AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene007767

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene007767.t1 MTR_4g056390 97.790 543 12 0 1 543 1 543 0.0 1110
MS.gene007767.t1 MTR_2g084555 76.909 537 115 4 8 542 9 538 0.0 818
MS.gene007767.t1 MTR_1g061690 67.547 530 166 3 7 536 12 535 0.0 756
MS.gene007767.t1 MTR_5g024270 51.188 463 161 5 18 479 17 415 5.02e-166 478
MS.gene007767.t1 MTR_8g073250 48.031 508 175 7 20 526 19 438 7.29e-164 473
MS.gene007767.t1 MTR_5g024270 50.000 390 130 5 18 406 17 342 1.61e-129 383
MS.gene007767.t1 MTR_3g076540 36.943 157 92 4 24 180 80 229 5.86e-24 104
MS.gene007767.t1 MTR_3g076540 30.769 169 100 3 319 478 259 419 6.02e-18 86.7
MS.gene007767.t1 MTR_3g076540 36.943 157 92 4 24 180 80 229 7.09e-24 104
MS.gene007767.t1 MTR_3g076540 29.379 177 100 4 319 478 259 427 1.84e-15 79.0
MS.gene007767.t1 MTR_3g109390 35.227 176 105 5 5 180 43 209 4.27e-23 100
MS.gene007767.t1 MTR_3g109390 40.196 102 53 2 319 420 238 331 1.15e-17 84.7
MS.gene007767.t1 MTR_4g104620 36.306 157 93 4 24 180 84 233 4.27e-23 102
MS.gene007767.t1 MTR_4g104620 29.586 169 102 3 319 478 263 423 3.75e-16 81.3
MS.gene007767.t1 MTR_3g109390 35.227 176 105 5 5 180 43 209 4.47e-23 102
MS.gene007767.t1 MTR_3g109390 32.184 174 89 4 319 478 238 396 7.75e-22 98.2
MS.gene007767.t1 MTR_3g109390 35.227 176 105 5 5 180 43 209 4.70e-23 102
MS.gene007767.t1 MTR_3g109390 31.609 174 92 3 319 478 238 398 2.12e-22 99.8
MS.gene007767.t1 MTR_3g109390 35.227 176 105 5 5 180 21 187 8.22e-23 100
MS.gene007767.t1 MTR_3g109390 31.609 174 92 3 319 478 216 376 1.60e-22 100
MS.gene007767.t1 MTR_3g076540 37.500 152 88 4 29 180 3 147 8.33e-23 100
MS.gene007767.t1 MTR_3g076540 30.769 169 100 3 319 478 177 337 2.49e-18 87.0
MS.gene007767.t1 MTR_3g109390 31.609 174 92 3 319 478 225 385 2.04e-22 99.8
MS.gene007767.t1 MTR_3g109390 34.868 152 93 3 29 180 51 196 2.64e-20 93.6
MS.gene007767.t1 MTR_3g109390 31.609 174 92 3 319 478 247 407 3.87e-22 99.4
MS.gene007767.t1 MTR_3g109390 34.868 152 93 3 29 180 73 218 3.28e-20 93.6
MS.gene007767.t1 MTR_4g104620 38.571 140 80 3 41 180 6 139 3.94e-22 98.2
MS.gene007767.t1 MTR_4g104620 29.586 169 102 3 319 478 169 329 1.49e-16 81.3
MS.gene007767.t1 MTR_8g070930 37.589 141 82 3 39 178 139 274 1.63e-21 99.4
MS.gene007767.t1 MTR_8g070930 29.717 212 98 4 317 484 283 487 2.77e-17 85.9
MS.gene007767.t1 MTR_3g086530 31.765 170 106 5 14 180 66 228 2.53e-21 95.1
MS.gene007767.t1 MTR_3g086530 31.765 170 106 5 14 180 66 228 5.03e-21 95.5
MS.gene007767.t1 MTR_3g086530 31.405 121 70 2 319 439 260 367 2.66e-14 75.1
MS.gene007767.t1 MTR_3g076540 37.500 136 79 3 45 180 1 130 8.98e-21 94.0
MS.gene007767.t1 MTR_3g076540 30.769 169 100 3 319 478 160 320 2.61e-18 86.7
MS.gene007767.t1 MTR_3g086530 31.765 170 106 5 14 180 66 228 9.65e-21 95.1
MS.gene007767.t1 MTR_3g086530 26.554 177 101 4 319 480 260 422 2.05e-15 79.0
MS.gene007767.t1 MTR_4g104620 38.235 136 78 3 45 180 1 130 1.16e-20 93.6
MS.gene007767.t1 MTR_4g104620 29.586 169 102 3 319 478 160 320 1.79e-16 81.3
MS.gene007767.t1 MTR_0349s0030 30.964 197 111 4 288 479 109 285 3.73e-20 91.3
MS.gene007767.t1 MTR_6g074905 32.143 168 100 4 317 479 1007 1165 4.38e-20 95.1
MS.gene007767.t1 MTR_5g082700 31.638 177 103 6 317 485 546 712 9.19e-20 93.6
MS.gene007767.t1 MTR_5g082700 37.162 148 84 3 37 180 401 543 6.48e-16 81.3
MS.gene007767.t1 MTR_1g111180 36.264 182 94 7 319 485 823 997 9.51e-18 87.4
MS.gene007767.t1 MTR_1g111180 32.065 184 103 7 1 178 648 815 5.00e-17 85.1
MS.gene007767.t1 MTR_1g111180 36.264 182 94 7 319 485 822 996 1.01e-17 87.4
MS.gene007767.t1 MTR_1g111180 32.065 184 103 7 1 178 647 814 5.27e-17 85.1
MS.gene007767.t1 MTR_3g086530 26.404 178 102 4 318 480 87 250 3.73e-16 79.0
MS.gene007767.t1 MTR_5g082700 37.162 148 84 3 37 180 401 543 3.91e-16 82.0
MS.gene007767.t1 MTR_5g082700 37.162 148 84 3 37 180 401 543 6.95e-16 81.3
MS.gene007767.t1 MTR_5g082700 33.621 116 69 3 317 430 546 655 8.00e-13 71.6
MS.gene007767.t1 MTR_3g086530 35.345 116 69 3 65 180 2 111 7.01e-16 79.0
MS.gene007767.t1 MTR_3g086530 26.554 177 101 4 319 480 143 305 7.98e-16 79.0
MS.gene007767.t1 MTR_4g087620 32.836 201 99 10 284 480 174 342 7.68e-15 77.0
MS.gene007767.t1 MTR_8g098845 31.527 203 100 9 284 480 171 340 2.30e-13 72.4
MS.gene007767.t1 MTR_8g028720 31.000 200 103 8 284 479 156 324 7.95e-13 70.5
MS.gene007767.t1 MTR_4g061320 31.000 200 105 9 284 480 159 328 1.38e-12 69.7
MS.gene007767.t1 MTR_3g089510 32.301 226 120 9 308 524 155 356 1.57e-12 70.5
MS.gene007767.t1 MTR_3g089510 32.301 226 120 9 308 524 143 344 1.57e-12 70.5
MS.gene007767.t1 MTR_4g117490 33.333 219 116 10 308 517 155 352 1.67e-12 70.5
MS.gene007767.t1 MTR_2g021330 33.182 220 115 11 308 517 155 352 1.88e-12 70.1
MS.gene007767.t1 MTR_8g080190 30.583 206 125 6 317 518 522 713 2.70e-12 70.1
MS.gene007767.t1 MTR_2g021330 32.727 220 116 12 308 517 155 352 3.01e-12 68.9
MS.gene007767.t1 MTR_8g106960 30.594 219 122 10 308 517 248 445 7.14e-12 68.6
