Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065298.t1 | XP_003590402.1 | 98 | 546 | 9 | 1 | 1 | 544 | 1 | 546 | 9.0e-310 | 1072 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065298.t1 | P36616 | 44.7 | 474 | 237 | 5 | 17 | 476 | 54 | 516 | 1.4e-106 | 388.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065298.t1 | G7I9C7 | 98.0 | 546 | 9 | 1 | 1 | 544 | 1 | 546 | 6.5e-310 | 1072.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene94627 | MS.gene065298 | PPI |
MS.gene72659 | MS.gene065298 | PPI |
MS.gene065298 | MS.gene65332 | PPI |
MS.gene065298 | MS.gene69969 | PPI |
MS.gene066499 | MS.gene065298 | PPI |
MS.gene35337 | MS.gene065298 | PPI |
MS.gene065298 | MS.gene09394 | PPI |
MS.gene065298 | MS.gene91510 | PPI |
MS.gene065298 | MS.gene007767 | PPI |
MS.gene99555 | MS.gene065298 | PPI |
MS.gene065298 | MS.gene64891 | PPI |
MS.gene23814 | MS.gene065298 | PPI |
MS.gene065298 | MS.gene049739 | PPI |
MS.gene065298 | MS.gene03728 | PPI |
MS.gene065298 | MS.gene86544 | PPI |
MS.gene065298 | MS.gene073119 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065298.t1 | MTR_1g061690 | 97.985 | 546 | 9 | 1 | 1 | 544 | 1 | 546 | 0.0 | 1117 |
MS.gene065298.t1 | MTR_4g056390 | 67.547 | 530 | 164 | 3 | 12 | 533 | 7 | 536 | 0.0 | 757 |
MS.gene065298.t1 | MTR_2g084555 | 68.371 | 528 | 154 | 3 | 11 | 530 | 7 | 529 | 0.0 | 748 |
MS.gene065298.t1 | MTR_5g024270 | 53.275 | 458 | 156 | 4 | 23 | 479 | 17 | 417 | 4.44e-172 | 494 |
MS.gene065298.t1 | MTR_8g073250 | 52.423 | 454 | 156 | 4 | 23 | 476 | 17 | 410 | 1.65e-169 | 487 |
MS.gene065298.t1 | MTR_5g024270 | 52.480 | 383 | 124 | 4 | 23 | 404 | 17 | 342 | 7.44e-135 | 397 |
MS.gene065298.t1 | MTR_3g076540 | 39.241 | 158 | 89 | 4 | 29 | 186 | 80 | 230 | 8.86e-28 | 116 |
MS.gene065298.t1 | MTR_3g076540 | 30.899 | 178 | 88 | 6 | 317 | 476 | 259 | 419 | 2.45e-17 | 84.7 |
MS.gene065298.t1 | MTR_3g076540 | 39.241 | 158 | 89 | 4 | 29 | 186 | 80 | 230 | 1.20e-27 | 115 |
MS.gene065298.t1 | MTR_3g076540 | 29.570 | 186 | 88 | 7 | 317 | 476 | 259 | 427 | 8.62e-15 | 77.0 |
MS.gene065298.t1 | MTR_4g104620 | 38.217 | 157 | 90 | 4 | 29 | 185 | 84 | 233 | 3.20e-27 | 114 |
MS.gene065298.t1 | MTR_4g104620 | 30.857 | 175 | 86 | 6 | 317 | 473 | 263 | 420 | 8.15e-16 | 80.1 |
MS.gene065298.t1 | MTR_3g076540 | 40.132 | 152 | 84 | 4 | 35 | 186 | 4 | 148 | 1.10e-26 | 111 |
MS.gene065298.t1 | MTR_3g076540 | 30.899 | 178 | 88 | 6 | 317 | 476 | 177 | 337 | 1.69e-17 | 84.3 |
MS.gene065298.t1 | MTR_3g109390 | 36.250 | 160 | 95 | 4 | 27 | 186 | 58 | 210 | 1.22e-26 | 111 |
MS.gene065298.t1 | MTR_3g109390 | 40.206 | 97 | 52 | 1 | 317 | 413 | 238 | 328 | 6.10e-16 | 79.7 |
MS.gene065298.t1 | MTR_3g109390 | 36.250 | 160 | 95 | 4 | 27 | 186 | 58 | 210 | 1.55e-26 | 112 |
MS.gene065298.t1 | MTR_3g109390 | 33.523 | 176 | 88 | 4 | 317 | 478 | 238 | 398 | 1.08e-20 | 94.7 |
MS.gene065298.t1 | MTR_3g109390 | 36.250 | 160 | 95 | 4 | 27 | 186 | 58 | 210 | 1.60e-26 | 112 |
MS.gene065298.t1 | MTR_3g109390 | 32.955 | 176 | 91 | 3 | 317 | 478 | 238 | 400 | 2.87e-21 | 96.7 |
MS.gene065298.t1 | MTR_3g109390 | 36.250 | 160 | 95 | 4 | 27 | 186 | 36 | 188 | 1.94e-26 | 111 |
