AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene030500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene030500.t1 MTR_8g100040 99.676 926 3 0 1 926 1 926 0.0 1866
MS.gene030500.t1 MTR_3g102830 96.117 927 35 1 1 926 1 927 0.0 1806
MS.gene030500.t1 MTR_3g498725 90.173 926 87 2 1 926 1 922 0.0 1659
MS.gene030500.t1 MTR_3g461000 50.605 826 331 13 95 911 1 758 0.0 773
MS.gene030500.t1 MTR_3g098310 46.234 863 409 13 95 911 100 953 0.0 746
MS.gene030500.t1 MTR_6g013660 45.495 888 388 16 89 902 71 936 0.0 732
MS.gene030500.t1 MTR_7g012820 44.926 877 390 15 97 902 86 940 0.0 723
MS.gene030500.t1 MTR_7g012820 44.926 877 390 15 97 902 15 869 0.0 721
MS.gene030500.t1 MTR_3g106160 42.165 970 443 14 5 902 26 949 0.0 719
MS.gene030500.t1 MTR_4g109450 41.326 905 433 15 97 925 4 886 0.0 658
MS.gene030500.t1 MTR_4g109450 42.686 834 389 14 97 863 4 815 0.0 632
MS.gene030500.t1 MTR_7g028970 42.159 880 417 17 98 909 5 860 0.0 630
MS.gene030500.t1 MTR_3g098310 45.402 696 328 10 95 745 100 788 0.0 583
MS.gene030500.t1 MTR_6g048860 89.873 158 12 1 231 388 112 265 1.56e-87 284
MS.gene030500.t1 MTR_2g099075 40.606 330 179 3 581 909 143 456 1.04e-75 256
MS.gene030500.t1 MTR_2g006950 36.962 395 216 7 507 898 11 375 2.56e-71 247
MS.gene030500.t1 MTR_2g006950 33.803 213 109 5 701 909 371 555 7.12e-27 117
MS.gene030500.t1 MTR_1g076440 84.762 105 16 0 128 232 7 111 7.75e-50 179
MS.gene030500.t1 MTR_1g076440 65.891 129 33 2 669 797 158 275 2.03e-42 157
MS.gene030500.t1 MTR_1g076440 91.892 37 1 1 890 926 276 310 4.99e-12 68.6
MS.gene030500.t1 MTR_1614s0010 37.313 201 107 4 676 874 1 184 3.24e-29 115
MS.gene030500.t1 MTR_5g098360 41.000 100 58 1 591 690 69 167 1.47e-19 87.4
MS.gene030500.t1 MTR_5g011550 25.373 201 144 4 29 224 15 214 1.42e-12 68.9
MS.gene030500.t1 MTR_7g096480 29.661 118 50 1 578 695 11 95 1.90e-11 65.5
MS.gene030500.t1 MTR_4g129230 26.946 167 99 3 595 761 657 800 8.99e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene030500.t1 AT5G50920 85.791 929 123 4 2 926 5 928 0.0 1553
MS.gene030500.t1 AT3G48870 84.146 902 134 2 31 926 22 920 0.0 1488
MS.gene030500.t1 AT3G48870 84.146 902 134 2 31 926 53 951 0.0 1484
MS.gene030500.t1 AT3G48870 84.146 902 134 2 31 926 53 951 0.0 1484
MS.gene030500.t1 AT3G48870 84.146 902 134 2 31 926 53 951 0.0 1484
MS.gene030500.t1 AT5G51070 48.951 858 382 13 94 906 78 924 0.0 772
MS.gene030500.t1 AT5G15450 45.132 873 393 14 97 902 80 933 0.0 716
MS.gene030500.t1 AT2G25140 44.469 895 401 16 90 909 77 950 0.0 716
MS.gene030500.t1 AT1G74310 42.325 886 426 14 97 919 4 867 0.0 666
MS.gene030500.t1 AT1G74310 43.133 830 388 13 97 863 4 812 0.0 640
MS.gene030500.t1 AT4G14670 43.662 568 241 10 190 699 77 623 2.55e-143 440
MS.gene030500.t1 AT3G45450 61.096 365 95 7 95 457 1 320 4.49e-124 379
MS.gene030500.t1 AT4G30350 30.994 171 105 3 591 761 563 720 1.45e-13 75.5
MS.gene030500.t1 AT4G12060 31.111 135 90 2 91 222 86 220 6.26e-11 64.3
MS.gene030500.t1 AT4G25370 28.906 128 88 2 98 222 85 212 9.83e-11 63.5

Find 254 sgRNAs with CRISPR-Local

Find 359 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCAGTGACAGAGAGATTT+AGG 0.125238 4.1:-6907084 MS.gene030500:CDS
TTCAGTATTTGTATGGTTTC+AGG 0.145881 4.1:+6908981 None:intergenic
TTCTTTCCCTCTATGGTTTC+GGG 0.165534 4.1:+6909761 None:intergenic
CAGATTCTATTGGGTCTTAT+TGG 0.178181 4.1:-6910916 MS.gene030500:CDS
AGCACGTGTTCTTGAAAATT+TGG 0.179133 4.1:-6910326 MS.gene030500:CDS
CGGATCTGAGCACTTGCTTT+TGG 0.186791 4.1:-6910377 MS.gene030500:CDS
GTCAAAATCACAGGGAAAAT+TGG 0.189560 4.1:-6909936 MS.gene030500:intron
AAAATAATCCTTGTCTTATT+GGG 0.195129 4.1:-6909850 MS.gene030500:CDS
CTCTGCTAGCTTGGTCAAAT+TGG 0.202101 4.1:+6910051 None:intergenic
ACATTACACAAACGCATTAT+TGG 0.214703 4.1:-6907802 MS.gene030500:CDS
ATTACGTACTTTGAATTCTT+TGG 0.223172 4.1:-6911136 MS.gene030500:CDS
CTTCTTTCCCTCTATGGTTT+CGG 0.225647 4.1:+6909760 None:intergenic
CACTGAGAGTTCAATCTCTT+TGG 0.226936 4.1:+6907099 None:intergenic
CTGTTAGCCTCCCATCTTCT+AGG 0.244391 4.1:+6907416 None:intergenic
ACCAACCTTCTTTCCCTCTA+TGG 0.244485 4.1:+6909754 None:intergenic
TCAAGACCTCTTGCCTCTTC+AGG 0.272725 4.1:+6908387 None:intergenic
AGGAATCATGTCGAGGGTTT+TGG 0.273755 4.1:-6911298 None:intergenic
GATGAAGTGCACACTCTAAT+TGG 0.276610 4.1:-6909420 MS.gene030500:CDS
ACGAGCCATAATGCGACTTT+TGG 0.309688 4.1:-6907008 MS.gene030500:CDS
GTTGGCTCTGGCACTTTAAC+AGG 0.313503 4.1:+6909008 None:intergenic
AAGCTGGCGATTGGCCTGTT+AGG 0.315733 4.1:+6907715 None:intergenic
AGCTGTCGCATCAATATATT+AGG 0.322138 4.1:-6908887 MS.gene030500:intron
CGCATTATGGCTCGTCTTAG+AGG 0.322921 4.1:+6907016 None:intergenic
TCTTGATATGAGTGAATTCA+TGG 0.325696 4.1:-6907602 MS.gene030500:CDS
TCAGGAGGAGGCAAGGCGGC+TGG 0.337825 4.1:-6910962 MS.gene030500:CDS
TGGAACTGAACAGATTCTAT+TGG 0.339561 4.1:-6910926 MS.gene030500:CDS
GTCCTCCAAAAGTCGCATTA+TGG 0.346892 4.1:+6907003 None:intergenic
GTCGAGGTAGAGAAGATAAT+TGG 0.347679 4.1:-6910829 MS.gene030500:CDS
GCACGTGTTCTTGAAAATTT+GGG 0.360653 4.1:-6910325 MS.gene030500:CDS
TTTCAGGCAACTCACTAAAC+TGG 0.370563 4.1:-6907176 MS.gene030500:CDS
GTGAGGGTGCTGATAGTGTT+GGG 0.370689 4.1:-6910132 MS.gene030500:CDS
CTCAGTGACAGAGAGATTTA+GGG 0.374480 4.1:-6907083 MS.gene030500:CDS
TGAACGTGTCACTCAAATCT+TGG 0.375274 4.1:-6909885 MS.gene030500:CDS
TGGAGGTGAACCAATGAGTT+TGG 0.375955 4.1:+6907564 None:intergenic
CTCTTGGCACGTGGGGTAAA+CGG 0.377703 4.1:+6910775 None:intergenic
AGAGCATCTGGCAATGAATC+TGG 0.383859 4.1:+6906872 None:intergenic
TTTCCAGGTCACAATTATAT+CGG 0.383974 4.1:-6910397 MS.gene030500:intron
GGAACTGAACAGATTCTATT+GGG 0.395625 4.1:-6910925 MS.gene030500:CDS
CCTTGTCTTATTGGGGAACC+TGG 0.397535 4.1:-6909842 MS.gene030500:CDS
TCCCGAGTAACTAGACAGTC+TGG 0.401943 4.1:+6911158 None:intergenic
AAGTCCTTTCAGTATTTGTA+TGG 0.403240 4.1:+6908974 None:intergenic
AAGGTTATAATCCTAGTTAT+GGG 0.408036 4.1:-6907045 MS.gene030500:CDS
CCACAACTCTAGATGAATAT+AGG 0.408234 4.1:-6909073 MS.gene030500:CDS
AAGATAATTGGAAGGGGAAG+TGG 0.413810 4.1:-6910817 MS.gene030500:CDS
AAAATACTTATGCAGTGTAT+AGG 0.417632 4.1:-6909098 MS.gene030500:intron
GAAGGTTATAATCCTAGTTA+TGG 0.419366 4.1:-6907046 MS.gene030500:CDS
GTTGGGGCTACCGTTGGCTC+TGG 0.423794 4.1:-6910115 MS.gene030500:CDS
GGTCTTATTGGTGAAGGAAC+TGG 0.424307 4.1:-6910904 MS.gene030500:CDS
TGGGAGGCTAACAGATAGTA+AGG 0.426292 4.1:-6907407 MS.gene030500:CDS
TTAGGCCAGAGTTCTTGAAT+AGG 0.427859 4.1:-6907216 MS.gene030500:CDS
ATGCCAACTTTGGAGGAGTA+TGG 0.429557 4.1:-6910076 MS.gene030500:CDS
GAGAGTCTTGGAACTCTCAT+TGG 0.431062 4.1:-6910755 MS.gene030500:CDS
TACAACATATTGTTGCCTCT+TGG 0.434175 4.1:-6907888 MS.gene030500:CDS
CATATTGTTGCCTCTTGGAC+TGG 0.442718 4.1:-6907883 MS.gene030500:CDS
GAGGTCTTGAAAAGGAAGTT+AGG 0.443885 4.1:-6908374 MS.gene030500:CDS