MS.gene007767.t1 MTR_8g106960 30.594 219 122 10 308 517 248 445 7.38e-12 68.6
MS.gene007767.t1 MTR_4g117490 32.870 216 116 9 308 514 155 350 7.90e-12 68.2
MS.gene007767.t1 MTR_6g074870 30.201 149 83 3 288 436 220 347 9.01e-12 67.0
MS.gene007767.t1 MTR_5g010030 30.000 200 107 8 284 480 160 329 1.31e-11 66.6
MS.gene007767.t1 MTR_7g078690 29.146 199 108 8 284 479 157 325 4.14e-11 65.1
MS.gene007767.t1 MTR_6g074750 42.857 56 32 0 319 374 58 113 4.64e-11 60.5
MS.gene007767.t1 MTR_2g072840 31.925 213 114 9 308 510 155 346 6.31e-11 65.5
MS.gene007767.t1 MTR_2g072840 30.660 212 118 8 308 510 65 256 7.13e-11 65.1
MS.gene007767.t1 MTR_2g072840 31.925 213 114 9 308 510 155 346 7.36e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene007767.t1 AT3G53030 66.729 535 145 8 1 527 1 510 0.0 714
MS.gene007767.t1 AT3G44850 68.381 525 156 4 8 529 14 531 0.0 709
MS.gene007767.t1 AT5G22840 64.516 527 162 4 8 529 14 520 0.0 701
MS.gene007767.t1 AT4G35500 50.833 480 163 6 20 498 19 426 1.19e-166 480
MS.gene007767.t1 AT4G35500 48.857 481 172 7 20 498 19 427 4.65e-157 456
MS.gene007767.t1 AT2G17530 59.487 195 77 1 20 212 19 213 4.60e-79 252
MS.gene007767.t1 AT2G17530 64.286 98 35 0 308 405 245 342 3.31e-38 144
MS.gene007767.t1 AT2G17530 59.487 195 77 1 20 212 19 213 1.03e-77 251
MS.gene007767.t1 AT2G17530 61.628 172 66 0 308 479 245 416 1.57e-75 246
MS.gene007767.t1 AT2G17530 59.487 195 77 1 20 212 19 213 1.03e-77 251
MS.gene007767.t1 AT2G17530 61.628 172 66 0 308 479 245 416 1.57e-75 246
MS.gene007767.t1 AT4G24740 37.209 172 100 5 24 195 84 247 2.24e-25 107
MS.gene007767.t1 AT4G24740 37.209 172 100 5 24 195 84 247 3.19e-25 107
MS.gene007767.t1 AT4G24740 40.230 87 46 1 319 405 263 343 1.31e-14 75.9
MS.gene007767.t1 AT4G24740 37.209 172 100 5 24 195 46 209 5.30e-25 107
MS.gene007767.t1 AT4G24740 30.168 179 90 6 319 479 225 386 1.68e-18 88.2
MS.gene007767.t1 AT4G24740 37.209 172 100 5 24 195 84 247 7.54e-25 107
MS.gene007767.t1 AT4G24740 30.168 179 90 6 319 479 263 424 2.01e-18 88.2
MS.gene007767.t1 AT4G32660 37.107 159 93 4 22 180 55 206 5.29e-24 103
MS.gene007767.t1 AT4G32660 40.594 101 53 3 319 418 235 329 7.31e-15 76.6
MS.gene007767.t1 AT4G32660 37.107 159 93 4 22 180 47 198 6.71e-24 104
MS.gene007767.t1 AT4G32660 33.721 172 96 5 319 480 227 390 1.33e-19 91.3
MS.gene007767.t1 AT4G32660 37.107 159 93 4 22 180 55 206 8.25e-24 103
MS.gene007767.t1 AT4G32660 33.721 172 96 5 319 480 235 398 1.49e-19 91.3
MS.gene007767.t1 AT5G35980 37.584 149 87 3 39 186 122 265 3.69e-23 104
MS.gene007767.t1 AT5G35980 29.762 252 118 7 317 521 265 504 1.64e-18 90.1
MS.gene007767.t1 AT5G35980 37.584 149 87 3 39 186 87 230 3.73e-23 104
MS.gene007767.t1 AT5G35980 29.762 252 118 7 317 521 230 469 1.88e-18 89.7
MS.gene007767.t1 AT5G35980 37.584 149 87 3 39 186 122 265 6.19e-23 103
MS.gene007767.t1 AT5G35980 29.762 252 118 7 317 521 265 504 1.45e-18 90.1
MS.gene007767.t1 AT4G24740 37.748 151 87 4 45 195 1 144 9.37e-23 97.8
MS.gene007767.t1 AT4G24740 40.230 87 46 1 319 405 160 240 4.88e-15 75.5
MS.gene007767.t1 AT4G24740 37.748 151 87 4 45 195 1 144 2.53e-22 98.6
MS.gene007767.t1 AT4G24740 30.168 179 90 6 319 479 160 321 8.76e-19 88.2
MS.gene007767.t1 AT4G24740 37.748 151 87 4 45 195 1 144 2.53e-22 98.6
MS.gene007767.t1 AT4G24740 30.168 179 90 6 319 479 160 321 8.76e-19 88.2
MS.gene007767.t1 AT4G24740 37.748 151 87 4 45 195 1 144 2.53e-22 98.6
MS.gene007767.t1 AT4G24740 30.168 179 90 6 319 479 160 321 8.76e-19 88.2
MS.gene007767.t1 AT1G73460 33.333 168 98 4 317 479 1003 1161 4.47e-22 101
MS.gene007767.t1 AT1G73460 35.135 148 87 4 37 180 856 998 5.47e-14 75.9
MS.gene007767.t1 AT1G73460 33.333 168 98 4 317 479 1003 1161 4.47e-22 101
MS.gene007767.t1 AT1G73460 35.135 148 87 4 37 180 856 998 5.47e-14 75.9
MS.gene007767.t1 AT1G73450 32.738 168 99 4 317 479 986 1144 4.68e-22 101
MS.gene007767.t1 AT1G73450 35.135 148 87 4 37 180 839 981 5.13e-14 75.9
MS.gene007767.t1 AT3G53570 35.669 157 94 4 24 180 101 250 1.93e-21 97.8
MS.gene007767.t1 AT3G53570 30.814 172 101 4 318 479 281 444 1.30e-19 92.0
MS.gene007767.t1 AT3G53570 35.669 157 94 4 24 180 101 250 1.93e-21 97.8
MS.gene007767.t1 AT3G53570 30.814 172 101 4 318 479 281 444 1.30e-19 92.0
MS.gene007767.t1 AT3G53570 35.669 157 94 4 24 180 101 250 1.93e-21 97.8
MS.gene007767.t1 AT3G53570 30.814 172 101 4 318 479 281 444 1.30e-19 92.0
MS.gene007767.t1 AT3G53570 35.669 157 94 4 24 180 87 236 2.04e-21 97.4
MS.gene007767.t1 AT3G53570 30.814 172 101 4 318 479 267 430 1.36e-19 92.0
MS.gene007767.t1 AT3G53570 35.669 157 94 4 24 180 87 236 2.04e-21 97.4
MS.gene007767.t1 AT3G53570 30.814 172 101 4 318 479 267 430 1.36e-19 92.0
MS.gene007767.t1 AT2G40120 32.934 167 102 4 318 481 407 566 3.15e-21 97.8
MS.gene007767.t1 AT2G40120 35.135 148 87 3 37 180 259 401 1.80e-14 76.6
MS.gene007767.t1 AT3G17750 31.548 168 101 4 317 479 972 1130 4.65e-20 95.1
MS.gene007767.t1 AT3G17750 35.135 148 87 4 37 180 825 967 1.19e-13 74.7
