Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063498.t1 | XP_013458000.1 | 97.4 | 389 | 10 | 0 | 2 | 390 | 3 | 391 | 3.90E-222 | 780.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063498.t1 | Q9C907 | 73.3 | 382 | 101 | 1 | 9 | 389 | 8 | 389 | 3.4e-166 | 585.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063498.t1 | A0A072URQ0 | 97.4 | 389 | 10 | 0 | 2 | 390 | 3 | 391 | 2.8e-222 | 780.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049264 | MS.gene063498 | 0.802624 | 5.14E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene063498 | 0.867929 | 9.53E-66 | -1.69E-46 |
| MS.gene04991 | MS.gene063498 | -0.835064 | 2.09E-56 | -1.69E-46 |
| MS.gene050226 | MS.gene063498 | 0.813092 | 3.05E-51 | -1.69E-46 |
| MS.gene050227 | MS.gene063498 | 0.820831 | 5.57E-53 | -1.69E-46 |
| MS.gene050228 | MS.gene063498 | 0.824706 | 6.98E-54 | -1.69E-46 |
| MS.gene050623 | MS.gene063498 | -0.828353 | 9.43E-55 | -1.69E-46 |
| MS.gene050762 | MS.gene063498 | 0.817336 | 3.48E-52 | -1.69E-46 |
| MS.gene050763 | MS.gene063498 | 0.819234 | 1.29E-52 | -1.69E-46 |
| MS.gene052389 | MS.gene063498 | 0.811047 | 8.51E-51 | -1.69E-46 |
| MS.gene053811 | MS.gene063498 | 0.821944 | 3.08E-53 | -1.69E-46 |
| MS.gene054379 | MS.gene063498 | 0.810317 | 1.22E-50 | -1.69E-46 |
| MS.gene054468 | MS.gene063498 | 0.838231 | 3.25E-57 | -1.69E-46 |
| MS.gene054826 | MS.gene063498 | 0.809277 | 2.05E-50 | -1.69E-46 |
| MS.gene054930 | MS.gene063498 | 0.811211 | 7.84E-51 | -1.69E-46 |
| MS.gene056400 | MS.gene063498 | 0.803786 | 2.95E-49 | -1.69E-46 |
| MS.gene05843 | MS.gene063498 | -0.820685 | 6.02E-53 | -1.69E-46 |
| MS.gene058651 | MS.gene063498 | 0.805178 | 1.51E-49 | -1.69E-46 |
| MS.gene060869 | MS.gene063498 | 0.807311 | 5.38E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063498.t1 | MTR_4g109600 | 97.429 | 389 | 10 | 0 | 2 | 390 | 3 | 391 | 0.0 | 788 |
| MS.gene063498.t1 | MTR_4g109600 | 95.263 | 190 | 9 | 0 | 2 | 191 | 3 | 192 | 1.81e-129 | 375 |
| MS.gene063498.t1 | MTR_4g109600 | 83.974 | 156 | 24 | 1 | 236 | 390 | 163 | 318 | 1.20e-89 | 273 |
| MS.gene063498.t1 | MTR_5g094230 | 28.173 | 323 | 192 | 15 | 44 | 354 | 37 | 331 | 3.98e-18 | 86.7 |
| MS.gene063498.t1 | MTR_5g094230 | 23.620 | 326 | 214 | 10 | 47 | 363 | 358 | 657 | 2.88e-17 | 84.3 |
| MS.gene063498.t1 | MTR_5g094230 | 28.173 | 323 | 192 | 15 | 44 | 354 | 37 | 331 | 5.27e-18 | 86.3 |
| MS.gene063498.t1 | MTR_5g094230 | 23.620 | 326 | 214 | 10 | 47 | 363 | 358 | 657 | 2.40e-17 | 84.3 |
| MS.gene063498.t1 | MTR_2g450160 | 26.220 | 328 | 196 | 12 | 47 | 361 | 516 | 810 | 1.98e-17 | 84.7 |
| MS.gene063498.t1 | MTR_2g450160 | 27.011 | 348 | 206 | 14 | 36 | 360 | 174 | 496 | 1.36e-14 | 76.3 |
| MS.gene063498.t1 | MTR_3g055610 | 26.235 | 324 | 212 | 12 | 37 | 354 | 29 | 331 | 4.22e-16 | 80.5 |
| MS.gene063498.t1 | MTR_3g055610 | 22.186 | 311 | 207 | 9 | 51 | 354 | 362 | 644 | 9.40e-13 | 70.1 |
| MS.gene063498.t1 | MTR_4g131380 | 25.538 | 325 | 203 | 15 | 43 | 360 | 51 | 343 | 9.25e-15 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063498.t1 | AT1G74210 | 72.610 | 387 | 105 | 1 | 4 | 389 | 3 | 389 | 0.0 | 593 |
| MS.gene063498.t1 | AT5G08030 | 76.989 | 352 | 81 | 0 | 16 | 367 | 16 | 367 | 0.0 | 582 |
| MS.gene063498.t1 | AT5G08030 | 76.989 | 352 | 81 | 0 | 16 | 367 | 31 | 382 | 0.0 | 582 |
| MS.gene063498.t1 | AT4G26690 | 22.785 | 316 | 211 | 8 | 47 | 354 | 363 | 653 | 9.65e-18 | 85.9 |
| MS.gene063498.t1 | AT4G26690 | 24.471 | 331 | 192 | 10 | 44 | 354 | 44 | 336 | 5.11e-17 | 83.6 |
| MS.gene063498.t1 | AT1G66970 | 23.734 | 316 | 209 | 9 | 47 | 354 | 369 | 660 | 4.68e-17 | 83.6 |
| MS.gene063498.t1 | AT1G66970 | 27.273 | 330 | 198 | 14 | 37 | 354 | 43 | 342 | 5.94e-16 | 80.1 |
| MS.gene063498.t1 | AT1G66970 | 23.175 | 315 | 212 | 8 | 47 | 354 | 391 | 682 | 5.30e-17 | 83.6 |
| MS.gene063498.t1 | AT1G66970 | 27.245 | 323 | 193 | 14 | 44 | 354 | 72 | 364 | 1.15e-15 | 79.3 |
| MS.gene063498.t1 | AT5G55480 | 20.958 | 334 | 231 | 8 | 47 | 371 | 368 | 677 | 5.89e-17 | 83.2 |
| MS.gene063498.t1 | AT1G66970 | 23.175 | 315 | 212 | 8 | 47 | 354 | 175 | 466 | 6.42e-17 | 82.8 |
| MS.gene063498.t1 | AT3G20520 | 20.988 | 324 | 232 | 7 | 47 | 363 | 340 | 646 | 2.32e-15 | 78.2 |
| MS.gene063498.t1 | AT1G66980 | 24.051 | 316 | 207 | 9 | 47 | 354 | 372 | 662 | 5.29e-14 | 74.3 |
| MS.gene063498.t1 | AT1G66980 | 24.051 | 316 | 207 | 9 | 47 | 354 | 372 | 662 | 5.75e-14 | 74.3 |