MS.gene065298.t1 | MTR_3g109390 | 32.955 | 176 | 91 | 3 | 317 | 478 | 216 | 378 | 2.34e-21 | 96.7 |
MS.gene065298.t1 | MTR_3g086530 | 33.529 | 170 | 103 | 5 | 19 | 185 | 66 | 228 | 2.71e-25 | 106 |
MS.gene065298.t1 | MTR_3g086530 | 33.529 | 170 | 103 | 5 | 19 | 185 | 66 | 228 | 5.44e-25 | 107 |
MS.gene065298.t1 | MTR_3g086530 | 33.654 | 104 | 63 | 1 | 317 | 420 | 260 | 357 | 2.68e-13 | 72.0 |
MS.gene065298.t1 | MTR_3g086530 | 33.529 | 170 | 103 | 5 | 19 | 185 | 66 | 228 | 1.01e-24 | 107 |
MS.gene065298.t1 | MTR_3g086530 | 33.654 | 104 | 63 | 1 | 317 | 420 | 260 | 357 | 2.31e-13 | 72.4 |
MS.gene065298.t1 | MTR_4g104620 | 39.286 | 140 | 79 | 3 | 46 | 185 | 6 | 139 | 2.18e-24 | 104 |
MS.gene065298.t1 | MTR_4g104620 | 30.857 | 175 | 86 | 6 | 317 | 473 | 169 | 326 | 7.08e-16 | 79.3 |
MS.gene065298.t1 | MTR_8g070930 | 40.816 | 147 | 81 | 3 | 41 | 186 | 136 | 277 | 1.13e-23 | 106 |
MS.gene065298.t1 | MTR_8g070930 | 38.333 | 120 | 64 | 3 | 308 | 423 | 273 | 386 | 1.45e-15 | 80.5 |
MS.gene065298.t1 | MTR_3g076540 | 39.416 | 137 | 77 | 3 | 50 | 186 | 1 | 131 | 2.99e-23 | 101 |
MS.gene065298.t1 | MTR_3g076540 | 30.899 | 178 | 88 | 6 | 317 | 476 | 160 | 320 | 1.77e-17 | 84.0 |
MS.gene065298.t1 | MTR_4g104620 | 38.971 | 136 | 77 | 3 | 50 | 185 | 1 | 130 | 6.18e-23 | 100 |
MS.gene065298.t1 | MTR_4g104620 | 30.857 | 175 | 86 | 6 | 317 | 473 | 160 | 317 | 7.95e-16 | 79.0 |
MS.gene065298.t1 | MTR_3g109390 | 37.313 | 134 | 78 | 3 | 53 | 186 | 70 | 197 | 1.79e-21 | 97.1 |
MS.gene065298.t1 | MTR_3g109390 | 32.955 | 176 | 91 | 3 | 317 | 478 | 225 | 387 | 4.03e-21 | 95.9 |
MS.gene065298.t1 | MTR_3g109390 | 37.313 | 134 | 78 | 3 | 53 | 186 | 92 | 219 | 2.44e-21 | 97.1 |
MS.gene065298.t1 | MTR_3g109390 | 32.955 | 176 | 91 | 3 | 317 | 478 | 247 | 409 | 8.08e-21 | 95.1 |
MS.gene065298.t1 | MTR_6g074905 | 29.213 | 178 | 110 | 5 | 306 | 476 | 996 | 1164 | 1.88e-18 | 89.7 |
MS.gene065298.t1 | MTR_3g086530 | 37.069 | 116 | 67 | 3 | 70 | 185 | 2 | 111 | 2.89e-18 | 86.3 |
MS.gene065298.t1 | MTR_3g086530 | 33.654 | 104 | 63 | 1 | 317 | 420 | 143 | 240 | 1.15e-13 | 72.4 |
MS.gene065298.t1 | MTR_5g082700 | 29.944 | 177 | 110 | 5 | 306 | 476 | 537 | 705 | 8.48e-18 | 87.4 |
MS.gene065298.t1 | MTR_5g082700 | 33.548 | 155 | 94 | 3 | 35 | 185 | 394 | 543 | 8.22e-15 | 77.8 |
MS.gene065298.t1 | MTR_1g111180 | 32.500 | 160 | 97 | 5 | 29 | 183 | 661 | 814 | 4.33e-17 | 85.5 |
MS.gene065298.t1 | MTR_1g111180 | 31.720 | 186 | 102 | 5 | 308 | 476 | 813 | 990 | 4.19e-15 | 79.3 |
MS.gene065298.t1 | MTR_1g111180 | 32.500 | 160 | 97 | 5 | 29 | 183 | 662 | 815 | 4.45e-17 | 85.5 |
MS.gene065298.t1 | MTR_1g111180 | 31.720 | 186 | 102 | 5 | 308 | 476 | 814 | 991 | 4.23e-15 | 79.3 |
MS.gene065298.t1 | MTR_0349s0030 | 29.609 | 179 | 110 | 5 | 306 | 477 | 116 | 285 | 1.19e-16 | 81.3 |
MS.gene065298.t1 | MTR_5g082700 | 33.548 | 155 | 94 | 3 | 35 | 185 | 394 | 543 | 5.52e-15 | 78.2 |
MS.gene065298.t1 | MTR_5g082700 | 33.548 | 155 | 94 | 3 | 35 | 185 | 394 | 543 | 8.23e-15 | 77.8 |
MS.gene065298.t1 | MTR_5g082700 | 31.200 | 125 | 78 | 3 | 306 | 428 | 537 | 655 | 4.16e-12 | 69.3 |
MS.gene065298.t1 | MTR_3g086530 | 33.333 | 105 | 64 | 1 | 316 | 420 | 87 | 185 | 3.60e-14 | 73.2 |