MS.gene007767.t1 AT4G32660 33.526 173 97 5 319 481 123 287 4.93e-20 90.9
MS.gene007767.t1 AT4G32660 37.000 100 57 3 81 180 1 94 1.06e-12 69.3
MS.gene007767.t1 AT4G24740 30.168 179 90 6 319 479 57 218 9.44e-20 88.6
MS.gene007767.t1 AT4G24740 30.168 179 90 6 319 479 57 218 9.44e-20 88.6
MS.gene007767.t1 AT3G53640 33.333 180 94 7 319 480 470 641 2.94e-17 85.5
MS.gene007767.t1 AT3G53640 30.220 182 107 6 3 179 297 463 1.00e-13 74.3
MS.gene007767.t1 AT1G13350 33.540 161 96 5 24 179 428 582 1.63e-16 83.6
MS.gene007767.t1 AT1G13350 30.899 178 101 5 319 480 589 760 4.57e-16 82.0
MS.gene007767.t1 AT1G13350 33.540 161 96 5 24 179 455 609 2.17e-16 83.2
MS.gene007767.t1 AT1G13350 30.899 178 101 5 319 480 616 787 5.33e-16 82.0
MS.gene007767.t1 AT3G25840 33.333 186 87 8 318 480 763 934 2.22e-16 83.2
MS.gene007767.t1 AT3G25840 32.716 162 96 6 24 179 603 757 1.96e-14 77.0
MS.gene007767.t1 AT3G25840 33.514 185 86 8 319 480 502 672 2.43e-16 82.8
MS.gene007767.t1 AT3G25840 32.716 162 96 6 24 179 341 495 5.46e-14 75.5
MS.gene007767.t1 AT1G13350 33.540 161 96 5 24 179 501 655 3.80e-16 82.4
MS.gene007767.t1 AT1G13350 30.899 178 101 5 319 480 662 833 6.93e-16 81.6
MS.gene007767.t1 AT3G59790 29.741 232 118 10 284 506 179 374 4.43e-14 74.7
MS.gene007767.t1 AT3G45640 32.000 200 101 9 284 479 157 325 3.95e-13 71.6
MS.gene007767.t1 AT1G01560 30.151 199 106 9 284 479 159 327 6.63e-13 70.9
MS.gene007767.t1 AT3G14720 31.132 212 117 8 308 510 155 346 1.05e-12 71.2
MS.gene007767.t1 AT4G01370 30.653 199 105 9 284 479 162 330 2.00e-12 69.3
MS.gene007767.t1 AT3G14720 31.604 212 116 8 308 510 155 346 2.02e-12 69.7
MS.gene007767.t1 AT3G14720 31.604 212 116 8 308 510 155 346 2.02e-12 69.7
MS.gene007767.t1 AT2G43790 31.343 201 102 9 284 480 182 350 3.71e-12 68.6
MS.gene007767.t1 AT2G01450 31.797 217 117 11 308 514 146 341 8.75e-12 67.8
MS.gene007767.t1 AT2G01450 31.797 217 117 11 308 514 146 341 8.75e-12 67.8
MS.gene007767.t1 AT2G01450 31.797 217 117 11 308 514 146 341 8.75e-12 67.8
MS.gene007767.t1 AT2G01450 31.797 217 117 11 308 514 146 341 8.75e-12 67.8
MS.gene007767.t1 AT2G46070 30.151 199 106 9 284 479 160 328 1.91e-11 66.2
MS.gene007767.t1 AT2G46070 32.927 164 90 8 319 479 216 362 2.09e-11 66.2
MS.gene007767.t1 AT3G18040 30.594 219 122 10 308 517 65 262 5.12e-11 65.5
MS.gene007767.t1 AT3G18040 30.909 220 120 11 308 517 262 459 5.20e-11 65.9
MS.gene007767.t1 AT3G18040 30.909 220 120 11 308 517 148 345 5.91e-11 65.5
MS.gene007767.t1 AT3G18040 30.909 220 120 11 308 517 153 350 6.23e-11 65.5
MS.gene007767.t1 AT3G18040 30.909 220 120 11 308 517 262 459 7.45e-11 65.5

Find 128 sgRNAs with CRISPR-Local

Find 329 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATCCAAAACAGTAAAAT+TGG 0.157415 4.4:+46544112 MS.gene007767:CDS
TTGGATCACTTTAAGCATTC+AGG 0.213003 4.4:+46543797 MS.gene007767:CDS
ACCTTTACTCGAAGAGCTAT+TGG 0.245290 4.4:-46544308 None:intergenic
CATCTATGTTGATGACTTTA+CGG 0.264587 4.4:-46546802 None:intergenic
TTTCCACTGTTTGGCTTGCT+TGG 0.266127 4.4:+46542487 MS.gene007767:CDS
AAGTGCAAGCTGGTTGATTT+TGG 0.274103 4.4:+46544433 MS.gene007767:CDS
TTCTTATGACTGTCGTTTCC+TGG 0.298809 4.4:-46544364 None:intergenic
AGGTGTCCTGAGGTTCTTCT+TGG 0.337399 4.4:+46544511 MS.gene007767:CDS
TTCCACTGTTTGGCTTGCTT+GGG 0.339140 4.4:+46542488 MS.gene007767:CDS
ACGGAAAGTCCAGAGGAATC+TGG 0.359071 4.4:+46544211 MS.gene007767:CDS
GTGAGGAATATATCTATTAA+TGG 0.359774 4.4:+46546750 MS.gene007767:CDS
AAAATGTGTTGTGAAGCTTT+TGG 0.362109 4.4:+46543778 MS.gene007767:CDS
TGTTCAATCTAAGCTTGGTT+GGG 0.363107 4.4:+46542458 MS.gene007767:CDS
ACTGCCTCATTCTTCGTGTT+TGG 0.363420 4.4:-46544076 None:intergenic
CCTTTACTCGAAGAGCTATT+GGG 0.368968 4.4:-46544307 None:intergenic
AGAGAAGAAAATGAAGGAAA+AGG 0.380257 4.4:+46544159 MS.gene007767:CDS
GAGAAGAAAATGAAGGAAAA+GGG 0.384591 4.4:+46544160 MS.gene007767:CDS
ATCTATGTTGATGACTTTAC+GGG 0.386093 4.4:-46546801 None:intergenic
ACATCCGTGAGTTGCGATTC+TGG 0.392267 4.4:+46546460 MS.gene007767:CDS
TTCTTCTCTTGTTTCTTCGT+CGG 0.393769 4.4:-46544145 None:intergenic
GATTTCCTTGGATCCTTTGA+CGG 0.395707 4.4:-46544034 None:intergenic
GCATTGATGATGGAACTTCT+TGG 0.403191 4.4:+46546109 MS.gene007767:CDS
TTTAAGCATTCAGGGCCTAA+TGG 0.413755 4.4:+46543806 MS.gene007767:CDS
ATATTCAAACAAGGCAATAT+AGG 0.414165 4.4:+46544491 MS.gene007767:CDS
TGGATCACTTTAAGCATTCA+GGG 0.416974 4.4:+46543798 MS.gene007767:CDS
CGGAAAGTCCAGAGGAATCT+GGG 0.423521 4.4:+46544212 MS.gene007767:CDS
ACAGTGGTGACAACTATGAT+AGG 0.429417 4.4:+46544620 MS.gene007767:CDS
GATAGTCACTATATTTGATA+AGG 0.433753 4.4:-46543877 None:intergenic
GGACAAGGAAAAGGCCGAGC+AGG 0.434320 4.4:+46546710 MS.gene007767:CDS
AAATGAAGGAAAAGGGTAAG+AGG 0.436550 4.4:+46544167 MS.gene007767:CDS
ATCTGCTTTGAGCTTGCCAC+TGG 0.441460 4.4:+46544577 MS.gene007767:CDS
CCCAATAGCTCTTCGAGTAA+AGG 0.452480 4.4:+46544307 MS.gene007767:CDS
AATTGTAACAATGTGAAATC+TGG 0.453181 4.4:+46544262 MS.gene007767:CDS
TCAAAGGATCCAAGGAAATC+AGG 0.454737 4.4:+46544037 MS.gene007767:CDS