| MS.gene063498.t1 | AT1G66980 | 24.051 | 316 | 207 | 9 | 47 | 354 | 401 | 691 | 6.28e-14 | 74.3 |
| MS.gene063498.t1 | AT1G66980 | 24.051 | 316 | 207 | 9 | 47 | 354 | 355 | 645 | 6.61e-14 | 73.9 |
Find 85 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCCTATGTGCAACGTTATA+TGG | 0.136452 | 8.4:-18030332 | None:intergenic |
| TGCAGTTGATTTCACATTAA+AGG | 0.140506 | 8.4:+18031416 | MS.gene063498:intron |
| TGAATCAGAGGTTCAGCTTT+AGG | 0.246627 | 8.4:+18031457 | MS.gene063498:CDS |
| GTTGAAACACTTCGGAAATA+TGG | 0.255128 | 8.4:+18032525 | MS.gene063498:CDS |
| TGATTACTGGATCAACAAAA+TGG | 0.274727 | 8.4:+18033493 | MS.gene063498:CDS |
| AAGCAATATGTTGTAGGAAT+TGG | 0.302113 | 8.4:+18032927 | MS.gene063498:CDS |
| TATCTCAATGTCTTCGTTAT+CGG | 0.318763 | 8.4:+18029506 | None:intergenic |
| ACATATAAGAACACCATCTT+TGG | 0.329743 | 8.4:-18030811 | None:intergenic |
| GAATCAGAGGTTCAGCTTTA+GGG | 0.347631 | 8.4:+18031458 | MS.gene063498:CDS |
| AGAAACTCGCGAGGCATATC+TGG | 0.353981 | 8.4:+18030376 | MS.gene063498:CDS |
| TATGCCTCGCGAGTTTCTTC+AGG | 0.363128 | 8.4:-18030371 | None:intergenic |
| TCTTGTCATCTTGACGGTTA+GGG | 0.364460 | 8.4:-18033577 | None:intergenic |
| ATCTCAATGTCTTCGTTATC+GGG | 0.369178 | 8.4:+18029507 | None:intergenic |
| GTCTTGTCATCTTGACGGTT+AGG | 0.371938 | 8.4:-18033578 | None:intergenic |
| TTCTCATTTCTGTACGTGTA+TGG | 0.378212 | 8.4:-18033425 | None:intergenic |
| CTTACAAGGAGTATGATTAC+TGG | 0.378731 | 8.4:+18033480 | MS.gene063498:CDS |
| ATGATTATGTGCAGTCATAT+TGG | 0.381861 | 8.4:+18032871 | MS.gene063498:intron |
| AGGCCTTTGTATCCACTTCC+TGG | 0.386639 | 8.4:+18030266 | MS.gene063498:CDS |
| CCCATATAACGTTGCACATA+GGG | 0.394571 | 8.4:+18030331 | MS.gene063498:CDS |
| CTCCTTCGGATCTTGTTGCC+AGG | 0.400869 | 8.4:+18032997 | MS.gene063498:CDS |
| GATATATACACAAGTGAAGT+TGG | 0.401531 | 8.4:-18032612 | None:intergenic |
| TGATTATGTGCAGTCATATT+GGG | 0.403241 | 8.4:+18032872 | MS.gene063498:intron |
| ATCAACAAAATGGGAATTGA+TGG | 0.404261 | 8.4:+18033503 | MS.gene063498:CDS |
| GATATAAATAACAGGTGAAA+TGG | 0.409069 | 8.4:+18032472 | MS.gene063498:intron |
| TTGGATGCACCCAGAGTTGT+TGG | 0.424638 | 8.4:+18031951 | MS.gene063498:CDS |
| CCCTATGTGCAACGTTATAT+GGG | 0.427804 | 8.4:-18030331 | None:intergenic |
| TACATAAAGCAATATGTTGT+AGG | 0.433660 | 8.4:+18032921 | MS.gene063498:CDS |
| TTTAGGGATCAACAGTTTAA+CGG | 0.437378 | 8.4:+18031474 | MS.gene063498:CDS |
| GTTGCACATAGGGGCTCAAA+TGG | 0.451850 | 8.4:+18030341 | MS.gene063498:CDS |
| TACCAGTGAAATCTGTAAAC+AGG | 0.454717 | 8.4:-18033526 | None:intergenic |
| AGGATATATTCCAACAACTC+TGG | 0.460634 | 8.4:-18031961 | None:intergenic |
| CAGTAATCATACTCCTTGTA+AGG | 0.464985 | 8.4:-18033479 | None:intergenic |
| CTTCCATGGTCACCTTTGCC+AGG | 0.470270 | 8.4:-18030284 | None:intergenic |
| GAAGAGGCTGCTTACTTCCA+TGG | 0.474342 | 8.4:-18030298 | None:intergenic |
| ATGCAGTCTTGTCATCTTGA+CGG | 0.475282 | 8.4:-18033583 | None:intergenic |
| CATATTGCTTTATGTAGTCT+AGG | 0.476260 | 8.4:-18032914 | None:intergenic |
| GTCGGACGGCAAACGATTTG+AGG | 0.480583 | 8.4:+18032494 | MS.gene063498:CDS |
| AGAGTTCATTACCATAGCAT+TGG | 0.485013 | 8.4:+18031932 | MS.gene063498:CDS |
| TGGTCACCTTTGCCAGGAAG+TGG | 0.486182 | 8.4:-18030278 | None:intergenic |
| GATTACTGGATCAACAAAAT+GGG | 0.486674 | 8.4:+18033494 | MS.gene063498:CDS |
| GTTGAAGGGGTCATTACCAC+TGG | 0.486833 | 8.4:+18030912 | MS.gene063498:CDS |
| ACATGCTGATTGATAAGTAC+TGG | 0.490440 | 8.4:-18031996 | None:intergenic |
| AAAAGAACATATGAAGTTGA+AGG | 0.491237 | 8.4:+18030897 | MS.gene063498:CDS |
| TTCAACACAAGACACTAATC+AGG | 0.497899 | 8.4:+18032683 | MS.gene063498:CDS |
| ACGGCAAACGATTTGAGGAC+AGG | 0.499996 | 8.4:+18032499 | MS.gene063498:CDS |
| GATATATTATCTTCCAAAGA+TGG | 0.509816 | 8.4:+18030798 | MS.gene063498:CDS |
| TGTGTATATATCAAATCAAA+CGG | 0.510034 | 8.4:+18032623 | MS.gene063498:CDS |
| CAACTATGTGATGACTCCTT+CGG | 0.513161 | 8.4:+18032983 | MS.gene063498:CDS |
| GGATATATTCCAACAACTCT+GGG | 0.526903 | 8.4:-18031960 | None:intergenic |
| ACTTCGGAAATATGGATACA+AGG | 0.529530 | 8.4:+18032533 | MS.gene063498:CDS |
| TCCTTCGGATCTTGTTGCCA+GGG | 0.530863 | 8.4:+18032998 | MS.gene063498:CDS |
| TGTAGGAATTGGACCTTGGA+AGG | 0.532490 | 8.4:+18032938 | MS.gene063498:CDS |
| AAAGAACATATGAAGTTGAA+GGG | 0.534240 | 8.4:+18030898 | MS.gene063498:CDS |
| CTTTAGTCAAGATCCTTACA+AGG | 0.536799 | 8.4:+18033466 | MS.gene063498:CDS |
| CTTGTCATCTTGACGGTTAG+GGG | 0.536985 | 8.4:-18033576 | None:intergenic |