MS.gene065298.t1 | MTR_6g074870 | 30.973 | 113 | 70 | 2 | 306 | 416 | 227 | 333 | 3.60e-12 | 68.2 |
MS.gene065298.t1 | MTR_4g117490 | 34.254 | 181 | 92 | 9 | 306 | 477 | 155 | 317 | 4.28e-12 | 68.9 |
MS.gene065298.t1 | MTR_4g087620 | 32.292 | 192 | 107 | 9 | 289 | 476 | 168 | 340 | 9.12e-12 | 67.4 |
MS.gene065298.t1 | MTR_6g074750 | 39.130 | 69 | 40 | 1 | 306 | 372 | 45 | 113 | 1.07e-11 | 62.4 |
MS.gene065298.t1 | MTR_4g117490 | 32.828 | 198 | 106 | 9 | 289 | 477 | 138 | 317 | 4.16e-11 | 65.9 |
MS.gene065298.t1 | MTR_8g028720 | 33.898 | 177 | 87 | 9 | 308 | 476 | 169 | 323 | 5.51e-11 | 64.7 |
MS.gene065298.t1 | MTR_8g098845 | 28.870 | 239 | 132 | 9 | 289 | 521 | 165 | 371 | 7.39e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065298.t1 | AT3G53030 | 72.180 | 532 | 125 | 6 | 10 | 535 | 8 | 522 | 0.0 | 785 |
MS.gene065298.t1 | AT5G22840 | 69.349 | 522 | 147 | 4 | 10 | 528 | 11 | 522 | 0.0 | 756 |
MS.gene065298.t1 | AT3G44850 | 69.582 | 526 | 144 | 6 | 9 | 524 | 10 | 529 | 0.0 | 754 |
MS.gene065298.t1 | AT4G35500 | 53.187 | 455 | 159 | 4 | 25 | 479 | 19 | 419 | 1.10e-172 | 495 |
MS.gene065298.t1 | AT2G17530 | 51.101 | 454 | 167 | 3 | 25 | 478 | 19 | 417 | 5.56e-164 | 473 |
MS.gene065298.t1 | AT2G17530 | 51.101 | 454 | 167 | 3 | 25 | 478 | 19 | 417 | 5.56e-164 | 473 |
MS.gene065298.t1 | AT4G35500 | 51.316 | 456 | 167 | 5 | 25 | 479 | 19 | 420 | 1.65e-163 | 472 |
MS.gene065298.t1 | AT2G17530 | 49.868 | 379 | 135 | 3 | 25 | 403 | 19 | 342 | 8.91e-125 | 370 |
MS.gene065298.t1 | AT4G24740 | 37.791 | 172 | 99 | 5 | 29 | 200 | 84 | 247 | 6.11e-29 | 117 |
MS.gene065298.t1 | AT4G24740 | 37.791 | 172 | 99 | 5 | 29 | 200 | 84 | 247 | 8.41e-29 | 117 |
MS.gene065298.t1 | AT4G24740 | 35.833 | 120 | 70 | 2 | 284 | 403 | 231 | 343 | 1.79e-14 | 75.5 |
MS.gene065298.t1 | AT4G24740 | 37.791 | 172 | 99 | 5 | 29 | 200 | 46 | 209 | 1.51e-28 | 117 |
MS.gene065298.t1 | AT4G24740 | 29.858 | 211 | 112 | 7 | 284 | 476 | 193 | 385 | 6.96e-18 | 86.3 |
MS.gene065298.t1 | AT4G24740 | 37.791 | 172 | 99 | 5 | 29 | 200 | 84 | 247 | 2.02e-28 | 118 |
MS.gene065298.t1 | AT4G24740 | 29.858 | 211 | 112 | 7 | 284 | 476 | 231 | 423 | 7.24e-18 | 86.7 |
MS.gene065298.t1 | AT3G53570 | 37.059 | 170 | 97 | 5 | 20 | 186 | 89 | 251 | 1.32e-26 | 113 |
MS.gene065298.t1 | AT3G53570 | 31.868 | 182 | 90 | 5 | 316 | 479 | 281 | 446 | 9.42e-18 | 86.7 |
MS.gene065298.t1 | AT3G53570 | 37.059 | 170 | 97 | 5 | 20 | 186 | 89 | 251 | 1.32e-26 | 113 |
MS.gene065298.t1 | AT3G53570 | 31.868 | 182 | 90 | 5 | 316 | 479 | 281 | 446 | 9.42e-18 | 86.7 |
MS.gene065298.t1 | AT3G53570 | 37.059 | 170 | 97 | 5 | 20 | 186 | 89 | 251 | 1.32e-26 | 113 |
MS.gene065298.t1 | AT3G53570 | 31.868 | 182 | 90 | 5 | 316 | 479 | 281 | 446 | 9.42e-18 | 86.7 |
MS.gene065298.t1 | AT3G53570 | 37.059 | 170 | 97 | 5 | 20 | 186 | 75 | 237 | 1.32e-26 | 113 |
MS.gene065298.t1 | AT3G53570 | 31.868 | 182 | 90 | 5 | 316 | 479 | 267 | 432 | 1.01e-17 | 86.3 |
MS.gene065298.t1 | AT3G53570 | 37.059 | 170 | 97 | 5 | 20 | 186 | 75 | 237 | 1.32e-26 | 113 |
MS.gene065298.t1 | AT3G53570 | 31.868 | 182 | 90 | 5 | 316 | 479 | 267 | 432 | 1.01e-17 | 86.3 |
MS.gene065298.t1 | AT4G32660 | 35.625 | 160 | 96 | 4 | 27 | 186 | 55 | 207 | 2.82e-26 | 110 |