AAGCAGTAGAAGCCATTAGC+AGG 0.446141 4.1:-6907771 MS.gene030500:CDS
GCATTGGCCTCATACTACTT+TGG 0.446338 4.1:-6907646 MS.gene030500:CDS
GCCTGGGTGCGAATATTAGT+TGG 0.447285 4.1:+6910295 None:intergenic
CAGGAGGAGGCAAGGCGGCT+GGG 0.447536 4.1:-6910961 MS.gene030500:CDS
TCAACCGAGACTTTGTCAAC+AGG 0.449665 4.1:+6907856 None:intergenic
TGGAATCGCCTCTCCAAAGC+TGG 0.451335 4.1:+6909032 None:intergenic
ATCAAATCTATAGCTTTGTC+AGG 0.451675 4.1:+6908538 None:intergenic
GGTGAGGGTGCTGATAGTGT+TGG 0.456497 4.1:-6910133 MS.gene030500:CDS
AGTTACCTCCTCTGCTAGCT+TGG 0.457680 4.1:+6910042 None:intergenic
TAACAATAAGATGCCAACTT+TGG 0.458624 4.1:-6910086 MS.gene030500:CDS
TTGGACTTAAGAACCCTAAC+AGG 0.460747 4.1:-6907729 MS.gene030500:CDS
GTGCATGTTGAAGTCGGACT+CGG 0.460857 4.1:+6908500 None:intergenic
AACAAGGCAGAGAGTGAGGC+AGG 0.463527 4.1:-6907943 MS.gene030500:CDS
AGCATCATGTTGAAGACATC+AGG 0.464962 4.1:+6907445 None:intergenic
AGCTGGCGATTGGCCTGTTA+GGG 0.465113 4.1:+6907716 None:intergenic
TCGACGGATAGCCCTGCTAA+TGG 0.465463 4.1:+6907759 None:intergenic
AGGAACTGGTATTGCGGCTA+AGG 0.466745 4.1:-6910890 MS.gene030500:CDS
AAACTCATTGGTTCACCTCC+AGG 0.469560 4.1:-6907562 MS.gene030500:CDS
AGGAGCTGAAACAATACTTT+AGG 0.470372 4.1:-6907234 MS.gene030500:CDS
GAGAGTGAGGCAGGAGATGT+AGG 0.476103 4.1:-6907934 MS.gene030500:CDS
GATAGCGGATATAATGTTGA+AGG 0.477705 4.1:-6907143 MS.gene030500:CDS
GTCAACTGACTGAGGCAGTT+CGG 0.478584 4.1:-6907516 MS.gene030500:CDS
TGGCTGAAAAGATGCTTGCT+AGG 0.481331 4.1:-6906976 MS.gene030500:CDS
ATGCTTCAAATCCTAGAAGA+TGG 0.482486 4.1:-6907427 MS.gene030500:CDS
AGAGCTAAGGGATAAAGAAA+TGG 0.482796 4.1:-6908013 MS.gene030500:CDS
AGAGGCCTGGCCCCATAACT+AGG 0.483439 4.1:+6907034 None:intergenic
CTTGCTCAACGGATTGCAAA+TGG 0.484269 4.1:-6909791 MS.gene030500:CDS
TGTGGCTGCCTACCCACAAC+AGG 0.484594 4.1:+6909911 None:intergenic
GAACGTGTCACTCAAATCTT+GGG 0.488197 4.1:-6909884 MS.gene030500:CDS
ACCCAGACTGTCTAGTTACT+CGG 0.490173 4.1:-6911160 MS.gene030500:CDS
CACACAGTCTCCAAACTCAT+TGG 0.490778 4.1:-6907574 MS.gene030500:CDS
ACTCATATCAAGACGAATCA+TGG 0.492017 4.1:+6907612 None:intergenic
CAAAGTAATTATGTTGGCTC+AGG 0.492161 4.1:-6910980 MS.gene030500:CDS
ACTCACTAAACTGGAGGTTA+AGG 0.492407 4.1:-6907167 MS.gene030500:CDS
TATGGCTCGTCTTAGAGGCC+TGG 0.495631 4.1:+6907021 None:intergenic
GTCTGAATTGGCTAAGGCAT+TGG 0.499413 4.1:-6907662 MS.gene030500:CDS
GCACCTTAGAATGAAAATCT+TGG 0.499615 4.1:+6911094 None:intergenic
TGAGTGACACGTTCAATTTG+TGG 0.499806 4.1:+6909893 None:intergenic
CTACAAGTAGACCCATGTCT+AGG 0.500151 4.1:+6909532 None:intergenic
ATAGATTTGATTGATGAAGC+TGG 0.500246 4.1:-6908526 MS.gene030500:CDS
TCAAAGAGTACAACCGTGTA+GGG 0.502030 4.1:+6907487 None:intergenic
CCTATATTCATCTAGAGTTG+TGG 0.502316 4.1:+6909073 None:intergenic
GGAAGTTAGGCAGATAGTAA+AGG 0.502653 4.1:-6908361 MS.gene030500:CDS
TCTAAGGTGCTCACTCAGAT+TGG 0.504328 4.1:-6911081 MS.gene030500:CDS
GGGAAAATTGGATCCTGTTG+TGG 0.505719 4.1:-6909924 MS.gene030500:CDS
AGAGGGCGACTCTGTTATAG+TGG 0.506335 4.1:-6906945 MS.gene030500:CDS
TGGTGTGGGGAAGTCTGAAT+TGG 0.506886 4.1:-6907674 MS.gene030500:CDS
GTTTCAGGAACAGTTGGCTC+TGG 0.507634 4.1:+6908996 None:intergenic
GGAAAATTGGATCCTGTTGT+GGG 0.508304 4.1:-6909923 MS.gene030500:CDS
AATGTCCCTGGTCTAGTGGC+TGG 0.508918 4.1:-6911264 MS.gene030500:CDS
ATCTGATCGTCTTCTCAAGA+TGG 0.509066 4.1:-6907830 MS.gene030500:CDS
CAATAAGATGCCAACTTTGG+AGG 0.509184 4.1:-6910083 MS.gene030500:CDS
CTTCGACCAGCCACTAGACC+AGG 0.509991 4.1:+6911258 None:intergenic
GGAAGCAGTGTGATCGAGAA+AGG 0.510531 4.1:-6907334 MS.gene030500:CDS
TGAGAGTTCCAAGACTCTCT+TGG 0.510742 4.1:+6910759 None:intergenic
ATACTTGCAGTTACCTGAAG+AGG 0.512391 4.1:-6908400 MS.gene030500:intron
TCAGTATAACCAACATATCC+TGG 0.513853 4.1:+6907544 None:intergenic
CTGAATAGGCTGGAGAGCTA+AGG 0.514789 4.1:-6908026 MS.gene030500:intron
CTTATAATGACATCAAATGT+TGG 0.515383 4.1:-6907355 MS.gene030500:CDS
AGTAATTATGTTGGCTCAGG+AGG 0.515651 4.1:-6910977 MS.gene030500:CDS
GCTCTGGCACTTTAACAGGT+TGG 0.519765 4.1:+6909012 None:intergenic
TTCAGATCCAAAGTAGTATG+AGG 0.520690 4.1:+6907639 None:intergenic
GGTTCACCTCCAGGATATGT+TGG 0.521392 4.1:-6907553 MS.gene030500:CDS
CTATTGGGTCTTATTGGTGA+AGG 0.521471 4.1:-6910910 MS.gene030500:CDS
GTGCCATACTCCTCCAAAGT+TGG 0.521933 4.1:+6910073 None:intergenic
TTGGAGGAAGCTCGTCAACT+TGG 0.522024 4.1:-6910736 MS.gene030500:intron
AAAGTATTGTTTCAGCTCCT+CGG 0.523545 4.1:+6907237 None:intergenic
CTCTGTAAAACGCTCAAACA+TGG 0.524422 4.1:+6911011 None:intergenic
GAAAAGATGAAGCTGGCGAT+TGG 0.524522 4.1:+6907706 None:intergenic
GATTGGTACTAATCGAGCTA+AGG 0.525728 4.1:-6911064 MS.gene030500:CDS
AATTATGTTGGCTCAGGAGG+AGG 0.526333 4.1:-6910974 MS.gene030500:CDS
TGTATGGTTTCAGGAACAGT+TGG 0.528654 4.1:+6908990 None:intergenic
GCGCAGTCGATTAATGTCCC+TGG 0.531046 4.1:-6911276 MS.gene030500:CDS
ATGGCTGTCTTTCCGACACC+AGG 0.532374 4.1:+6909824 None:intergenic
CTGGTCTAGTGGCTGGTCGA+AGG 0.533789 4.1:-6911257 MS.gene030500:CDS
AAATAATCCTTGTCTTATTG+GGG 0.534007 4.1:-6909849 MS.gene030500:CDS
GAGAAAGGAGGCCGTCGCAT+AGG 0.534709 4.1:-6907319 MS.gene030500:CDS
TCTTGCTAGAGGTGAACTAC+AGG 0.537146 4.1:-6909346 MS.gene030500:intron
TCCAAGACTCTCTTGGCACG+TGG 0.537851 4.1:+6910766 None:intergenic
GGTAGAGAAGATAATTGGAA+GGG 0.540976 4.1:-6910824 MS.gene030500:CDS
ATTGTGCTCAACGGTAGTAC+TGG 0.541363 4.1:-6906899 MS.gene030500:CDS
GTTATTCGCATGGTTGGTGA+GGG 0.544259 4.1:-6910148 MS.gene030500:CDS
ATAATCCTAGTTATGGGGCC+AGG 0.544978 4.1:-6907039 MS.gene030500:CDS
AGGTAGAGAAGATAATTGGA+AGG 0.545059 4.1:-6910825 MS.gene030500:CDS
GTAGAGAAGATAATTGGAAG+GGG 0.545295 4.1:-6910823 MS.gene030500:CDS
ATCTTTCTTCAAATTCTCCA+CGG 0.545588 4.1:+6909496 None:intergenic
CAAGAGCCTCATCAGTATAA+CGG 0.549394 4.1:+6908922 None:intergenic
TTGCTGAAGGCCTTGCTCAA+CGG 0.549532 4.1:-6909802 MS.gene030500:CDS
AGAGGCAAGAGGTCTTGAAA+AGG 0.550450 4.1:-6908382 MS.gene030500:CDS
TGAATAGGCTGGAGAGCTAA+GGG 0.551002 4.1:-6908025 MS.gene030500:intron
GTGCACACTCTAATTGGAGC+AGG 0.551279 4.1:-6909414 MS.gene030500:CDS
TTAGAATGAAAATCTTGGCC+AGG 0.551842 4.1:+6911099 None:intergenic
AATCGAGCTAAGGGTGGTAG+AGG 0.552487 4.1:-6911054 MS.gene030500:CDS
CGAAACCATAGAGGGAAAGA+AGG 0.554723 4.1:-6909759 MS.gene030500:intron
GATAGTGTTGGGGCTACCGT+TGG 0.556248 4.1:-6910121 MS.gene030500:CDS
GGCTGAAAAGATGCTTGCTA+GGG 0.556352 4.1:-6906975 MS.gene030500:CDS
TGCATGTTGAAGTCGGACTC+GGG 0.557579 4.1:+6908501 None:intergenic
AGCTATCAAAGTAATTATGT+TGG 0.558080 4.1:-6910986 MS.gene030500:CDS
GGTTATTCGCATGGTTGGTG+AGG 0.559144 4.1:-6910149 MS.gene030500:CDS
TCGCAACCAAGAGTTTGAAA+AGG 0.559598 4.1:-6908322 MS.gene030500:intron
TACAAGTAGACCCATGTCTA+GGG 0.560184 4.1:+6909533 None:intergenic
TGCTTCAAATCCTAGAAGAT+GGG 0.561107 4.1:-6907426 MS.gene030500:CDS
AGTCTTGGAACTCTCATTGG+AGG 0.561170 4.1:-6910752 MS.gene030500:CDS
TCAAGCCTATTCAAGAACTC+TGG 0.561431 4.1:+6907211 None:intergenic