TTGAAGTGAATGGAGAGAAA+AGG 0.457401 4.4:+46542330 None:intergenic
TTCGTGTTTGGAAGGATAAG+TGG 0.458807 4.4:-46544064 None:intergenic
CAATCCTCCCCAGATTCCTC+TGG 0.462270 4.4:-46544220 None:intergenic
GAATGCTCATTGATTGCATC+AGG 0.462979 4.4:-46546669 None:intergenic
TAATGGCGTGCATGTGTGTA+TGG 0.464665 4.4:+46543823 MS.gene007767:CDS
GTTCAATCTAAGCTTGGTTG+GGG 0.469698 4.4:+46542459 MS.gene007767:CDS
GAATGAAGTAACACATTCTC+AGG 0.471207 4.4:-46544001 None:intergenic
TGCCAGCAGCTTCTTTCTCA+TGG 0.472338 4.4:-46544398 None:intergenic
TTATCCAAAACAGTAAAATT+GGG 0.472361 4.4:+46544113 MS.gene007767:CDS
GATAACTTTCCTACCTTGCT+AGG 0.473221 4.4:-46546139 None:intergenic
TGTTGATGACTTTACGGGTC+GGG 0.473456 4.4:-46546796 None:intergenic
TCAGGGTCAAAATCAAGTAT+TGG 0.476440 4.4:-46546558 None:intergenic
TATGTTGTTCAATCTAAGCT+TGG 0.476981 4.4:+46542453 MS.gene007767:CDS
AGTGGAGCACCTGATTTCCT+TGG 0.486223 4.4:-46544046 None:intergenic
ATAGTCACTATATTTGATAA+GGG 0.487347 4.4:-46543876 None:intergenic
TTCCTGCAGATTGCACTTGG+TGG 0.488149 4.4:+46546393 MS.gene007767:intron
TTGTTACAATTATCCTGCTC+GGG 0.489109 4.4:-46544250 None:intergenic
TTGTTCAATCTAAGCTTGGT+TGG 0.493944 4.4:+46542457 MS.gene007767:CDS
GGATCATCTGGCATTGATGA+TGG 0.496553 4.4:+46546099 MS.gene007767:intron
ATGAAGGCACTGAACACTAT+AGG 0.497035 4.4:+46542379 MS.gene007767:CDS
ATCAACACAGACTATTGAAA+AGG 0.498885 4.4:+46544333 MS.gene007767:CDS
GCAAAGGACCACATATCTGC+TGG 0.503873 4.4:-46544550 None:intergenic
GAGAAGGAAGGACAAGGAAA+AGG 0.507421 4.4:+46546701 MS.gene007767:CDS
CCTCATTCTTCGTGTTTGGA+AGG 0.508375 4.4:-46544072 None:intergenic
CTCAGTGCCTTACCCATCCA+TGG 0.510371 4.4:+46546598 MS.gene007767:CDS
GACTGTCGTTTCCTGGTGCA+AGG 0.511294 4.4:-46544357 None:intergenic
AGCATTCATTTGAAAAGAGA+AGG 0.511517 4.4:+46546685 MS.gene007767:CDS
CAAAACAGTAAAATTGGGAA+TGG 0.514220 4.4:+46544118 MS.gene007767:CDS
GAAACAAGAGAAGAAAATGA+AGG 0.516948 4.4:+46544153 MS.gene007767:CDS
TATTTCCTGCAGATTGCACT+TGG 0.517054 4.4:+46546390 MS.gene007767:intron
ATTGTTACAATTATCCTGCT+CGG 0.522022 4.4:-46544251 None:intergenic
CAAAATCAAGTATTGGAAGA+AGG 0.523920 4.4:-46546551 None:intergenic
AAAGGCCGAGCAGGAGTTGG+TGG 0.524206 4.4:+46546719 MS.gene007767:CDS
GAGCAGGAGTTGGTGGAAGT+TGG 0.533978 4.4:+46546726 MS.gene007767:CDS
CACTTATCCATGGATGGGTA+AGG 0.534938 4.4:-46546605 None:intergenic
TGCTTGGGATACTCTCAAAT+CGG 0.534960 4.4:+46542503 MS.gene007767:CDS
GGAAAAGGCCGAGCAGGAGT+TGG 0.538465 4.4:+46546716 MS.gene007767:CDS
GACCTGCACTTATCCATGGA+TGG 0.540258 4.4:-46546611 None:intergenic
ACCCATCCATGGATAAGTGC+AGG 0.542820 4.4:+46546609 MS.gene007767:CDS
AATGAAGGAAAAGGGTAAGA+GGG 0.543037 4.4:+46544168 MS.gene007767:CDS
TTCACTGATTGATCCGTCAA+AGG 0.543734 4.4:+46544021 MS.gene007767:CDS
ATACACACATGCACGCCATT+AGG 0.544060 4.4:-46543821 None:intergenic
ACACTACACTGAAGCTGCAA+TGG 0.544944 4.4:+46543706 MS.gene007767:CDS
ATTGAAAAGGACCTTGCACC+AGG 0.547883 4.4:+46544346 MS.gene007767:CDS
CTTGGTGATGCTTTCAACAA+TGG 0.554279 4.4:+46542426 MS.gene007767:CDS
GGCTCAAGGTTGTGTTGAGA+CGG 0.558886 4.4:+46544192 MS.gene007767:CDS
TTCATTTGAAAAGAGAAGGA+AGG 0.562994 4.4:+46546689 MS.gene007767:CDS
GCAGCTTCTTTCTCATGGAA+CGG 0.565762 4.4:-46544393 None:intergenic
CGAGGACCTGCACTTATCCA+TGG 0.565971 4.4:-46546615 None:intergenic
TTAGAACCAAGAAGAACCTC+AGG 0.569982 4.4:-46544517 None:intergenic
GGGTACCATGCTGTGAAACT+TGG 0.570597 4.4:+46542408 MS.gene007767:CDS
TTCCATGAGAAAGAAGCTGC+TGG 0.571340 4.4:+46544396 MS.gene007767:CDS
ACCTGCACTTATCCATGGAT+GGG 0.571534 4.4:-46546610 None:intergenic
GGATTGTAAAGAACCCGAGC+AGG 0.575712 4.4:+46544237 MS.gene007767:CDS
CCTTCCAAACACGAAGAATG+AGG 0.577418 4.4:+46544072 MS.gene007767:CDS
ACTCAACTCCAGCAGATATG+TGG 0.578886 4.4:+46544542 MS.gene007767:CDS
TGTTGATCTTAAGTGCAAGC+TGG 0.579496 4.4:+46544423 MS.gene007767:CDS
AGTGAGGGCTCAAGAGTTCG+AGG 0.586270 4.4:-46546633 None:intergenic
ATTCTCAAACAAATTGAAGA+GGG 0.586563 4.4:+46543740 MS.gene007767:CDS
TCGGCCAGAATCGCAACTCA+CGG 0.588389 4.4:-46546464 None:intergenic
TCAATAGACATGGTGACTTG+AGG 0.591641 4.4:+46546436 MS.gene007767:CDS
CAGTGGTGACAACTATGATA+GGG 0.596335 4.4:+46544621 MS.gene007767:CDS
CTCAAAGCAGATGCAAGCAA+AGG 0.596681 4.4:-46544566 None:intergenic
GATTCTCAAACAAATTGAAG+AGG 0.602574 4.4:+46543739 MS.gene007767:CDS
GATTACAGTTCAGAAGATGA+AGG 0.604759 4.4:+46542363 MS.gene007767:CDS
TCGTGGAGTTCCTCTCTCGA+TGG 0.611246 4.4:+46543898 MS.gene007767:CDS
AAGGGTAAGAGGGTGGCTCA+AGG 0.611541 4.4:+46544178 MS.gene007767:CDS
TTGATCCGTCAAAGGATCCA+AGG 0.613694 4.4:+46544029 MS.gene007767:CDS
GTAAGGCACTGAGCAGCTGT+TGG 0.614457 4.4:-46546588 None:intergenic
AACTTCCACCAACTCCTGCT+CGG 0.617085 4.4:-46546724 None:intergenic
CTGAACACTATAGGCGTGGT+GGG 0.618949 4.4:+46542388 MS.gene007767:CDS
TCTTGGAAAGATGCCTAGCA+AGG 0.623101 4.4:+46546126 MS.gene007767:CDS
ATCAAATATAGTGACTATCG+TGG 0.632403 4.4:+46543881 MS.gene007767:CDS
ATGTTGATGACTTTACGGGT+CGG 0.635713 4.4:-46546797 None:intergenic
TGACAACTATGATAGGGATG+AGG 0.636106 4.4:+46544627 MS.gene007767:CDS