MS.gene065298.t1 | AT4G32660 | 42.574 | 101 | 51 | 3 | 317 | 416 | 235 | 329 | 2.22e-15 | 78.2 |
MS.gene065298.t1 | AT4G32660 | 35.625 | 160 | 96 | 3 | 27 | 186 | 47 | 199 | 3.71e-26 | 110 |
MS.gene065298.t1 | AT4G32660 | 34.682 | 173 | 95 | 5 | 317 | 479 | 227 | 391 | 4.52e-18 | 86.7 |
MS.gene065298.t1 | AT4G32660 | 35.625 | 160 | 96 | 4 | 27 | 186 | 55 | 207 | 4.20e-26 | 110 |
MS.gene065298.t1 | AT4G32660 | 34.682 | 173 | 95 | 5 | 317 | 479 | 235 | 399 | 4.70e-18 | 87.0 |
MS.gene065298.t1 | AT4G24740 | 38.411 | 151 | 86 | 4 | 50 | 200 | 1 | 144 | 2.31e-25 | 105 |
MS.gene065298.t1 | AT4G24740 | 35.833 | 120 | 70 | 2 | 284 | 403 | 128 | 240 | 1.04e-14 | 74.3 |
MS.gene065298.t1 | AT4G24740 | 38.411 | 151 | 86 | 4 | 50 | 200 | 1 | 144 | 6.78e-25 | 105 |
MS.gene065298.t1 | AT4G24740 | 29.858 | 211 | 112 | 7 | 284 | 476 | 128 | 320 | 6.50e-18 | 85.5 |
MS.gene065298.t1 | AT4G24740 | 38.411 | 151 | 86 | 4 | 50 | 200 | 1 | 144 | 6.78e-25 | 105 |
MS.gene065298.t1 | AT4G24740 | 29.858 | 211 | 112 | 7 | 284 | 476 | 128 | 320 | 6.50e-18 | 85.5 |
MS.gene065298.t1 | AT4G24740 | 38.411 | 151 | 86 | 4 | 50 | 200 | 1 | 144 | 6.78e-25 | 105 |
MS.gene065298.t1 | AT4G24740 | 29.858 | 211 | 112 | 7 | 284 | 476 | 128 | 320 | 6.50e-18 | 85.5 |
MS.gene065298.t1 | AT5G35980 | 40.667 | 150 | 83 | 3 | 43 | 191 | 121 | 265 | 7.55e-25 | 109 |
MS.gene065298.t1 | AT5G35980 | 38.525 | 122 | 65 | 4 | 306 | 423 | 253 | 368 | 3.32e-15 | 79.3 |
MS.gene065298.t1 | AT5G35980 | 39.024 | 164 | 90 | 4 | 33 | 191 | 72 | 230 | 8.19e-25 | 109 |
MS.gene065298.t1 | AT5G35980 | 38.525 | 122 | 65 | 4 | 306 | 423 | 218 | 333 | 4.51e-15 | 79.0 |
MS.gene065298.t1 | AT5G35980 | 40.523 | 153 | 85 | 3 | 40 | 191 | 118 | 265 | 1.44e-24 | 108 |
MS.gene065298.t1 | AT5G35980 | 38.525 | 122 | 65 | 4 | 306 | 423 | 253 | 368 | 4.46e-15 | 79.0 |
MS.gene065298.t1 | AT1G73460 | 30.726 | 179 | 108 | 5 | 306 | 477 | 992 | 1161 | 6.83e-21 | 97.8 |
MS.gene065298.t1 | AT1G73460 | 32.886 | 149 | 91 | 3 | 41 | 185 | 855 | 998 | 3.36e-13 | 73.2 |
MS.gene065298.t1 | AT1G73460 | 30.726 | 179 | 108 | 5 | 306 | 477 | 992 | 1161 | 6.83e-21 | 97.8 |
MS.gene065298.t1 | AT1G73460 | 32.886 | 149 | 91 | 3 | 41 | 185 | 855 | 998 | 3.36e-13 | 73.2 |
MS.gene065298.t1 | AT1G73450 | 30.726 | 179 | 108 | 5 | 306 | 477 | 975 | 1144 | 8.09e-21 | 97.4 |
MS.gene065298.t1 | AT1G73450 | 32.886 | 149 | 91 | 3 | 41 | 185 | 838 | 981 | 3.52e-13 | 73.2 |
MS.gene065298.t1 | AT4G24740 | 29.858 | 211 | 112 | 7 | 284 | 476 | 25 | 217 | 3.08e-19 | 87.0 |
MS.gene065298.t1 | AT4G24740 | 29.858 | 211 | 112 | 7 | 284 | 476 | 25 | 217 | 3.08e-19 | 87.0 |
MS.gene065298.t1 | AT2G40120 | 31.285 | 179 | 111 | 5 | 306 | 479 | 395 | 566 | 6.29e-19 | 90.5 |
MS.gene065298.t1 | AT2G40120 | 33.548 | 155 | 94 | 3 | 35 | 185 | 252 | 401 | 1.16e-14 | 77.4 |
MS.gene065298.t1 | AT4G32660 | 34.682 | 173 | 95 | 5 | 317 | 479 | 123 | 287 | 2.57e-18 | 85.9 |
MS.gene065298.t1 | AT4G32660 | 36.364 | 99 | 57 | 2 | 88 | 186 | 3 | 95 | 7.44e-14 | 72.8 |
MS.gene065298.t1 | AT3G17750 | 29.545 | 176 | 112 | 4 | 306 | 476 | 961 | 1129 | 6.86e-18 | 88.2 |