| GCCCATATAACGTTGCACAT+AGG | 0.541427 | 8.4:+18030330 | MS.gene063498:CDS |
| TTGTATCCACTTCCTGGCAA+AGG | 0.547465 | 8.4:+18030272 | MS.gene063498:CDS |
| GTTCATACCTGTCAAAACAT+TGG | 0.548979 | 8.4:+18032556 | MS.gene063498:CDS |
| GGCACATGCTCATAATCTGC+AGG | 0.551055 | 8.4:+18033019 | MS.gene063498:CDS |
| GCAAAGGACTGTATAAATGC+AGG | 0.557159 | 8.4:-18032588 | None:intergenic |
| TTGCAGAGAGCTATTGAGGA+AGG | 0.565109 | 8.4:+18030756 | MS.gene063498:intron |
| CACAAGTGAAGTTGGAGCAA+AGG | 0.568154 | 8.4:-18032604 | None:intergenic |
| TAAATAACAGGTGAAATGGT+CGG | 0.572543 | 8.4:+18032476 | MS.gene063498:intron |
| TCTGGGTGCATCCAATGCTA+TGG | 0.574074 | 8.4:-18031943 | None:intergenic |
| ACAGGTTTGTTGAAACACTT+CGG | 0.580004 | 8.4:+18032517 | MS.gene063498:CDS |
| CAGATTATGAGCATGTGCCC+TGG | 0.581110 | 8.4:-18033015 | None:intergenic |
| CTTCCTGGCAAAGGTGACCA+TGG | 0.581158 | 8.4:+18030281 | MS.gene063498:CDS |
| ATCACATAGTTGTTAACCAC+AGG | 0.582933 | 8.4:-18032972 | None:intergenic |
| GGCCTGTTTACAGATTTCAC+TGG | 0.586096 | 8.4:+18033524 | MS.gene063498:CDS |
| ATGTTGTAGGAATTGGACCT+TGG | 0.610872 | 8.4:+18032934 | MS.gene063498:CDS |
| TATGGGCGAAAAGTTTGAAG+AGG | 0.612743 | 8.4:-18030314 | None:intergenic |
| AGTCGCTGAGGGTGAATCAG+AGG | 0.615291 | 8.4:+18031445 | MS.gene063498:CDS |
| AAAGGAATTAAAGTCGCTGA+GGG | 0.619575 | 8.4:+18031434 | MS.gene063498:CDS |
| TAAAGGAATTAAAGTCGCTG+AGG | 0.621868 | 8.4:+18031433 | MS.gene063498:CDS |
| CCATATAACGTTGCACATAG+GGG | 0.625643 | 8.4:+18030332 | MS.gene063498:CDS |
| TTTCTATTGCTCGTGATTGG+GGG | 0.629901 | 8.4:+18030236 | MS.gene063498:CDS |
| CTTCGGAAATATGGATACAA+GGG | 0.630595 | 8.4:+18032534 | MS.gene063498:CDS |
| AAGAACATATGAAGTTGAAG+GGG | 0.634583 | 8.4:+18030899 | MS.gene063498:CDS |
| GAAGGATACTATAGTACCTG+TGG | 0.635202 | 8.4:+18032956 | MS.gene063498:CDS |
| GGTACTATAGTATCCTTCCA+AGG | 0.636568 | 8.4:-18032951 | None:intergenic |
| TAACAGGTGAAATGGTCGGA+CGG | 0.639574 | 8.4:+18032480 | MS.gene063498:intron |
| GCCCTGGCAACAAGATCCGA+AGG | 0.642209 | 8.4:-18032999 | None:intergenic |
| TTGCCAGGAAGTGGATACAA+AGG | 0.653361 | 8.4:-18030269 | None:intergenic |
| ACTTCCTGAAGAAACTCGCG+AGG | 0.669064 | 8.4:+18030367 | MS.gene063498:CDS |
| TATTATCAAGAGTAACGTCG+TGG | 0.673707 | 8.4:-18030836 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAATTGATATAAATAAC+AGG | + | chr8.4:18032464-18032483 | MS.gene063498:intron | 10.0% |
| !!! | AAAAAACAAATATCATTTTT+AGG | - | chr8.4:18030738-18030757 | None:intergenic | 10.0% |
| !! | CATAAAACTATTATTTACTT+TGG | + | chr8.4:18031833-18031852 | MS.gene063498:intron | 15.0% |
| !!! | TAAAAAAAACACAATTTTAG+CGG | - | chr8.4:18029684-18029703 | None:intergenic | 15.0% |
| !! | AATGGTAACTCAATAAATTA+AGG | - | chr8.4:18031202-18031221 | None:intergenic | 20.0% |
| !! | ATATAGATAGATAGATTAAG+TGG | + | chr8.4:18029713-18029732 | MS.gene063498:intron | 20.0% |
| !! | ATTTCCTTCGTAAAATATAT+TGG | + | chr8.4:18030981-18031000 | MS.gene063498:intron | 20.0% |
| !! | CAACATTGTATAACATTAAA+AGG | - | chr8.4:18032797-18032816 | None:intergenic | 20.0% |
| !! | TAGTTAGTTAGTATGAAAAT+GGG | + | chr8.4:18030099-18030118 | MS.gene063498:intron | 20.0% |
| !! | TGTGTATATATCAAATCAAA+CGG | + | chr8.4:18032623-18032642 | MS.gene063498:CDS | 20.0% |
| !! | TTAGGATAATGATTATTGTA+CGG | + | chr8.4:18032265-18032284 | MS.gene063498:intron | 20.0% |
| !! | TTAGTTAGTTAGTATGAAAA+TGG | + | chr8.4:18030098-18030117 | MS.gene063498:intron | 20.0% |
| !! | TTTCCTTCGTAAAATATATT+GGG | + | chr8.4:18030982-18031001 | MS.gene063498:intron | 20.0% |
| !!! | AGACGTATTTCTTAATTTTA+GGG | + | chr8.4:18031233-18031252 | MS.gene063498:intron | 20.0% |
| !!! | ATGCATTTTGAAATGAAAAT+TGG | - | chr8.4:18029750-18029769 | None:intergenic | 20.0% |
| !!! | ATTAATTGTGAACTATTTTG+TGG | + | chr8.4:18031573-18031592 | MS.gene063498:intron | 20.0% |
| !!! | CATGATATGTTTTATAATCA+AGG | + | chr8.4:18032216-18032235 | MS.gene063498:intron | 20.0% |
| !!! | GTGAGATTATGTTATATTTT+TGG | + | chr8.4:18032288-18032307 | MS.gene063498:intron | 20.0% |
| !!! | TAGACGTATTTCTTAATTTT+AGG | + | chr8.4:18031232-18031251 | MS.gene063498:intron | 20.0% |
| !!! | TCATCGATTAAAAAAATCTT+AGG | - | chr8.4:18032654-18032673 | None:intergenic | 20.0% |
| !!! | TGAACCATTTTAAAATCTAA+TGG | - | chr8.4:18031756-18031775 | None:intergenic | 20.0% |
| !!! | TGCATTTTGAAATGAAAATT+GGG | - | chr8.4:18029749-18029768 | None:intergenic | 20.0% |
