AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene09394

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09394.t1 MTR_4g056390 97.606 543 13 0 1 543 1 543 0.0 1109
MS.gene09394.t1 MTR_2g084555 76.723 537 116 4 8 542 9 538 0.0 815
MS.gene09394.t1 MTR_1g061690 67.412 537 155 5 7 536 12 535 0.0 758
MS.gene09394.t1 MTR_5g024270 50.972 463 162 5 18 479 17 415 1.83e-165 477
MS.gene09394.t1 MTR_8g073250 47.835 508 176 7 20 526 19 438 2.24e-163 472
MS.gene09394.t1 MTR_5g024270 49.744 390 131 5 18 406 17 342 6.31e-129 382
MS.gene09394.t1 MTR_3g076540 36.306 157 93 4 24 180 80 229 1.19e-23 103
MS.gene09394.t1 MTR_3g076540 30.769 169 100 3 319 478 259 419 5.81e-18 86.7
MS.gene09394.t1 MTR_3g076540 36.306 157 93 4 24 180 80 229 1.60e-23 103
MS.gene09394.t1 MTR_3g076540 29.379 177 100 4 319 478 259 427 1.96e-15 79.0
MS.gene09394.t1 MTR_3g109390 34.659 176 106 5 5 180 43 209 8.28e-23 100
MS.gene09394.t1 MTR_3g109390 40.196 102 53 2 319 420 238 331 1.14e-17 84.7
MS.gene09394.t1 MTR_4g104620 35.669 157 94 4 24 180 84 233 9.04e-23 101
MS.gene09394.t1 MTR_4g104620 29.586 169 102 3 319 478 263 423 3.11e-16 81.6
MS.gene09394.t1 MTR_3g109390 34.659 176 106 5 5 180 43 209 9.63e-23 100
MS.gene09394.t1 MTR_3g109390 31.609 174 92 3 319 478 238 398 2.20e-22 99.8
MS.gene09394.t1 MTR_3g109390 34.659 176 106 5 5 180 43 209 1.06e-22 100
MS.gene09394.t1 MTR_3g109390 32.184 174 89 4 319 478 238 396 8.43e-22 98.2
MS.gene09394.t1 MTR_3g109390 31.609 174 92 3 319 478 216 376 1.57e-22 100
MS.gene09394.t1 MTR_3g109390 34.659 176 106 5 5 180 21 187 1.77e-22 99.8
MS.gene09394.t1 MTR_3g076540 36.842 152 89 4 29 180 3 147 1.96e-22 99.0
MS.gene09394.t1 MTR_3g076540 30.769 169 100 3 319 478 177 337 2.73e-18 86.7
MS.gene09394.t1 MTR_3g109390 31.609 174 92 3 319 478 225 385 2.08e-22 99.8
MS.gene09394.t1 MTR_3g109390 34.211 152 94 3 29 180 51 196 5.63e-20 92.4
MS.gene09394.t1 MTR_3g109390 31.609 174 92 3 319 478 247 407 4.29e-22 99.0
MS.gene09394.t1 MTR_3g109390 34.211 152 94 3 29 180 73 218 7.27e-20 92.4
MS.gene09394.t1 MTR_4g104620 37.857 140 81 3 41 180 6 139 9.37e-22 97.1
MS.gene09394.t1 MTR_4g104620 29.586 169 102 3 319 478 169 329 1.53e-16 81.3
MS.gene09394.t1 MTR_8g070930 36.879 141 83 3 39 178 139 274 2.85e-21 98.6
MS.gene09394.t1 MTR_8g070930 29.717 212 98 4 317 484 283 487 2.39e-17 86.3
MS.gene09394.t1 MTR_3g086530 31.176 170 107 5 14 180 66 228 4.68e-21 94.4
MS.gene09394.t1 MTR_3g086530 31.176 170 107 5 14 180 66 228 1.01e-20 94.7
MS.gene09394.t1 MTR_3g086530 31.356 118 68 2 319 436 260 364 2.66e-14 75.1
MS.gene09394.t1 MTR_3g086530 31.176 170 107 5 14 180 66 228 1.92e-20 94.4
MS.gene09394.t1 MTR_3g086530 26.554 177 101 4 319 480 260 422 2.12e-15 79.0
MS.gene09394.t1 MTR_3g076540 36.765 136 80 3 45 180 1 130 2.01e-20 92.8
MS.gene09394.t1 MTR_3g076540 30.769 169 100 3 319 478 160 320 2.63e-18 86.7
MS.gene09394.t1 MTR_4g104620 37.500 136 79 3 45 180 1 130 2.77e-20 92.4
MS.gene09394.t1 MTR_4g104620 29.586 169 102 3 319 478 160 320 1.86e-16 80.9
MS.gene09394.t1 MTR_0349s0030 30.964 197 111 4 288 479 109 285 4.26e-20 91.3
MS.gene09394.t1 MTR_6g074905 31.548 168 101 4 317 479 1007 1165 4.50e-20 95.1
MS.gene09394.t1 MTR_5g082700 31.638 177 103 6 317 485 546 712 9.11e-20 93.6
MS.gene09394.t1 MTR_5g082700 36.486 148 85 3 37 180 401 543 1.05e-15 80.9
MS.gene09394.t1 MTR_1g111180 36.264 182 94 7 319 485 822 996 9.10e-18 87.8
MS.gene09394.t1 MTR_1g111180 32.065 184 103 7 1 178 647 814 6.16e-17 85.1
MS.gene09394.t1 MTR_1g111180 36.264 182 94 7 319 485 823 997 9.34e-18 87.4
MS.gene09394.t1 MTR_1g111180 32.065 184 103 7 1 178 648 815 6.33e-17 85.1
MS.gene09394.t1 MTR_3g086530 26.404 178 102 4 318 480 87 250 4.18e-16 79.0
MS.gene09394.t1 MTR_3g086530 26.554 177 101 4 319 480 143 305 7.48e-16 79.0
MS.gene09394.t1 MTR_3g086530 34.483 116 70 3 65 180 2 111 1.38e-15 78.2
MS.gene09394.t1 MTR_5g082700 36.486 148 85 3 37 180 401 543 7.62e-16 80.9
MS.gene09394.t1 MTR_5g082700 36.486 148 85 3 37 180 401 543 1.26e-15 80.5
MS.gene09394.t1 MTR_5g082700 33.621 116 69 3 317 430 546 655 7.86e-13 71.6
MS.gene09394.t1 MTR_4g087620 32.836 201 99 10 284 480 174 342 8.04e-15 76.6
MS.gene09394.t1 MTR_8g098845 31.527 203 100 9 284 480 171 340 2.54e-13 72.0
MS.gene09394.t1 MTR_8g028720 31.000 200 103 8 284 479 156 324 7.74e-13 70.5
MS.gene09394.t1 MTR_4g061320 31.000 200 105 9 284 480 159 328 1.44e-12 69.7
MS.gene09394.t1 MTR_3g089510 32.068 237 127 10 308 535 155 366 1.46e-12 70.5
MS.gene09394.t1 MTR_3g089510 32.068 237 127 10 308 535 143 354 1.58e-12 70.5
MS.gene09394.t1 MTR_4g117490 33.333 219 116 10 308 517 155 352 1.99e-12 70.1
MS.gene09394.t1 MTR_8g080190 30.583 206 125 6 317 518 522 713 2.52e-12 70.1
MS.gene09394.t1 MTR_8g106960 30.594 219 122 10 308 517 248 445 7.20e-12 68.6
MS.gene09394.t1 MTR_4g117490 32.870 216 116 9 308 514 155 350 7.37e-12 68.2
MS.gene09394.t1 MTR_8g106960 30.594 219 122 10 308 517 248 445 8.06e-12 68.2
MS.gene09394.t1 MTR_6g074870 30.201 149 83 3 288 436 220 347 9.09e-12 67.0
MS.gene09394.t1 MTR_5g010030 30.000 200 107 8 284 480 160 329 1.46e-11 66.6
MS.gene09394.t1 MTR_7g078690 29.146 199 108 8 284 479 157 325 4.03e-11 65.1
MS.gene09394.t1 MTR_6g074750 42.857 56 32 0 319 374 58 113 4.37e-11 60.8
MS.gene09394.t1 MTR_2g072840 31.925 213 114 9 308 510 155 346 6.20e-11 65.5
MS.gene09394.t1 MTR_2g072840 30.660 212 118 8 308 510 65 256 6.26e-11 65.1
MS.gene09394.t1 MTR_2g072840 31.925 213 114 9 308 510 155 346 9.00e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09394.t1 AT3G53030 66.792 533 148 7 1 527 1 510 0.0 716
MS.gene09394.t1 AT3G44850 68.571 525 155 4 8 529 14 531 0.0 710
MS.gene09394.t1 AT5G22840 64.516 527 162 4 8 529 14 520 0.0 701
MS.gene09394.t1 AT4G35500 50.417 480 165 5 20 498 19 426 2.52e-166 479
MS.gene09394.t1 AT4G35500 48.441 481 174 6 20 498 19 427 1.05e-156 454
MS.gene09394.t1 AT2G17530 58.974 195 78 1 20 212 19 213 1.14e-78 251
MS.gene09394.t1 AT2G17530 64.286 98 35 0 308 405 245 342 3.51e-38 144
MS.gene09394.t1 AT2G17530 58.974 195 78 1 20 212 19 213 2.43e-77 251
MS.gene09394.t1 AT2G17530 61.628 172 66 0 308 479 245 416 1.80e-75 246
MS.gene09394.t1 AT2G17530 58.974 195 78 1 20 212 19 213 2.43e-77 251
MS.gene09394.t1 AT2G17530 61.628 172 66 0 308 479 245 416 1.80e-75 246
MS.gene09394.t1 AT4G24740 36.628 172 101 5 24 195 84 247 4.79e-25 106
MS.gene09394.t1 AT4G24740 36.628 172 101 5 24 195 84 247 6.34e-25 106