MS.gene065298.t1 | AT3G17750 | 32.500 | 160 | 97 | 4 | 30 | 185 | 815 | 967 | 5.31e-14 | 75.9 |
MS.gene065298.t1 | AT3G25840 | 31.250 | 160 | 99 | 5 | 29 | 183 | 603 | 756 | 3.47e-15 | 79.3 |
MS.gene065298.t1 | AT3G25840 | 32.571 | 175 | 97 | 5 | 317 | 476 | 764 | 932 | 4.06e-14 | 75.9 |
MS.gene065298.t1 | AT3G53640 | 33.146 | 178 | 93 | 7 | 317 | 476 | 470 | 639 | 3.83e-15 | 79.0 |
MS.gene065298.t1 | AT3G53640 | 30.625 | 160 | 100 | 5 | 29 | 183 | 309 | 462 | 8.26e-13 | 71.6 |
MS.gene065298.t1 | AT1G13350 | 30.625 | 160 | 100 | 5 | 29 | 183 | 428 | 581 | 6.30e-15 | 78.6 |
MS.gene065298.t1 | AT1G13350 | 30.682 | 176 | 100 | 5 | 317 | 476 | 589 | 758 | 1.91e-14 | 77.0 |
MS.gene065298.t1 | AT3G25840 | 31.250 | 160 | 99 | 5 | 29 | 183 | 341 | 494 | 8.46e-15 | 77.8 |
MS.gene065298.t1 | AT3G25840 | 32.571 | 175 | 97 | 5 | 317 | 476 | 502 | 670 | 4.73e-14 | 75.5 |
MS.gene065298.t1 | AT1G13350 | 30.625 | 160 | 100 | 5 | 29 | 183 | 455 | 608 | 8.67e-15 | 78.2 |
MS.gene065298.t1 | AT1G13350 | 30.682 | 176 | 100 | 5 | 317 | 476 | 616 | 785 | 2.74e-14 | 76.6 |
MS.gene065298.t1 | AT1G13350 | 30.625 | 160 | 100 | 5 | 29 | 183 | 501 | 654 | 1.65e-14 | 77.0 |
MS.gene065298.t1 | AT1G13350 | 30.682 | 176 | 100 | 5 | 317 | 476 | 662 | 831 | 4.11e-14 | 75.9 |
MS.gene065298.t1 | AT1G73670 | 31.053 | 190 | 105 | 9 | 306 | 486 | 220 | 392 | 1.18e-12 | 70.9 |
MS.gene065298.t1 | AT3G59790 | 29.333 | 225 | 126 | 9 | 289 | 510 | 173 | 367 | 6.29e-12 | 67.8 |
MS.gene065298.t1 | AT2G30980 | 31.148 | 183 | 101 | 8 | 315 | 494 | 211 | 371 | 4.49e-11 | 65.5 |
Find 137 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCCATAAGCACTTTATTTA+AGG | 0.062791 | 1.2:-46956253 | None:intergenic |
AGAGATATGCTTTCATATTT+TGG | 0.133189 | 1.2:+46950076 | MS.gene065298:CDS |
CATCTTTGTCCTTGTTCTTC+TGG | 0.137125 | 1.2:-46956470 | None:intergenic |
CGGGATTTCTTCAATAGATA+TGG | 0.256557 | 1.2:+46956195 | MS.gene065298:CDS |
GCCCTTAAATAAAGTGCTTA+TGG | 0.273324 | 1.2:+46956251 | MS.gene065298:CDS |
GCATTAATGATGGAACTTCT+TGG | 0.282888 | 1.2:+46956051 | MS.gene065298:CDS |
GAATGTAAGTCCCCGTCTTT+TGG | 0.289223 | 1.2:+46956392 | MS.gene065298:CDS |
TATACTTAATAAGAGTTAAT+AGG | 0.290620 | 1.2:-46950019 | None:intergenic |
TCTCCACTGTTTGGCTCGCT+TGG | 0.295410 | 1.2:+46948719 | MS.gene065298:CDS |
CCTTGGAATACTTTCTTTGA+TGG | 0.309821 | 1.2:-46956564 | None:intergenic |
TTAGACCATTTCAAGCATTC+TGG | 0.313545 | 1.2:+46949948 | MS.gene065298:CDS |
TCCATAAGCACTTTATTTAA+GGG | 0.317347 | 1.2:-46956252 | None:intergenic |
ATTCTACATCTGCGGATCTT+TGG | 0.322906 | 1.2:+46950672 | MS.gene065298:CDS |
CGTTCAGAGCAAGCTTGGTT+GGG | 0.325907 | 1.2:+46948690 | MS.gene065298:CDS |
TTGACTTTGGTAATGCTTGC+TGG | 0.327850 | 1.2:+46950576 | MS.gene065298:CDS |
TCGCGGATTGCCTATCAATA+TGG | 0.331065 | 1.2:+46950049 | MS.gene065298:CDS |
ATAGTCTTGTCTTTACTGTT+AGG | 0.332521 | 1.2:-46950227 | None:intergenic |
ATCTTCGGTGCCTTCGTCTT+CGG | 0.333303 | 1.2:-46948605 | None:intergenic |
ATATCCGCCGGCTGCGATTC+TGG | 0.333827 | 1.2:+46956229 | MS.gene065298:CDS |
GGGGTCATTTCTCCACTGTT+TGG | 0.341167 | 1.2:+46948710 | MS.gene065298:CDS |
CTCCACTGTTTGGCTCGCTT+GGG | 0.347766 | 1.2:+46948720 | MS.gene065298:CDS |
AAGAGGAGCACCAGATTTCC+TGG | 0.363522 | 1.2:-46950198 | None:intergenic |