| ! | AAAAGAACATATGAAGTTGA+AGG | + | chr8.4:18030897-18030916 | MS.gene063498:CDS | 25.0% |
| ! | AAAGAACATATGAAGTTGAA+GGG | + | chr8.4:18030898-18030917 | MS.gene063498:CDS | 25.0% |
| ! | AAAGAATGGAATATTGTTTC+TGG | - | chr8.4:18031330-18031349 | None:intergenic | 25.0% |
| ! | AATTGAAAATTGAAGCAAGT+TGG | - | chr8.4:18029606-18029625 | None:intergenic | 25.0% |
| ! | ATCAATTTGTAGAAGATCAA+GGG | - | chr8.4:18032736-18032755 | None:intergenic | 25.0% |
| ! | ATCTTATTGTATGAATGTGA+TGG | + | chr8.4:18032107-18032126 | MS.gene063498:intron | 25.0% |
| ! | ATGAAAAGAGAAACATTTGA+AGG | - | chr8.4:18029875-18029894 | None:intergenic | 25.0% |
| ! | ATGATTAAGTTATGCAAGAA+TGG | + | chr8.4:18029822-18029841 | MS.gene063498:intron | 25.0% |
| ! | ATTCATACAATAAGATTGGA+GGG | - | chr8.4:18032103-18032122 | None:intergenic | 25.0% |
| ! | CACTCTAGATAACAAATTAA+AGG | - | chr8.4:18033177-18033196 | None:intergenic | 25.0% |
| ! | CATAACAATTCAAAGAAATG+AGG | - | chr8.4:18031552-18031571 | None:intergenic | 25.0% |
| ! | CTAGATAACAAATTAAAGGT+GGG | - | chr8.4:18033173-18033192 | None:intergenic | 25.0% |
| ! | GATATAAATAACAGGTGAAA+TGG | + | chr8.4:18032472-18032491 | MS.gene063498:intron | 25.0% |
| ! | GATATATTATCTTCCAAAGA+TGG | + | chr8.4:18030798-18030817 | MS.gene063498:CDS | 25.0% |
| ! | GTGAAAAATAAATGAAGACA+AGG | - | chr8.4:18030001-18030020 | None:intergenic | 25.0% |
| ! | TAAAGTTGAAATGCAAAAAC+TGG | - | chr8.4:18033451-18033470 | None:intergenic | 25.0% |
| ! | TAATCATATGAAGAGAAACA+AGG | - | chr8.4:18033063-18033082 | None:intergenic | 25.0% |
| ! | TACATAAAGCAATATGTTGT+AGG | + | chr8.4:18032921-18032940 | MS.gene063498:CDS | 25.0% |
| ! | TAGGATAATGATTATTGTAC+GGG | + | chr8.4:18032266-18032285 | MS.gene063498:intron | 25.0% |
| ! | TCACATTCATACAATAAGAT+TGG | - | chr8.4:18032107-18032126 | None:intergenic | 25.0% |
| ! | TCTAGATAACAAATTAAAGG+TGG | - | chr8.4:18033174-18033193 | None:intergenic | 25.0% |
| ! | TGACAAATCATAAATGTAAC+AGG | + | chr8.4:18030197-18030216 | MS.gene063498:intron | 25.0% |
| ! | TTGAGAATAAGATGAAGTAA+AGG | + | chr8.4:18031672-18031691 | MS.gene063498:intron | 25.0% |
| !! | AGCAATTTTATGTAATAGCT+CGG | - | chr8.4:18033609-18033628 | None:intergenic | 25.0% |
| !! | CATTACAGTACTATTTTGTT+AGG | - | chr8.4:18032854-18032873 | None:intergenic | 25.0% |
| !! | CTTGCTTCAATTTTCAATTT+TGG | + | chr8.4:18029607-18029626 | MS.gene063498:intron | 25.0% |
| !! | GTGTCATAAATGAATGTTTT+TGG | + | chr8.4:18033356-18033375 | MS.gene063498:intron | 25.0% |
| !! | TTTATTAGCCTCTGTATAAA+TGG | + | chr8.4:18029563-18029582 | MS.gene063498:intron | 25.0% |
| !!! | AAGACGTTTTATTTCTCAAT+AGG | + | chr8.4:18031260-18031279 | MS.gene063498:intron | 25.0% |
| !!! | AGCTCCATTAGATTTTAAAA+TGG | + | chr8.4:18031749-18031768 | MS.gene063498:intron | 25.0% |
| !!! | TCTGCTTTTATCACTAATTT+GGG | + | chr8.4:18029945-18029964 | MS.gene063498:intron | 25.0% |
| !!! | TGACAGATTTTAATAAGAAC+TGG | + | chr8.4:18031641-18031660 | MS.gene063498:intron | 25.0% |
| !!! | TTCTGCTTTTATCACTAATT+TGG | + | chr8.4:18029944-18029963 | MS.gene063498:intron | 25.0% |
| AAAAACAAGTAATCAGCAGA+CGG | - | chr8.4:18031798-18031817 | None:intergenic | 30.0% | |
| AAAAGCTACTATGAGTAGAA+AGG | - | chr8.4:18031506-18031525 | None:intergenic | 30.0% | |
| AAAGCTACTATGAGTAGAAA+GGG | - | chr8.4:18031505-18031524 | None:intergenic | 30.0% | |
| AAGAACATATGAAGTTGAAG+GGG | + | chr8.4:18030899-18030918 | MS.gene063498:CDS | 30.0% | |
| AAGCAATATGTTGTAGGAAT+TGG | + | chr8.4:18032927-18032946 | MS.gene063498:CDS | 30.0% | |
| ACAATGATCCATTTATACAG+AGG | - | chr8.4:18029574-18029593 | None:intergenic | 30.0% | |
| ACACATATCTAATCCAGTTA+GGG | - | chr8.4:18029902-18029921 | None:intergenic | 30.0% | |
| ACATATAAGAACACCATCTT+TGG | - | chr8.4:18030814-18030833 | None:intergenic | 30.0% | |
| ACGAGCAATAGAAAAACAAA+AGG | - | chr8.4:18030230-18030249 | None:intergenic | 30.0% | |
| AGAATAAGATGAAGTAAAGG+TGG | + | chr8.4:18031675-18031694 | MS.gene063498:intron | 30.0% | |
| ATATTGAGCTAATCAGTGTA+TGG | - | chr8.4:18030550-18030569 | None:intergenic | 30.0% | |
| ATGATTATGTGCAGTCATAT+TGG | + | chr8.4:18032871-18032890 | MS.gene063498:intron | 30.0% | |
| ATTATGCACAACCTAGTATT+TGG | + | chr8.4:18030657-18030676 | MS.gene063498:intron | 30.0% | |
| CACATGTATAAGAGAAGAAA+AGG | - | chr8.4:18031725-18031744 | None:intergenic | 30.0% | |