ATCCCAAGCAAGCCAAACAG+TGG 0.637762 4.4:-46542490 None:intergenic
ATCTCTTTAACCATCGAGAG+AGG 0.639855 4.4:-46543908 None:intergenic
GGCACTGAACACTATAGGCG+TGG 0.643173 4.4:+46542384 MS.gene007767:CDS
TGAAAAGAGAAGGAAGGACA+AGG 0.644229 4.4:+46546695 MS.gene007767:CDS
CATCACCAAGTTTCACAGCA+TGG 0.653174 4.4:-46542413 None:intergenic
TGTGTATGACAGATAGCTCA+CGG 0.656661 4.4:-46543967 None:intergenic
AAGTCCAGAGGAATCTGGGG+AGG 0.664190 4.4:+46544216 MS.gene007767:CDS
AGGTTGTGTACTAGTCAGTG+AGG 0.667251 4.4:-46546649 None:intergenic
GGTTGTGTACTAGTCAGTGA+GGG 0.667334 4.4:-46546648 None:intergenic
GGGTGAGAAGATTATCACCA+AGG 0.668408 4.4:-46543856 None:intergenic
ACTGAACACTATAGGCGTGG+TGG 0.679549 4.4:+46542387 MS.gene007767:CDS
GGAAAGTCCAGAGGAATCTG+GGG 0.683129 4.4:+46544213 MS.gene007767:CDS
TGTTGAGACGGAAAGTCCAG+AGG 0.685820 4.4:+46544204 MS.gene007767:CDS
GAAGGAAAAGGGTAAGAGGG+TGG 0.689632 4.4:+46544171 MS.gene007767:CDS
TCACAAATGATATTCAAACA+AGG 0.699139 4.4:+46544482 MS.gene007767:CDS
TGAACAAGATGCAAATGACA+TGG 0.700027 4.4:+46546521 MS.gene007767:CDS
AGTTGGTGGAAGTTGGTGTG+AGG 0.701503 4.4:+46546733 MS.gene007767:CDS
TCATAGTTGTCACCACTGTG+AGG 0.714384 4.4:-46544616 None:intergenic
AAGGCAATATAGGTGTCCTG+AGG 0.731682 4.4:+46544501 MS.gene007767:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAAACTTTATATGATA+TGG - chr4.4:46545887-46545906 None:intergenic 10.0%
!! ATATAAACTTTATATGATAT+GGG - chr4.4:46545886-46545905 None:intergenic 10.0%
!!! TTAAATTTGTTCTATATTTT+TGG - chr4.4:46543071-46543090 None:intergenic 10.0%
!! AAAAAGTAATTTACTAAAGT+CGG - chr4.4:46545325-46545344 None:intergenic 15.0%
!! AAACAAAAACAACAAAAAAA+AGG - chr4.4:46542566-46542585 None:intergenic 15.0%
!! TAAATAAAGAAATTTAACCT+TGG + chr4.4:46545164-46545183 MS.gene007767:intron 15.0%
!! TATAATTTATAGTTTGACAA+TGG + chr4.4:46545472-46545491 MS.gene007767:intron 15.0%
!! TATGAAAAACAAAAAAAACT+AGG + chr4.4:46542981-46543000 MS.gene007767:intron 15.0%
!! TTAAAGAAAACAAAACAATA+GGG + chr4.4:46546310-46546329 MS.gene007767:intron 15.0%
!! TTCAAAATGCAAAATATATA+GGG + chr4.4:46542791-46542810 MS.gene007767:intron 15.0%
!!! AATTACTTTTTGAAAGAAAA+AGG + chr4.4:46545334-46545353 MS.gene007767:intron 15.0%
!!! GAAACTTTTAATTAAGTTAA+AGG + chr4.4:46545071-46545090 MS.gene007767:intron 15.0%
!!! GAACATTTTGAATTAATAAT+TGG + chr4.4:46545830-46545849 MS.gene007767:intron 15.0%
!!! TAGTTTTTTTTGTTTTTCAT+AGG - chr4.4:46542982-46543001 None:intergenic 15.0%
!!! TTTTTTGTTGTTTTTGTTTT+TGG + chr4.4:46542567-46542586 MS.gene007767:intron 15.0%
!! AAAATTTGAAAAGAATGCAT+TGG + chr4.4:46546033-46546052 MS.gene007767:intron 20.0%
!! AAACAATGAAGTTGTTAAAA+AGG - chr4.4:46542538-46542557 None:intergenic 20.0%
!! AAACAGAAAATAGTATGTTT+AGG - chr4.4:46545575-46545594 None:intergenic 20.0%
!! AACAGAAAATAGTATGTTTA+GGG - chr4.4:46545574-46545593 None:intergenic 20.0%
!! AATAACCAACCAAAAATTTA+AGG - chr4.4:46544808-46544827 None:intergenic 20.0%
!! AATAAGCAAAACAATTGTAA+AGG - chr4.4:46543408-46543427 None:intergenic 20.0%
!! ATAGTCACTATATTTGATAA+GGG - chr4.4:46543879-46543898 None:intergenic 20.0%
!! ATTATCCAAAACAGTAAAAT+TGG + chr4.4:46544112-46544131 MS.gene007767:CDS 20.0%
!! CTTAAAGAAAACAAAACAAT+AGG + chr4.4:46546309-46546328 MS.gene007767:intron 20.0%
!! GTTCAAAATGCAAAATATAT+AGG + chr4.4:46542790-46542809 MS.gene007767:intron 20.0%
!! TAAATTAAAGAGATAGATAC+AGG + chr4.4:46545978-46545997 MS.gene007767:intron 20.0%
!! TCGGTAGATAATTAAATATA+GGG - chr4.4:46545306-46545325 None:intergenic 20.0%
!! TTATCCAAAACAGTAAAATT+GGG + chr4.4:46544113-46544132 MS.gene007767:CDS 20.0%
!!! ACACCTTTTTTAATGATTTT+GGG + chr4.4:46545014-46545033 MS.gene007767:intron 20.0%
!!! ACAGTTTTGCATATATTTAA+AGG + chr4.4:46545102-46545121 MS.gene007767:intron 20.0%
!!! AGTTGCAGTTTTTTTTTTTT+TGG + chr4.4:46543113-46543132 MS.gene007767:intron 20.0%
!!! ATCCTTTGTATTATTTTACT+AGG - chr4.4:46545522-46545541 None:intergenic 20.0%
!!! ATGATATCTATTTGTTTTAC+AGG + chr4.4:46546078-46546097 MS.gene007767:intron 20.0%
!!! ATTGTTTTGTTTTCTTTAAG+CGG - chr4.4:46546309-46546328 None:intergenic 20.0%
!!! GGTGTAAAAAGAAATTTTTA+GGG + chr4.4:46542767-46542786 MS.gene007767:intron 20.0%
!!! GTGTAAAAAGAAATTTTTAG+GGG + chr4.4:46542768-46542787 MS.gene007767:intron 20.0%
!!! TAAAGAAATATTTTGATGCA+GGG - chr4.4:46543309-46543328 None:intergenic 20.0%
!!! TACACCTTTTTTAATGATTT+TGG + chr4.4:46545013-46545032 MS.gene007767:intron 20.0%
!!! TATTTTATGTAAATCTTGAG+AGG - chr4.4:46545914-46545933 None:intergenic 20.0%
!!! TGGTGTAAAAAGAAATTTTT+AGG + chr4.4:46542766-46542785 MS.gene007767:intron 20.0%
! AAAAGGTAAATGCTATACTT+TGG + chr4.4:46545351-46545370 MS.gene007767:intron 25.0%
! AAATATATGCAAAACTGTAC+CGG - chr4.4:46545100-46545119 None:intergenic 25.0%
! AAATCCAAAAATATCAGGTA+AGG - chr4.4:46543611-46543630 None:intergenic 25.0%
! AACATAATTTGGCTAAAACA+TGG + chr4.4:46545694-46545713 MS.gene007767:intron 25.0%
! AATAATTATATGCCAAGAGA+AGG + chr4.4:46545375-46545394 MS.gene007767:intron 25.0%