CCCACGTGCCAAGAGAGTCT+TGG 0.563576 4.1:-6910767 MS.gene030500:CDS
GATGAACAAGGCAGAGAGTG+AGG 0.564477 4.1:-6907947 MS.gene030500:CDS
CCCAGACTGTCTAGTTACTC+GGG 0.564773 4.1:-6911159 MS.gene030500:CDS
GATTAATGTCCCTGGTCTAG+TGG 0.568714 4.1:-6911268 MS.gene030500:CDS
TGACCTTGACTATGATGAGA+AGG 0.570760 4.1:-6907293 MS.gene030500:CDS
ATTGGAGCAGGAGCAGCTGA+AGG 0.572423 4.1:-6909402 MS.gene030500:CDS
TTGGAGCAGGAGCAGCTGAA+GGG 0.573404 4.1:-6909401 MS.gene030500:CDS
GGTCTTCTTAGAGAGGGTGA+AGG 0.574148 4.1:-6910355 MS.gene030500:CDS
CATTTGCAATCCGTTGAGCA+AGG 0.575860 4.1:+6909792 None:intergenic
GAACAGGTTATTCGCATGGT+TGG 0.577586 4.1:-6910154 MS.gene030500:intron
GACATGGGTCTACTTGTAGC+GGG 0.577854 4.1:-6909528 MS.gene030500:CDS
AGCTGAAGGGGCAATTGATG+CGG 0.578062 4.1:-6909388 MS.gene030500:CDS
AGAGAGATTTAGGGAGAGAG+TGG 0.578335 4.1:-6907074 MS.gene030500:CDS
TTGAGCAAGGCCTTCAGCAA+TGG 0.579061 4.1:+6909805 None:intergenic
CAGGCAACTCACTAAACTGG+AGG 0.580885 4.1:-6907173 MS.gene030500:CDS
ATGGGAACAGGTTATTCGCA+TGG 0.580936 4.1:-6910158 MS.gene030500:intron
ATTGGTACTAATCGAGCTAA+GGG 0.582672 4.1:-6911063 MS.gene030500:CDS
TTTCTGGCCCTACTGGTGTG+GGG 0.583111 4.1:-6907687 MS.gene030500:CDS
AGTTCACCTCTAGCAAGAGC+TGG 0.583470 4.1:+6909351 None:intergenic
TGGAGCAGGAGCAGCTGAAG+GGG 0.584707 4.1:-6909400 MS.gene030500:CDS
CATCAGTATAACGGAGCTTG+TGG 0.587701 4.1:+6908931 None:intergenic
GCTATCCGTCGAGCTCGTGT+TGG 0.588676 4.1:-6907748 MS.gene030500:CDS
TTGGATTCAATGTTTAGACC+TGG 0.588863 4.1:-6911117 MS.gene030500:CDS
CTTATTGGGGAACCTGGTGT+CGG 0.589543 4.1:-6909836 MS.gene030500:CDS
TTATAACAGAATCAAGAGCT+TGG 0.591045 4.1:-6907263 MS.gene030500:CDS
GCTTGCTAGGGAGATTAAAG+AGG 0.591894 4.1:-6906963 MS.gene030500:CDS
GGATATGTTGGTTATACTGA+GGG 0.591922 4.1:-6907541 MS.gene030500:CDS
AGGGCCAGAAAAGATGAAGC+TGG 0.593390 4.1:+6907699 None:intergenic
GGAAAGACAGCCATTGCTGA+AGG 0.593506 4.1:-6909815 MS.gene030500:CDS
TGATGTCCCCGAAACCATAG+AGG 0.595369 4.1:-6909768 MS.gene030500:CDS
TCAGACTTCCCCACACCAGT+AGG 0.597091 4.1:+6907679 None:intergenic
TCTTAGAGAGGGTGAAGGTG+TGG 0.599604 4.1:-6910350 MS.gene030500:CDS
AGTTCGGCGTCGTCCCTACA+CGG 0.600953 4.1:-6907500 MS.gene030500:CDS
TGAGGGTGCTGATAGTGTTG+GGG 0.601686 4.1:-6910131 MS.gene030500:CDS
GGGGAAGTCTGAATTGGCTA+AGG 0.601878 4.1:-6907668 MS.gene030500:CDS
TAAGTCCAACACGAGCTCGA+CGG 0.602184 4.1:+6907743 None:intergenic
TCTTTCCCTCTATGGTTTCG+GGG 0.604706 4.1:+6909762 None:intergenic
CAATTCAGGAATCATGTCGA+GGG 0.605004 4.1:-6911304 None:intergenic
CCCGAGTAACTAGACAGTCT+GGG 0.606554 4.1:+6911159 None:intergenic
TATCCCTGTTGACAAAGTCT+CGG 0.606924 4.1:-6907860 MS.gene030500:CDS
TGTTGGCTCAGGAGGAGGCA+AGG 0.607258 4.1:-6910969 MS.gene030500:CDS
TTTGACCAAGCTAGCAGAGG+AGG 0.607369 4.1:-6910047 MS.gene030500:intron
CAGACTTCCCCACACCAGTA+GGG 0.610250 4.1:+6907680 None:intergenic
AGCGGATATAATGTTGAAGG+AGG 0.610347 4.1:-6907140 MS.gene030500:CDS
CATGTTGAAGACATCAGGAT+GGG 0.610516 4.1:+6907450 None:intergenic
GAAACCATACAAATACTGAA+AGG 0.611115 4.1:-6908978 MS.gene030500:CDS
CCTAAAAGATGCACGTGTCG+AGG 0.614327 4.1:-6910845 MS.gene030500:CDS
AGTCCGACTTCAACATGCAC+AGG 0.614688 4.1:-6908497 MS.gene030500:intron
TGGTGAAGGAACTGGTATTG+CGG 0.615599 4.1:-6910896 MS.gene030500:CDS
CAGTTACCTGAAGAGGCAAG+AGG 0.619646 4.1:-6908393 MS.gene030500:CDS
GTTACTACTTCCAGAGCCAA+CGG 0.622846 4.1:+6910105 None:intergenic
CCAAGACTCTCTTGGCACGT+GGG 0.623311 4.1:+6910767 None:intergenic
TTGAAGCCAGCTCTTGCTAG+AGG 0.624182 4.1:-6909357 MS.gene030500:CDS
CAAGACTCTCTTGGCACGTG+GGG 0.624750 4.1:+6910768 None:intergenic
AATTGGATCCTGTTGTGGGT+AGG 0.625477 4.1:-6909919 MS.gene030500:CDS
TCATGTTGAAGACATCAGGA+TGG 0.628699 4.1:+6907449 None:intergenic
AAGGAGCAGCTAGATCAAGA+AGG 0.632838 4.1:-6911218 MS.gene030500:CDS
TGTCCTTCTCATCATAGTCA+AGG 0.633612 4.1:+6907290 None:intergenic
CAAGCTCCGTTATACTGATG+AGG 0.634549 4.1:-6908928 MS.gene030500:CDS
ATCAAAGAGTACAACCGTGT+AGG 0.635792 4.1:+6907486 None:intergenic
AATCAAGAGCTTGGTGACCG+AGG 0.635925 4.1:-6907254 MS.gene030500:CDS
AGGGAGAGAGTGGTCGACGA+AGG 0.636473 4.1:-6907064 MS.gene030500:CDS
AGGATATGTTGGTTATACTG+AGG 0.636582 4.1:-6907542 MS.gene030500:CDS
CAAGGTCAAATCCTATGCGA+CGG 0.639546 4.1:+6907308 None:intergenic
CAACCGAGACTTTGTCAACA+GGG 0.642126 4.1:+6907857 None:intergenic
ACTGGAGGTTAAGGAGATAG+CGG 0.642477 4.1:-6907158 MS.gene030500:CDS
ACAATTCAGGAATCATGTCG+AGG 0.643511 4.1:-6911305 None:intergenic
CTTGCTAGGGAGATTAAAGA+GGG 0.645642 4.1:-6906962 MS.gene030500:CDS
TTCGACCAGCCACTAGACCA+GGG 0.645722 4.1:+6911259 None:intergenic
ATACCTGTGCATGTTGAAGT+CGG 0.645864 4.1:+6908494 None:intergenic
AGCAGTAGAAGCCATTAGCA+GGG 0.646108 4.1:-6907770 MS.gene030500:CDS
TCTGGGTGCAGCAGTTCGTG+TGG 0.646472 4.1:+6911176 None:intergenic
GTAGGTTATAACCCTAGACA+TGG 0.646798 4.1:-6909544 MS.gene030500:intron
AGACATGGGTCTACTTGTAG+CGG 0.647126 4.1:-6909529 MS.gene030500:CDS
AGGTTATAATCCTAGTTATG+GGG 0.648482 4.1:-6907044 MS.gene030500:CDS
GATGTCCCCGAAACCATAGA+GGG 0.650692 4.1:-6909767 MS.gene030500:CDS
TATGTTGGTTATACTGAGGG+TGG 0.650997 4.1:-6907538 MS.gene030500:CDS
CCAGGTTCCCCAATAAGACA+AGG 0.651573 4.1:+6909842 None:intergenic
ATATGAGTGAATTCATGGAA+AGG 0.652142 4.1:-6907597 MS.gene030500:CDS
GGGAGGCTAACAGATAGTAA+GGG 0.655267 4.1:-6907406 MS.gene030500:CDS
AACAGGGATACCAGTCCAAG+AGG 0.658998 4.1:+6907873 None:intergenic
ATAGTGGATGCTGATTCTGA+TGG 0.662089 4.1:-6906929 MS.gene030500:CDS
AGGCATGTCAATAACAACAA+AGG 0.662987 4.1:-6911237 MS.gene030500:CDS
TTCAAATCCTAGAAGATGGG+AGG 0.665767 4.1:-6907423 MS.gene030500:CDS
TCCAACTAATATTCGCACCC+AGG 0.666203 4.1:-6910296 MS.gene030500:intron
CAATTTGACCAAGCTAGCAG+AGG 0.667069 4.1:-6910050 MS.gene030500:CDS
AGATAGTAAGGGAAGAACTG+TGG 0.671130 4.1:-6907395 MS.gene030500:CDS
TGAGGGTGGTCAACTGACTG+AGG 0.676897 4.1:-6907524 MS.gene030500:CDS
AGCAGTGTGATCGAGAAAGG+AGG 0.677611 4.1:-6907331 MS.gene030500:CDS
GGTACTAATCGAGCTAAGGG+TGG 0.687277 4.1:-6911060 MS.gene030500:CDS
TAGGTTATAACCCTAGACAT+GGG 0.687828 4.1:-6909543 MS.gene030500:CDS
GGAAACGTGATTGTGCTCAA+CGG 0.722695 4.1:-6906908 MS.gene030500:CDS
GTATAACCAACATATCCTGG+AGG 0.727417 4.1:+6907547 None:intergenic
TGGCTCAGGAGGAGGCAAGG+CGG 0.734449 4.1:-6910966 MS.gene030500:CDS
GTAGCGGGAACTAAATACCG+TGG 0.739992 4.1:-6909513 MS.gene030500:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATCAAAAACAATTTA+TGG + chr4.1:6908444-6908463 None:intergenic 10.0%
!! TAAAATCAAAAACAATTTAT+GGG + chr4.1:6908443-6908462 None:intergenic 10.0%
!! TCATAAATTAAAATTGAAAA+CGG + chr4.1:6909326-6909345 None:intergenic 10.0%
!! ATTTGGATATATATAATTGA+AGG + chr4.1:6910059-6910078 None:intergenic 15.0%
!! CATAAATTAAAATTGAAAAC+GGG + chr4.1:6909325-6909344 None:intergenic 15.0%
!!! AATTGTTTTTGATTTTATTC+AGG - chr4.1:6908446-6908465 MS.gene030500:intron 15.0%