GAGGCCATGGAGGCTGGAAT+TGG | 0.365219 | 1.2:+46956498 | MS.gene065298:CDS |
ATCAACAATTGATCCGTCTA+AGG | 0.368658 | 1.2:+46950172 | MS.gene065298:CDS |
ATACAAACATGCTGTCCATT+TGG | 0.376683 | 1.2:-46949972 | None:intergenic |
ATAGTGGTGACAACTTTGAT+AGG | 0.377741 | 1.2:+46950750 | MS.gene065298:CDS |
ATCTCTTTAACCATATTGAT+AGG | 0.403343 | 1.2:-46950059 | None:intergenic |
GAGAGGGAGGCCATGGAGGC+TGG | 0.404591 | 1.2:+46956492 | MS.gene065298:CDS |
TGATTAGAAGACGGCATTGA+TGG | 0.409832 | 1.2:-46956417 | None:intergenic |
TCTAAGGATCCCAGGAAATC+TGG | 0.413304 | 1.2:+46950188 | MS.gene065298:CDS |
GGAGGTGAAATCGCTGCTTT+CGG | 0.420256 | 1.2:-46948584 | None:intergenic |
AAATGGACAGCATGTTTGTA+TGG | 0.420622 | 1.2:+46949974 | MS.gene065298:CDS |
TTCAAGCATTCTGGTCCAAA+TGG | 0.428400 | 1.2:+46949957 | MS.gene065298:CDS |
AGAGACACTAAAACATCAAA+TGG | 0.428919 | 1.2:+46950269 | MS.gene065298:CDS |
CTAGTTCTGCTGGCACTAGT+AGG | 0.430061 | 1.2:+46950447 | MS.gene065298:CDS |
ACATCCATGAGCTGCTTGCT+TGG | 0.434213 | 1.2:-46950333 | None:intergenic |
TGAACTACTTGCGGCTGCCT+TGG | 0.440976 | 1.2:-46956581 | None:intergenic |
TACGTCGTTCAGAGCAAGCT+TGG | 0.451040 | 1.2:+46948685 | MS.gene065298:CDS |
TTGGACCAGAATGCTTGAAA+TGG | 0.452574 | 1.2:-46949953 | None:intergenic |
CGGTGCCCAGAGGTTATCCT+TGG | 0.454662 | 1.2:+46950641 | MS.gene065298:CDS |
GGCTACCACGCCGTTCGAAT+CGG | 0.458904 | 1.2:+46948640 | MS.gene065298:CDS |
GCATTACACAGAGGCTGCCC+TGG | 0.469898 | 1.2:+46949857 | MS.gene065298:CDS |
CCGGCTGTAGGTCGTTTCTC+AGG | 0.474020 | 1.2:-46956345 | None:intergenic |
GAAGTAGCAGTTTCAGCACC+AGG | 0.474460 | 1.2:-46956444 | None:intergenic |
CATATCTATTGAAGAAATCC+CGG | 0.482137 | 1.2:-46956194 | None:intergenic |
CAAAGATGAGAGGGAGGCCA+TGG | 0.484725 | 1.2:+46956485 | MS.gene065298:CDS |
CATTGATGGCTCCAAAAGAC+GGG | 0.487038 | 1.2:-46956403 | None:intergenic |
AAGAAATTTATTACCTTCCG+TGG | 0.488916 | 1.2:-46956081 | None:intergenic |
TCGTTCAGAGCAAGCTTGGT+TGG | 0.490066 | 1.2:+46948689 | MS.gene065298:CDS |
AGCTCATGGATGTGCGGAGA+AGG | 0.490342 | 1.2:+46950343 | MS.gene065298:CDS |
GAAATCGCTGCTTTCGGTGG+TGG | 0.490996 | 1.2:-46948578 | None:intergenic |
GCAAAATCGTTATCTCATCC+AGG | 0.491981 | 1.2:-46949875 | None:intergenic |
AAGTGCAAGTTAGTTGACTT+TGG | 0.494805 | 1.2:+46950563 | MS.gene065298:CDS |
CATTCATCCACGGATGTAGC+AGG | 0.497804 | 1.2:-46956374 | None:intergenic |
TCTATTGCAGAACTTGCATT+CGG | 0.498592 | 1.2:-46950416 | None:intergenic |
TTTGATCCAAGGATAACCTC+TGG | 0.500060 | 1.2:-46950647 | None:intergenic |
CGGATGTAGCAGGCATTGAC+CGG | 0.500642 | 1.2:-46956364 | None:intergenic |
ATCGGCGACACCTTCAGCTC+CGG | 0.504104 | 1.2:+46948658 | MS.gene065298:CDS |
TGGAATGAAGTCAAAAGAGC+AGG | 0.504504 | 1.2:+46950484 | MS.gene065298:CDS |
AAAGCCAAGCAAGCAGCTCA+TGG | 0.505034 | 1.2:+46950329 | MS.gene065298:CDS |
CAGTAAAGACAAGACTATGC+TGG | 0.508183 | 1.2:+46950232 | MS.gene065298:CDS |
GTTCAGAGCAAGCTTGGTTG+GGG | 0.508393 | 1.2:+46948691 | MS.gene065298:CDS |
TATAATTCTCAGATCGCACT+AGG | 0.509453 | 1.2:+46956159 | MS.gene065298:intron |
GCCACCGCGTCGGTAATCTT+CGG | 0.513825 | 1.2:-46948620 | None:intergenic |
GAACAAGCTTCTAGTTCTGC+TGG | 0.516084 | 1.2:+46950437 | MS.gene065298:CDS |