MS.gene09394.t1 AT4G24740 40.230 87 46 1 319 405 263 343 1.22e-14 75.9
MS.gene09394.t1 AT4G24740 36.628 172 101 5 24 195 46 209 1.08e-24 106
MS.gene09394.t1 AT4G24740 30.168 179 90 6 319 479 225 386 1.64e-18 88.2
MS.gene09394.t1 AT4G24740 36.628 172 101 5 24 195 84 247 1.52e-24 106
MS.gene09394.t1 AT4G24740 30.168 179 90 6 319 479 263 424 2.12e-18 88.2
MS.gene09394.t1 AT4G32660 36.478 159 94 4 22 180 55 206 1.03e-23 103
MS.gene09394.t1 AT4G32660 40.594 101 53 3 319 418 235 329 7.31e-15 76.6
MS.gene09394.t1 AT4G32660 36.478 159 94 4 22 180 47 198 1.36e-23 103
MS.gene09394.t1 AT4G32660 33.721 172 96 5 319 480 227 390 1.40e-19 91.3
MS.gene09394.t1 AT4G32660 36.478 159 94 4 22 180 55 206 1.63e-23 103
MS.gene09394.t1 AT4G32660 33.721 172 96 5 319 480 235 398 1.41e-19 91.7
MS.gene09394.t1 AT5G35980 36.913 149 88 3 39 186 87 230 5.98e-23 103
MS.gene09394.t1 AT5G35980 29.762 252 118 7 317 521 230 469 1.88e-18 89.7
MS.gene09394.t1 AT5G35980 36.913 149 88 3 39 186 122 265 7.12e-23 103
MS.gene09394.t1 AT5G35980 29.762 252 118 7 317 521 265 504 1.57e-18 90.1
MS.gene09394.t1 AT5G35980 36.913 149 88 3 39 186 122 265 9.83e-23 103
MS.gene09394.t1 AT5G35980 29.762 252 118 7 317 521 265 504 1.25e-18 90.1
MS.gene09394.t1 AT4G24740 37.086 151 88 4 45 195 1 144 1.74e-22 97.1
MS.gene09394.t1 AT4G24740 40.230 87 46 1 319 405 160 240 4.66e-15 75.5
MS.gene09394.t1 AT1G73450 32.738 168 99 4 317 479 986 1144 4.73e-22 101
MS.gene09394.t1 AT1G73450 34.459 148 88 4 37 180 839 981 1.03e-13 74.7
MS.gene09394.t1 AT1G73460 32.738 168 99 4 317 479 1003 1161 4.89e-22 101
MS.gene09394.t1 AT1G73460 34.459 148 88 4 37 180 856 998 1.08e-13 74.7
MS.gene09394.t1 AT1G73460 32.738 168 99 4 317 479 1003 1161 4.89e-22 101
MS.gene09394.t1 AT1G73460 34.459 148 88 4 37 180 856 998 1.08e-13 74.7
MS.gene09394.t1 AT4G24740 37.086 151 88 4 45 195 1 144 5.09e-22 97.4
MS.gene09394.t1 AT4G24740 30.168 179 90 6 319 479 160 321 8.13e-19 88.2
MS.gene09394.t1 AT4G24740 37.086 151 88 4 45 195 1 144 5.09e-22 97.4
MS.gene09394.t1 AT4G24740 30.168 179 90 6 319 479 160 321 8.13e-19 88.2
MS.gene09394.t1 AT4G24740 37.086 151 88 4 45 195 1 144 5.09e-22 97.4
MS.gene09394.t1 AT4G24740 30.168 179 90 6 319 479 160 321 8.13e-19 88.2
MS.gene09394.t1 AT2G40120 32.934 167 102 4 318 481 407 566 3.50e-21 97.8
MS.gene09394.t1 AT2G40120 34.459 148 88 3 37 180 259 401 3.15e-14 75.9
MS.gene09394.t1 AT3G53570 35.032 157 95 4 24 180 101 250 3.85e-21 97.1
MS.gene09394.t1 AT3G53570 30.814 172 101 4 318 479 281 444 1.26e-19 92.4
MS.gene09394.t1 AT3G53570 35.032 157 95 4 24 180 101 250 3.85e-21 97.1
MS.gene09394.t1 AT3G53570 30.814 172 101 4 318 479 281 444 1.26e-19 92.4
MS.gene09394.t1 AT3G53570 35.032 157 95 4 24 180 101 250 3.85e-21 97.1
MS.gene09394.t1 AT3G53570 30.814 172 101 4 318 479 281 444 1.26e-19 92.4
MS.gene09394.t1 AT3G53570 35.032 157 95 4 24 180 87 236 4.36e-21 96.7
MS.gene09394.t1 AT3G53570 30.814 172 101 4 318 479 267 430 1.38e-19 92.0
MS.gene09394.t1 AT3G53570 35.032 157 95 4 24 180 87 236 4.36e-21 96.7
MS.gene09394.t1 AT3G53570 30.814 172 101 4 318 479 267 430 1.38e-19 92.0
MS.gene09394.t1 AT3G17750 31.548 168 101 4 317 479 972 1130 4.99e-20 94.7
MS.gene09394.t1 AT3G17750 34.459 148 88 4 37 180 825 967 2.53e-13 73.6
MS.gene09394.t1 AT4G32660 33.526 173 97 5 319 481 123 287 5.12e-20 90.9
MS.gene09394.t1 AT4G32660 36.000 100 58 3 81 180 1 94 1.77e-12 68.6
MS.gene09394.t1 AT4G24740 30.168 179 90 6 319 479 57 218 1.03e-19 88.6
MS.gene09394.t1 AT4G24740 30.168 179 90 6 319 479 57 218 1.03e-19 88.6
MS.gene09394.t1 AT3G53640 33.333 180 94 7 319 480 470 641 2.65e-17 85.9
MS.gene09394.t1 AT3G53640 30.220 182 107 6 3 179 297 463 1.00e-13 74.3
MS.gene09394.t1 AT1G13350 33.540 161 96 5 24 179 428 582 1.89e-16 83.2
MS.gene09394.t1 AT1G13350 30.899 178 101 5 319 480 589 760 4.45e-16 82.0
MS.gene09394.t1 AT3G25840 33.333 186 87 8 318 480 763 934 2.07e-16 83.2
MS.gene09394.t1 AT3G25840 32.716 162 96 6 24 179 603 757 2.32e-14 76.6
MS.gene09394.t1 AT3G25840 33.333 186 87 8 318 480 501 672 2.47e-16 82.8
MS.gene09394.t1 AT3G25840 31.677 161 99 5 24 179 341 495 6.17e-14 75.1
MS.gene09394.t1 AT1G13350 33.540 161 96 5 24 179 455 609 2.84e-16 82.8
MS.gene09394.t1 AT1G13350 30.899 178 101 5 319 480 616 787 5.52e-16 81.6
MS.gene09394.t1 AT1G13350 33.540 161 96 5 24 179 501 655 4.52e-16 82.0
MS.gene09394.t1 AT1G13350 30.899 178 101 5 319 480 662 833 6.14e-16 81.6
MS.gene09394.t1 AT3G59790 29.741 232 118 10 284 506 179 374 3.90e-14 74.7
MS.gene09394.t1 AT3G45640 32.000 200 101 9 284 479 157 325 4.17e-13 71.2
MS.gene09394.t1 AT1G01560 30.151 199 106 9 284 479 159 327 7.19e-13 70.9
MS.gene09394.t1 AT3G14720 31.132 212 117 8 308 510 155 346 1.04e-12 71.2
MS.gene09394.t1 AT4G01370 30.653 199 105 9 284 479 162 330 1.96e-12 69.3
MS.gene09394.t1 AT3G14720 31.604 212 116 8 308 510 155 346 2.26e-12 69.7
MS.gene09394.t1 AT3G14720 31.604 212 116 8 308 510 155 346 2.26e-12 69.7
MS.gene09394.t1 AT2G43790 31.343 201 102 9 284 480 182 350 3.95e-12 68.6
MS.gene09394.t1 AT2G01450 31.797 217 117 11 308 514 146 341 9.07e-12 67.8
MS.gene09394.t1 AT2G01450 31.797 217 117 11 308 514 146 341 9.07e-12 67.8
MS.gene09394.t1 AT2G01450 31.797 217 117 11 308 514 146 341 9.07e-12 67.8
MS.gene09394.t1 AT2G01450 31.797 217 117 11 308 514 146 341 9.07e-12 67.8
MS.gene09394.t1 AT2G46070 32.927 164 90 8 319 479 182 328 1.92e-11 66.2
MS.gene09394.t1 AT2G46070 32.927 164 90 8 319 479 216 362 2.11e-11 66.2
MS.gene09394.t1 AT3G18040 30.909 220 120 11 308 517 262 459 5.43e-11 65.9
MS.gene09394.t1 AT3G18040 30.594 219 122 10 308 517 65 262 5.69e-11 65.1
MS.gene09394.t1 AT3G18040 30.909 220 120 11 308 517 153 350 5.86e-11 65.5
MS.gene09394.t1 AT3G18040 30.909 220 120 11 308 517 148 345 6.18e-11 65.5
MS.gene09394.t1 AT3G18040 30.909 220 120 11 308 517 262 459 7.85e-11 65.1

Find 130 sgRNAs with CRISPR-Local

Find 313 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATCCAAAACAGTAAAAT+TGG 0.157415 4.1:+41506303 MS.gene09394:CDS
TTGGATCACTTTAAGCATTC+AGG 0.213003 4.1:+41505988 MS.gene09394:CDS
ACCTTTACTCGAAGAGCTAT+TGG 0.245290 4.1:-41506499 None:intergenic
CATCTATGTTGATGACTTTA+CGG 0.264587 4.1:-41508849 None:intergenic
TTTCCACTGTTTGGCTTGCT+TGG 0.266127 4.1:+41504691 MS.gene09394:CDS
AAGTGCAAGCTGGTTGATTT+TGG 0.274103 4.1:+41506624 MS.gene09394:CDS
TTCTTATGACTGTCGTTTCC+TGG 0.298809 4.1:-41506555 None:intergenic