! AATCCAAAAATATCAGGTAA+GGG - chr4.4:46543610-46543629 None:intergenic 25.0%
! AATTGTAACAATGTGAAATC+TGG + chr4.4:46544262-46544281 MS.gene007767:CDS 25.0%
! ACAGAAAATAGTATGTTTAG+GGG - chr4.4:46545573-46545592 None:intergenic 25.0%
! ATAATACAAAGGATTTGTCT+AGG + chr4.4:46545528-46545547 MS.gene007767:intron 25.0%
! ATATTCAAACAAGGCAATAT+AGG + chr4.4:46544491-46544510 MS.gene007767:CDS 25.0%
! ATGTCTATTGAAAAAATCTC+GGG - chr4.4:46546427-46546446 None:intergenic 25.0%
! ATTCTCAAACAAATTGAAGA+GGG + chr4.4:46543740-46543759 MS.gene007767:CDS 25.0%
! CATGTCTATTGAAAAAATCT+CGG - chr4.4:46546428-46546447 None:intergenic 25.0%
! GACAAGCATGATAATATTAT+TGG - chr4.4:46545608-46545627 None:intergenic 25.0%
! GATAGTCACTATATTTGATA+AGG - chr4.4:46543880-46543899 None:intergenic 25.0%
! GTAGAAATAGTAATCAATGT+GGG + chr4.4:46542678-46542697 MS.gene007767:intron 25.0%
! GTCGGTAGATAATTAAATAT+AGG - chr4.4:46545307-46545326 None:intergenic 25.0%
! GTGAGGAATATATCTATTAA+TGG + chr4.4:46546750-46546769 MS.gene007767:CDS 25.0%
! TAAATCCAAAGTGAAGATAA+AGG + chr4.4:46545040-46545059 MS.gene007767:intron 25.0%
! TCACAAATGATATTCAAACA+AGG + chr4.4:46544482-46544501 MS.gene007767:CDS 25.0%
! TCGTAATTTCGTAATTACAA+TGG - chr4.4:46542645-46542664 None:intergenic 25.0%
! TGTAGAAATAGTAATCAATG+TGG + chr4.4:46542677-46542696 MS.gene007767:intron 25.0%
! TTAATTAAGTTAAAGGTTCC+CGG + chr4.4:46545078-46545097 MS.gene007767:intron 25.0%
! TTCAGAAATCCAAAAATATC+AGG - chr4.4:46543616-46543635 None:intergenic 25.0%
!! ATATGTTTTCATGTTCTAGT+GGG + chr4.4:46543929-46543948 MS.gene007767:CDS 25.0%
!! ATGATTGTAAAAGCATGAAA+AGG - chr4.4:46544849-46544868 None:intergenic 25.0%
!! CTCTTTTGTCCTTAAATTTT+TGG + chr4.4:46544796-46544815 MS.gene007767:intron 25.0%
!! GTGCTATTATTATTTGATGT+TGG + chr4.4:46544697-46544716 MS.gene007767:intron 25.0%
!!! ATTGCTATTTTGCAAATTTG+AGG + chr4.4:46543474-46543493 MS.gene007767:intron 25.0%
!!! ATTGCTTTTTAAAGTTTAGG+GGG + chr4.4:46542824-46542843 MS.gene007767:intron 25.0%
!!! CATTGCTTTTTAAAGTTTAG+GGG + chr4.4:46542823-46542842 MS.gene007767:intron 25.0%
!!! CATTTTATTTCCTATTCTCA+AGG - chr4.4:46543019-46543038 None:intergenic 25.0%
!!! CTAAAGAAATATTTTGATGC+AGG - chr4.4:46543310-46543329 None:intergenic 25.0%
!!! GCATTGCTTTTTAAAGTTTA+GGG + chr4.4:46542822-46542841 MS.gene007767:intron 25.0%
!!! GTTCAAACTTTTGAGTTATT+GGG + chr4.4:46542739-46542758 MS.gene007767:intron 25.0%
!!! TCATAGAAGAGTATGTATTT+TGG + chr4.4:46543188-46543207 MS.gene007767:intron 25.0%
!!! TCCATCAGAATCTTTTTTTT+CGG - chr4.4:46546486-46546505 None:intergenic 25.0%
!!! TGCATTGCTTTTTAAAGTTT+AGG + chr4.4:46542821-46542840 MS.gene007767:intron 25.0%
!!! TTGCTATTTCATATGTTTGA+GGG - chr4.4:46543247-46543266 None:intergenic 25.0%
!!! TTGCTATTTTGCAAATTTGA+GGG + chr4.4:46543475-46543494 MS.gene007767:intron 25.0%
!!! TTTGCTATTTCATATGTTTG+AGG - chr4.4:46543248-46543267 None:intergenic 25.0%
!!! TTTGTCCTTAAATTTTTGGT+TGG + chr4.4:46544800-46544819 MS.gene007767:intron 25.0%
AAAAAAACTGCAACTGCATA+TGG - chr4.4:46543108-46543127 None:intergenic 30.0%
AAATAGTAATCAATGTGGGT+TGG + chr4.4:46542682-46542701 MS.gene007767:intron 30.0%
AATAGTAATCAATGTGGGTT+GGG + chr4.4:46542683-46542702 MS.gene007767:intron 30.0%
AATATATGCAAAACTGTACC+GGG - chr4.4:46545099-46545118 None:intergenic 30.0%
ACAATGGAGATACTATTATG+GGG + chr4.4:46545488-46545507 MS.gene007767:intron 30.0%
AGAGAAGAAAATGAAGGAAA+AGG + chr4.4:46544159-46544178 MS.gene007767:CDS 30.0%
AGCATTCATTTGAAAAGAGA+AGG + chr4.4:46546685-46546704 MS.gene007767:CDS 30.0%
ATAGCAATTACCTTGAGAAT+AGG + chr4.4:46543006-46543025 MS.gene007767:intron 30.0%
ATCAAATATAGTGACTATCG+TGG + chr4.4:46543881-46543900 MS.gene007767:CDS 30.0%
ATCAACACAGACTATTGAAA+AGG + chr4.4:46544333-46544352 MS.gene007767:CDS 30.0%
ATTGACGTTCTTCAATGAAA+AGG - chr4.4:46543277-46543296 None:intergenic 30.0%
ATTGTTACAATTATCCTGCT+CGG - chr4.4:46544254-46544273 None:intergenic 30.0%
CAAAACAGTAAAATTGGGAA+TGG + chr4.4:46544118-46544137 MS.gene007767:CDS 30.0%
CAAATTCTTGTTGAAACAAC+AGG - chr4.4:46545720-46545739 None:intergenic 30.0%
CAGAAAATAGTATGTTTAGG+GGG - chr4.4:46545572-46545591 None:intergenic 30.0%
GAAACAAGAGAAGAAAATGA+AGG + chr4.4:46544153-46544172 MS.gene007767:CDS 30.0%
GACAATGGAGATACTATTAT+GGG + chr4.4:46545487-46545506 MS.gene007767:intron 30.0%
GAGAAGAAAATGAAGGAAAA+GGG + chr4.4:46544160-46544179 MS.gene007767:CDS 30.0%
GATTCTCAAACAAATTGAAG+AGG + chr4.4:46543739-46543758 MS.gene007767:CDS 30.0%
GGCCTAGTAAAATAATACAA+AGG + chr4.4:46545517-46545536 MS.gene007767:intron 30.0%
TAAAGATGTTCCACAAGAAT+GGG - chr4.4:46546013-46546032 None:intergenic 30.0%
TAGTCCCTAAAATCAAACAT+CGG - chr4.4:46543453-46543472 None:intergenic 30.0%
TAGTTTCTTAGTACGATACA+GGG - chr4.4:46544660-46544679 None:intergenic 30.0%
TATGTTGAGTCAAAACTTCT+AGG - chr4.4:46545960-46545979 None:intergenic 30.0%
TATGTTGTTCAATCTAAGCT+TGG + chr4.4:46542453-46542472 MS.gene007767:CDS 30.0%
TCTGAACTCTGTTAATGATT+TGG + chr4.4:46543630-46543649 MS.gene007767:intron 30.0%