| CAGATGTAAAGTAATGAGAA+AGG | - | chr8.4:18030436-18030455 | None:intergenic | 30.0% | |
| CATATGCACAATAAAAATGC+TGG | - | chr8.4:18032196-18032215 | None:intergenic | 30.0% | |
| CATATTGCTTTATGTAGTCT+AGG | - | chr8.4:18032917-18032936 | None:intergenic | 30.0% | |
| CATCAATTTGTAGAAGATCA+AGG | - | chr8.4:18032737-18032756 | None:intergenic | 30.0% | |
| CATTCATACAATAAGATTGG+AGG | - | chr8.4:18032104-18032123 | None:intergenic | 30.0% | |
| CTTGAAAGTGATGAAAAAAC+TGG | - | chr8.4:18031356-18031375 | None:intergenic | 30.0% | |
| GAAAAAACTGGATGAAAGAA+TGG | - | chr8.4:18031344-18031363 | None:intergenic | 30.0% | |
| GATATATACACAAGTGAAGT+TGG | - | chr8.4:18032615-18032634 | None:intergenic | 30.0% | |
| TAAATAACAGGTGAAATGGT+CGG | + | chr8.4:18032476-18032495 | MS.gene063498:intron | 30.0% | |
| TAAGTCTATTGCCTTATCTT+TGG | + | chr8.4:18031872-18031891 | MS.gene063498:intron | 30.0% | |
| TACGTCTATACAAAGCAAAA+TGG | - | chr8.4:18031220-18031239 | None:intergenic | 30.0% | |
| TAGTTAGTATGAAAATGGGT+TGG | + | chr8.4:18030103-18030122 | MS.gene063498:intron | 30.0% | |
| TATTGTATGAATGTGATGGT+TGG | + | chr8.4:18032111-18032130 | MS.gene063498:intron | 30.0% | |
| TGAAAGAGATTCCAAAGATA+AGG | - | chr8.4:18031886-18031905 | None:intergenic | 30.0% | |
| TGATTATGTGCAGTCATATT+GGG | + | chr8.4:18032872-18032891 | MS.gene063498:intron | 30.0% | |
| TGTTGGAATGTTTATTCCAA+AGG | + | chr8.4:18032357-18032376 | MS.gene063498:intron | 30.0% | |
| TTTAGGGATCAACAGTTTAA+CGG | + | chr8.4:18031474-18031493 | MS.gene063498:CDS | 30.0% | |
| ! | AGCATGAAATTTAAGACCTT+TGG | - | chr8.4:18032376-18032395 | None:intergenic | 30.0% |
| ! | AGTACTATTTTGTTAGGCTT+TGG | - | chr8.4:18032848-18032867 | None:intergenic | 30.0% |
| ! | AGTTAGTATGAAAATGGGTT+GGG | + | chr8.4:18030104-18030123 | MS.gene063498:intron | 30.0% |
| ! | ATGAGTTTAGAAGTACAAAG+TGG | - | chr8.4:18031599-18031618 | None:intergenic | 30.0% |
| ! | GTGAGTAATGTATTTTACCT+TGG | + | chr8.4:18032705-18032724 | MS.gene063498:intron | 30.0% |
| ! | TGCAGTTGATTTCACATTAA+AGG | + | chr8.4:18031416-18031435 | MS.gene063498:intron | 30.0% |
| ! | TGGTAGTCTTCATAATTTTC+AGG | + | chr8.4:18033544-18033563 | MS.gene063498:CDS | 30.0% |
| ! | TTTGGAATAAACATTCCAAC+AGG | - | chr8.4:18032358-18032377 | None:intergenic | 30.0% |
| ! | TTTTTCTATTGCTCGTGATT+GGG | + | chr8.4:18030234-18030253 | MS.gene063498:CDS | 30.0% |
| !! | ATTGACGTCATTTTCAACTT+TGG | + | chr8.4:18030698-18030717 | MS.gene063498:intron | 30.0% |
| !! | GGTTCAATGATCATTTTTAC+TGG | + | chr8.4:18031770-18031789 | MS.gene063498:intron | 30.0% |
| !! | GTCTTCATAATTTTCAGGAA+TGG | + | chr8.4:18033549-18033568 | MS.gene063498:CDS | 30.0% |
| !! | TCCATGAGTTGATATTGTAA+CGG | + | chr8.4:18032155-18032174 | MS.gene063498:intron | 30.0% |
| !! | TGACTGTTGATTCAAATTGT+AGG | + | chr8.4:18029640-18029659 | MS.gene063498:intron | 30.0% |
| !! | TGTCACTTTAGCTTAAGTTT+AGG | + | chr8.4:18032247-18032266 | MS.gene063498:intron | 30.0% |
| !! | TGTGGTGTCAATAGTTTTTA+AGG | + | chr8.4:18030489-18030508 | MS.gene063498:intron | 30.0% |
| !! | TTATCTTTGGAATCTCTTTC+AGG | + | chr8.4:18031885-18031904 | MS.gene063498:intron | 30.0% |
| !!! | AGTACTGGATTTTTTATCTC+AGG | - | chr8.4:18031984-18032003 | None:intergenic | 30.0% |
| !!! | ATTACCACTGGATTTTTTGT+CGG | + | chr8.4:18030924-18030943 | MS.gene063498:CDS | 30.0% |
| AAAGGAATTAAAGTCGCTGA+GGG | + | chr8.4:18031434-18031453 | MS.gene063498:CDS | 35.0% | |
| AATCCTCTCTTAGTACAATC+CGG | - | chr8.4:18032328-18032347 | None:intergenic | 35.0% | |
| AATGAAAATTGGGTTTCCCT+TGG | - | chr8.4:18029739-18029758 | None:intergenic | 35.0% | |
| ACTTCGGAAATATGGATACA+AGG | + | chr8.4:18032533-18032552 | MS.gene063498:CDS | 35.0% | |
| AGAGTTCATTACCATAGCAT+TGG | + | chr8.4:18031932-18031951 | MS.gene063498:CDS | 35.0% | |
| AGCATGAGATGATATACCAA+TGG | - | chr8.4:18029925-18029944 | None:intergenic | 35.0% | |
| AGGATATATTCCAACAACTC+TGG | - | chr8.4:18031964-18031983 | None:intergenic | 35.0% | |
| AGTGCAGTGATATGTCATAA+CGG | + | chr8.4:18033193-18033212 | MS.gene063498:intron | 35.0% | |
| ATAGATAGATTAAGTGGCCA+AGG | + | chr8.4:18029719-18029738 | MS.gene063498:intron | 35.0% | |
| ATCACATAGTTGTTAACCAC+AGG | - | chr8.4:18032975-18032994 | None:intergenic | 35.0% | |
| ATCCAATAAACTTCTGTCTG+TGG | + | chr8.4:18032036-18032055 | MS.gene063498:intron | 35.0% | |
| ATGAGCTAACTTTCCAGAAT+AGG | - | chr8.4:18031083-18031102 | None:intergenic | 35.0% | |