AGGTGTCCTGAGGTTCTTCT+TGG 0.337399 4.1:+41506702 MS.gene09394:CDS
TTCCACTGTTTGGCTTGCTT+GGG 0.339140 4.1:+41504692 MS.gene09394:CDS
ACGGAAAGTCCAGAGGAATC+TGG 0.359071 4.1:+41506402 MS.gene09394:CDS
GTGAGGAATATATCTATTAA+TGG 0.359774 4.1:+41508797 MS.gene09394:CDS
AAAATGTGTTGTGAAGCTTT+TGG 0.362109 4.1:+41505969 MS.gene09394:CDS
TGTTCAATCTAAGCTTGGTT+GGG 0.363107 4.1:+41504662 MS.gene09394:CDS
ACTGCCTCATTCTTCGTGTT+TGG 0.363420 4.1:-41506267 None:intergenic
CCTTTACTCGAAGAGCTATT+GGG 0.368968 4.1:-41506498 None:intergenic
ATCTATGTTGATGACTTTAC+GGG 0.386093 4.1:-41508848 None:intergenic
ACATCCGTGAGTTGCGATTC+TGG 0.392267 4.1:+41508507 MS.gene09394:CDS
GATTTCCTTGGATCCTTTGA+CGG 0.395707 4.1:-41506225 None:intergenic
GGAGAAGAAAATGAAGGAAA+AGG 0.402879 4.1:+41506350 MS.gene09394:CDS
GCATTGATGATGGAACTTCT+TGG 0.403191 4.1:+41508172 MS.gene09394:CDS
TTTAAGCATTCAGGGCCTAA+TGG 0.413755 4.1:+41505997 MS.gene09394:CDS
ATATTCAAACAAGGCAATAT+AGG 0.414165 4.1:+41506682 MS.gene09394:CDS
TGGATCACTTTAAGCATTCA+GGG 0.416974 4.1:+41505989 MS.gene09394:CDS
ATCTGCTTTGAGCTTGCTAC+TGG 0.418896 4.1:+41506768 MS.gene09394:CDS
CGGAAAGTCCAGAGGAATCT+GGG 0.423521 4.1:+41506403 MS.gene09394:CDS
ATAGTGGTGACAACTATGAT+AGG 0.423936 4.1:+41506811 MS.gene09394:CDS
GATAGTCACTATATTTGATA+AGG 0.433753 4.1:-41506068 None:intergenic
GGACAAGGAAAAGGCCGAGC+AGG 0.434320 4.1:+41508757 MS.gene09394:CDS
AAATGAAGGAAAAGGGTAAG+AGG 0.436550 4.1:+41506358 MS.gene09394:CDS
TTCTTCTCCTGGTTCTTCGT+CGG 0.444681 4.1:-41506336 None:intergenic
CCCAATAGCTCTTCGAGTAA+AGG 0.452480 4.1:+41506498 MS.gene09394:CDS
AATTGTAACAATGTGAAATC+TGG 0.453181 4.1:+41506453 MS.gene09394:CDS
TCAAAGGATCCAAGGAAATC+AGG 0.454737 4.1:+41506228 MS.gene09394:CDS
GATAAGTTTCCTACCTTGCT+AGG 0.455024 4.1:-41508202 None:intergenic
TTCGTGTTTGGAAGGATAAG+TGG 0.458807 4.1:-41506255 None:intergenic
CAATCCTCCCCAGATTCCTC+TGG 0.462270 4.1:-41506411 None:intergenic
GAATGCTCATTGATTGCATC+AGG 0.462979 4.1:-41508716 None:intergenic
TAATGGCGTGCATGTGTGTA+TGG 0.464665 4.1:+41506014 MS.gene09394:CDS
GTTCAATCTAAGCTTGGTTG+GGG 0.469698 4.1:+41504663 MS.gene09394:CDS
GAATGAAGTAACACATTCTC+AGG 0.471207 4.1:-41506192 None:intergenic
TGCCAGCAGCTTCTTTCTCA+TGG 0.472338 4.1:-41506589 None:intergenic
TTATCCAAAACAGTAAAATT+GGG 0.472361 4.1:+41506304 MS.gene09394:CDS
TGTTGATGACTTTACGGGTC+GGG 0.473456 4.1:-41508843 None:intergenic
TCAGGGTCAAAATCAAGTAT+TGG 0.476440 4.1:-41508605 None:intergenic
TATGTTGTTCAATCTAAGCT+TGG 0.476981 4.1:+41504657 MS.gene09394:CDS
TTGAAGTGAATGGAGAGAAA+AGG 0.480238 4.1:+41504534 None:intergenic
AGTGGAGCACCTGATTTCCT+TGG 0.486223 4.1:-41506237 None:intergenic
ATAGTCACTATATTTGATAA+GGG 0.487347 4.1:-41506067 None:intergenic
TTCCTGCAGATTGCACTTGG+TGG 0.488149 4.1:+41508440 MS.gene09394:intron
GAGAAGAAAATGAAGGAAAA+GGG 0.488899 4.1:+41506351 MS.gene09394:CDS
TTGTTCAATCTAAGCTTGGT+TGG 0.493944 4.1:+41504661 MS.gene09394:CDS
GGATCATCTGGCATTGATGA+TGG 0.496553 4.1:+41508162 MS.gene09394:intron
ATCAACACAGACTATTGAAA+AGG 0.498885 4.1:+41506524 MS.gene09394:CDS
GCAAAGGACCACATATCTGC+TGG 0.503873 4.1:-41506741 None:intergenic
ATGAAGGTACTGAACACTAT+AGG 0.505840 4.1:+41504583 MS.gene09394:CDS
TGGAGATCCGACGAAGAACC+AGG 0.506120 4.1:+41506329 MS.gene09394:CDS
GAGAAGGAAGGACAAGGAAA+AGG 0.507421 4.1:+41508748 MS.gene09394:CDS
CCTCATTCTTCGTGTTTGGA+AGG 0.508375 4.1:-41506263 None:intergenic
CTCAGTGCCTTACCCATCCA+TGG 0.510371 4.1:+41508645 MS.gene09394:CDS
GACTGTCGTTTCCTGGTGCA+AGG 0.511294 4.1:-41506548 None:intergenic
AGCATTCATTTGAAAAGAGA+AGG 0.511517 4.1:+41508732 MS.gene09394:CDS
CAAAACAGTAAAATTGGGAA+TGG 0.514220 4.1:+41506309 MS.gene09394:CDS
TATTTCCTGCAGATTGCACT+TGG 0.517054 4.1:+41508437 MS.gene09394:intron
CAAAATCAAGTATTGGAAGA+AGG 0.523920 4.1:-41508598 None:intergenic
AAAGGCCGAGCAGGAGTTGG+TGG 0.524206 4.1:+41508766 MS.gene09394:CDS
TTGTTACAATTATCCCGCTC+GGG 0.530339 4.1:-41506441 None:intergenic
GAACCAGGAGAAGAAAATGA+AGG 0.531870 4.1:+41506344 MS.gene09394:CDS
GAGCAGGAGTTGGTGGAAGT+TGG 0.533978 4.1:+41508773 MS.gene09394:CDS
CACTTATCCATGGATGGGTA+AGG 0.534938 4.1:-41508652 None:intergenic
TGCTTGGGATACTCTCAAAT+CGG 0.534960 4.1:+41504707 MS.gene09394:CDS
GGAAAAGGCCGAGCAGGAGT+TGG 0.538465 4.1:+41508763 MS.gene09394:CDS
GACCTGCACTTATCCATGGA+TGG 0.540258 4.1:-41508658 None:intergenic
ACCCATCCATGGATAAGTGC+AGG 0.542820 4.1:+41508656 MS.gene09394:CDS
AATGAAGGAAAAGGGTAAGA+GGG 0.543037 4.1:+41506359 MS.gene09394:CDS
TTCACTGATTGATCCGTCAA+AGG 0.543734 4.1:+41506212 MS.gene09394:CDS
ATACACACATGCACGCCATT+AGG 0.544060 4.1:-41506012 None:intergenic
ACACTACACTGAAGCTGCAA+TGG 0.544944 4.1:+41505897 MS.gene09394:CDS
ATTGAAAAGGACCTTGCACC+AGG 0.547883 4.1:+41506537 MS.gene09394:CDS
CTTGGTGATGCTTTCAACAA+TGG 0.554279 4.1:+41504630 MS.gene09394:CDS
TCATAGTTGTCACCACTATG+AGG 0.558782 4.1:-41506807 None:intergenic
GGCTCAAGGTTGTGTTGAGA+CGG 0.558886 4.1:+41506383 MS.gene09394:CDS
TTCATTTGAAAAGAGAAGGA+AGG 0.562994 4.1:+41508736 MS.gene09394:CDS
GCAGCTTCTTTCTCATGGAA+CGG 0.565762 4.1:-41506584 None:intergenic
CGAGGACCTGCACTTATCCA+TGG 0.565971 4.1:-41508662 None:intergenic
TTAGAACCAAGAAGAACCTC+AGG 0.569982 4.1:-41506708 None:intergenic
GGGTACCATGCTGTGAAACT+TGG 0.570597 4.1:+41504612 MS.gene09394:CDS
TTCCATGAGAAAGAAGCTGC+TGG 0.571340 4.1:+41506587 MS.gene09394:CDS
ACCTGCACTTATCCATGGAT+GGG 0.571534 4.1:-41508657 None:intergenic
ATTGTTACAATTATCCCGCT+CGG 0.571831 4.1:-41506442 None:intergenic
CCTTCCAAACACGAAGAATG+AGG 0.577418 4.1:+41506263 MS.gene09394:CDS
ACTCAACTCCAGCAGATATG+TGG 0.578886 4.1:+41506733 MS.gene09394:CDS
TGTTGATCTTAAGTGCAAGC+TGG 0.579496 4.1:+41506614 MS.gene09394:CDS
AGTGAGGGCTCAAGAGTTCG+AGG 0.586270 4.1:-41508680 None:intergenic
ATTCTCAAACAAATTGAAGA+GGG 0.586563 4.1:+41505931 MS.gene09394:CDS
TCGGCCAGAATCGCAACTCA+CGG 0.588389 4.1:-41508511 None:intergenic
TCAATAGACATGGTGACTTG+AGG 0.591641 4.1:+41508483 MS.gene09394:CDS
CTGAACACTATAGGCGTGGT+GGG 0.591727 4.1:+41504592 MS.gene09394:CDS
TAGTGGTGACAACTATGATA+GGG 0.596223 4.1:+41506812 MS.gene09394:CDS
CTCAAAGCAGATGCAAGCAA+AGG 0.596681 4.1:-41506757 None:intergenic
GATTCTCAAACAAATTGAAG+AGG 0.602574 4.1:+41505930 MS.gene09394:CDS
TCGTGGAGTTCCTCTCTCGA+TGG 0.611246 4.1:+41506089 MS.gene09394:CDS
AAGGGTAAGAGGGTGGCTCA+AGG 0.611541 4.1:+41506369 MS.gene09394:CDS
GATTACAGTTCAGAAGATGA+AGG 0.613227 4.1:+41504567 MS.gene09394:CDS
TTGATCCGTCAAAGGATCCA+AGG 0.613694 4.1:+41506220 MS.gene09394:CDS
GTAAGGCACTGAGCAGCTGT+TGG 0.614457 4.1:-41508635 None:intergenic