AAAGAGCAGGGCAACAGAAG+AGG | 0.522055 | 1.2:+46950497 | MS.gene065298:CDS |
GTTTCCAATTCCAGCCTCCA+TGG | 0.523041 | 1.2:-46956502 | None:intergenic |
TTACTGTTAGGAAGAATAAG+AGG | 0.526154 | 1.2:-46950215 | None:intergenic |
TTCGGTGCCTTCGTCTTCGG+AGG | 0.544959 | 1.2:-46948602 | None:intergenic |
GTCAATGCCTGCTACATCCG+TGG | 0.547156 | 1.2:+46956367 | MS.gene065298:CDS |
GAACAAGGACAAAGATGAGA+GGG | 0.551701 | 1.2:+46956476 | MS.gene065298:CDS |
GAGAAGGAGGCATCTGAAGA+TGG | 0.552642 | 1.2:+46950359 | MS.gene065298:CDS |
GCATTGATGGCTCCAAAAGA+CGG | 0.555544 | 1.2:-46956404 | None:intergenic |
GGACCACTTAGCATTAATGA+TGG | 0.555688 | 1.2:+46956041 | MS.gene065298:intron |
GATTTCCTGGGATCCTTAGA+CGG | 0.556902 | 1.2:-46950185 | None:intergenic |
GATCAATTGTTGATAAGAGA+AGG | 0.558128 | 1.2:-46950163 | None:intergenic |
TCAAAGTTGTCACCACTATG+AGG | 0.558782 | 1.2:-46950746 | None:intergenic |
GTTCCATCATTAATGCTAAG+TGG | 0.559588 | 1.2:-46956044 | None:intergenic |
ATATCTATTGAAGAAATCCC+GGG | 0.566218 | 1.2:-46956193 | None:intergenic |
TTGATCCGTCTAAGGATCCC+AGG | 0.566867 | 1.2:+46950180 | MS.gene065298:CDS |
GTATTATTTGATCCTCATAG+TGG | 0.567179 | 1.2:+46950734 | MS.gene065298:CDS |
GAAGGTGTCGCCGATTCGAA+CGG | 0.572234 | 1.2:-46948650 | None:intergenic |
CACTAGTAGGTTATCAGATG+CGG | 0.576983 | 1.2:+46950460 | MS.gene065298:CDS |
TTAAGGGCCAGAATCGCAGC+CGG | 0.579948 | 1.2:-46956236 | None:intergenic |
CAAGGACAAAGATGAGAGGG+AGG | 0.580802 | 1.2:+46956479 | MS.gene065298:CDS |
TGGGTCAAACAAATGGGTGG+CGG | 0.584188 | 1.2:+46948544 | None:intergenic |
CTATCAAGATGAACTACTTG+CGG | 0.587404 | 1.2:-46956590 | None:intergenic |
TTGATCCAAGGATAACCTCT+GGG | 0.587839 | 1.2:-46950646 | None:intergenic |
GCTCTGAACGACGTAACGAC+CGG | 0.589457 | 1.2:-46948677 | None:intergenic |
GACGTAACGACCGGAGCTGA+AGG | 0.591562 | 1.2:-46948668 | None:intergenic |
GGTGAAATCGCTGCTTTCGG+TGG | 0.592150 | 1.2:-46948581 | None:intergenic |
TCATGGATGTGCGGAGAAGG+AGG | 0.595831 | 1.2:+46950346 | MS.gene065298:CDS |
CCTGAGAAACGACCTACAGC+CGG | 0.605154 | 1.2:+46956345 | MS.gene065298:CDS |
GATGGTAATCATGAAACCTC+TGG | 0.606715 | 1.2:+46950377 | MS.gene065298:CDS |
GCAGTTTCTGTCTCACTGTG+CGG | 0.610443 | 1.2:-46950523 | None:intergenic |
GTGATTTGAGACATATCCGC+CGG | 0.610673 | 1.2:+46956217 | MS.gene065298:CDS |
ATAATTCTCAGATCGCACTA+GGG | 0.611148 | 1.2:+46956160 | MS.gene065298:intron |
AGAGGAGCACCAGATTTCCT+GGG | 0.614355 | 1.2:-46950197 | None:intergenic |
AGATGATTCTACAGCACCAG+AGG | 0.614399 | 1.2:-46950393 | None:intergenic |
TAGTGGTGACAACTTTGATA+GGG | 0.616977 | 1.2:+46950751 | MS.gene065298:CDS |
AAGTAGCAGTTTCAGCACCA+GGG | 0.617453 | 1.2:-46956443 | None:intergenic |
AACTTCTTGGAATGATGCCA+CGG | 0.618187 | 1.2:+46956064 | MS.gene065298:CDS |
ATCCCAAGCGAGCCAAACAG+TGG | 0.619472 | 1.2:-46948722 | None:intergenic |
TTTGATGGAGAATGCATGAG+TGG | 0.621786 | 1.2:-46956549 | None:intergenic |
TCTTGGAATGATGCCACGGA+AGG | 0.622900 | 1.2:+46956068 | MS.gene065298:CDS |
CAAAATCGTTATCTCATCCA+GGG | 0.625815 | 1.2:-46949874 | None:intergenic |
CCGTCTTCTAATCACAACCC+TGG | 0.626806 | 1.2:+46956426 | MS.gene065298:CDS |
CCATCAAAGAAAGTATTCCA+AGG | 0.627091 | 1.2:+46956564 | MS.gene065298:CDS |