| CAGTAATCATACTCCTTGTA+AGG | - | chr8.4:18033482-18033501 | None:intergenic | 35.0% | |
| CAGTTAGAGTTACTGATGAT+CGG | - | chr8.4:18030059-18030078 | None:intergenic | 35.0% | |
| CCAATCTTCAAAAGATTGTG+TGG | + | chr8.4:18033093-18033112 | MS.gene063498:intron | 35.0% | |
| CCTTCGTAAAATATATTGGG+AGG | + | chr8.4:18030985-18031004 | MS.gene063498:intron | 35.0% | |
| CTTCGGAAATATGGATACAA+GGG | + | chr8.4:18032534-18032553 | MS.gene063498:CDS | 35.0% | |
| CTTGGGCATCTTAACAAATT+TGG | + | chr8.4:18031135-18031154 | MS.gene063498:intron | 35.0% | |
| CTTTAGTCAAGATCCTTACA+AGG | + | chr8.4:18033466-18033485 | MS.gene063498:CDS | 35.0% | |
| GACACATATCTAATCCAGTT+AGG | - | chr8.4:18029903-18029922 | None:intergenic | 35.0% | |
| GGATATATTCCAACAACTCT+GGG | - | chr8.4:18031963-18031982 | None:intergenic | 35.0% | |
| GTTCATACCTGTCAAAACAT+TGG | + | chr8.4:18032556-18032575 | MS.gene063498:CDS | 35.0% | |
| GTTGAAACACTTCGGAAATA+TGG | + | chr8.4:18032525-18032544 | MS.gene063498:CDS | 35.0% | |
| TAAAGGAATTAAAGTCGCTG+AGG | + | chr8.4:18031433-18031452 | MS.gene063498:CDS | 35.0% | |
| TACCAGTGAAATCTGTAAAC+AGG | - | chr8.4:18033529-18033548 | None:intergenic | 35.0% | |
| TAGACTTAGCCATTTCAATG+CGG | - | chr8.4:18031860-18031879 | None:intergenic | 35.0% | |
| TAGATAGATTAAGTGGCCAA+GGG | + | chr8.4:18029720-18029739 | MS.gene063498:intron | 35.0% | |
| TATTATCAAGAGTAACGTCG+TGG | - | chr8.4:18030839-18030858 | None:intergenic | 35.0% | |
| TCCGTTACAATATCAACTCA+TGG | - | chr8.4:18032159-18032178 | None:intergenic | 35.0% | |
| TTCAACACAAGACACTAATC+AGG | + | chr8.4:18032683-18032702 | MS.gene063498:CDS | 35.0% | |
| TTCTCATTTCTGTACGTGTA+TGG | - | chr8.4:18033428-18033447 | None:intergenic | 35.0% | |
| TTGTGCTAAATGGCATATCA+CGG | - | chr8.4:18033242-18033261 | None:intergenic | 35.0% | |
| TTTGGAAGTTTCGAAAGATC+CGG | + | chr8.4:18032306-18032325 | MS.gene063498:intron | 35.0% | |
| ! | ACATGCTGATTGATAAGTAC+TGG | - | chr8.4:18031999-18032018 | None:intergenic | 35.0% |
| ! | ACTTTTATTGAACGTCCTCT+TGG | + | chr8.4:18031117-18031136 | MS.gene063498:intron | 35.0% |
| ! | AGAAACATTTGAAGGCATGA+AGG | - | chr8.4:18029867-18029886 | None:intergenic | 35.0% |
| ! | AGAGGATTTTTATCACCTGT+TGG | + | chr8.4:18032340-18032359 | MS.gene063498:intron | 35.0% |
| ! | ATGATTTGTCACACCAAGTT+GGG | - | chr8.4:18030188-18030207 | None:intergenic | 35.0% |
| ! | ATTTTGCCAGAAGAGTTATG+TGG | - | chr8.4:18030407-18030426 | None:intergenic | 35.0% |
| ! | CCTCCCAATATATTTTACGA+AGG | - | chr8.4:18030988-18031007 | None:intergenic | 35.0% |
| ! | CTTACAAGGAGTATGATTAC+TGG | + | chr8.4:18033480-18033499 | MS.gene063498:CDS | 35.0% |
| ! | CTTTTAGTCCATTTCCTTAG+AGG | + | chr8.4:18032424-18032443 | MS.gene063498:intron | 35.0% |
| ! | CTTTTATTGAACGTCCTCTT+GGG | + | chr8.4:18031118-18031137 | MS.gene063498:intron | 35.0% |
| ! | GTTTTTCTATTGCTCGTGAT+TGG | + | chr8.4:18030233-18030252 | MS.gene063498:CDS | 35.0% |
| ! | TAACTCTAACTGGCTTATCA+GGG | + | chr8.4:18030067-18030086 | MS.gene063498:intron | 35.0% |
| ! | TATGATTTGTCACACCAAGT+TGG | - | chr8.4:18030189-18030208 | None:intergenic | 35.0% |
| ! | TCTTTTCATGAATCCCTAAC+TGG | + | chr8.4:18029886-18029905 | MS.gene063498:intron | 35.0% |
| ! | TGGATTAGATATGTGTCCAT+TGG | + | chr8.4:18029906-18029925 | MS.gene063498:intron | 35.0% |
| ! | TTTTCTATTGCTCGTGATTG+GGG | + | chr8.4:18030235-18030254 | MS.gene063498:CDS | 35.0% |
| !! | AATTTGTTAAGATGCCCAAG+AGG | - | chr8.4:18031135-18031154 | None:intergenic | 35.0% |
| !! | ACAGGTTTGTTGAAACACTT+CGG | + | chr8.4:18032517-18032536 | MS.gene063498:CDS | 35.0% |
| !! | ATGATTGTTGATGATGATGC+AGG | + | chr8.4:18033397-18033416 | MS.gene063498:intron | 35.0% |
| !! | ATTTCTAGTGACACCTATTC+TGG | + | chr8.4:18031067-18031086 | MS.gene063498:intron | 35.0% |
| !! | CCACACAATCTTTTGAAGAT+TGG | - | chr8.4:18033096-18033115 | None:intergenic | 35.0% |
| !! | GAAAATTGAAGCAAGTTGGT+TGG | - | chr8.4:18029602-18029621 | None:intergenic | 35.0% |
| !!! | AATAGTTTTTAAGGTGCCCA+TGG | + | chr8.4:18030498-18030517 | MS.gene063498:intron | 35.0% |
| !!! | GTTTCAACCAATGTTTTGAC+AGG | - | chr8.4:18032566-18032585 | None:intergenic | 35.0% |
| !!! | TTTTTTGCAGAGAGCTATTG+AGG | + | chr8.4:18030752-18030771 | MS.gene063498:intron | 35.0% |
| AGACTTAGCCATTTCAATGC+GGG | - | chr8.4:18031859-18031878 | None:intergenic | 40.0% | |
| AGGTGGAAATATCCTTGACA+AGG | + | chr8.4:18031692-18031711 | MS.gene063498:intron | 40.0% | |