GGATTGTAAAGAACCCGAGC+GGG 0.616618 4.1:+41506428 MS.gene09394:CDS
AACTTCCACCAACTCCTGCT+CGG 0.617085 4.1:-41508771 None:intergenic
TCTTGGAAAGATGCCTAGCA+AGG 0.623101 4.1:+41508189 MS.gene09394:CDS
ATCAAATATAGTGACTATCG+TGG 0.632403 4.1:+41506072 MS.gene09394:CDS
ATGTTGATGACTTTACGGGT+CGG 0.635713 4.1:-41508844 None:intergenic
TGACAACTATGATAGGGATG+AGG 0.636106 4.1:+41506818 MS.gene09394:CDS
ATCCCAAGCAAGCCAAACAG+TGG 0.637762 4.1:-41504694 None:intergenic
ATCTCTTTAACCATCGAGAG+AGG 0.639855 4.1:-41506099 None:intergenic
TGAAAAGAGAAGGAAGGACA+AGG 0.644229 4.1:+41508742 MS.gene09394:CDS
CATCACCAAGTTTCACAGCA+TGG 0.653174 4.1:-41504617 None:intergenic
TGTGTATGACAGATAGCTCA+CGG 0.656661 4.1:-41506158 None:intergenic
ACTGAACACTATAGGCGTGG+TGG 0.658178 4.1:+41504591 MS.gene09394:CDS
AAGTCCAGAGGAATCTGGGG+AGG 0.664190 4.1:+41506407 MS.gene09394:CDS
AGGTTGTGTACTAGTCAGTG+AGG 0.667251 4.1:-41508696 None:intergenic
GGTTGTGTACTAGTCAGTGA+GGG 0.667334 4.1:-41508695 None:intergenic
GGGTGAGAAGATTATCACCA+AGG 0.668408 4.1:-41506047 None:intergenic
GGAAAGTCCAGAGGAATCTG+GGG 0.683129 4.1:+41506404 MS.gene09394:CDS
GGTACTGAACACTATAGGCG+TGG 0.685157 4.1:+41504588 MS.gene09394:CDS
TGTTGAGACGGAAAGTCCAG+AGG 0.685820 4.1:+41506395 MS.gene09394:CDS
GAAGGAAAAGGGTAAGAGGG+TGG 0.689632 4.1:+41506362 MS.gene09394:CDS
TCACAAATGATATTCAAACA+AGG 0.699139 4.1:+41506673 MS.gene09394:CDS
TGAACAAGATGCAAATGACA+TGG 0.700027 4.1:+41508568 MS.gene09394:CDS
AGTTGGTGGAAGTTGGTGTG+AGG 0.701503 4.1:+41508780 MS.gene09394:CDS
AAGGCAATATAGGTGTCCTG+AGG 0.731682 4.1:+41506692 MS.gene09394:CDS
AGGATTGTAAAGAACCCGAG+CGG 0.733943 4.1:+41506427 MS.gene09394:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAAACTTTATATCATA+TGG - chr4.1:41507938-41507957 None:intergenic 10.0%
!! ATATAAACTTTATATCATAT+GGG - chr4.1:41507937-41507956 None:intergenic 10.0%
!!! GAAAATTTTGAATAAATAAT+TGG + chr4.1:41507881-41507900 MS.gene09394:intron 10.0%
!! AAAACAAAAACAAACAAAAA+AGG - chr4.1:41504770-41504789 None:intergenic 15.0%
!! ATAAATTAAAGAGATAGATA+TGG + chr4.1:41508028-41508047 MS.gene09394:intron 15.0%
!! TAAATTAAAGAGATAGATAT+GGG + chr4.1:41508029-41508048 MS.gene09394:intron 15.0%
!! TTCAAAATGCAAAATATATA+GGG + chr4.1:41504994-41505013 MS.gene09394:intron 15.0%
!!! ATGATATTTATTTGTTTTAC+AGG + chr4.1:41508141-41508160 MS.gene09394:intron 15.0%
!!! GAAACTTTTAATTAAGTTAA+AGG + chr4.1:41507312-41507331 MS.gene09394:intron 15.0%
!!! TATTTTTTTAAATGACAACA+AGG - chr4.1:41507251-41507270 None:intergenic 15.0%
!!! TTCATCTAAAATAAAGATAA+AGG + chr4.1:41507281-41507300 MS.gene09394:intron 15.0%
!!! TTTTTGTTTGTTTTTGTTTT+TGG + chr4.1:41504770-41504789 MS.gene09394:intron 15.0%
!! AAACAATGAACTAGTTAAAA+AGG - chr4.1:41504742-41504761 None:intergenic 20.0%
!! AAAGAGAAAATAGTATGTTT+AGG - chr4.1:41507627-41507646 None:intergenic 20.0%
!! AAGAGAAAATAGTATGTTTA+GGG - chr4.1:41507626-41507645 None:intergenic 20.0%
!! AATAACCAACCAAAAATTTA+AGG - chr4.1:41506999-41507018 None:intergenic 20.0%
!! AATAAGCAAAACAATTGTAA+AGG - chr4.1:41505599-41505618 None:intergenic 20.0%
!! AGAAAGTAATTTAGTAAAGT+CGG - chr4.1:41507374-41507393 None:intergenic 20.0%
!! ATAGTCACTATATTTGATAA+GGG - chr4.1:41506070-41506089 None:intergenic 20.0%
!! ATTATCCAAAACAGTAAAAT+TGG + chr4.1:41506303-41506322 MS.gene09394:CDS 20.0%
!! ATTGTAATAACCTTGAAAAT+AGG + chr4.1:41505208-41505227 MS.gene09394:intron 20.0%
!! CGTAAAAAAACAAAACAATA+GGG + chr4.1:41508357-41508376 MS.gene09394:intron 20.0%
!! GGAAAACAAAAAAAAAAACT+AGG + chr4.1:41505183-41505202 MS.gene09394:intron 20.0%
!! GTTCAAAATGCAAAATATAT+AGG + chr4.1:41504993-41505012 MS.gene09394:intron 20.0%
!! TTATCCAAAACAGTAAAATT+GGG + chr4.1:41506304-41506323 MS.gene09394:CDS 20.0%
!!! AAAAGTTAAATGCTACATTT+TGG + chr4.1:41507400-41507419 MS.gene09394:intron 20.0%
!!! ATACAACTTTTTTATGGTTT+TGG + chr4.1:41507204-41507223 MS.gene09394:intron 20.0%
!!! ATATGTTTTCATGTTATAGT+GGG + chr4.1:41506120-41506139 MS.gene09394:CDS 20.0%
!!! ATCTTTATTTTAGATGAACA+AGG - chr4.1:41507279-41507298 None:intergenic 20.0%
!!! GGTGTAAAAAGATTTTTTTA+GGG + chr4.1:41504970-41504989 MS.gene09394:intron 20.0%
!!! GTGTAAAAAGATTTTTTTAG+GGG + chr4.1:41504971-41504990 MS.gene09394:intron 20.0%
!!! TACAACTTTTTTATGGTTTT+GGG + chr4.1:41507205-41507224 MS.gene09394:intron 20.0%
!!! TGGTGTAAAAAGATTTTTTT+AGG + chr4.1:41504969-41504988 MS.gene09394:intron 20.0%
!!! TTTTGATGCATATTTACTAA+AGG - chr4.1:41505517-41505536 None:intergenic 20.0%
!!! TTTTTTTTTTTGTTTTCCGT+AGG - chr4.1:41505181-41505200 None:intergenic 20.0%
! AAAAAATATGCAACTGCATA+TGG - chr4.1:41505303-41505322 None:intergenic 25.0%
! AAAATTTGAAAAGAATGCCT+TGG + chr4.1:41508084-41508103 MS.gene09394:intron 25.0%
! AAATCCAAAAATATCAGGTA+AGG - chr4.1:41505802-41505821 None:intergenic 25.0%
! AATCCAAAAATATCAGGTAA+GGG - chr4.1:41505801-41505820 None:intergenic 25.0%
! AATTGTAACAATGTGAAATC+TGG + chr4.1:41506453-41506472 MS.gene09394:CDS 25.0%
! ACAATGTGAGATACTATTAT+GGG + chr4.1:41507539-41507558 MS.gene09394:intron 25.0%
! AGAGAAAATAGTATGTTTAG+GGG - chr4.1:41507625-41507644 None:intergenic 25.0%
! ATAATACAAAGGATTTGTCT+AGG + chr4.1:41507580-41507599 MS.gene09394:intron 25.0%
! ATATTCAAACAAGGCAATAT+AGG + chr4.1:41506682-41506701 MS.gene09394:CDS 25.0%
! ATGTCTATTGAAAAAATCTC+GGG - chr4.1:41508474-41508493 None:intergenic 25.0%
! ATTCTCAAACAAATTGAAGA+GGG + chr4.1:41505931-41505950 MS.gene09394:CDS 25.0%
! CAATTTATGTAAATCGTAAG+AGG - chr4.1:41507965-41507984 None:intergenic 25.0%
! CATGTCTATTGAAAAAATCT+CGG - chr4.1:41508475-41508494 None:intergenic 25.0%
! CTTGAAAATAGGAAGTAAAA+TGG + chr4.1:41505219-41505238 MS.gene09394:intron 25.0%
! GACAAGCATGATAATATTAT+TGG - chr4.1:41507660-41507679 None:intergenic 25.0%
! GATAGTCACTATATTTGATA+AGG - chr4.1:41506071-41506090 None:intergenic 25.0%
! GCGTAAAAAAACAAAACAAT+AGG + chr4.1:41508356-41508375 MS.gene09394:intron 25.0%
! GGCTTAGTAAAATAATACAA+AGG + chr4.1:41507569-41507588 MS.gene09394:intron 25.0%
! GTAGAAATAGTAATCAATGT+GGG + chr4.1:41504881-41504900 MS.gene09394:intron 25.0%
! GTGAGGAATATATCTATTAA+TGG + chr4.1:41508797-41508816 MS.gene09394:CDS 25.0%
! TATTGTTGATCTTAGAATTG+AGG + chr4.1:41507828-41507847 MS.gene09394:intron 25.0%
! TCACAAATGATATTCAAACA+AGG + chr4.1:41506673-41506692 MS.gene09394:CDS 25.0%
! TCGTAATTTCGTAATTACAA+TGG - chr4.1:41504848-41504867 None:intergenic 25.0%
! TGTAGAAATAGTAATCAATG+TGG + chr4.1:41504880-41504899 MS.gene09394:intron 25.0%