!!! ATTGTTTTACAACATTATTT+TGG - chr4.1:6909445-6909464 MS.gene030500:CDS 15.0%
!!! ATTGTTTTTGATTTTATTCA+GGG - chr4.1:6908447-6908466 MS.gene030500:intron 15.0%
!!! GTTCTTTTGTTTATTTTATT+TGG - chr4.1:6907661-6907680 MS.gene030500:CDS 15.0%
!!! TAAATTCTTAATGATCATTT+TGG - chr4.1:6908997-6909016 MS.gene030500:CDS 15.0%
!!! TTCAATTTTAATTTATGATG+TGG - chr4.1:6909328-6909347 MS.gene030500:intron 15.0%
!! AAAAATAATCCTTGTCTTAT+TGG - chr4.1:6908302-6908321 MS.gene030500:intron 20.0%
!! AAAATATAATGTAATCTCAC+TGG + chr4.1:6909933-6909952 None:intergenic 20.0%
!! AAATAAACAAAAGAACAGAA+AGG + chr4.1:6907657-6907676 None:intergenic 20.0%
!! AATGTTGTAAAACAATTCAA+AGG + chr4.1:6909441-6909460 None:intergenic 20.0%
!! AGAAAGATTGAAAAAACTAA+TGG - chr4.1:6908672-6908691 MS.gene030500:intron 20.0%
!!! AAAATAATCCTTGTCTTATT+GGG - chr4.1:6908303-6908322 MS.gene030500:intron 20.0%
!!! AATAAGACAAGGATTATTTT+TGG + chr4.1:6908303-6908322 None:intergenic 20.0%
!!! AGAGAATTTTTTTATAGTTC+TGG - chr4.1:6909354-6909373 MS.gene030500:CDS 20.0%
!!! TTGTTTTTGATTTTATTCAG+GGG - chr4.1:6908448-6908467 MS.gene030500:intron 20.0%
! AAAATACTTATGCAGTGTAT+AGG - chr4.1:6909055-6909074 MS.gene030500:CDS 25.0%
! AAATTCCAGATGATTAACTT+CGG + chr4.1:6909409-6909428 None:intergenic 25.0%
! AAGATTGAAAAAACTAATGG+AGG - chr4.1:6908675-6908694 MS.gene030500:intron 25.0%
! AAGGTTATAATCCTAGTTAT+GGG - chr4.1:6911108-6911127 MS.gene030500:CDS 25.0%
! AGCACTTATAGAAAAAAACA+AGG - chr4.1:6910182-6910201 MS.gene030500:intron 25.0%
! AGCTATCAAAGTAATTATGT+TGG - chr4.1:6907167-6907186 MS.gene030500:CDS 25.0%
! ATTACGTACTTTGAATTCTT+TGG - chr4.1:6907017-6907036 MS.gene030500:CDS 25.0%
! ATTTATTACCCAGAATGTAA+AGG + chr4.1:6910083-6910102 None:intergenic 25.0%
! CTGATTATAATTCTTAGATG+TGG - chr4.1:6908532-6908551 MS.gene030500:CDS 25.0%
! CTGGTATTACATGTTTAAAT+GGG - chr4.1:6909373-6909392 MS.gene030500:CDS 25.0%
! CTTATAATGACATCAAATGT+TGG - chr4.1:6910798-6910817 MS.gene030500:CDS 25.0%
! GTTGAAATTTATCCATGAAT+TGG - chr4.1:6907610-6907629 MS.gene030500:CDS 25.0%
! TCTGGTATTACATGTTTAAA+TGG - chr4.1:6909372-6909391 MS.gene030500:CDS 25.0%
! TGATACCTTAATTTCTGAAT+AGG - chr4.1:6910113-6910132 MS.gene030500:CDS 25.0%
!! AAATAATCCTTGTCTTATTG+GGG - chr4.1:6908304-6908323 MS.gene030500:intron 25.0%
!! TTCTTTTGACATCTCAAAAA+TGG - chr4.1:6908837-6908856 MS.gene030500:intron 25.0%
!! TTGATGAAATGATTGTTTTC+AGG - chr4.1:6910961-6910980 MS.gene030500:CDS 25.0%
!!! ATGTGGAATTTTAGTACTTT+CGG - chr4.1:6908549-6908568 MS.gene030500:CDS 25.0%
!!! TGTTTTTGATTTTATTCAGG+GGG - chr4.1:6908449-6908468 MS.gene030500:intron 25.0%
AAAAAACAAGGAGATGAACA+AGG - chr4.1:6910194-6910213 MS.gene030500:intron 30.0%
AAGTCCTTTCAGTATTTGTA+TGG + chr4.1:6909182-6909201 None:intergenic 30.0%
ACATCACGAAAGAGAAAAAT+TGG + chr4.1:6908199-6908218 None:intergenic 30.0%
ACATTACACAAACGCATTAT+TGG - chr4.1:6910351-6910370 MS.gene030500:CDS 30.0%
ACATTCTGGGTAATAAATAG+TGG - chr4.1:6910085-6910104 MS.gene030500:CDS 30.0%
AGCAAAAATCAAGTCATGTT+TGG + chr4.1:6907541-6907560 None:intergenic 30.0%
AGGTTATAATCCTAGTTATG+GGG - chr4.1:6911109-6911128 MS.gene030500:CDS 30.0%
ATAGATTTGATTGATGAAGC+TGG - chr4.1:6909627-6909646 MS.gene030500:intron 30.0%
ATATGAGTGAATTCATGGAA+AGG - chr4.1:6910556-6910575 MS.gene030500:intron 30.0%
ATCCAAATTCCTTTACATTC+TGG - chr4.1:6910071-6910090 MS.gene030500:CDS 30.0%
ATCTTTCTTCAAATTCTCCA+CGG + chr4.1:6908660-6908679 None:intergenic 30.0%
ATGTAATCTCACTGGAAAAA+AGG + chr4.1:6909925-6909944 None:intergenic 30.0%
CATTCTGGGTAATAAATAGT+GGG - chr4.1:6910086-6910105 MS.gene030500:CDS 30.0%
CTATGAAATGTAAAGACTGA+AGG - chr4.1:6909025-6909044 MS.gene030500:CDS 30.0%
GAAACCATACAAATACTGAA+AGG - chr4.1:6909175-6909194 MS.gene030500:intron 30.0%
GAAGATAACAAGATAGAAGA+AGG + chr4.1:6909525-6909544 None:intergenic 30.0%
GAAGGTTATAATCCTAGTTA+TGG - chr4.1:6911107-6911126 MS.gene030500:CDS 30.0%
GTTGAGTATCCTAAAAATGT+GGG + chr4.1:6909900-6909919 None:intergenic 30.0%
TAACAATAAGATGCCAACTT+TGG - chr4.1:6908067-6908086 MS.gene030500:intron 30.0%
TCCAAATTCCTTTACATTCT+GGG - chr4.1:6910072-6910091 MS.gene030500:CDS 30.0%
TCTTGATATGAGTGAATTCA+TGG - chr4.1:6910551-6910570 MS.gene030500:intron 30.0%
TCTTTCCTAAAGTTCTATAG+CGG - chr4.1:6909989-6910008 MS.gene030500:intron 30.0%
TTAAACCGAAGTTAATCATC+TGG - chr4.1:6909401-6909420 MS.gene030500:CDS 30.0%
TTATAACAGAATCAAGAGCT+TGG - chr4.1:6910890-6910909 MS.gene030500:CDS 30.0%
TTCAGTATTTGTATGGTTTC+AGG + chr4.1:6909175-6909194 None:intergenic 30.0%
TTGAGTATCCTAAAAATGTG+GGG + chr4.1:6909899-6909918 None:intergenic 30.0%
TTTCCAGGTCACAATTATAT+CGG - chr4.1:6907756-6907775 MS.gene030500:CDS 30.0%
TTTGTTTGAAGACATTGTAG+TGG - chr4.1:6910027-6910046 MS.gene030500:intron 30.0%
! TAACATAACCCCACATTTTT+AGG - chr4.1:6909888-6909907 MS.gene030500:CDS 30.0%
!! ATCAAATCTATAGCTTTGTC+AGG + chr4.1:6909618-6909637 None:intergenic 30.0%
!! TGTGGAATTTTAGTACTTTC+GGG - chr4.1:6908550-6908569 MS.gene030500:CDS 30.0%
!! TTTTGCTTTGAGTGATCTAT+CGG - chr4.1:6907554-6907573 MS.gene030500:CDS 30.0%
AAACAAAAGAACAGAAAGGC+CGG + chr4.1:6907653-6907672 None:intergenic 35.0%
AAAGATAAAACAGCCTTACG+TGG + chr4.1:6909974-6909993 None:intergenic 35.0%
AATCTTGTACTCCACTTGAT+GGG - chr4.1:6907977-6907996 MS.gene030500:CDS 35.0%
ACATAAATCACGCCAATTCA+TGG + chr4.1:6907625-6907644 None:intergenic 35.0%
ACCCAGAATGTAAAGGAATT+TGG + chr4.1:6910076-6910095 None:intergenic 35.0%
ACCTTAATTTCTGAATAGGC+TGG - chr4.1:6910117-6910136 MS.gene030500:CDS 35.0%
ACTCATATCAAGACGAATCA+TGG + chr4.1:6910544-6910563 None:intergenic 35.0%
AGAGCTAAGGGATAAAGAAA+TGG - chr4.1:6910140-6910159 MS.gene030500:CDS 35.0%
AGCACGTGTTCTTGAAAATT+TGG - chr4.1:6907827-6907846 MS.gene030500:CDS 35.0%
AGCTGTCGCATCAATATATT+AGG - chr4.1:6909266-6909285 MS.gene030500:intron 35.0%
AGGAGCTGAAACAATACTTT+AGG - chr4.1:6910919-6910938 MS.gene030500:CDS 35.0%
AGGCATGTCAATAACAACAA+AGG - chr4.1:6906916-6906935 MS.gene030500:CDS 35.0%
AGGTAGAGAAGATAATTGGA+AGG - chr4.1:6907328-6907347 MS.gene030500:CDS 35.0%
ATGATGACATAATACTTGCC+TGG + chr4.1:6907878-6907897 None:intergenic 35.0%
ATGCTTCAAATCCTAGAAGA+TGG - chr4.1:6910726-6910745 MS.gene030500:intron 35.0%
ATTGGTACTAATCGAGCTAA+GGG - chr4.1:6907090-6907109 MS.gene030500:CDS 35.0%
CATCTGTCATGAAGAAAACT+AGG + chr4.1:6908144-6908163 None:intergenic 35.0%
CATTGAAAAAGATCCAGCTT+TGG - chr4.1:6909108-6909127 MS.gene030500:intron 35.0%
CCACAACTCTAGATGAATAT+AGG - chr4.1:6909080-6909099 MS.gene030500:CDS 35.0%
CCTGGAAATTGCAAAATGTA+AGG + chr4.1:6907744-6907763 None:intergenic 35.0%
CTTTCCTAAAGTTCTATAGC+GGG - chr4.1:6909990-6910009 MS.gene030500:intron 35.0%
GAGCAAGTTAAACATGTTCA+AGG + chr4.1:6908503-6908522 None:intergenic 35.0%
GCACCTTAGAATGAAAATCT+TGG + chr4.1:6907062-6907081 None:intergenic 35.0%