| ATGTTGTAGGAATTGGACCT+TGG | + | chr8.4:18032934-18032953 | MS.gene063498:CDS | 40.0% | |
| CAACTATGTGATGACTCCTT+CGG | + | chr8.4:18032983-18033002 | MS.gene063498:CDS | 40.0% | |
| CAGCTAAATATCTCCCAACT+TGG | + | chr8.4:18030172-18030191 | MS.gene063498:intron | 40.0% | |
| CCATATAACGTTGCACATAG+GGG | + | chr8.4:18030332-18030351 | MS.gene063498:CDS | 40.0% | |
| CCCATATAACGTTGCACATA+GGG | + | chr8.4:18030331-18030350 | MS.gene063498:CDS | 40.0% | |
| CCCTATGTGCAACGTTATAT+GGG | - | chr8.4:18030334-18030353 | None:intergenic | 40.0% | |
| CGATCATCAGTAACTCTAAC+TGG | + | chr8.4:18030057-18030076 | MS.gene063498:intron | 40.0% | |
| GAAGGATACTATAGTACCTG+TGG | + | chr8.4:18032956-18032975 | MS.gene063498:CDS | 40.0% | |
| GAATCAGAGGTTCAGCTTTA+GGG | + | chr8.4:18031458-18031477 | MS.gene063498:CDS | 40.0% | |
| GCAAAGGACTGTATAAATGC+AGG | - | chr8.4:18032591-18032610 | None:intergenic | 40.0% | |
| GCTAATCAGTGTATGGTCAA+TGG | - | chr8.4:18030543-18030562 | None:intergenic | 40.0% | |
| GGTACTATAGTATCCTTCCA+AGG | - | chr8.4:18032954-18032973 | None:intergenic | 40.0% | |
| GGTTGTGCATAATTGTAGCA+TGG | - | chr8.4:18030650-18030669 | None:intergenic | 40.0% | |
| GTGAATCCACATAACTCTTC+TGG | + | chr8.4:18030398-18030417 | MS.gene063498:intron | 40.0% | |
| TAGCATCCGCTTATGAATGA+TGG | + | chr8.4:18033633-18033652 | MS.gene063498:CDS | 40.0% | |
| TATGGGCGAAAAGTTTGAAG+AGG | - | chr8.4:18030317-18030336 | None:intergenic | 40.0% | |
| TATTGGACCGCAGAAAATAC+TGG | - | chr8.4:18033319-18033338 | None:intergenic | 40.0% | |
| TCGAGCAGTGTTGTCAATAT+TGG | - | chr8.4:18033336-18033355 | None:intergenic | 40.0% | |
| TCTGCATCGTACCAAATACT+AGG | - | chr8.4:18030671-18030690 | None:intergenic | 40.0% | |
| TCTTGTCATCTTGACGGTTA+GGG | - | chr8.4:18033580-18033599 | None:intergenic | 40.0% | |
| TGAATCAGAGGTTCAGCTTT+AGG | + | chr8.4:18031457-18031476 | MS.gene063498:CDS | 40.0% | |
| TGCCACAGACAGAAGTTTAT+TGG | - | chr8.4:18032041-18032060 | None:intergenic | 40.0% | |
| TGGCAACACTTTGTGCTAAA+TGG | - | chr8.4:18033252-18033271 | None:intergenic | 40.0% | |
| TTTCTATTGCTCGTGATTGG+GGG | + | chr8.4:18030236-18030255 | MS.gene063498:CDS | 40.0% | |
| ! | ATGCAGTCTTGTCATCTTGA+CGG | - | chr8.4:18033586-18033605 | None:intergenic | 40.0% |
| ! | GAGCAAACCAGTATTTTCTG+CGG | + | chr8.4:18033309-18033328 | MS.gene063498:intron | 40.0% |
| ! | GTAACTCTAACTGGCTTATC+AGG | + | chr8.4:18030066-18030085 | MS.gene063498:intron | 40.0% |
| !! | AAAGGAGAGTATCCTTGTCA+AGG | - | chr8.4:18031707-18031726 | None:intergenic | 40.0% |
| !! | AGTACCGACAAAAAATCCAG+TGG | - | chr8.4:18030931-18030950 | None:intergenic | 40.0% |
| !! | AGTATGAAAATGGGTTGGGT+TGG | + | chr8.4:18030108-18030127 | MS.gene063498:intron | 40.0% |
| !! | ATTGAAGCAAGTTGGTTGGT+TGG | - | chr8.4:18029598-18029617 | None:intergenic | 40.0% |
| !! | CACAAAGTGTTGCCAAATAG+TGG | + | chr8.4:18033257-18033276 | MS.gene063498:intron | 40.0% |
| AAGAAAGCAGACAGCCTCTA+AGG | - | chr8.4:18032441-18032460 | None:intergenic | 45.0% | |
| ATATGCAGCACAGTGAACCA+TGG | - | chr8.4:18030518-18030537 | None:intergenic | 45.0% | |
| CACAAGTGAAGTTGGAGCAA+AGG | - | chr8.4:18032607-18032626 | None:intergenic | 45.0% | |
| CCCCTATGTGCAACGTTATA+TGG | - | chr8.4:18030335-18030354 | None:intergenic | 45.0% | |
| CTTGTCATCTTGACGGTTAG+GGG | - | chr8.4:18033579-18033598 | None:intergenic | 45.0% | |
| GAAGATCAAGGGATAAGCCA+AGG | - | chr8.4:18032725-18032744 | None:intergenic | 45.0% | |
| GATCCGGATTGTACTAAGAG+AGG | + | chr8.4:18032322-18032341 | MS.gene063498:intron | 45.0% | |
| GCCCATATAACGTTGCACAT+AGG | + | chr8.4:18030330-18030349 | MS.gene063498:CDS | 45.0% | |
| GGCCTGTTTACAGATTTCAC+TGG | + | chr8.4:18033524-18033543 | MS.gene063498:CDS | 45.0% | |
| GTCTTGTCATCTTGACGGTT+AGG | - | chr8.4:18033581-18033600 | None:intergenic | 45.0% | |
| TAACAGGTGAAATGGTCGGA+CGG | + | chr8.4:18032480-18032499 | MS.gene063498:intron | 45.0% | |
| TACTTTGGCCCGCATTGAAA+TGG | + | chr8.4:18031848-18031867 | MS.gene063498:intron | 45.0% | |
| TATGCAGCACAGTGAACCAT+GGG | - | chr8.4:18030517-18030536 | None:intergenic | 45.0% | |
| TGTAGGAATTGGACCTTGGA+AGG | + | chr8.4:18032938-18032957 | MS.gene063498:CDS | 45.0% | |
| TTGCAGAGAGCTATTGAGGA+AGG | + | chr8.4:18030756-18030775 | MS.gene063498:intron | 45.0% | |
| TTGCCAGGAAGTGGATACAA+AGG | - | chr8.4:18030272-18030291 | None:intergenic | 45.0% | |
| TTGTATCCACTTCCTGGCAA+AGG | + | chr8.4:18030272-18030291 | MS.gene063498:CDS | 45.0% | |