! TTCAGAAATCCAAAAATATC+AGG - chr4.1:41505807-41505826 None:intergenic 25.0%
! TTTGAACAGAAAATCGTTAA+AGG - chr4.1:41507069-41507088 None:intergenic 25.0%
!! ATCTAACATGGGATTATTTT+CGG + chr4.1:41505146-41505165 MS.gene09394:intron 25.0%
!! ATGATTGTAAAAGCATGAAA+AGG - chr4.1:41507040-41507059 None:intergenic 25.0%
!! CATTTTACTTCCTATTTTCA+AGG - chr4.1:41505221-41505240 None:intergenic 25.0%
!! CTCTTTTGTCCTTAAATTTT+TGG + chr4.1:41506987-41507006 MS.gene09394:intron 25.0%
!! GATATGTTTTCATGTTATAG+TGG + chr4.1:41506119-41506138 MS.gene09394:CDS 25.0%
!! TCATATAAGAGTCTGTATTT+TGG + chr4.1:41505379-41505398 MS.gene09394:intron 25.0%
!!! ATGCAGTTGCATATTTTTTT+TGG + chr4.1:41505304-41505323 MS.gene09394:intron 25.0%
!!! ATTGCTATTTTGCAAATTTG+AGG + chr4.1:41505665-41505684 MS.gene09394:intron 25.0%
!!! ATTGCTTTTTAAAGTTTAGG+GGG + chr4.1:41505027-41505046 MS.gene09394:intron 25.0%
!!! CAATTCTAAGATCAACAATA+GGG - chr4.1:41507828-41507847 None:intergenic 25.0%
!!! CATTGCTTTTTAAAGTTTAG+GGG + chr4.1:41505026-41505045 MS.gene09394:intron 25.0%
!!! GCATTGCTTTTTAAAGTTTA+GGG + chr4.1:41505025-41505044 MS.gene09394:intron 25.0%
!!! GTTCAAACTTTTGAGTTATA+GGG + chr4.1:41504942-41504961 MS.gene09394:intron 25.0%
!!! TAAAGGAATATTTTGATGCA+GGG - chr4.1:41505500-41505519 None:intergenic 25.0%
!!! TAGTTTTTTAGTACGAAACA+GGG - chr4.1:41506851-41506870 None:intergenic 25.0%
!!! TCAATTCTAAGATCAACAAT+AGG - chr4.1:41507829-41507848 None:intergenic 25.0%
!!! TGCATTGCTTTTTAAAGTTT+AGG + chr4.1:41505024-41505043 MS.gene09394:intron 25.0%
!!! TTGCTATTTCATATGTTTGA+GGG - chr4.1:41505438-41505457 None:intergenic 25.0%
!!! TTGCTATTTTGCAAATTTGA+GGG + chr4.1:41505666-41505685 MS.gene09394:intron 25.0%
!!! TTTGCTATTTCATATGTTTG+AGG - chr4.1:41505439-41505458 None:intergenic 25.0%
!!! TTTGTCCTTAAATTTTTGGT+TGG + chr4.1:41506991-41507010 MS.gene09394:intron 25.0%
AAAGCATATTCCACAAGAAT+GGG - chr4.1:41508064-41508083 None:intergenic 30.0%
AAATAGTAATCAATGTGGGT+TGG + chr4.1:41504885-41504904 MS.gene09394:intron 30.0%
AAATTCCTGTTGAAACAAAC+AGG - chr4.1:41507772-41507791 None:intergenic 30.0%
AATAGTAATCAATGTGGGTT+GGG + chr4.1:41504886-41504905 MS.gene09394:intron 30.0%
AATATATGCAAAACTGTACC+AGG - chr4.1:41507341-41507360 None:intergenic 30.0%
AGCATTCATTTGAAAAGAGA+AGG + chr4.1:41508732-41508751 MS.gene09394:CDS 30.0%
ATAAAAAAGTTGTATGCTGC+TGG - chr4.1:41507199-41507218 None:intergenic 30.0%
ATATATGCAAAACTGTACCA+GGG - chr4.1:41507340-41507359 None:intergenic 30.0%
ATCAAATATAGTGACTATCG+TGG + chr4.1:41506072-41506091 MS.gene09394:CDS 30.0%
ATCAACACAGACTATTGAAA+AGG + chr4.1:41506524-41506543 MS.gene09394:CDS 30.0%
ATTGACGTTCTTCAATGAAA+AGG - chr4.1:41505468-41505487 None:intergenic 30.0%
CAAAACAGTAAAATTGGGAA+TGG + chr4.1:41506309-41506328 MS.gene09394:CDS 30.0%
CAATGTGAGATACTATTATG+GGG + chr4.1:41507540-41507559 MS.gene09394:intron 30.0%
CCACTTATTAAGCTAAATTC+AGG - chr4.1:41508113-41508132 None:intergenic 30.0%
GACAATGTGAGATACTATTA+TGG + chr4.1:41507538-41507557 MS.gene09394:intron 30.0%
GAGAAAATAGTATGTTTAGG+GGG - chr4.1:41507624-41507643 None:intergenic 30.0%
GAGAAGAAAATGAAGGAAAA+GGG + chr4.1:41506351-41506370 MS.gene09394:CDS 30.0%
GATTCTCAAACAAATTGAAG+AGG + chr4.1:41505930-41505949 MS.gene09394:CDS 30.0%
TAAAGCATATTCCACAAGAA+TGG - chr4.1:41508065-41508084 None:intergenic 30.0%
TAGTCCCTAAAATCAAACAT+CGG - chr4.1:41505644-41505663 None:intergenic 30.0%
TATAGCTTAAGCAAAGCTTT+CGG - chr4.1:41507499-41507518 None:intergenic 30.0%
TATGTTGAGTCAAATCTTCT+AGG - chr4.1:41508011-41508030 None:intergenic 30.0%
TATGTTGTTCAATCTAAGCT+TGG + chr4.1:41504657-41504676 MS.gene09394:CDS 30.0%
TCTGAACTCTGTTAATGATT+TGG + chr4.1:41505821-41505840 MS.gene09394:intron 30.0%
TGGAACTGGAAAATATAATG+TGG + chr4.1:41507735-41507754 MS.gene09394:intron 30.0%
TTCATTTGAAAAGAGAAGGA+AGG + chr4.1:41508736-41508755 MS.gene09394:CDS 30.0%
TTGACGTTCTTCAATGAAAA+GGG - chr4.1:41505467-41505486 None:intergenic 30.0%
! AAAATGTGTTGTGAAGCTTT+TGG + chr4.1:41505969-41505988 MS.gene09394:CDS 30.0%
! CATTCCCAATTTTACTGTTT+TGG - chr4.1:41506311-41506330 None:intergenic 30.0%
! CCTGAATTTAGCTTAATAAG+TGG + chr4.1:41508110-41508129 MS.gene09394:intron 30.0%
! CTCAACTTTTACAAATTTCC+AGG - chr4.1:41505406-41505425 None:intergenic 30.0%
! CTGCATTTCATTCTGAAAAT+TGG + chr4.1:41508389-41508408 MS.gene09394:intron 30.0%
! GGTAATGTGCTCTATATTTT+TGG - chr4.1:41505273-41505292 None:intergenic 30.0%
! GTGCTATTATCATTTGATGT+TGG + chr4.1:41506889-41506908 MS.gene09394:intron 30.0%
! TGTATGGTTTTTGAATTCCT+TGG + chr4.1:41506030-41506049 MS.gene09394:CDS 30.0%
! TTACCCTTACCTGATATTTT+TGG + chr4.1:41505795-41505814 MS.gene09394:intron 30.0%
!! ATTGACCGATGTTTGATTTT+AGG + chr4.1:41505636-41505655 MS.gene09394:intron 30.0%
!! CAAAATCAAGTATTGGAAGA+AGG - chr4.1:41508601-41508620 None:intergenic 30.0%
!! TTGACCGATGTTTGATTTTA+GGG + chr4.1:41505637-41505656 MS.gene09394:intron 30.0%
!! TTTTTGTTTGTAGCGTTATG+TGG + chr4.1:41505849-41505868 MS.gene09394:intron 30.0%
!!! ACAACACATTTTTTGTCATC+AGG - chr4.1:41505961-41505980 None:intergenic 30.0%
!!! AGCAGCATACAACTTTTTTA+TGG + chr4.1:41507198-41507217 MS.gene09394:intron 30.0%
!!! AGTTTTTTAGTACGAAACAG+GGG - chr4.1:41506850-41506869 None:intergenic 30.0%
!!! ATTTGTTTTACAGGATCATC+TGG + chr4.1:41508150-41508169 MS.gene09394:intron 30.0%
!!! CAACACATTTTTTGTCATCA+GGG - chr4.1:41505960-41505979 None:intergenic 30.0%
!!! CGAGATTTTTTCAATAGACA+TGG + chr4.1:41508473-41508492 MS.gene09394:CDS 30.0%
!!! CTAAAGGAATATTTTGATGC+AGG - chr4.1:41505501-41505520 None:intergenic 30.0%
!!! GGTTCAAACTTTTGAGTTAT+AGG + chr4.1:41504941-41504960 MS.gene09394:intron 30.0%
!!! GTAGTTTTTTAGTACGAAAC+AGG - chr4.1:41506852-41506871 None:intergenic 30.0%
!!! TTGATTTTGGTAATGCTTGT+TGG + chr4.1:41506637-41506656 MS.gene09394:CDS 30.0%
AAAGTTTGAACCTCTAGATC+AGG - chr4.1:41504933-41504952 None:intergenic 35.0%
AAATGAAGGAAAAGGGTAAG+AGG + chr4.1:41506358-41506377 MS.gene09394:CDS 35.0%
AAGTTTGAACCTCTAGATCA+GGG - chr4.1:41504932-41504951 None:intergenic 35.0%
AATGAAGGAAAAGGGTAAGA+GGG + chr4.1:41506359-41506378 MS.gene09394:CDS 35.0%
ACCCACATTTGTATCTAACA+TGG + chr4.1:41505134-41505153 MS.gene09394:intron 35.0%
ACGAAACAAGGTTTGAATCT+CGG + chr4.1:41505100-41505119 MS.gene09394:intron 35.0%
ATAGTGGTGACAACTATGAT+AGG + chr4.1:41506811-41506830 MS.gene09394:CDS 35.0%
ATCTTCATCAAACACGAGTT+AGG - chr4.1:41505759-41505778 None:intergenic 35.0%