GCACGTGTTCTTGAAAATTT+GGG - chr4.1:6907828-6907847 MS.gene030500:CDS 35.0%
GGAACTGAACAGATTCTATT+GGG - chr4.1:6907228-6907247 MS.gene030500:CDS 35.0%
GGTAGAGAAGATAATTGGAA+GGG - chr4.1:6907329-6907348 MS.gene030500:CDS 35.0%
GGTTGAGTATCCTAAAAATG+TGG + chr4.1:6909901-6909920 None:intergenic 35.0%
GTAGAGAAGATAATTGGAAG+GGG - chr4.1:6907330-6907349 MS.gene030500:CDS 35.0%
GTCAAAATCACAGGGAAAAT+TGG - chr4.1:6908217-6908236 MS.gene030500:intron 35.0%
TAATCTCACTGGAAAAAAGG+TGG + chr4.1:6909922-6909941 None:intergenic 35.0%
TAATCTTGTACTCCACTTGA+TGG - chr4.1:6907976-6907995 MS.gene030500:CDS 35.0%
TACAACATATTGTTGCCTCT+TGG - chr4.1:6910265-6910284 MS.gene030500:intron 35.0%
TAGGTTATAACCCTAGACAT+GGG - chr4.1:6908610-6908629 MS.gene030500:intron 35.0%
TCAGTATAACCAACATATCC+TGG + chr4.1:6910612-6910631 None:intergenic 35.0%
TCCAGCCTATTCAGAAATTA+AGG + chr4.1:6910121-6910140 None:intergenic 35.0%
TGATGACATAATACTTGCCT+GGG + chr4.1:6907877-6907896 None:intergenic 35.0%
TGCTTCAAATCCTAGAAGAT+GGG - chr4.1:6910727-6910746 MS.gene030500:intron 35.0%
TGGAACTGAACAGATTCTAT+TGG - chr4.1:6907227-6907246 MS.gene030500:CDS 35.0%
TTAGAATGAAAATCTTGGCC+AGG + chr4.1:6907057-6907076 None:intergenic 35.0%
TTCAGATCCAAAGTAGTATG+AGG + chr4.1:6910517-6910536 None:intergenic 35.0%
TTCGTGATGTCAAAATCACA+GGG - chr4.1:6908209-6908228 MS.gene030500:intron 35.0%
TTGGATTCAATGTTTAGACC+TGG - chr4.1:6907036-6907055 MS.gene030500:CDS 35.0%
TTTCGTGATGTCAAAATCAC+AGG - chr4.1:6908208-6908227 MS.gene030500:intron 35.0%
! AGGATATGTTGGTTATACTG+AGG - chr4.1:6910611-6910630 MS.gene030500:intron 35.0%
! CAGATTCTATTGGGTCTTAT+TGG - chr4.1:6907237-6907256 MS.gene030500:CDS 35.0%
! CCTATATTCATCTAGAGTTG+TGG + chr4.1:6909083-6909102 None:intergenic 35.0%
! CCTTACATTTTGCAATTTCC+AGG - chr4.1:6907741-6907760 MS.gene030500:CDS 35.0%
! GCATTACCTTTTCAAACTCT+TGG + chr4.1:6909840-6909859 None:intergenic 35.0%
! GGATATGTTGGTTATACTGA+GGG - chr4.1:6910612-6910631 MS.gene030500:intron 35.0%
! TGATTTTATTCAGGGGGTAA+GGG - chr4.1:6908455-6908474 MS.gene030500:intron 35.0%
! TGGCCAAGATTTTCATTCTA+AGG - chr4.1:6907056-6907075 MS.gene030500:CDS 35.0%
! TTGATTTTATTCAGGGGGTA+AGG - chr4.1:6908454-6908473 MS.gene030500:intron 35.0%
!! AAAGTATTGTTTCAGCTCCT+CGG + chr4.1:6910919-6910938 None:intergenic 35.0%
!! CAAAGTAATTATGTTGGCTC+AGG - chr4.1:6907173-6907192 MS.gene030500:CDS 35.0%
!! CTAGTTTTCTTCATGACAGA+TGG - chr4.1:6908142-6908161 MS.gene030500:intron 35.0%
!! GATAGCGGATATAATGTTGA+AGG - chr4.1:6911010-6911029 MS.gene030500:CDS 35.0%
!!! ATCTTTTAGGTTAATCCCCA+TGG + chr4.1:6907298-6907317 None:intergenic 35.0%
AACCTACATCATGCAGAACA+AGG + chr4.1:6908596-6908615 None:intergenic 40.0%
AAGATAATTGGAAGGGGAAG+TGG - chr4.1:6907336-6907355 MS.gene030500:CDS 40.0%
AATAACCTGTTCCCATCAAG+TGG + chr4.1:6907991-6908010 None:intergenic 40.0%
ACTCACTAAACTGGAGGTTA+AGG - chr4.1:6910986-6911005 MS.gene030500:CDS 40.0%
AGATAGTAAGGGAAGAACTG+TGG - chr4.1:6910758-6910777 MS.gene030500:CDS 40.0%
AGCATCATGTTGAAGACATC+AGG + chr4.1:6910711-6910730 None:intergenic 40.0%
AGCGGATATAATGTTGAAGG+AGG - chr4.1:6911013-6911032 MS.gene030500:CDS 40.0%
ATACCTGTGCATGTTGAAGT+CGG + chr4.1:6909662-6909681 None:intergenic 40.0%
ATACTTGCAGTTACCTGAAG+AGG - chr4.1:6909753-6909772 MS.gene030500:intron 40.0%
ATAGACGAGAAAAGAACTGC+TGG + chr4.1:6909707-6909726 None:intergenic 40.0%
ATCTGATCGTCTTCTCAAGA+TGG - chr4.1:6910323-6910342 MS.gene030500:CDS 40.0%
CAAACCCGCTATAGAACTTT+AGG + chr4.1:6909997-6910016 None:intergenic 40.0%
CAAGAGCCTCATCAGTATAA+CGG + chr4.1:6909234-6909253 None:intergenic 40.0%
CAATAAGATGCCAACTTTGG+AGG - chr4.1:6908070-6908089 MS.gene030500:intron 40.0%
CACTGAGAGTTCAATCTCTT+TGG + chr4.1:6911057-6911076 None:intergenic 40.0%
CATGTTGAAGACATCAGGAT+GGG + chr4.1:6910706-6910725 None:intergenic 40.0%
CTCAGTGACAGAGAGATTTA+GGG - chr4.1:6911070-6911089 MS.gene030500:CDS 40.0%
CTCTGTAAAACGCTCAAACA+TGG + chr4.1:6907145-6907164 None:intergenic 40.0%
CTTCTTTCCCTCTATGGTTT+CGG + chr4.1:6908396-6908415 None:intergenic 40.0%
CTTGCTAGGGAGATTAAAGA+GGG - chr4.1:6911191-6911210 MS.gene030500:CDS 40.0%
GAAGAAAAGTAAGCCACGTA+AGG - chr4.1:6909958-6909977 MS.gene030500:intron 40.0%
GAGGTCTTGAAAAGGAAGTT+AGG - chr4.1:6909779-6909798 MS.gene030500:CDS 40.0%
GATCCGATATAATTGTGACC+TGG + chr4.1:6907762-6907781 None:intergenic 40.0%
GATGAAGTGCACACTCTAAT+TGG - chr4.1:6908733-6908752 MS.gene030500:intron 40.0%
GATTGGTACTAATCGAGCTA+AGG - chr4.1:6907089-6907108 MS.gene030500:CDS 40.0%
GGAAAATTGGATCCTGTTGT+GGG - chr4.1:6908230-6908249 MS.gene030500:intron 40.0%
GGAAGTTAGGCAGATAGTAA+AGG - chr4.1:6909792-6909811 MS.gene030500:CDS 40.0%
GTAGGTTATAACCCTAGACA+TGG - chr4.1:6908609-6908628 MS.gene030500:intron 40.0%
GTATAACCAACATATCCTGG+AGG + chr4.1:6910609-6910628 None:intergenic 40.0%
GTCGAGGTAGAGAAGATAAT+TGG - chr4.1:6907324-6907343 MS.gene030500:CDS 40.0%
TACAAGTAGACCCATGTCTA+GGG + chr4.1:6908623-6908642 None:intergenic 40.0%
TATCCCTGTTGACAAAGTCT+CGG - chr4.1:6910293-6910312 MS.gene030500:intron 40.0%
TCAAGCCTATTCAAGAACTC+TGG + chr4.1:6910945-6910964 None:intergenic 40.0%
TCATGTTGAAGACATCAGGA+TGG + chr4.1:6910707-6910726 None:intergenic 40.0%
TCGCAACCAAGAGTTTGAAA+AGG - chr4.1:6909831-6909850 MS.gene030500:CDS 40.0%
TCTCAGTGACAGAGAGATTT+AGG - chr4.1:6911069-6911088 MS.gene030500:CDS 40.0%
TGAGTGACACGTTCAATTTG+TGG + chr4.1:6908263-6908282 None:intergenic 40.0%
TGTATGGTTTCAGGAACAGT+TGG + chr4.1:6909166-6909185 None:intergenic 40.0%
TGTCCTTCTCATCATAGTCA+AGG + chr4.1:6910866-6910885 None:intergenic 40.0%
TTAGGCCAGAGTTCTTGAAT+AGG - chr4.1:6910937-6910956 MS.gene030500:CDS 40.0%
TTCAAATCCTAGAAGATGGG+AGG - chr4.1:6910730-6910749 MS.gene030500:intron 40.0%
TTCTTTCCCTCTATGGTTTC+GGG + chr4.1:6908395-6908414 None:intergenic 40.0%
TTGGACTTAAGAACCCTAAC+AGG - chr4.1:6910424-6910443 MS.gene030500:intron 40.0%
TTTCAGGCAACTCACTAAAC+TGG - chr4.1:6910977-6910996 MS.gene030500:CDS 40.0%
! ATCAAAGAGTACAACCGTGT+AGG + chr4.1:6910670-6910689 None:intergenic 40.0%
! GAACGTGTCACTCAAATCTT+GGG - chr4.1:6908269-6908288 MS.gene030500:intron 40.0%
! GATTTTATTCAGGGGGTAAG+GGG - chr4.1:6908456-6908475 MS.gene030500:intron 40.0%
! GGCGTGATTTATGTTTTGTC+CGG - chr4.1:6907631-6907650 MS.gene030500:CDS 40.0%
! TATGTTGGTTATACTGAGGG+TGG - chr4.1:6910615-6910634 MS.gene030500:intron 40.0%
! TCAAAGAGTACAACCGTGTA+GGG + chr4.1:6910669-6910688 None:intergenic 40.0%
! TGAACGTGTCACTCAAATCT+TGG - chr4.1:6908268-6908287 MS.gene030500:intron 40.0%
!! AAAAAGATCCAGCTTTGGAG+AGG - chr4.1:6909113-6909132 MS.gene030500:intron 40.0%
!! AGAAAAGAACTGCTGGTTCA+GGG + chr4.1:6909700-6909719 None:intergenic 40.0%
!! AGTAATTATGTTGGCTCAGG+AGG - chr4.1:6907176-6907195 MS.gene030500:CDS 40.0%
!! ATAGTGGATGCTGATTCTGA+TGG - chr4.1:6911224-6911243 MS.gene030500:CDS 40.0%