ATATTCAGACAAGACAGTAT+CGG | 0.630386 | 1.2:+46950621 | MS.gene065298:CDS |
TACTTCTGACCAGAAGAACA+AGG | 0.631653 | 1.2:+46956461 | MS.gene065298:CDS |
AGAACAAGGACAAAGATGAG+AGG | 0.640119 | 1.2:+46956475 | MS.gene065298:CDS |
ATCAAAATATTCTACATCTG+CGG | 0.641197 | 1.2:+46950664 | MS.gene065298:CDS |
AGATGAGAGGGAGGCCATGG+AGG | 0.643015 | 1.2:+46956488 | MS.gene065298:CDS |
CCAGGGTTGTGATTAGAAGA+CGG | 0.645495 | 1.2:-46956426 | None:intergenic |
AGTAGGTTATCAGATGCGGA+TGG | 0.646147 | 1.2:+46950464 | MS.gene065298:CDS |
CGGGGACTTACATTCATCCA+CGG | 0.647503 | 1.2:-46956384 | None:intergenic |
GTTTCTCAGGAACAAAGTCA+AGG | 0.651456 | 1.2:-46956332 | None:intergenic |
TAATTCTCAGATCGCACTAG+GGG | 0.655674 | 1.2:+46956161 | MS.gene065298:intron |
GGAATGAAGTCAAAAGAGCA+GGG | 0.655804 | 1.2:+46950485 | MS.gene065298:CDS |
GCAAGCAGCTCATGGATGTG+CGG | 0.656226 | 1.2:+46950337 | MS.gene065298:CDS |
AGGGCCAGAATCGCAGCCGG+CGG | 0.658158 | 1.2:-46956233 | None:intergenic |
ATTAAGTATAGTGATTATCG+CGG | 0.659081 | 1.2:+46950032 | MS.gene065298:CDS |
ACCGAAGATTACCGACGCGG+TGG | 0.661908 | 1.2:+46948619 | MS.gene065298:CDS |
GAGTTAATAGGTTATCCCCA+AGG | 0.667992 | 1.2:-46950007 | None:intergenic |
ATTCTCAGATCGCACTAGGG+GGG | 0.670913 | 1.2:+46956163 | MS.gene065298:intron |
AGCAGGCATTGACCGGCTGT+AGG | 0.674560 | 1.2:-46956357 | None:intergenic |
AATTCTCAGATCGCACTAGG+GGG | 0.677507 | 1.2:+46956162 | MS.gene065298:intron |
GATTTCACCTCCGAAGACGA+AGG | 0.680908 | 1.2:+46948595 | MS.gene065298:CDS |
TGGAGATTTGCAGAGATACG+TGG | 0.683349 | 1.2:+46949809 | MS.gene065298:intron |
CGGCGTGGTAGCCACCGCGT+CGG | 0.684727 | 1.2:-46948630 | None:intergenic |
CTTGCACTTGACATCAGCTG+AGG | 0.686469 | 1.2:-46950549 | None:intergenic |
TGACAACTTTGATAGGGACG+AGG | 0.691000 | 1.2:+46950757 | MS.gene065298:CDS |
GAGTGCTCAGCATTACACAG+AGG | 0.702864 | 1.2:+46949848 | MS.gene065298:CDS |
TGTCGCCGATTCGAACGGCG+TGG | 0.704175 | 1.2:-46948645 | None:intergenic |
ATTGATGGCTCCAAAAGACG+GGG | 0.725467 | 1.2:-46956402 | None:intergenic |
AAGACAGTATCGGTGCCCAG+AGG | 0.753096 | 1.2:+46950631 | MS.gene065298:CDS |
GGCACCGAAGATTACCGACG+CGG | 0.758285 | 1.2:+46948616 | MS.gene065298:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 46948556 | 46956599 | 46948556 | ID=MS.gene065298 |
chr1.2 | mRNA | 46948556 | 46956599 | 46948556 | ID=MS.gene065298.t1;Parent=MS.gene065298 |
chr1.2 | exon | 46948556 | 46948756 | 46948556 | ID=MS.gene065298.t1.exon1;Parent=MS.gene065298.t1 |
chr1.2 | CDS | 46948556 | 46948756 | 46948556 | ID=cds.MS.gene065298.t1;Parent=MS.gene065298.t1 |
chr1.2 | exon | 46949822 | 46950778 | 46949822 | ID=MS.gene065298.t1.exon2;Parent=MS.gene065298.t1 |
chr1.2 | CDS | 46949822 | 46950778 | 46949822 | ID=cds.MS.gene065298.t1;Parent=MS.gene065298.t1 |
chr1.2 | exon | 46956042 | 46956089 | 46956042 | ID=MS.gene065298.t1.exon3;Parent=MS.gene065298.t1 |
chr1.2 | CDS | 46956042 | 46956089 | 46956042 | ID=cds.MS.gene065298.t1;Parent=MS.gene065298.t1 |
chr1.2 | exon | 46956171 | 46956599 | 46956171 | ID=MS.gene065298.t1.exon4;Parent=MS.gene065298.t1 |
chr1.2 | CDS | 46956171 | 46956599 | 46956171 | ID=cds.MS.gene065298.t1;Parent=MS.gene065298.t1 |
Gene Sequence |
Protein sequence |