TGACAATGGAGATACTATTA+TGG + chr4.4:46545486-46545505 MS.gene007767:intron 30.0%
TGGAACTGGAAAACATAATT+TGG + chr4.4:46545683-46545702 MS.gene007767:intron 30.0%
TTAAAGATGTTCCACAAGAA+TGG - chr4.4:46546014-46546033 None:intergenic 30.0%
TTATGAATGCACAATTTCCA+AGG - chr4.4:46545184-46545203 None:intergenic 30.0%
TTCATTTGAAAAGAGAAGGA+AGG + chr4.4:46546689-46546708 MS.gene007767:CDS 30.0%
TTGACGTTCTTCAATGAAAA+GGG - chr4.4:46543276-46543295 None:intergenic 30.0%
TTTGGACAGAAAATCGTTAA+AGG - chr4.4:46544878-46544897 None:intergenic 30.0%
! AAAATGTGTTGTGAAGCTTT+TGG + chr4.4:46543778-46543797 MS.gene007767:CDS 30.0%
! CATTCCCAATTTTACTGTTT+TGG - chr4.4:46544120-46544139 None:intergenic 30.0%
! CTGCATTTCATTCTGAAAAT+TGG + chr4.4:46546342-46546361 MS.gene007767:intron 30.0%
! GATATGTTTTCATGTTCTAG+TGG + chr4.4:46543928-46543947 MS.gene007767:CDS 30.0%
! TGTATGGTTTTTGAATTCCT+TGG + chr4.4:46543839-46543858 MS.gene007767:CDS 30.0%
! TTACCCTTACCTGATATTTT+TGG + chr4.4:46543604-46543623 MS.gene007767:intron 30.0%
!! ATTGACCGATGTTTGATTTT+AGG + chr4.4:46543445-46543464 MS.gene007767:intron 30.0%
!! CAAAATCAAGTATTGGAAGA+AGG - chr4.4:46546554-46546573 None:intergenic 30.0%
!! TTGACCGATGTTTGATTTTA+GGG + chr4.4:46543446-46543465 MS.gene007767:intron 30.0%
!! TTTTTGTTTGTAGCGTTATG+TGG + chr4.4:46543658-46543677 MS.gene007767:intron 30.0%
!!! ACAACACATTTTTTGTCATC+AGG - chr4.4:46543770-46543789 None:intergenic 30.0%
!!! ATTTGTTTTACAGGATCATC+TGG + chr4.4:46546087-46546106 MS.gene007767:intron 30.0%
!!! CAACACATTTTTTGTCATCA+GGG - chr4.4:46543769-46543788 None:intergenic 30.0%
!!! CCTTTTTTAATGATTTTGGG+CGG + chr4.4:46545017-46545036 MS.gene007767:intron 30.0%
!!! CGAGATTTTTTCAATAGACA+TGG + chr4.4:46546426-46546445 MS.gene007767:CDS 30.0%
!!! GGTTCAAACTTTTGAGTTAT+TGG + chr4.4:46542738-46542757 MS.gene007767:intron 30.0%
!!! TTGATTTTGGTAATGCTTGT+TGG + chr4.4:46544446-46544465 MS.gene007767:CDS 30.0%
!!! TTTTTTATCTTGTGCCCTTA+GGG - chr4.4:46545143-46545162 None:intergenic 30.0%
AAAGTTTGAACCTCTAGATC+AGG - chr4.4:46542730-46542749 None:intergenic 35.0%
AAATGAAGGAAAAGGGTAAG+AGG + chr4.4:46544167-46544186 MS.gene007767:CDS 35.0%
AAGTTTGAACCTCTAGATCA+GGG - chr4.4:46542729-46542748 None:intergenic 35.0%
AATGAAGGAAAAGGGTAAGA+GGG + chr4.4:46544168-46544187 MS.gene007767:CDS 35.0%
AGTTTCTTAGTACGATACAG+GGG - chr4.4:46544659-46544678 None:intergenic 35.0%
ATCAAAAAGAACATCACCAG+TGG - chr4.4:46544596-46544615 None:intergenic 35.0%
ATCTTCATCAAACACGAGTT+AGG - chr4.4:46543568-46543587 None:intergenic 35.0%
ATGCTTGTCTTAATTCAGCA+AGG - chr4.4:46543381-46543400 None:intergenic 35.0%
ATGTGTTCATCGTTGATATC+GGG + chr4.4:46542603-46542622 MS.gene007767:intron 35.0%
CAGATCCTTTATCTTCACTT+TGG - chr4.4:46545048-46545067 None:intergenic 35.0%
CCGCCCAAAATCATTAAAAA+AGG - chr4.4:46545020-46545039 None:intergenic 35.0%
CTCAACCTTTACAAATTTCC+AGG - chr4.4:46543215-46543234 None:intergenic 35.0%
GAATGAAGTAACACATTCTC+AGG - chr4.4:46544004-46544023 None:intergenic 35.0%
GATACTATTATGGGGTTCTA+AGG + chr4.4:46545496-46545515 MS.gene007767:intron 35.0%
GATGTGTTCATCGTTGATAT+CGG + chr4.4:46542602-46542621 MS.gene007767:intron 35.0%
GATTACAGTTCAGAAGATGA+AGG + chr4.4:46542363-46542382 MS.gene007767:CDS 35.0%
GCCGAAAAAAAAGATTCTGA+TGG + chr4.4:46546482-46546501 MS.gene007767:CDS 35.0%
GTAGTTTCTTAGTACGATAC+AGG - chr4.4:46544661-46544680 None:intergenic 35.0%
TCAGGGTCAAAATCAAGTAT+TGG - chr4.4:46546561-46546580 None:intergenic 35.0%
TCATTTATCAATCCAGTGAG+AGG - chr4.4:46546062-46546081 None:intergenic 35.0%
TCTAGTCCTTCAAATTGTCA+GGG - chr4.4:46543515-46543534 None:intergenic 35.0%
TGAAAAAATCTCGGGAATAG+CGG - chr4.4:46546419-46546438 None:intergenic 35.0%
TGAACAAGATGCAAATGACA+TGG + chr4.4:46546521-46546540 MS.gene007767:CDS 35.0%
TGCTTGTCTTAATTCAGCAA+GGG - chr4.4:46543380-46543399 None:intergenic 35.0%
TGGATCACTTTAAGCATTCA+GGG + chr4.4:46543798-46543817 MS.gene007767:CDS 35.0%
TGTTCAATCTAAGCTTGGTT+GGG + chr4.4:46542458-46542477 MS.gene007767:CDS 35.0%
TTCTAGTCCTTCAAATTGTC+AGG - chr4.4:46543516-46543535 None:intergenic 35.0%
TTGGATCACTTTAAGCATTC+AGG + chr4.4:46543797-46543816 MS.gene007767:CDS 35.0%
TTGGTCCTGGAAATTTGTAA+AGG + chr4.4:46543207-46543226 MS.gene007767:intron 35.0%
TTGTTACAATTATCCTGCTC+GGG - chr4.4:46544253-46544272 None:intergenic 35.0%
TTGTTCAATCTAAGCTTGGT+TGG + chr4.4:46542457-46542476 MS.gene007767:CDS 35.0%
! CGCGCTCTTTTGAATTTTAA+GGG - chr4.4:46543684-46543703 None:intergenic 35.0%
! TTAAAAAAGGTGTATGCTGC+TGG - chr4.4:46545007-46545026 None:intergenic 35.0%
! TTCTTCTCTTGTTTCTTCGT+CGG - chr4.4:46544148-46544167 None:intergenic 35.0%
! TTTTCATAGGTTTACTCCAC+TGG - chr4.4:46542969-46542988 None:intergenic 35.0%
!! AAATGTTAACTTGTGCCCTA+AGG - chr4.4:46545283-46545302 None:intergenic 35.0%
!! AATGTTAACTTGTGCCCTAA+GGG - chr4.4:46545282-46545301 None:intergenic 35.0%
!! CGATTCTAAGATCATCAACA+GGG - chr4.4:46545777-46545796 None:intergenic 35.0%
!! TCGATTCTAAGATCATCAAC+AGG - chr4.4:46545778-46545797 None:intergenic 35.0%