ATGTGTTCATCGTTGATATC+GGG + chr4.1:41504806-41504825 MS.gene09394:intron 35.0%
ATTGTTACAATTATCCCGCT+CGG - chr4.1:41506445-41506464 None:intergenic 35.0%
CCCACATTTGTATCTAACAT+GGG + chr4.1:41505135-41505154 MS.gene09394:intron 35.0%
CCCATGTTAGATACAAATGT+GGG - chr4.1:41505138-41505157 None:intergenic 35.0%
GAATGAAGTAACACATTCTC+AGG - chr4.1:41506195-41506214 None:intergenic 35.0%
GATACTATTATGGGGTTCTA+AGG + chr4.1:41507548-41507567 MS.gene09394:intron 35.0%
GATGTGTTCATCGTTGATAT+CGG + chr4.1:41504805-41504824 MS.gene09394:intron 35.0%
GATTACAGTTCAGAAGATGA+AGG + chr4.1:41504567-41504586 MS.gene09394:CDS 35.0%
GGAGAAGAAAATGAAGGAAA+AGG + chr4.1:41506350-41506369 MS.gene09394:CDS 35.0%
TAGTGGTGACAACTATGATA+GGG + chr4.1:41506812-41506831 MS.gene09394:CDS 35.0%
TATATGCAAAACTGTACCAG+GGG - chr4.1:41507339-41507358 None:intergenic 35.0%
TCAGGGTCAAAATCAAGTAT+TGG - chr4.1:41508608-41508627 None:intergenic 35.0%
TCCCATGTTAGATACAAATG+TGG - chr4.1:41505139-41505158 None:intergenic 35.0%
TCTAGTCCTTCAAATTGTCA+GGG - chr4.1:41505706-41505725 None:intergenic 35.0%
TGAAAAAATCTCGGGAATAG+CGG - chr4.1:41508466-41508485 None:intergenic 35.0%
TGAACAAGATGCAAATGACA+TGG + chr4.1:41508568-41508587 MS.gene09394:CDS 35.0%
TGGATCACTTTAAGCATTCA+GGG + chr4.1:41505989-41506008 MS.gene09394:CDS 35.0%
TGTTCAATCTAAGCTTGGTT+GGG + chr4.1:41504662-41504681 MS.gene09394:CDS 35.0%
TTCTAGTCCTTCAAATTGTC+AGG - chr4.1:41505707-41505726 None:intergenic 35.0%
TTGGATCACTTTAAGCATTC+AGG + chr4.1:41505988-41506007 MS.gene09394:CDS 35.0%
TTGTTCAATCTAAGCTTGGT+TGG + chr4.1:41504661-41504680 MS.gene09394:CDS 35.0%
TTTCCTTTGTGCTTCACATT+TGG + chr4.1:41507715-41507734 MS.gene09394:intron 35.0%
! AGGTTGAACCTTTGGATTTT+CGG - chr4.1:41507231-41507250 None:intergenic 35.0%
! ATTTTATGCCAAGAGAAAGC+TGG + chr4.1:41507428-41507447 MS.gene09394:intron 35.0%
! CGCGCTCTTTTGAATTTTAA+GGG - chr4.1:41505875-41505894 None:intergenic 35.0%
! GTTCTTTTTGATCCTCATAG+TGG + chr4.1:41506795-41506814 MS.gene09394:CDS 35.0%
! TTTCCTTCATTTTCTTCTCC+TGG - chr4.1:41506350-41506369 None:intergenic 35.0%
! TTTTATGCCAAGAGAAAGCT+GGG + chr4.1:41507429-41507448 MS.gene09394:intron 35.0%
! TTTTCGGTTGAAGAAACCTA+CGG + chr4.1:41505162-41505181 MS.gene09394:intron 35.0%
!! ATGAAGGTACTGAACACTAT+AGG + chr4.1:41504583-41504602 MS.gene09394:CDS 35.0%
!! TTGATTTTGACCCTGAAAAG+AGG + chr4.1:41508612-41508631 MS.gene09394:CDS 35.0%
!!! AGCAGCATACACTTTTTTCA+CGG - chr4.1:41507093-41507112 None:intergenic 35.0%
!!! TTTTCATGTTATAGTGGGCT+TGG + chr4.1:41506125-41506144 MS.gene09394:CDS 35.0%
AAAAGTTGTATGCTGCTGGT+TGG - chr4.1:41507195-41507214 None:intergenic 40.0%
AAGCTAAATTCAGGAAGCCA+AGG - chr4.1:41508104-41508123 None:intergenic 40.0%
ACCTTTACTCGAAGAGCTAT+TGG - chr4.1:41506502-41506521 None:intergenic 40.0%
ATATGCAAAACTGTACCAGG+GGG - chr4.1:41507338-41507357 None:intergenic 40.0%
ATCATATGGGCTTCAAGTCT+CGG - chr4.1:41507924-41507943 None:intergenic 40.0%
ATCTCTTTAACCATCGAGAG+AGG - chr4.1:41506102-41506121 None:intergenic 40.0%
CATGACCTGTTTGTTTCAAC+AGG + chr4.1:41507764-41507783 MS.gene09394:intron 40.0%
CCTTTACTCGAAGAGCTATT+GGG - chr4.1:41506501-41506520 None:intergenic 40.0%
GAACCAGGAGAAGAAAATGA+AGG + chr4.1:41506344-41506363 MS.gene09394:CDS 40.0%
GATAAGTTTCCTACCTTGCT+AGG - chr4.1:41508205-41508224 None:intergenic 40.0%
GATTTCCTTGGATCCTTTGA+CGG - chr4.1:41506228-41506247 None:intergenic 40.0%
GCAACTGCATATGGATATGT+AGG - chr4.1:41505294-41505313 None:intergenic 40.0%
GTTCAATCTAAGCTTGGTTG+GGG + chr4.1:41504663-41504682 MS.gene09394:CDS 40.0%
GTTCCAAATGTGAAGCACAA+AGG - chr4.1:41507721-41507740 None:intergenic 40.0%
TAATTAAGTTAAAGGCCCCC+TGG + chr4.1:41507320-41507339 MS.gene09394:intron 40.0%
TATTTCCTGCAGATTGCACT+TGG + chr4.1:41508437-41508456 MS.gene09394:intron 40.0%
TCAAAGGATCCAAGGAAATC+AGG + chr4.1:41506228-41506247 MS.gene09394:CDS 40.0%
TCAATAGACATGGTGACTTG+AGG + chr4.1:41508483-41508502 MS.gene09394:CDS 40.0%
TCATAGTTGTCACCACTATG+AGG - chr4.1:41506810-41506829 None:intergenic 40.0%
TGAAAAGAGAAGGAAGGACA+AGG + chr4.1:41508742-41508761 MS.gene09394:CDS 40.0%
TGACAACAAGGTTGAACCTT+TGG - chr4.1:41507239-41507258 None:intergenic 40.0%
TGACAACTATGATAGGGATG+AGG + chr4.1:41506818-41506837 MS.gene09394:CDS 40.0%
TGCTTGGGATACTCTCAAAT+CGG + chr4.1:41504707-41504726 MS.gene09394:CDS 40.0%
TGTGTATGACAGATAGCTCA+CGG - chr4.1:41506161-41506180 None:intergenic 40.0%
TGTTGATCTTAAGTGCAAGC+TGG + chr4.1:41506614-41506633 MS.gene09394:CDS 40.0%
TTAGAACCAAGAAGAACCTC+AGG - chr4.1:41506711-41506730 None:intergenic 40.0%
TTCGTGTTTGGAAGGATAAG+TGG - chr4.1:41506258-41506277 None:intergenic 40.0%
TTGTTACAATTATCCCGCTC+GGG - chr4.1:41506444-41506463 None:intergenic 40.0%
TTTAAGCATTCAGGGCCTAA+TGG + chr4.1:41505997-41506016 MS.gene09394:CDS 40.0%
! GAATGCTCATTGATTGCATC+AGG - chr4.1:41508719-41508738 None:intergenic 40.0%
! GCGCGCTCTTTTGAATTTTA+AGG - chr4.1:41505876-41505895 None:intergenic 40.0%
! GGAAGAATCTAGCTCATTTG+AGG - chr4.1:41505066-41505085 None:intergenic 40.0%
! GTGAAAAAAGTGTATGCTGC+TGG + chr4.1:41507092-41507111 MS.gene09394:intron 40.0%
! TGAGTGTTTTCTGAACAGAG+TGG + chr4.1:41506961-41506980 MS.gene09394:intron 40.0%
! TTCACTGATTGATCCGTCAA+AGG + chr4.1:41506212-41506231 MS.gene09394:CDS 40.0%
! TTCTTATGACTGTCGTTTCC+TGG - chr4.1:41506558-41506577 None:intergenic 40.0%
! TTGTGCTTCACATTTGGAAC+TGG + chr4.1:41507721-41507740 MS.gene09394:intron 40.0%
!! AAGTGCAAGCTGGTTGATTT+TGG + chr4.1:41506624-41506643 MS.gene09394:CDS 40.0%
!! ATGTTGATGACTTTACGGGT+CGG - chr4.1:41508847-41508866 None:intergenic 40.0%
!! CTTGGTGATGCTTTCAACAA+TGG + chr4.1:41504630-41504649 MS.gene09394:CDS 40.0%
!! GCATTGATGATGGAACTTCT+TGG + chr4.1:41508172-41508191 MS.gene09394:CDS 40.0%
!!! AAGAGTCTGTATTTTGGTCC+TGG + chr4.1:41505385-41505404 MS.gene09394:intron 40.0%
!!! CTTTTGAGTTATAGGGCTAG+TGG + chr4.1:41504949-41504968 MS.gene09394:intron 40.0%
AACAAGGTTTGAATCTCGGC+TGG + chr4.1:41505104-41505123 MS.gene09394:intron 45.0%
AAGGCAATATAGGTGTCCTG+AGG + chr4.1:41506692-41506711 MS.gene09394:CDS 45.0%
ACAAGGTTTGAATCTCGGCT+GGG + chr4.1:41505105-41505124 MS.gene09394:intron 45.0%
ACACTACACTGAAGCTGCAA+TGG + chr4.1:41505897-41505916 MS.gene09394:CDS 45.0%
ACCTGCACTTATCCATGGAT+GGG - chr4.1:41508660-41508679 None:intergenic 45.0%
ACTCAACTCCAGCAGATATG+TGG + chr4.1:41506733-41506752 MS.gene09394:CDS 45.0%
ACTGCCTCATTCTTCGTGTT+TGG - chr4.1:41506270-41506289 None:intergenic 45.0%