!! CTATTGGGTCTTATTGGTGA+AGG - chr4.1:6907243-6907262 MS.gene030500:CDS 40.0%
!! CTTTTGGGTCTTCTTAGAGA+GGG - chr4.1:6907792-6907811 MS.gene030500:CDS 40.0%
!!! CTAAGGTTTTGAAGTCCATG+GGG - chr4.1:6907280-6907299 MS.gene030500:CDS 40.0%
!!! GCTAAGGTTTTGAAGTCCAT+GGG - chr4.1:6907279-6907298 MS.gene030500:CDS 40.0%
AAGCAGTAGAAGCCATTAGC+AGG - chr4.1:6910382-6910401 MS.gene030500:CDS 45.0%
AAGGAGCAGCTAGATCAAGA+AGG - chr4.1:6906935-6906954 MS.gene030500:CDS 45.0%
AATTGGATCCTGTTGTGGGT+AGG - chr4.1:6908234-6908253 MS.gene030500:intron 45.0%
ACAAGGCTTTCACGTCATTC+AGG + chr4.1:6908579-6908598 None:intergenic 45.0%
ACCAACCTTCTTTCCCTCTA+TGG + chr4.1:6908402-6908421 None:intergenic 45.0%
ACCATAGAGGGAAAGAAGGT+TGG - chr4.1:6908398-6908417 MS.gene030500:intron 45.0%
ACCCAGACTGTCTAGTTACT+CGG - chr4.1:6906993-6907012 MS.gene030500:CDS 45.0%
ACTGGAGGTTAAGGAGATAG+CGG - chr4.1:6910995-6911014 MS.gene030500:CDS 45.0%
AGACATGGGTCTACTTGTAG+CGG - chr4.1:6908624-6908643 MS.gene030500:intron 45.0%
AGAGAGATTTAGGGAGAGAG+TGG - chr4.1:6911079-6911098 MS.gene030500:CDS 45.0%
AGAGGCAAGAGGTCTTGAAA+AGG - chr4.1:6909771-6909790 MS.gene030500:CDS 45.0%
AGCAGTAGAAGCCATTAGCA+GGG - chr4.1:6910383-6910402 MS.gene030500:CDS 45.0%
AGTCTTGGAACTCTCATTGG+AGG - chr4.1:6907401-6907420 MS.gene030500:CDS 45.0%
ATAATCCTAGTTATGGGGCC+AGG - chr4.1:6911114-6911133 MS.gene030500:CDS 45.0%
ATGGGAACAGGTTATTCGCA+TGG - chr4.1:6907995-6908014 MS.gene030500:CDS 45.0%
ATTGTGCTCAACGGTAGTAC+TGG - chr4.1:6911254-6911273 MS.gene030500:CDS 45.0%
CAACCGAGACTTTGTCAACA+GGG + chr4.1:6910299-6910318 None:intergenic 45.0%
CAAGCTCCGTTATACTGATG+AGG - chr4.1:6909225-6909244 MS.gene030500:intron 45.0%
CAATTTGACCAAGCTAGCAG+AGG - chr4.1:6908103-6908122 MS.gene030500:intron 45.0%
CACACAGTCTCCAAACTCAT+TGG - chr4.1:6910579-6910598 MS.gene030500:intron 45.0%
CATATTGTTGCCTCTTGGAC+TGG - chr4.1:6910270-6910289 MS.gene030500:intron 45.0%
CATTTGCAATCCGTTGAGCA+AGG + chr4.1:6908364-6908383 None:intergenic 45.0%
CGAAACCATAGAGGGAAAGA+AGG - chr4.1:6908394-6908413 MS.gene030500:intron 45.0%
CTACAAGTAGACCCATGTCT+AGG + chr4.1:6908624-6908643 None:intergenic 45.0%
GAAAAGATGAAGCTGGCGAT+TGG + chr4.1:6910450-6910469 None:intergenic 45.0%
GAACAGGTTATTCGCATGGT+TGG - chr4.1:6907999-6908018 MS.gene030500:CDS 45.0%
GAGAGTCTTGGAACTCTCAT+TGG - chr4.1:6907398-6907417 MS.gene030500:CDS 45.0%
GATTAATGTCCCTGGTCTAG+TGG - chr4.1:6906885-6906904 MS.gene030500:CDS 45.0%
GGAAACGTGATTGTGCTCAA+CGG - chr4.1:6911245-6911264 MS.gene030500:CDS 45.0%
GGGAAAATTGGATCCTGTTG+TGG - chr4.1:6908229-6908248 MS.gene030500:intron 45.0%
GGGAGGCTAACAGATAGTAA+GGG - chr4.1:6910747-6910766 MS.gene030500:CDS 45.0%
GTCCTCCAAAAGTCGCATTA+TGG + chr4.1:6911153-6911172 None:intergenic 45.0%
GTCTCGCATAGTGCTTGTAT+GGG - chr4.1:6909483-6909502 MS.gene030500:CDS 45.0%
GTCTGAATTGGCTAAGGCAT+TGG - chr4.1:6910491-6910510 MS.gene030500:intron 45.0%
GTTACTACTTCCAGAGCCAA+CGG + chr4.1:6908051-6908070 None:intergenic 45.0%
TCAACCGAGACTTTGTCAAC+AGG + chr4.1:6910300-6910319 None:intergenic 45.0%
TCCAACTAATATTCGCACCC+AGG - chr4.1:6907857-6907876 MS.gene030500:CDS 45.0%
TCTTGCTAGAGGTGAACTAC+AGG - chr4.1:6908807-6908826 MS.gene030500:intron 45.0%
TCTTTCCCTCTATGGTTTCG+GGG + chr4.1:6908394-6908413 None:intergenic 45.0%
TGAATAGGCTGGAGAGCTAA+GGG - chr4.1:6910128-6910147 MS.gene030500:CDS 45.0%
TGAGAGTTCCAAGACTCTCT+TGG + chr4.1:6907397-6907416 None:intergenic 45.0%
TGGAGGTGAACCAATGAGTT+TGG + chr4.1:6910592-6910611 None:intergenic 45.0%
TGGCTGAAAAGATGCTTGCT+AGG - chr4.1:6911177-6911196 MS.gene030500:CDS 45.0%
TGGGAGGCTAACAGATAGTA+AGG - chr4.1:6910746-6910765 MS.gene030500:CDS 45.0%
TGGTGAAGGAACTGGTATTG+CGG - chr4.1:6907257-6907276 MS.gene030500:CDS 45.0%
TGTCTCGCATAGTGCTTGTA+TGG - chr4.1:6909482-6909501 MS.gene030500:CDS 45.0%
! ACGAGCCATAATGCGACTTT+TGG - chr4.1:6911145-6911164 MS.gene030500:CDS 45.0%
! AGAGCATCTGGCAATGAATC+TGG + chr4.1:6911284-6911303 None:intergenic 45.0%
! AGCCATAATGCGACTTTTGG+AGG - chr4.1:6911148-6911167 MS.gene030500:CDS 45.0%
! ATCGCCAGCTTCATCTTTTC+TGG - chr4.1:6910450-6910469 MS.gene030500:intron 45.0%
! ATGCCAACTTTGGAGGAGTA+TGG - chr4.1:6908077-6908096 MS.gene030500:intron 45.0%
! CATCAGTATAACGGAGCTTG+TGG + chr4.1:6909225-6909244 None:intergenic 45.0%
! CTCTGCTAGCTTGGTCAAAT+TGG + chr4.1:6908105-6908124 None:intergenic 45.0%
! GCATTGGCCTCATACTACTT+TGG - chr4.1:6910507-6910526 MS.gene030500:intron 45.0%
! GCTTGCTAGGGAGATTAAAG+AGG - chr4.1:6911190-6911209 MS.gene030500:CDS 45.0%
! GGCTGAAAAGATGCTTGCTA+GGG - chr4.1:6911178-6911197 MS.gene030500:CDS 45.0%
! TCTAAGGTGCTCACTCAGAT+TGG - chr4.1:6907072-6907091 MS.gene030500:CDS 45.0%
!! AAACTCATTGGTTCACCTCC+AGG - chr4.1:6910591-6910610 MS.gene030500:intron 45.0%
!! AATTATGTTGGCTCAGGAGG+AGG - chr4.1:6907179-6907198 MS.gene030500:CDS 45.0%
!! AGCCTTGTTCTGCATGATGT+AGG - chr4.1:6908591-6908610 MS.gene030500:intron 45.0%
!! CTTGCTCAACGGATTGCAAA+TGG - chr4.1:6908362-6908381 MS.gene030500:CDS 45.0%
!! GAGAAAAGAACTGCTGGTTC+AGG + chr4.1:6909701-6909720 None:intergenic 45.0%
!! GCTTTTGGGTCTTCTTAGAG+AGG - chr4.1:6907791-6907810 MS.gene030500:CDS 45.0%
!! GGATCTGAGCACTTGCTTTT+GGG - chr4.1:6907777-6907796 MS.gene030500:CDS 45.0%
!! GGTCTTATTGGTGAAGGAAC+TGG - chr4.1:6907249-6907268 MS.gene030500:CDS 45.0%
!! GTTATTCGCATGGTTGGTGA+GGG - chr4.1:6908005-6908024 MS.gene030500:CDS 45.0%
!! TTCATCTTTTCTGGCCCTAC+TGG - chr4.1:6910459-6910478 MS.gene030500:intron 45.0%
!!! GGCTAAGGTTTTGAAGTCCA+TGG - chr4.1:6907278-6907297 MS.gene030500:CDS 45.0%
!! ATATAATAAAAATACATAAA+AGG + chr4.1:6907906-6907925 None:intergenic 5.0%
AACAGGGATACCAGTCCAAG+AGG + chr4.1:6910283-6910302 None:intergenic 50.0%
AATCGAGCTAAGGGTGGTAG+AGG - chr4.1:6907099-6907118 MS.gene030500:CDS 50.0%
AGAGGGCGACTCTGTTATAG+TGG - chr4.1:6911208-6911227 MS.gene030500:CDS 50.0%
AGCAGTGTGATCGAGAAAGG+AGG - chr4.1:6910822-6910841 MS.gene030500:CDS 50.0%
AGCTGAAGGGGCAATTGATG+CGG - chr4.1:6908765-6908784 MS.gene030500:intron 50.0%
AGGAACTGGTATTGCGGCTA+AGG - chr4.1:6907263-6907282 MS.gene030500:CDS 50.0%
AGGGCCAGAAAAGATGAAGC+TGG + chr4.1:6910457-6910476 None:intergenic 50.0%
AGTCCGACTTCAACATGCAC+AGG - chr4.1:6909656-6909675 MS.gene030500:intron 50.0%
AGTTACCTCCTCTGCTAGCT+TGG + chr4.1:6908114-6908133 None:intergenic 50.0%
AGTTCACCTCTAGCAAGAGC+TGG + chr4.1:6908805-6908824 None:intergenic 50.0%
CAGGCAACTCACTAAACTGG+AGG - chr4.1:6910980-6910999 MS.gene030500:CDS 50.0%
CAGTTACCTGAAGAGGCAAG+AGG - chr4.1:6909760-6909779 MS.gene030500:CDS 50.0%
CCAGGTTCCCCAATAAGACA+AGG + chr4.1:6908314-6908333 None:intergenic 50.0%
CCCAGACTGTCTAGTTACTC+GGG - chr4.1:6906994-6907013 MS.gene030500:CDS 50.0%
CCCGAGTAACTAGACAGTCT+GGG + chr4.1:6906997-6907016 None:intergenic 50.0%
CCTAAAAGATGCACGTGTCG+AGG - chr4.1:6907308-6907327 MS.gene030500:CDS 50.0%
