS 77936128 77936228 77936128 ID=cds.MS.gene06302.t1;Parent=MS.gene06302.t1
chr3.1 exon 77935741 77936035 77935741 ID=MS.gene06302.t1.exon9;Parent=MS.gene06302.t1
chr3.1 CDS 77935741 77936035 77935741 ID=cds.MS.gene06302.t1;Parent=MS.gene06302.t1
chr3.1 exon 77935342 77935575 77935342 ID=MS.gene06302.t1.exon10;Parent=MS.gene06302.t1
chr3.1 CDS 77935342 77935575 77935342 ID=cds.MS.gene06302.t1;Parent=MS.gene06302.t1
chr3.1 exon 77934876 77935109 77934876 ID=MS.gene06302.t1.exon11;Parent=MS.gene06302.t1
chr3.1 CDS 77934876 77935109 77934876 ID=cds.MS.gene06302.t1;Parent=MS.gene06302.t1
chr3.1 exon 77934277 77934582 77934277 ID=MS.gene06302.t1.exon12;Parent=MS.gene06302.t1
chr3.1 CDS 77934277 77934582 77934277 ID=cds.MS.gene06302.t1;Parent=MS.gene06302.t1
Gene Sequence

>MS.gene06302

ATGCTTGGTCTCATAGCTGAAGCTGAAGAGACAAATCGTTCTCAAAACGGTTTTCTTGATTCTGGTGTAGTCACTCTTGAGAAAGCTCGTGATGCTGTTCCTCATCTCAATGATTCAACTAACTACGTTGATGATAATGGAGTGTATGTGTATGAAGATCGACCTGTTCCGTTTTCTTTTGGTACTAAACGTGTTTTTGAAGCTGCTGTTGAGTATTCAAGATCTCTGAACCATAATTTTGTTGATCCTGAACATATTTTCGTTGCTTTGATGAAAGTTGATGATGGAAGTTCTGCTAGAATTCTTTATAGGTATCAAATCTCTTTCTTTATTCAATACTTATAATACATTTCCATTTGGTATTTGGAGAGTATTGTTGTTTTTGGCTCATTTCTATAATTATATGCATATGCATATGCATTTTAGTGTATACTTTCTTGTTTTGAATTATTTCCTAAAGAAACTTATTTGAACCAAATGGCGCGTTAGCATCACGTGTCAACACCGGTCACGTGAAGTATCGGTCCTTAGTTGTTGCAGGTTCGATACTTGACATCCAATCAATGATAACCAAGAAACAAATGTTGGCTATTTTAAGAAAATTAATTTATTTGGTAATGAACTTTTTAAGAATAATGCTGGATGTCAAGAAACTTGCTTCGTAAATCTGTCACGATGTCAGTTATATAAAGTATTACACACTGCAGCCTCCGTTTAATTGGTTGTCAGACTATTTGTGAAGCTTTAATGACTAAATCAGTCGTGCTAAATTGCATCGCTGTTATGACAATTTAAATTCAACTTTAAAGGCGTGTCTGTTTCCGCGTTGGTTTCACTTTGATCGCATAGTGACAGAAGCTACACTTTGGAGAGGCCATTGGCTGTGTTTCCAAATATGTACTTCGATAAGTTTCGGCTGAGATTGGTAATTGGGATTTGGACTCTGGATTATAGCCGGACAATATGACATAGTTCATGGCACATAGATGATCTTCAGTTGTTGCTCTAGACTTAATACATCAACTGTTTTGTGCTTAAAAACTAAATTGAAGATTAATGAGTTATCCAAAATACCATTTGTCTTACGATTTTAGATGATCGATTTTGACTGAAGTTCGAACTCCCCCTTGCATACTCTGGTCAAAGTCAATCTCAATTTGTCGGTGAAACAATTTTTTGGGCTACCCGAAAAGGCTGCTGTCATATCCTGGTTTATAAGTCCTTTGAGTTGCATAACTAGTTTGAAAAATATTCTTTGGGGTAAAATTTTAAGGAAATTCAGTTTTATCAAGTTTTTGTAGATGCATTAGCTTTTTAAAGAGTGTGGAAATTTGCTTAATAGCAAATGCCAATATTTGTTTTTCTTTTGTTTTGTGGCAATAATGATCTGGAGCTATATCATCGTGGCTTGTGATTGGACAATTGACTGTGTGCAAGATCTATCATTAAATTATGTGTGTAGCTATAATTTTCCATTAATGTTGCTAGTATGCAAATGATTTCAGACTCGGGTCAAACCCAGATCAGTTGGCAGCTGTGGCATATTCAAGACTACAAAAAGAGCTGGCTAGAGATGGTAGAGAGCCAGGTTATGTGTCCAATGGGGGACACAACAAATCTATATCACAAAGGCGTTCTGGTGCAGGATCTGCCGCTAAAACAAAAGGCAAGAAAATATAAAGTTTGTTGTTTATGATTTGATTTTGATGGTTGAAGGCAGAGATAAGTTTTTCTCATATTCATTCTCTGGTTGTCAGATAAAAAGAGTGCTCTATCACAATTCTGCGTGGATCTCACTGCCCGTGCAAGTGTTGGGCTGATTGATCCAGTTATTGGCCGAGAAGTTGAAGTTCAAAGAATTATTCAAATACTATGCCGAAAGACAAAAAGCAATCCAATTCTTCTGGGTGAAGCTGGAGTTGGGAAAACAGCTATTGCAGAGGGACTGGCAATTCTTATTTCTCAGGCAGAAGTTGCTCCTTTTCTATTGGTGTGTCTATCAACAAATGATTAATGTTTCTAAAGTTTTTCTTTTCTTGTGTACCCTTCTGTAATTGCACGTGCCTTAATTAATATGTTTCTATCTACTTGGAGTGCATTGTAATTTCACTTTCTAACTTGTGTCTACACAGACAAAACGTGTCATGTCCTTGGATGTAGGACTATTAATGGCTGGGGCAAAAGAGAGAGGAGAGCTAGAGGACCGCGTTACAAAATTAATAAAAGATATAATAGAGTCAGGTGAATACATTTTAGCAAAAATATTATAAGAGTTGTGTTAATATATGTGTGGCACACGACAAGAGGATTGTTTTAGCTCATCGGTTTACACTCCTTGCAGGTGATGTCATTCTTTTCATTGACGAAGTTCACACACTTGTTCAATCAGGGACAACCGGGAGGGGAAATAAGGGTTCTGGCTTTGACATTGCTAATTTGCTTAAACCTTCACTTGGAAGGGGTCAGTTTCAGGTGATTGGTTGCCCTGTAATCTCATCTGCTAGTTTCCTTTGTTCCAAGTGATACTTGAATATTTATGTATTTCAATTTGAAGCCATCAAATAAACAATTGCTAGTAACGTATAAGATTAAGGTTAGAGGAAAAAATATATGATAACCAGTTACAGTTACTACACTTCTGTACCCAACATTTTTCAAAGTAACTGTACTAAACAAGATTAGCATTTAACATCTGGAAAGTAGGAAGGTTGAGATTATTCTAGAAGTTGTCTTTATGAAATACTGGGAGGCTATAGTTCTTGTTAATAGACTCACTGCTTAGATGGAAGAGATATGAGTGAGTGTTAACTGGTAAATATCTTGCATATCTCCACTCCATGGAACCAAAAGGTTACATGTACTAGAAAAATTATTTTGCAAACATTGCAATCTGTTGCTGAAATGAGGGCAAATTTGTATGTTCGGTGTTCGTGAGTCTCTTTTCAATTTCTATAAAGCTAGTTCCATATATTTTCATGTTTAAGGCTGTGAATACTGGAATCAGTTATATTCAACAACGCTAAGGCATGATATTCAATCGTATTTTTTCTGTTAATGCCTCTCTGCTGTTGGAATTTTATTTTTTTTGTAATTTTAATTGGGAGGGATTTGTTGTTTGGAGAGAGTAGTTTTGGACTTTGAATTCTCTGGCTGACACAACTGTGTAAGTCATAATTGTTCTTTCCTCTGATGAATTTTTCTTGAATAGTTGGTTCAATTATATTATGCAGTCGGAATGTTCTTACAGTGATCATTTTTGTATAAGATGGGATCATCATTTTTACTTGAGCATTGTAATAAAATATGCACACACACCATAACTTGTCACTATGAATAACATTTCCGTCTGTGCAGTGTATTGCATCTACCACTATTGATGAATACAGGCTTCATTTTGAAAAGGATAAGGCTTTGGCACGGCGGTTTCAACCTGTTTGGATTGATGAGCCGAGTGAGGTTGCACTTTATATTCATGTCTATACTGTTCCAAGTGACTCCCTCTTCTCCTTTGTAACTGTCGCTTTTGTAGAAAAAAATTGTTTCTATTTATTTGTACGTTTTTAAAGTTCAATGAGACATTAACTATTGTTTCGCAATAACGCCCTTAATTATTTATTGCAAAGAGAGAAATAGATGGAATGAGATGTAATAAATAGTTAAGATTGTTATAGAAAAAAGGTATAATTTTATCAAATGTACCAAGTTTATTGGTTTGTTTGGTACGTGTAAATAACCTTATAGCGACAGCTAAAACGGAACGAAGGGAGTACCATTTTAATCATAATTTGATCTCTTAATGAACTGTGTGTTGTTGTGTATAGGATGATGCAATGAAGATACTTATGGGTGTACGTGAGAAATATGAAACACACCACAAGTGCAGATATACAGAAGATGCCATAAAGGCTGCAGTTCATTTGTCAGCAAGATACATAGTTGATAGGTATCTACCTGATAAAGCTATTGACCTCATTGATGAAGCAGGAAGTAAAGCTTCTATTGAAGCCTTTAAGATGAAAAAAGAACACGATTATTGCATACTCTCTAAAAGCCCGGATGATTATTGGAGAGAAATTAGAACTGTTCAGTCCACGCTTAAAATGGTAATGGCATGGCTTGCTGTATTCCGATGTTCTTTGCATGAGCTGCTTACAGTTTAAGTTGACATTTCTTACTCTCAGGTGCAGGAGAGCATGCTTAAATATTATGGTGCATCTGGCATTGAGGATACCAGTGAACTCATACTTGACTCATATTTAACTTCTGCAGCATTTGATAATGAGTATGTTAGTGATACCCAAAGCAGAGTTCTTTCTTTTGTGCATATCTATCTAGATTTGGTTTTTGAGTGGCTGACATGTTATTGTGTTTTAGGTGTATAGAAGTTAGGCCTGATCATATAGCAACAGTTGCTTCCCTCTGGTCAGGAATTCCAGTTCAGCAGCTCACTGCTGATGAAAGAAGTCTTCTGTTAGATCTGGATAATAAACTAAGGGAACGTGTGATTGGACAAGAGGAGGCTGTTTCTGCCATTTCTAGATCTGTGAAGAGATCTCGAGTCGGCCTTCGGGATCCCGGTAGACCCATAGCAACTTTACTATTCTGTGGCCCAACTGGCGTTGGGAAAACTGAACTAGCAAAGTCTTTGGCTGCATGCTATTTTGGATCGGTAAGTATTCACACAAGGTGTGTTTTTTTGGCATTAATAATGAGGACATTCTTTATTTTTGTTTTTCCTCTTTTCGATGTTCTGAAATGATAAATTTGCAATCTGTACATGTCACATCGATTGGTTCGTCTGTTTATATTTTTGCCTTTCATACTATCATTTCAGGAAACGGACATGATAAGGTTAGACATGAGTGAATATATGGAACGCCATTCAGTGAGCAAGTTATTAGGATCTCCCCCAGGTTATGTTGGTTATGGAGAAGGGGGCATTTTAACCGAAGCTATTAGAAGAAAACCATTTACTGTGGTTTTGTTTGATGAAATAGAAAAAGCTCATCCAGATATATTTAACATTCTTCTTCAATTAATGGAAGATGGCCATCTTACCGATTCTCAGGTTTGCCGATGCTGATGTGAATCTTAATTTACTAGGACTTCAATAACCCTTTAAACATGAAACTTTCTCTTGGCATTTCTATATCTTCCTTTACGGCTTCTATGCAAGTAAAAACGATCACTTGTGTGATTCATAAAAACAAGCACTTGTAGTTGTATCAATAGAATATGAAATTAACACTACTAGTGCCCTAAATTTTTATGTTTATTGTTTGAAAAACTGGTTCTAATAGGGTCGAAGAGTTTCATTTAAAAATGCATTGGTGGTGATGACTTCAAATGTGGGGTCTAGTGCCATTGCTAAGGGTCGACACAACTCCATAGGTTTCTTCATTTCAGATGACAAACCAACATCATATAATGGATTGAAATCGATGGTAATTGAAGAACTGAGGACATATTTTCGTCCAGAACTGCTCAACAGGATAGATGAAGTGGTGGTGTTTCATCCCCTTGAAAAGCCACAGGTTCGTTGAGTTTTGGTTCTGATTTAGTTTAATGATTTAGCTCGCCGATGATATTCACTTTGGAGGCTCTTACACAATATTCTATTACTATTTATTTATTATTTAGTCATTTTTGTTTGGCAATAATATGATTTTCAGAAACCGTTTTAAGCAGTTAAATTTAAATACTGGTGTTTTTAATAAAAAAATAAAAATAAGCGGTGCCAAGTTTTTTTATGTGTATGCTTTTTTTTTATTGATGTTATTTGTCAAAAAAAGAAAATATTGATGTTATTGCTATACTTTTATCACAGTTGCTCCAAATATTTGATTTGCTGCTGCAAGACGTGAAAAGGACCATGCCCCGAGGAATTGATTTTGAGGTGTCTGAATCAGTCAAGGACCTTGTCTGTAAGGAAGGCTATGACCCAACATATGGTGCTAGACCTCTCAGGAGAGCCATTGTAAACTTAATTGCAAACCCATTGGCTGAAGCATTGCTTGCTGAAAAGTGCAAGGAAGGTGACACTGTCTTCATTGATTTGGATGCCAATGGTAACACCCTTGTTATAAATCAGCTTGATCAGACAGTCAACTTATCCGACACAAGTCACCCTTGA
Protein sequence

>MS.gene06302.t1

MLGLIAEAEETNRSQNGFLDSGVVTLEKARDAVPHLNDSTNYVDDNGVYVYEDRPVPFSFGTKRVFEAAVEYSRSLNHNFVDPEHIFVALMKVDDGSSARILYRLGSNPDQLAAVAYSRLQKELARDGREPGYVSNGGHNKSISQRRSDKKSALSQFCVDLTARASVGLIDPVIGREVEVQRIIQILCRKTKSNPILLGEAGVGKTAIAEGLAILISQAEVAPFLLTKRVMSLDVGLLMAGAKERGELEDRVTKLIKDIIESGDVILFIDEVHTLVQSGTTGRGNKGSGFDIANLLKPSLGRGQFQCIASTTIDEYRLHFEKDKALARRFQPVWIDEPSEDDAMKILMGVREKYETHHKCRYTEDAIKAAVHLSARYIVDRYLPDKAIDLIDEAGSKASIEAFKMKKEHDYCILSKSPDDYWREIRTVQSTLKMVQESMLKYYGASGIEDTSELILDSYLTSAAFDNECIEVRPDHIATVASLWSGIPVQQLTADERSLLLDLDNKLRERVIGQEEAVSAISRSVKRSRVGLRDPGRPIATLLFCGPTGVGKTELAKSLAACYFGSETDMIRLDMSEYMERHSVSKLLGSPPGYVGYGEGGILTEAIRRKPFTVVLFDEIEKAHPDIFNILLQLMEDGHLTDSQGRRVSFKNALVVMTSNVGSSAIAKGRHNSIGFFISDDKPTSYNGLKSMVIEELRTYFRPELLNRIDEVVVFHPLEKPQLLQIFDLLLQDVKRTMPRGIDFEVSESVKDLVCKEGYDPTYGARPLRRAIVNLIANPLAEALLAEKCKEGDTVFIDLDANGNTLVINQLDQTVNLSDTSHP