AGGAAACTTATCTGCTCTGG+TGG + chr4.1:41508213-41508232 MS.gene09394:intron 45.0%
AGGATTGTAAAGAACCCGAG+CGG + chr4.1:41506427-41506446 MS.gene09394:CDS 45.0%
AGGTTGTGTACTAGTCAGTG+AGG - chr4.1:41508699-41508718 None:intergenic 45.0%
ATACACACATGCACGCCATT+AGG - chr4.1:41506015-41506034 None:intergenic 45.0%
ATTGAAAAGGACCTTGCACC+AGG + chr4.1:41506537-41506556 MS.gene09394:CDS 45.0%
CACTTATCCATGGATGGGTA+AGG - chr4.1:41508655-41508674 None:intergenic 45.0%
CATCACCAAGTTTCACAGCA+TGG - chr4.1:41504620-41504639 None:intergenic 45.0%
CCCAATAGCTCTTCGAGTAA+AGG + chr4.1:41506498-41506517 MS.gene09394:CDS 45.0%
CCTCATTCTTCGTGTTTGGA+AGG - chr4.1:41506266-41506285 None:intergenic 45.0%
CCTTCCAAACACGAAGAATG+AGG + chr4.1:41506263-41506282 MS.gene09394:CDS 45.0%
CTCAAAGCAGATGCAAGCAA+AGG - chr4.1:41506760-41506779 None:intergenic 45.0%
GAGAAGGAAGGACAAGGAAA+AGG + chr4.1:41508748-41508767 MS.gene09394:CDS 45.0%
GCAGCTTCTTTCTCATGGAA+CGG - chr4.1:41506587-41506606 None:intergenic 45.0%
GGGTGAGAAGATTATCACCA+AGG - chr4.1:41506050-41506069 None:intergenic 45.0%
GGTAGGAAACTTATCTGCTC+TGG + chr4.1:41508210-41508229 MS.gene09394:intron 45.0%
GGTTGTGTACTAGTCAGTGA+GGG - chr4.1:41508698-41508717 None:intergenic 45.0%
GTCAAAGCTTCCCATTCTTG+TGG + chr4.1:41508051-41508070 MS.gene09394:intron 45.0%
GTCCTTCAAATTGTCAGGGT+CGG - chr4.1:41505702-41505721 None:intergenic 45.0%
TAATGGCGTGCATGTGTGTA+TGG + chr4.1:41506014-41506033 MS.gene09394:CDS 45.0%
TATCTCACCCAGCTTTCTCT+TGG - chr4.1:41507439-41507458 None:intergenic 45.0%
TATTCAGGACCCTGATCTAG+AGG + chr4.1:41504920-41504939 MS.gene09394:intron 45.0%
TCTTGGAAAGATGCCTAGCA+AGG + chr4.1:41508189-41508208 MS.gene09394:CDS 45.0%
TGCTGGTAGTCGATCAAAGT+TGG + chr4.1:41507109-41507128 MS.gene09394:intron 45.0%
TGGGATACTCTCAAATCGGT+GGG + chr4.1:41504711-41504730 MS.gene09394:intron 45.0%
TTCCATGAGAAAGAAGCTGC+TGG + chr4.1:41506587-41506606 MS.gene09394:CDS 45.0%
TTGATCCGTCAAAGGATCCA+AGG + chr4.1:41506220-41506239 MS.gene09394:CDS 45.0%
TTGGGATACTCTCAAATCGG+TGG + chr4.1:41504710-41504729 MS.gene09394:intron 45.0%
! AACCTTGTTTCGTCACGTTG+TGG - chr4.1:41505093-41505112 None:intergenic 45.0%
! ACCTTGTTTCGTCACGTTGT+GGG - chr4.1:41505092-41505111 None:intergenic 45.0%
! TGTTTGACTCGATTGAGCAG+CGG - chr4.1:41507171-41507190 None:intergenic 45.0%
! TTCTTCTCCTGGTTCTTCGT+CGG - chr4.1:41506339-41506358 None:intergenic 45.0%
!! ATCTGCTTTGAGCTTGCTAC+TGG + chr4.1:41506768-41506787 MS.gene09394:CDS 45.0%
!! GGATCATCTGGCATTGATGA+TGG + chr4.1:41508162-41508181 MS.gene09394:intron 45.0%
!! GTTTTGGGCCGAAAATCCAA+AGG + chr4.1:41507220-41507239 MS.gene09394:intron 45.0%
!! TGTTGATGACTTTACGGGTC+GGG - chr4.1:41508846-41508865 None:intergenic 45.0%
!! TTCCACTGTTTGGCTTGCTT+GGG + chr4.1:41504692-41504711 MS.gene09394:CDS 45.0%
!! TTTCCACTGTTTGGCTTGCT+TGG + chr4.1:41504691-41504710 MS.gene09394:CDS 45.0%
!!! CGGGAGTTTTTGAGTGACAT+AGG - chr4.1:41508827-41508846 None:intergenic 45.0%
!!! GGGGTCATTTTTCCACTGTT+TGG + chr4.1:41504682-41504701 MS.gene09394:CDS 45.0%
AAAGTTGGCTGCTGCTGGTA+TGG + chr4.1:41507124-41507143 MS.gene09394:intron 50.0%
AACTTCCACCAACTCCTGCT+CGG - chr4.1:41508774-41508793 None:intergenic 50.0%
ACATCCGTGAGTTGCGATTC+TGG + chr4.1:41508507-41508526 MS.gene09394:CDS 50.0%
ACCCATCCATGGATAAGTGC+AGG + chr4.1:41508656-41508675 MS.gene09394:CDS 50.0%
ACGGAAAGTCCAGAGGAATC+TGG + chr4.1:41506402-41506421 MS.gene09394:CDS 50.0%
ACTGAACACTATAGGCGTGG+TGG + chr4.1:41504591-41504610 MS.gene09394:CDS 50.0%
AGGTGTCCTGAGGTTCTTCT+TGG + chr4.1:41506702-41506721 MS.gene09394:CDS 50.0%
ATCCCAAGCAAGCCAAACAG+TGG - chr4.1:41504697-41504716 None:intergenic 50.0%
CGGAAAGTCCAGAGGAATCT+GGG + chr4.1:41506403-41506422 MS.gene09394:CDS 50.0%
CTGAACACTATAGGCGTGGT+GGG + chr4.1:41504592-41504611 MS.gene09394:CDS 50.0%
GAAGGAAAAGGGTAAGAGGG+TGG + chr4.1:41506362-41506381 MS.gene09394:CDS 50.0%
GACCGACCCTGACAATTTGA+AGG + chr4.1:41505697-41505716 MS.gene09394:intron 50.0%
GACCTGCACTTATCCATGGA+TGG - chr4.1:41508661-41508680 None:intergenic 50.0%
GCAAAGGACCACATATCTGC+TGG - chr4.1:41506744-41506763 None:intergenic 50.0%
GGAAAGATGCCTAGCAAGGT+AGG + chr4.1:41508193-41508212 MS.gene09394:intron 50.0%
GGAAAGTCCAGAGGAATCTG+GGG + chr4.1:41506404-41506423 MS.gene09394:CDS 50.0%
GGATTGTAAAGAACCCGAGC+GGG + chr4.1:41506428-41506447 MS.gene09394:CDS 50.0%
GGCTCAAGGTTGTGTTGAGA+CGG + chr4.1:41506383-41506402 MS.gene09394:CDS 50.0%
GGGTACCATGCTGTGAAACT+TGG + chr4.1:41504612-41504631 MS.gene09394:CDS 50.0%
TGCCAGCAGCTTCTTTCTCA+TGG - chr4.1:41506592-41506611 None:intergenic 50.0%
TGTTGAGACGGAAAGTCCAG+AGG + chr4.1:41506395-41506414 MS.gene09394:CDS 50.0%
TTCCTGCAGATTGCACTTGG+TGG + chr4.1:41508440-41508459 MS.gene09394:intron 50.0%
! AGTGGAGCACCTGATTTCCT+TGG - chr4.1:41506240-41506259 None:intergenic 50.0%
! GGTACTGAACACTATAGGCG+TGG + chr4.1:41504588-41504607 MS.gene09394:CDS 50.0%
!! AGTTGGTGGAAGTTGGTGTG+AGG + chr4.1:41508780-41508799 MS.gene09394:CDS 50.0%
!! CAGCTGTTGGCCTCTTTTCA+GGG - chr4.1:41508625-41508644 None:intergenic 50.0%
AAGGGTAAGAGGGTGGCTCA+AGG + chr4.1:41506369-41506388 MS.gene09394:CDS 55.0%
AAGTCCAGAGGAATCTGGGG+AGG + chr4.1:41506407-41506426 MS.gene09394:CDS 55.0%
AGTGAGGGCTCAAGAGTTCG+AGG - chr4.1:41508683-41508702 None:intergenic 55.0%
CAATCCTCCCCAGATTCCTC+TGG - chr4.1:41506414-41506433 None:intergenic 55.0%
CGAGGACCTGCACTTATCCA+TGG - chr4.1:41508665-41508684 None:intergenic 55.0%
CGATCAAAGTTGGCTGCTGC+TGG + chr4.1:41507119-41507138 MS.gene09394:intron 55.0%
CTCAGTGCCTTACCCATCCA+TGG + chr4.1:41508645-41508664 MS.gene09394:CDS 55.0%
GCCCACAACGTGACGAAACA+AGG + chr4.1:41505088-41505107 MS.gene09394:intron 55.0%
GTTTCGTCACGTTGTGGGCA+TGG - chr4.1:41505087-41505106 None:intergenic 55.0%
TCGGCCAGAATCGCAACTCA+CGG - chr4.1:41508514-41508533 None:intergenic 55.0%
TCGTGGAGTTCCTCTCTCGA+TGG + chr4.1:41506089-41506108 MS.gene09394:CDS 55.0%
TGGAGATCCGACGAAGAACC+AGG + chr4.1:41506329-41506348 MS.gene09394:CDS 55.0%
TGGGTACCAGTGGCGTATTC+AGG + chr4.1:41504905-41504924 MS.gene09394:intron 55.0%
! GACTGTCGTTTCCTGGTGCA+AGG - chr4.1:41506551-41506570 None:intergenic 55.0%
!! CAATGTGGGTTGGGTACCAG+TGG + chr4.1:41504895-41504914 MS.gene09394:intron 55.0%
!! GAGCAGGAGTTGGTGGAAGT+TGG + chr4.1:41508773-41508792 MS.gene09394:CDS 55.0%
!! GCAGCTGTTGGCCTCTTTTC+AGG - chr4.1:41508626-41508645 None:intergenic 55.0%
!! GTAAGGCACTGAGCAGCTGT+TGG - chr4.1:41508638-41508657 None:intergenic 55.0%