CGCATTATGGCTCGTCTTAG+AGG + chr4.1:6911140-6911159 None:intergenic 50.0%
CTGAATAGGCTGGAGAGCTA+AGG - chr4.1:6910127-6910146 MS.gene030500:CDS 50.0%
CTTATTGGGGAACCTGGTGT+CGG - chr4.1:6908317-6908336 MS.gene030500:intron 50.0%
GACATGGGTCTACTTGTAGC+GGG - chr4.1:6908625-6908644 MS.gene030500:intron 50.0%
GATGAACAAGGCAGAGAGTG+AGG - chr4.1:6910206-6910225 MS.gene030500:intron 50.0%
GATGTCCCCGAAACCATAGA+GGG - chr4.1:6908386-6908405 MS.gene030500:CDS 50.0%
GCCTGGGTGCGAATATTAGT+TGG + chr4.1:6907861-6907880 None:intergenic 50.0%
GCTCTGGCACTTTAACAGGT+TGG + chr4.1:6909144-6909163 None:intergenic 50.0%
GGAAAGACAGCCATTGCTGA+AGG - chr4.1:6908338-6908357 MS.gene030500:CDS 50.0%
GGAAGCAGTGTGATCGAGAA+AGG - chr4.1:6910819-6910838 MS.gene030500:CDS 50.0%
GGGGAAGTCTGAATTGGCTA+AGG - chr4.1:6910485-6910504 MS.gene030500:intron 50.0%
GGTACTAATCGAGCTAAGGG+TGG - chr4.1:6907093-6907112 MS.gene030500:CDS 50.0%
GGTCTTCTTAGAGAGGGTGA+AGG - chr4.1:6907798-6907817 MS.gene030500:CDS 50.0%
GGTTCACCTCCAGGATATGT+TGG - chr4.1:6910600-6910619 MS.gene030500:intron 50.0%
GTACTCCACTTGATGGGAAC+AGG - chr4.1:6907983-6908002 MS.gene030500:CDS 50.0%
GTCAACTGACTGAGGCAGTT+CGG - chr4.1:6910637-6910656 MS.gene030500:intron 50.0%
GTGCACACTCTAATTGGAGC+AGG - chr4.1:6908739-6908758 MS.gene030500:intron 50.0%
GTGCATGTTGAAGTCGGACT+CGG + chr4.1:6909656-6909675 None:intergenic 50.0%
GTGCCATACTCCTCCAAAGT+TGG + chr4.1:6908083-6908102 None:intergenic 50.0%
TAAGTCCAACACGAGCTCGA+CGG + chr4.1:6910413-6910432 None:intergenic 50.0%
TCAAGACCTCTTGCCTCTTC+AGG + chr4.1:6909769-6909788 None:intergenic 50.0%
TCCCGAGTAACTAGACAGTC+TGG + chr4.1:6906998-6907017 None:intergenic 50.0%
TCTTAGAGAGGGTGAAGGTG+TGG - chr4.1:6907803-6907822 MS.gene030500:CDS 50.0%
TGATGTCCCCGAAACCATAG+AGG - chr4.1:6908385-6908404 MS.gene030500:CDS 50.0%
TGCATGTTGAAGTCGGACTC+GGG + chr4.1:6909655-6909674 None:intergenic 50.0%
TGGTGTGGGGAAGTCTGAAT+TGG - chr4.1:6910479-6910498 MS.gene030500:intron 50.0%
TTGAAGCCAGCTCTTGCTAG+AGG - chr4.1:6908796-6908815 MS.gene030500:intron 50.0%
TTGAGCAAGGCCTTCAGCAA+TGG + chr4.1:6908351-6908370 None:intergenic 50.0%
TTGCTGAAGGCCTTGCTCAA+CGG - chr4.1:6908351-6908370 MS.gene030500:CDS 50.0%
TTGGAGGAAGCTCGTCAACT+TGG - chr4.1:6907417-6907436 MS.gene030500:CDS 50.0%
TTTGACCAAGCTAGCAGAGG+AGG - chr4.1:6908106-6908125 MS.gene030500:intron 50.0%
! AATCAAGAGCTTGGTGACCG+AGG - chr4.1:6910899-6910918 MS.gene030500:CDS 50.0%
! CCTCGACACGTGCATCTTTT+AGG + chr4.1:6907311-6907330 None:intergenic 50.0%
! CCTTGTCTTATTGGGGAACC+TGG - chr4.1:6908311-6908330 MS.gene030500:intron 50.0%
! CGGATCTGAGCACTTGCTTT+TGG - chr4.1:6907776-6907795 MS.gene030500:CDS 50.0%
! CGGCTGGGACACAATTTTGT+TGG - chr4.1:6907207-6907226 MS.gene030500:CDS 50.0%
! CTGTTAGCCTCCCATCTTCT+AGG + chr4.1:6910740-6910759 None:intergenic 50.0%
! GGTTATTCGCATGGTTGGTG+AGG - chr4.1:6908004-6908023 MS.gene030500:CDS 50.0%
! GTAGCGGGAACTAAATACCG+TGG - chr4.1:6908640-6908659 MS.gene030500:intron 50.0%
! GTTTCAGGAACAGTTGGCTC+TGG + chr4.1:6909160-6909179 None:intergenic 50.0%
!! AGAACTGCTGGTTCAGGGAA+TGG + chr4.1:6909695-6909714 None:intergenic 50.0%
!! GTGAGGGTGCTGATAGTGTT+GGG - chr4.1:6908021-6908040 MS.gene030500:CDS 50.0%
!! GTTGGCTCTGGCACTTTAAC+AGG + chr4.1:6909148-6909167 None:intergenic 50.0%
!! TGAGGGTGCTGATAGTGTTG+GGG - chr4.1:6908022-6908041 MS.gene030500:intron 50.0%
!! TTTTCTGGCCCTACTGGTGT+GGG - chr4.1:6910465-6910484 MS.gene030500:intron 50.0%
AACAAGGCAGAGAGTGAGGC+AGG - chr4.1:6910210-6910229 MS.gene030500:intron 55.0%
AATGTCCCTGGTCTAGTGGC+TGG - chr4.1:6906889-6906908 MS.gene030500:CDS 55.0%
ATGGCTGTCTTTCCGACACC+AGG + chr4.1:6908332-6908351 None:intergenic 55.0%
ATTGGAGCAGGAGCAGCTGA+AGG - chr4.1:6908751-6908770 MS.gene030500:intron 55.0%
CAAGACTCTCTTGGCACGTG+GGG + chr4.1:6907388-6907407 None:intergenic 55.0%
CAGACTTCCCCACACCAGTA+GGG + chr4.1:6910476-6910495 None:intergenic 55.0%
CCAAGACTCTCTTGGCACGT+GGG + chr4.1:6907389-6907408 None:intergenic 55.0%
CTCTTGGCACGTGGGGTAAA+CGG + chr4.1:6907381-6907400 None:intergenic 55.0%
GAGAGTGAGGCAGGAGATGT+AGG - chr4.1:6910219-6910238 MS.gene030500:intron 55.0%
GCGCAGTCGATTAATGTCCC+TGG - chr4.1:6906877-6906896 MS.gene030500:CDS 55.0%
TATGGCTCGTCTTAGAGGCC+TGG + chr4.1:6911135-6911154 None:intergenic 55.0%
TCAGACTTCCCCACACCAGT+AGG + chr4.1:6910477-6910496 None:intergenic 55.0%
TCCAAGACTCTCTTGGCACG+TGG + chr4.1:6907390-6907409 None:intergenic 55.0%
TCGACGGATAGCCCTGCTAA+TGG + chr4.1:6910397-6910416 None:intergenic 55.0%
TGAGGGTGGTCAACTGACTG+AGG - chr4.1:6910629-6910648 MS.gene030500:intron 55.0%
TGGAATCGCCTCTCCAAAGC+TGG + chr4.1:6909124-6909143 None:intergenic 55.0%
TTCGACCAGCCACTAGACCA+GGG + chr4.1:6906897-6906916 None:intergenic 55.0%
TTGGAGCAGGAGCAGCTGAA+GGG - chr4.1:6908752-6908771 MS.gene030500:intron 55.0%
! GATAGTGTTGGGGCTACCGT+TGG - chr4.1:6908032-6908051 MS.gene030500:intron 55.0%
! TTTCTGGCCCTACTGGTGTG+GGG - chr4.1:6910466-6910485 MS.gene030500:intron 55.0%
!! AAGCTGGCGATTGGCCTGTT+AGG + chr4.1:6910441-6910460 None:intergenic 55.0%
!! ACTGCTGGTTCAGGGAATGG+TGG + chr4.1:6909692-6909711 None:intergenic 55.0%
!! AGCTGGCGATTGGCCTGTTA+GGG + chr4.1:6910440-6910459 None:intergenic 55.0%
!! CTTTTCTGGCCCTACTGGTG+TGG - chr4.1:6910464-6910483 MS.gene030500:intron 55.0%
!! GCGACTTTTGGAGGACAGCA+TGG - chr4.1:6911157-6911176 MS.gene030500:CDS 55.0%
!! GGTGAGGGTGCTGATAGTGT+TGG - chr4.1:6908020-6908039 MS.gene030500:CDS 55.0%
AGAGGCCTGGCCCCATAACT+AGG + chr4.1:6911122-6911141 None:intergenic 60.0%
AGGGAGAGAGTGGTCGACGA+AGG - chr4.1:6911089-6911108 MS.gene030500:CDS 60.0%
AGTTCGGCGTCGTCCCTACA+CGG - chr4.1:6910653-6910672 MS.gene030500:intron 60.0%
CCCACGTGCCAAGAGAGTCT+TGG - chr4.1:6907386-6907405 MS.gene030500:CDS 60.0%
CTTCGACCAGCCACTAGACC+AGG + chr4.1:6906898-6906917 None:intergenic 60.0%
GAGAAAGGAGGCCGTCGCAT+AGG - chr4.1:6910834-6910853 MS.gene030500:CDS 60.0%
GCTATCCGTCGAGCTCGTGT+TGG - chr4.1:6910405-6910424 MS.gene030500:intron 60.0%
TCTGGGTGCAGCAGTTCGTG+TGG + chr4.1:6906980-6906999 None:intergenic 60.0%
TGGAGCAGGAGCAGCTGAAG+GGG - chr4.1:6908753-6908772 MS.gene030500:intron 60.0%
TGTGGCTGCCTACCCACAAC+AGG + chr4.1:6908245-6908264 None:intergenic 60.0%
! CTGGTCTAGTGGCTGGTCGA+AGG - chr4.1:6906896-6906915 MS.gene030500:CDS 60.0%
!! TGTTGGCTCAGGAGGAGGCA+AGG - chr4.1:6907184-6907203 MS.gene030500:CDS 60.0%
TGGCTCAGGAGGAGGCAAGG+CGG - chr4.1:6907187-6907206 MS.gene030500:CDS 65.0%
!! GTTGGGGCTACCGTTGGCTC+TGG - chr4.1:6908038-6908057 MS.gene030500:intron 65.0%
CAGGAGGAGGCAAGGCGGCT+GGG - chr4.1:6907192-6907211 MS.gene030500:CDS 70.0%
TCAGGAGGAGGCAAGGCGGC+TGG - chr4.1:6907191-6907210 MS.gene030500:CDS 70.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 6906862 6911313 6906862 ID=MS.gene030500