| ! | ATGAATGTGATGGTTGGTGC+TGG | + | chr8.4:18032117-18032136 | MS.gene063498:intron | 45.0% |
| !!! | AAATTATATTTTTAAAAATG+TGG | + | chr8.4:18030471-18030490 | MS.gene063498:intron | 5.0% |
| !!! | ACATTTTTAAAAATATAATT+TGG | - | chr8.4:18030472-18030491 | None:intergenic | 5.0% |
| ACGGCAAACGATTTGAGGAC+AGG | + | chr8.4:18032499-18032518 | MS.gene063498:CDS | 50.0% | |
| ACTTCCTGAAGAAACTCGCG+AGG | + | chr8.4:18030367-18030386 | MS.gene063498:CDS | 50.0% | |
| AGAAACTCGCGAGGCATATC+TGG | + | chr8.4:18030376-18030395 | MS.gene063498:CDS | 50.0% | |
| AGGCCTTTGTATCCACTTCC+TGG | + | chr8.4:18030266-18030285 | MS.gene063498:CDS | 50.0% | |
| CAGATTATGAGCATGTGCCC+TGG | - | chr8.4:18033018-18033037 | None:intergenic | 50.0% | |
| GAAGAGGCTGCTTACTTCCA+TGG | - | chr8.4:18030301-18030320 | None:intergenic | 50.0% | |
| GGCACATGCTCATAATCTGC+AGG | + | chr8.4:18033019-18033038 | MS.gene063498:CDS | 50.0% | |
| GTTGAAGGGGTCATTACCAC+TGG | + | chr8.4:18030912-18030931 | MS.gene063498:CDS | 50.0% | |
| GTTGCACATAGGGGCTCAAA+TGG | + | chr8.4:18030341-18030360 | MS.gene063498:CDS | 50.0% | |
| TATGCCTCGCGAGTTTCTTC+AGG | - | chr8.4:18030374-18030393 | None:intergenic | 50.0% | |
| TCCTTCGGATCTTGTTGCCA+GGG | + | chr8.4:18032998-18033017 | MS.gene063498:CDS | 50.0% | |
| TCTGGGTGCATCCAATGCTA+TGG | - | chr8.4:18031946-18031965 | None:intergenic | 50.0% | |
| TTGGATGCACCCAGAGTTGT+TGG | + | chr8.4:18031951-18031970 | MS.gene063498:CDS | 50.0% | |
| ! | AGTGCTGTTGCGCCACTATT+TGG | - | chr8.4:18033272-18033291 | None:intergenic | 50.0% |
| ! | GCAGACAGCCTCTAAGGAAA+TGG | - | chr8.4:18032435-18032454 | None:intergenic | 50.0% |
| AGTCGCTGAGGGTGAATCAG+AGG | + | chr8.4:18031445-18031464 | MS.gene063498:CDS | 55.0% | |
| ATTGCTCGTGATTGGGGGCA+CGG | + | chr8.4:18030241-18030260 | MS.gene063498:CDS | 55.0% | |
| CTCCTTCGGATCTTGTTGCC+AGG | + | chr8.4:18032997-18033016 | MS.gene063498:CDS | 55.0% | |
| CTTCCATGGTCACCTTTGCC+AGG | - | chr8.4:18030287-18030306 | None:intergenic | 55.0% | |
| CTTCCTGGCAAAGGTGACCA+TGG | + | chr8.4:18030281-18030300 | MS.gene063498:CDS | 55.0% | |
| GTCGGACGGCAAACGATTTG+AGG | + | chr8.4:18032494-18032513 | MS.gene063498:CDS | 55.0% | |
| TGGTCACCTTTGCCAGGAAG+TGG | - | chr8.4:18030281-18030300 | None:intergenic | 55.0% | |
| GCCCTGGCAACAAGATCCGA+AGG | - | chr8.4:18033002-18033021 | None:intergenic | 60.0% | |
| GGCGCAACAGCACTGTAGCA+TGG | + | chr8.4:18033278-18033297 | MS.gene063498:intron | 60.0% | |
| ! | TCGTGATTGGGGGCACGGCT+AGG | + | chr8.4:18030246-18030265 | MS.gene063498:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 18029513 | 18033652 | 18029513 | ID=MS.gene063498 |
| chr8.4 | mRNA | 18029513 | 18033652 | 18029513 | ID=MS.gene063498.t1;Parent=MS.gene063498 |
| chr8.4 | exon | 18029513 | 18029528 | 18029513 | ID=MS.gene063498.t1.exon1;Parent=MS.gene063498.t1 |
| chr8.4 | CDS | 18029513 | 18029528 | 18029513 | ID=cds.MS.gene063498.t1;Parent=MS.gene063498.t1 |
| chr8.4 | exon | 18030219 | 18030397 | 18030219 | ID=MS.gene063498.t1.exon2;Parent=MS.gene063498.t1 |
| chr8.4 | CDS | 18030219 | 18030397 | 18030219 | ID=cds.MS.gene063498.t1;Parent=MS.gene063498.t1 |
| chr8.4 | exon | 18030762 | 18030945 | 18030762 | ID=MS.gene063498.t1.exon3;Parent=MS.gene063498.t1 |
| chr8.4 | CDS | 18030762 | 18030945 | 18030762 | ID=cds.MS.gene063498.t1;Parent=MS.gene063498.t1 |
| chr8.4 | exon | 18031421 | 18031495 | 18031421 | ID=MS.gene063498.t1.exon4;Parent=MS.gene063498.t1 |
| chr8.4 | CDS | 18031421 | 18031495 | 18031421 | ID=cds.MS.gene063498.t1;Parent=MS.gene063498.t1 |
| chr8.4 | exon | 18031907 | 18032016 | 18031907 | ID=MS.gene063498.t1.exon5;Parent=MS.gene063498.t1 |
| chr8.4 | CDS | 18031907 | 18032016 | 18031907 | ID=cds.MS.gene063498.t1;Parent=MS.gene063498.t1 |
| chr8.4 | exon | 18032486 | 18032704 | 18032486 | ID=MS.gene063498.t1.exon6;Parent=MS.gene063498.t1 |
| chr8.4 | CDS | 18032486 | 18032704 | 18032486 | ID=cds.MS.gene063498.t1;Parent=MS.gene063498.t1 |
| chr8.4 | exon | 18032885 | 18033040 | 18032885 | ID=MS.gene063498.t1.exon7;Parent=MS.gene063498.t1 |
| chr8.4 | CDS | 18032885 | 18033040 | 18032885 | ID=cds.MS.gene063498.t1;Parent=MS.gene063498.t1 |
| chr8.4 | exon | 18033419 | 18033652 | 18033419 | ID=MS.gene063498.t1.exon8;Parent=MS.gene063498.t1 |
| chr8.4 | CDS | 18033419 | 18033652 | 18033419 | ID=cds.MS.gene063498.t1;Parent=MS.gene063498.t1 |
| Gene Sequence |
| Protein sequence |