AAAGGCCGAGCAGGAGTTGG+TGG + chr4.1:41508766-41508785 MS.gene09394:CDS 60.0%
CAGGGTCCTGAATACGCCAC+TGG - chr4.1:41504914-41504933 None:intergenic 60.0%
GATTGAGCAGCGGCACTGCT+GGG - chr4.1:41507161-41507180 None:intergenic 60.0%
GGAAAAGGCCGAGCAGGAGT+TGG + chr4.1:41508763-41508782 MS.gene09394:CDS 60.0%
GGACAAGGAAAAGGCCGAGC+AGG + chr4.1:41508757-41508776 MS.gene09394:CDS 60.0%
GGCCACCAAGTGCAATCTGC+AGG - chr4.1:41508445-41508464 None:intergenic 60.0%
CGATTGAGCAGCGGCACTGC+TGG - chr4.1:41507162-41507181 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 41504543 41508868 41504543 ID=MS.gene09394
chr4.1 mRNA 41504543 41508868 41504543 ID=MS.gene09394.t1;Parent=MS.gene09394
chr4.1 exon 41504543 41504728 41504543 ID=MS.gene09394.t1.exon1;Parent=MS.gene09394.t1
chr4.1 CDS 41504543 41504728 41504543 ID=cds.MS.gene09394.t1;Parent=MS.gene09394.t1
chr4.1 exon 41505862 41506839 41505862 ID=MS.gene09394.t1.exon2;Parent=MS.gene09394.t1
chr4.1 CDS 41505862 41506839 41505862 ID=cds.MS.gene09394.t1;Parent=MS.gene09394.t1
chr4.1 exon 41508163 41508210 41508163 ID=MS.gene09394.t1.exon3;Parent=MS.gene09394.t1
chr4.1 CDS 41508163 41508210 41508163 ID=cds.MS.gene09394.t1;Parent=MS.gene09394.t1
chr4.1 exon 41508449 41508868 41508449 ID=MS.gene09394.t1.exon4;Parent=MS.gene09394.t1
chr4.1 CDS 41508449 41508868 41508449 ID=cds.MS.gene09394.t1;Parent=MS.gene09394.t1
Gene Sequence

>MS.gene09394

ATGGAGAGAAAAGGTATCAACAATGATTACAGTTCAGAAGATGAAGGTACTGAACACTATAGGCGTGGTGGGTACCATGCTGTGAAACTTGGTGATGCTTTCAACAATGGCTGCTATGTTGTTCAATCTAAGCTTGGTTGGGGTCATTTTTCCACTGTTTGGCTTGCTTGGGATACTCTCAAATCGGTGGGTGTTTCCTTTTTAACTAGTTCATTGTTTTCTTACCTTTTTTGTTTGTTTTTGTTTTTGGAATTTGTTGTTTGATGTGTTCATCGTTGATATCGGGTATCATTAGAGTTTTTCCATTGTAATTACGAAATTACGACTTTGATTTTGATGTAGAAATAGTAATCAATGTGGGTTGGGTACCAGTGGCGTATTCAGGACCCTGATCTAGAGGTTCAAACTTTTGAGTTATAGGGCTAGTGGTGTAAAAAGATTTTTTTAGGGGTTCAAAATGCAAAATATATAGGGTTATATTTGCATTGCTTTTTAAAGTTTAGGGGGTTCAATTGATCTACCTCAAATGAGCTAGATTCTTCCATGCCCACAACGTGACGAAACAAGGTTTGAATCTCGGCTGGGAAAGTTACCCACATTTGTATCTAACATGGGATTATTTTCGGTTGAAGAAACCTACGGAAAACAAAAAAAAAAACTAGGAAATTGTAATAACCTTGAAAATAGGAAGTAAAATGGTGAAAATGTTATGTTTTTGTTAATATTACCAAAAATATAGAGCACATTACCTACATATCCATATGCAGTTGCATATTTTTTTTGGTAATGATGCACACTTGATATCACATTAGTATCAACATTCGATACTAGTGAAATCATATAAGAGTCTGTATTTTGGTCCTGGAAATTTGTAAAAGTTGAGCAATGTAGTCCCTCAAACATATGAAATAGCAAATTAGTCCCTTTTCATTGAAGAACGTCAATCAATTTTGTCCCTGCATCAAAATATTCCTTTAGTAAATATGCATCAAAATTCAAAAGACTGACAAGTTGACTTGAATATTCTCTTGCTGAATTAAGACAAGCATACAACCTTTACAATTGTTTTGCTTATTTTCGAAAAAAAGACTAAATTGACCGATGTTTGATTTTAGGGACTAAATTGCTATTTTGCAAATTTGAGGGACGAAATTGACCGACCCTGACAATTTGAAGGACTAGAATGTTGATTCACTCAACATAGAACAAACTTCCTAACTCGTGTTTGATGAAGATCTGATAACAAATTACATTACCCTTACCTGATATTTTTGGATTTCTGAACTCTGTTAATGATTTGGAAAGTTTTTTGTTTGTAGCGTTATGTGGCCCTTAAAATTCAAAAGAGCGCGCAACACTACACTGAAGCTGCAATGGATGAAATAAAGATTCTCAAACAAATTGAAGAGGGAGACCCTGATGACAAAAAATGTGTTGTGAAGCTTTTGGATCACTTTAAGCATTCAGGGCCTAATGGCGTGCATGTGTGTATGGTTTTTGAATTCCTTGGTGATAATCTTCTCACCCTTATCAAATATAGTGACTATCGTGGAGTTCCTCTCTCGATGGTTAAAGAGATATGTTTTCATGTTATAGTGGGCTTGGATTACTTGCACCGTGAGCTATCTGTCATACACACTGATTTGAAGCCTGAGAATGTGTTACTTCATTCACTGATTGATCCGTCAAAGGATCCAAGGAAATCAGGTGCTCCACTTATCCTTCCAAACACGAAGAATGAGGCAGTGTCTAATAATGACATTATCCAAAACAGTAAAATTGGGAATGGAGATCCGACGAAGAACCAGGAGAAGAAAATGAAGGAAAAGGGTAAGAGGGTGGCTCAAGGTTGTGTTGAGACGGAAAGTCCAGAGGAATCTGGGGAGGATTGTAAAGAACCCGAGCGGGATAATTGTAACAATGTGAAATCTGGTGTAGAATCTGTTGAAAACAAACCCAATAGCTCTTCGAGTAAAGGTGAATCAACACAGACTATTGAAAAGGACCTTGCACCAGGAAACGACAGTCATAAGAAAAGTAGCCGTTCCATGAGAAAGAAGCTGCTGGCAGCTGTTGATCTTAAGTGCAAGCTGGTTGATTTTGGTAATGCTTGTTGGACATATAAACAGTTCACAAATGATATTCAAACAAGGCAATATAGGTGTCCTGAGGTTCTTCTTGGTTCTAAATACTCAACTCCAGCAGATATGTGGTCCTTTGCTTGCATCTGCTTTGAGCTTGCTACTGGTGATGTTCTTTTTGATCCTCATAGTGGTGACAACTATGATAGGGATGAGGCAAGTTCCCCTGTTTCGTACTAAAAAACTACTGTTTTGCTTTTATTTTGTGCTATTATCATTTGATGTTGGTAATTTAATTGTGATAATCTTTATTAGTCTTTGAAAACTGATTTGCTACTGAGTGTTTTCTGAACAGAGTGGAAGCTCTTTTGTCCTTAAATTTTTGGTTGGTTATTATACAACTTATTGTTCAACCTTTTCATGCTTTTACAATCATTTACTACCTTTAACGATTTTCTGTTCAAAACCGTGAAAAAAGTGTATGCTGCTGGTAGTCGATCAAAGTTGGCTGCTGCTGGTATGGTCTCTACAACTCCCAGCAGTGCCGCTGCTCAATCGAGTCAAACATCCAACCAGCAGCATACAACTTTTTTATGGTTTTGGGCCGAAAATCCAAAGGTTCAACCTTGTTGTCATTTAAAAAAATAAATGACCTTGTTCATCTAAAATAAAGATAAAGGATCTGTTTGAAACTTTTAATTAAGTTAAAGGCCCCCTGGTACAGTTTTGCATATATTTAATTATCTACCGACTTTACTAAATTACTTTCTGAAAGAAAAAGTTAAATGCTACATTTTGGAAATAATTTTATGCCAAGAGAAAGCTGGGTGAGATATAGTTCTTCTATCTTGATAGAGCTGTAAATTATAATGCCGAAAGCTTTGCTTAAGCTATAGAATTGTAATTTATAGTTTGACAATGTGAGATACTATTATGGGGTTCTAAGGCTTAGTAAAATAATACAAAGGATTTGTCTAGGATAGTTCAAAAACATTTTCCCCCTAAACATACTATTTTCTCTTTGATGTCTAGACCAATAATATTATCATGCTTGTCTCTTGATTCTCATTTATATATGCACTCTTTATAATTTTCCTTTGTGCTTCACATTTGGAACTGGAAAATATAATGTGGCTAAAACATGACCTGTTTGTTTCAACAGGAATTTGCAATCTTCAATTTTGAATATGTTTTGCTGTTACCCTATTGTTGATCTTAGAATTGAGGCTTCACTATGATTCTTTGTTGCTAATTAATGAAAATTTTGAATAAATAATTGGTAAAATAGTTAAAATCACCGAGACTTGAAGCCCATATGATATAAAGTTTATATTTTGTCCTCTTACGATTTACATAAATTGTCGACATTGATTTTAATGATAAACCTAGAAGATTTGACTCAACATAAATTAAAGAGATAGATATGGGTCAAAGCTTCCCATTCTTGTGGAATATGCTTTAAAATTTGAAAAGAATGCCTTGGCTTCCTGAATTTAGCTTAATAAGTGGATTTTTAAATGATATTTATTTGTTTTACAGGATCATCTGGCATTGATGATGGAACTTCTTGGAAAGATGCCTAGCAAGGTAGGAAACTTATCTGCTCTGGTGGAAATTATGAAGTTACATGTCATCGATTTTACATGTTTTCATGTTCAATAAACACTATTCATTTTTATTTTATTTTATGATAATTGTGTACTCAATTTGTCTCTTAATGAGTTTTTTTTTTGCGTAAAAAAACAAAACAATAGGGTATAAAATACTGCATTTCATTCTGAAAATTGGATGTCAACTGCAAAATTTAATCAAATATTTCCTGCAGATTGCACTTGGTGGCCGCTATTCCCGAGATTTTTTCAATAGACATGGTGACTTGAGGCACATCCGTGAGTTGCGATTCTGGCCGAAAAAAAAGATTCTGATGGAGAAGTATAGTTTCAGTGAACAAGATGCAAATGACATGGCTGACTTCCTTCTTCCAATACTTGATTTTGACCCTGAAAAGAGGCCAACAGCTGCTCAGTGCCTTACCCATCCATGGATAAGTGCAGGTCCTCGAACTCTTGAGCCCTCACTGACTAGTACACAACCTGATGCAATCAATGAGCATTCATTTGAAAAGAGAAGGAAGGACAAGGAAAAGGCCGAGCAGGAGTTGGTGGAAGTTGGTGTGAGGAATATATCTATTAATGGATCTCCTATGTCACTCAAAAACTCCCGACCCGTAAAGTCATCAACATAG
Protein sequence

>MS.gene09394.t1

MERKGINNDYSSEDEGTEHYRRGGYHAVKLGDAFNNGCYVVQSKLGWGHFSTVWLAWDTLKSRYVALKIQKSAQHYTEAAMDEIKILKQIEEGDPDDKKCVVKLLDHFKHSGPNGVHVCMVFEFLGDNLLTLIKYSDYRGVPLSMVKEICFHVIVGLDYLHRELSVIHTDLKPENVLLHSLIDPSKDPRKSGAPLILPNTKNEAVSNNDIIQNSKIGNGDPTKNQEKKMKEKGKRVAQGCVETESPEESGEDCKEPERDNCNNVKSGVESVENKPNSSSSKGESTQTIEKDLAPGNDSHKKSSRSMRKKLLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADMWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGKMPSKIALGGRYSRDFFNRHGDLRHIRELRFWPKKKILMEKYSFSEQDANDMADFLLPILDFDPEKRPTAAQCLTHPWISAGPRTLEPSLTSTQPDAINEHSFEKRRKDKEKAEQELVEVGVRNISINGSPMSLKNSRPVKSST