chr4.1 mRNA 6906862 6911313 6906862 ID=MS.gene030500.t1;Parent=MS.gene030500
chr4.1 exon 6910737 6911313 6910737 ID=MS.gene030500.t1.exon1;Parent=MS.gene030500.t1
chr4.1 CDS 6910737 6911313 6910737 ID=cds.MS.gene030500.t1;Parent=MS.gene030500.t1
chr4.1 exon 6910297 6910412 6910297 ID=MS.gene030500.t1.exon2;Parent=MS.gene030500.t1
chr4.1 CDS 6910297 6910412 6910297 ID=cds.MS.gene030500.t1;Parent=MS.gene030500.t1
chr4.1 exon 6910048 6910170 6910048 ID=MS.gene030500.t1.exon3;Parent=MS.gene030500.t1
chr4.1 CDS 6910048 6910170 6910048 ID=cds.MS.gene030500.t1;Parent=MS.gene030500.t1
chr4.1 exon 6909760 6909945 6909760 ID=MS.gene030500.t1.exon4;Parent=MS.gene030500.t1
chr4.1 CDS 6909760 6909945 6909760 ID=cds.MS.gene030500.t1;Parent=MS.gene030500.t1
chr4.1 exon 6909347 6909562 6909347 ID=MS.gene030500.t1.exon5;Parent=MS.gene030500.t1
chr4.1 CDS 6909347 6909562 6909347 ID=cds.MS.gene030500.t1;Parent=MS.gene030500.t1
chr4.1 exon 6908888 6909105 6908888 ID=MS.gene030500.t1.exon6;Parent=MS.gene030500.t1
chr4.1 CDS 6908888 6909105 6908888 ID=cds.MS.gene030500.t1;Parent=MS.gene030500.t1
chr4.1 exon 6908498 6908573 6908498 ID=MS.gene030500.t1.exon7;Parent=MS.gene030500.t1
chr4.1 CDS 6908498 6908573 6908498 ID=cds.MS.gene030500.t1;Parent=MS.gene030500.t1
chr4.1 exon 6908323 6908412 6908323 ID=MS.gene030500.t1.exon8;Parent=MS.gene030500.t1
chr4.1 CDS 6908323 6908412 6908323 ID=cds.MS.gene030500.t1;Parent=MS.gene030500.t1
chr4.1 exon 6906862 6908040 6906862 ID=MS.gene030500.t1.exon9;Parent=MS.gene030500.t1
chr4.1 CDS 6906862 6908040 6906862 ID=cds.MS.gene030500.t1;Parent=MS.gene030500.t1
Gene Sequence

>MS.gene030500

ATGTCGAGGGTTTTGGCGCAGTCGATTAATGTCCCTGGTCTAGTGGCTGGTCGAAGGCATGTCAATAACAACAAAGGAGCAGCTAGATCAAGAAGGTCTGTCAGAATGATGTTTACCACACGAACTGCTGCACCCAGACTGTCTAGTTACTCGGGATTACGTACTTTGAATTCTTTGGATTCAATGTTTAGACCTGGCCAAGATTTTCATTCTAAGGTGCTCACTCAGATTGGTACTAATCGAGCTAAGGGTGGTAGAGGTAGCAGATGCGTTACTAAAGCCATGTTTGAGCGTTTTACAGAGAAAGCTATCAAAGTAATTATGTTGGCTCAGGAGGAGGCAAGGCGGCTGGGACACAATTTTGTTGGAACTGAACAGATTCTATTGGGTCTTATTGGTGAAGGAACTGGTATTGCGGCTAAGGTTTTGAAGTCCATGGGGATTAACCTAAAAGATGCACGTGTCGAGGTAGAGAAGATAATTGGAAGGGGAAGTGGTTTTGTCGCTGTTGAGATTCCGTTTACCCCACGTGCCAAGAGAGTCTTGGAACTCTCATTGGAGGAAGCTCGTCAACTTGGTAAACGATAGCATACTTTTATAATGTCGTTTTGCATATCTAATCAATTACTTTGTTTACAAAAAATGTGTTCACGACTTATTATTTGTATGATATATTCCAAACATGACTTGATTTTTGCTTTGAGTGATCTATCGGTTGACTAATTTGAATTATTTTCATTCAAAGTGAGTTGAAATTTATCCATGAATTGGCGTGATTTATGTTTTGTCCGGCCTTTCTGTTCTTTTGTTTATTTTATTTGGAGTGTTTAAAAATTAGTATTCACGTGCAATACTTTGCTTGTGCTTGCTGAAAGTTTGCCTTACATTTTGCAATTTCCAGGTCACAATTATATCGGATCTGAGCACTTGCTTTTGGGTCTTCTTAGAGAGGGTGAAGGTGTGGCAGCACGTGTTCTTGAAAATTTGGGTGCTGATCCAACTAATATTCGCACCCAGGCAAGTATTATGTCATCATTTATTCCTTTTATGTATTTTTATTATATAAGAACATGTTTTCATTTCACTTTTTATCTGAATTTATGTTTTTGTGTGTTAATCTTGTACTCCACTTGATGGGAACAGGTTATTCGCATGGTTGGTGAGGGTGCTGATAGTGTTGGGGCTACCGTTGGCTCTGGAAGTAGTAACAATAAGATGCCAACTTTGGAGGAGTATGGCACCAATTTGACCAAGCTAGCAGAGGAGGTAACTTACAATTCCTAGTTTTCTTCATGACAGATGGTAGATAATGTCTCAGTCTGTGTTGTTGCTTACCAATTTTTCTCTTTCGTGATGTCAAAATCACAGGGAAAATTGGATCCTGTTGTGGGTAGGCAGCCACAAATTGAACGTGTCACTCAAATCTTGGGTCGTCGTACCAAAAATAATCCTTGTCTTATTGGGGAACCTGGTGTCGGAAAGACAGCCATTGCTGAAGGCCTTGCTCAACGGATTGCAAATGGTGATGTCCCCGAAACCATAGAGGGAAAGAAGGTTGGTGTTTGTTTCTATCTCTAGCCCATAAATTGTTTTTGATTTTATTCAGGGGGTAAGGGGTTTGCTCTTTCATTTTCAGCACCTTGAACATGTTTAACTTGCTCAATCTTGATCTGATTATAATTCTTAGATGTGGAATTTTAGTACTTTCGGGTGTCCTGAATGACGTGAAAGCCTTGTTCTGCATGATGTAGGTTATAACCCTAGACATGGGTCTACTTGTAGCGGGAACTAAATACCGTGGAGAATTTGAAGAAAGATTGAAAAAACTAATGGAGGAAATCAAACAAAGTGATGAAATAATACTTTTCATTGATGAAGTGCACACTCTAATTGGAGCAGGAGCAGCTGAAGGGGCAATTGATGCGGCAAACATATTGAAGCCAGCTCTTGCTAGAGGTGAACTACAGGTAATGTTTTCTTTTGACATCTCAAAAATGGATACGCTGCACTTTTGACTTGCAGATCAATGAAAATATGTATGCAGAAGTTTCAATAATAAGCTTTTGAATACTTCTATCTATAAAAAAGTGTACACATTTTCACAGTTCATTTTTAATCAATAGTATTAAAAAATTTAAATTCTTAATGATCATTTTGGATTGTCTATGAAATGTAAAGACTGAAGGCATAATTAAAATACTTATGCAGTGTATAGGAGCCACAACTCTAGATGAATATAGGAAGCACATTGAAAAAGATCCAGCTTTGGAGAGGCGATTCCAACCTGTTAAAGTGCCAGAGCCAACTGTTCCTGAAACCATACAAATACTGAAAGGACTTAGAGAGCGCTATGAGATTCACCACAAGCTCCGTTATACTGATGAGGCTCTTGTAGCTGCTGCAGAGCTGTCGCATCAATATATTAGGTTTGTCATAATTTATATTTATGCACATTCTCTGCCCGTTTTCAATTTTAATTTATGATGTGGAAAAGAGAATTTTTTTATAGTTCTGGTATTACATGTTTAAATGGGAATTTTTAAACCGAAGTTAATCATCTGGAATTTAGTATTATGCCTTTGAATTGTTTTACAACATTATTTTGGAACTCTCACGTAGTTGTCTCGCATAGTGCTTGTATGGGAATGAATCAAACTGCACCTTCTTCTATCTTGTTATCTTCTACTTGCTGTTTATCTCAAGTGTTTTCTCGCTCATAAAATAATTATGATTTTTGCAGTGATCGATTTTTGCCTGACAAAGCTATAGATTTGATTGATGAAGCTGGTTCCCGAGTCCGACTTCAACATGCACAGGTATTGTTCATCCACCATTCCCTGAACCAGCAGTTCTTTTCTCGTCTATTATTGAGCTAATTGTGTCAGATTTACATACTTGCAGTTACCTGAAGAGGCAAGAGGTCTTGAAAAGGAAGTTAGGCAGATAGTAAAGGAGAAAGATGAAGCTGTTCGCAACCAAGAGTTTGAAAAGGTAATGCTTTAATTTAAAACTTAACTTGTAAACTTTAACATAACCCCACATTTTTAGGATACTCAACCACCTTTTTTCCAGTGAGATTACATTATATTTTTCAAAGAAGAAAAGTAAGCCACGTAAGGCTGTTTTATCTTTCCTAAAGTTCTATAGCGGGTTTGTTCTCTAGTTTTTGTTTGAAGACATTGTAGTGGTTTGTTCCTTCAATTATATATATCCAAATTCCTTTACATTCTGGGTAATAAATAGTGGGCTGATGATACCTTAATTTCTGAATAGGCTGGAGAGCTAAGGGATAAAGAAATGGATCTCAAGACTCAGATATCAGCACTTATAGAAAAAAACAAGGAGATGAACAAGGCAGAGAGTGAGGCAGGAGATGTAGGTGCACTTGTGACTGAAGTTGACATACAACATATTGTTGCCTCTTGGACTGGTATCCCTGTTGACAAAGTCTCGGTTGACGAATCTGATCGTCTTCTCAAGATGGAAGACACATTACACAAACGCATTATTGGTCAGCATGAAGCAGTAGAAGCCATTAGCAGGGCTATCCGTCGAGCTCGTGTTGGACTTAAGAACCCTAACAGGCCAATCGCCAGCTTCATCTTTTCTGGCCCTACTGGTGTGGGGAAGTCTGAATTGGCTAAGGCATTGGCCTCATACTACTTTGGATCTGAAGAAGCCATGATTCGTCTTGATATGAGTGAATTCATGGAAAGGCACACAGTCTCCAAACTCATTGGTTCACCTCCAGGATATGTTGGTTATACTGAGGGTGGTCAACTGACTGAGGCAGTTCGGCGTCGTCCCTACACGGTTGTACTCTTTGATGAGATTGAGAAAGCCCATCCTGATGTCTTCAACATGATGCTTCAAATCCTAGAAGATGGGAGGCTAACAGATAGTAAGGGAAGAACTGTGGACTTCAAGAACACACTTCTTATAATGACATCAAATGTTGGAAGCAGTGTGATCGAGAAAGGAGGCCGTCGCATAGGATTTGACCTTGACTATGATGAGAAGGACAGCAGTTATAACAGAATCAAGAGCTTGGTGACCGAGGAGCTGAAACAATACTTTAGGCCAGAGTTCTTGAATAGGCTTGATGAAATGATTGTTTTCAGGCAACTCACTAAACTGGAGGTTAAGGAGATAGCGGATATAATGTTGAAGGAGGTGTTCGAGAGACTGAAAACCAAAGAGATTGAACTCTCAGTGACAGAGAGATTTAGGGAGAGAGTGGTCGACGAAGGTTATAATCCTAGTTATGGGGCCAGGCCTCTAAGACGAGCCATAATGCGACTTTTGGAGGACAGCATGGCTGAAAAGATGCTTGCTAGGGAGATTAAAGAGGGCGACTCTGTTATAGTGGATGCTGATTCTGATGGAAACGTGATTGTGCTCAACGGTAGTACTGGTGCTCCAGATTCATTGCCAGATGCTCTTCCTGTGTAA
Protein sequence

>MS.gene030500.t1

MSRVLAQSINVPGLVAGRRHVNNNKGAARSRRSVRMMFTTRTAAPRLSSYSGLRTLNSLDSMFRPGQDFHSKVLTQIGTNRAKGGRGSRCVTKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGEGADSVGATVGSGSSNNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVPETIQILKGLRERYEIHHKLRYTDEALVAAAELSHQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEARGLEKEVRQIVKEKDEAVRNQEFEKAGELRDKEMDLKTQISALIEKNKEMNKAESEAGDVGALVTEVDIQHIVASWTGIPVDKVSVDESDRLLKMEDTLHKRIIGQHEAVEAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKTKEIELSVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDADSDGNVIVLNGSTGAPDSLPDALPV