!! TGTTGATGATCTTAGAATCG+AGG + chr4.4:46545777-46545796 MS.gene007767:intron 35.0%
!! TTGATTTTGACCCTGAAAAG+AGG + chr4.4:46546565-46546584 MS.gene007767:CDS 35.0%
!!! AAGAGTATGTATTTTGGTCC+TGG + chr4.4:46543194-46543213 MS.gene007767:intron 35.0%
!!! CATGCACTTTTTTCACAGTT+TGG - chr4.4:46544896-46544915 None:intergenic 35.0%
!!! GTTTTTTATCTTGTGCCCTT+AGG - chr4.4:46545144-46545163 None:intergenic 35.0%
ACAGTGGTGACAACTATGAT+AGG + chr4.4:46544620-46544639 MS.gene007767:CDS 40.0%
ACCTTTACTCGAAGAGCTAT+TGG - chr4.4:46544311-46544330 None:intergenic 40.0%
ACTGCAACTGCATATGGATA+TGG - chr4.4:46543102-46543121 None:intergenic 40.0%
ATCCTTATCTTGTGCCCTTA+GGG + chr4.4:46545265-46545284 MS.gene007767:intron 40.0%
ATCTCTTTAACCATCGAGAG+AGG - chr4.4:46543911-46543930 None:intergenic 40.0%
ATGATATGGGCTTCAAGTCT+CGG - chr4.4:46545873-46545892 None:intergenic 40.0%
ATTATATGCCAAGAGAAGGC+TGG + chr4.4:46545379-46545398 MS.gene007767:intron 40.0%
CAGTGGTGACAACTATGATA+GGG + chr4.4:46544621-46544640 MS.gene007767:CDS 40.0%
CCTTTACTCGAAGAGCTATT+GGG - chr4.4:46544310-46544329 None:intergenic 40.0%
GATAACTTTCCTACCTTGCT+AGG - chr4.4:46546142-46546161 None:intergenic 40.0%
GATTTCCTTGGATCCTTTGA+CGG - chr4.4:46544037-46544056 None:intergenic 40.0%
GCGAAACAAGGTTTGAATCT+CGG + chr4.4:46542894-46542913 MS.gene007767:intron 40.0%
GTTCAATCTAAGCTTGGTTG+GGG + chr4.4:46542459-46542478 MS.gene007767:CDS 40.0%
GTTCCAAATGCTAAGCACAA+AGG - chr4.4:46545669-46545688 None:intergenic 40.0%
TATTTCCTGCAGATTGCACT+TGG + chr4.4:46546390-46546409 MS.gene007767:intron 40.0%
TCAAAGGATCCAAGGAAATC+AGG + chr4.4:46544037-46544056 MS.gene007767:CDS 40.0%
TCAATAGACATGGTGACTTG+AGG + chr4.4:46546436-46546455 MS.gene007767:CDS 40.0%
TCTCCTTTGTGCTTAGCATT+TGG + chr4.4:46545663-46545682 MS.gene007767:intron 40.0%
TGAAAAGAGAAGGAAGGACA+AGG + chr4.4:46546695-46546714 MS.gene007767:CDS 40.0%
TGACAACTATGATAGGGATG+AGG + chr4.4:46544627-46544646 MS.gene007767:CDS 40.0%
TGCTTGGGATACTCTCAAAT+CGG + chr4.4:46542503-46542522 MS.gene007767:CDS 40.0%
TGTGTATGACAGATAGCTCA+CGG - chr4.4:46543970-46543989 None:intergenic 40.0%
TGTTCTACTCAATTGAGCAG+CGG - chr4.4:46544979-46544998 None:intergenic 40.0%
TGTTGATCTTAAGTGCAAGC+TGG + chr4.4:46544423-46544442 MS.gene007767:CDS 40.0%
TTAGAACCAAGAAGAACCTC+AGG - chr4.4:46544520-46544539 None:intergenic 40.0%
TTATATGCCAAGAGAAGGCT+GGG + chr4.4:46545380-46545399 MS.gene007767:intron 40.0%
TTCGTGTTTGGAAGGATAAG+TGG - chr4.4:46544067-46544086 None:intergenic 40.0%
TTTAAGCATTCAGGGCCTAA+TGG + chr4.4:46543806-46543825 MS.gene007767:CDS 40.0%
! AGAATCTAGCTCATTTGAGG+TGG - chr4.4:46542860-46542879 None:intergenic 40.0%
! GAATGCTCATTGATTGCATC+AGG - chr4.4:46546672-46546691 None:intergenic 40.0%
! GCGCGCTCTTTTGAATTTTA+AGG - chr4.4:46543685-46543704 None:intergenic 40.0%
! GGAAGAATCTAGCTCATTTG+AGG - chr4.4:46542863-46542882 None:intergenic 40.0%
! GTTCTTTTTGATCCTCACAG+TGG + chr4.4:46544604-46544623 MS.gene007767:CDS 40.0%
! TGAGTGTTTTCTGAACAGAG+TGG + chr4.4:46544770-46544789 MS.gene007767:intron 40.0%
! TTCACTGATTGATCCGTCAA+AGG + chr4.4:46544021-46544040 MS.gene007767:CDS 40.0%
! TTCTTATGACTGTCGTTTCC+TGG - chr4.4:46544367-46544386 None:intergenic 40.0%
! TTGTGCTTAGCATTTGGAAC+TGG + chr4.4:46545669-46545688 MS.gene007767:intron 40.0%
!! AAGTGCAAGCTGGTTGATTT+TGG + chr4.4:46544433-46544452 MS.gene007767:CDS 40.0%
!! ATGAAGGCACTGAACACTAT+AGG + chr4.4:46542379-46542398 MS.gene007767:CDS 40.0%
!! ATGTTGATGACTTTACGGGT+CGG - chr4.4:46546800-46546819 None:intergenic 40.0%
!! CTTGGTGATGCTTTCAACAA+TGG + chr4.4:46542426-46542445 MS.gene007767:CDS 40.0%
!! CTTGTTAACTTGTGCCCTAA+GGG + chr4.4:46545126-46545145 MS.gene007767:intron 40.0%
!! GCATTGATGATGGAACTTCT+TGG + chr4.4:46546109-46546128 MS.gene007767:CDS 40.0%
!! TCTTGTTAACTTGTGCCCTA+AGG + chr4.4:46545125-46545144 MS.gene007767:intron 40.0%
!!! CTTTTGAGTTATTGGGCTAG+TGG + chr4.4:46542746-46542765 MS.gene007767:intron 40.0%
!!! TTTTCATGTTCTAGTGGGCT+TGG + chr4.4:46543934-46543953 MS.gene007767:CDS 40.0%
AACAAGGTTTGAATCTCGGC+TGG + chr4.4:46542898-46542917 MS.gene007767:intron 45.0%
AAGGCAATATAGGTGTCCTG+AGG + chr4.4:46544501-46544520 MS.gene007767:CDS 45.0%
ACAAGGTTTGAATCTCGGCT+GGG + chr4.4:46542899-46542918 MS.gene007767:intron 45.0%
ACACTACACTGAAGCTGCAA+TGG + chr4.4:46543706-46543725 MS.gene007767:CDS 45.0%
ACCTGCACTTATCCATGGAT+GGG - chr4.4:46546613-46546632 None:intergenic 45.0%
ACTCAACTCCAGCAGATATG+TGG + chr4.4:46544542-46544561 MS.gene007767:CDS 45.0%
ACTGCCTCATTCTTCGTGTT+TGG - chr4.4:46544079-46544098 None:intergenic 45.0%
AGGAAAGTTATCTGCTCTGG+TGG + chr4.4:46546150-46546169 MS.gene007767:intron 45.0%
AGGTTGTGTACTAGTCAGTG+AGG - chr4.4:46546652-46546671 None:intergenic 45.0%
ATACACACATGCACGCCATT+AGG - chr4.4:46543824-46543843 None:intergenic 45.0%
ATTGAAAAGGACCTTGCACC+AGG + chr4.4:46544346-46544365 MS.gene007767:CDS 45.0%
CACTTATCCATGGATGGGTA+AGG - chr4.4:46546608-46546627 None:intergenic 45.0%
CATCACCAAGTTTCACAGCA+TGG - chr4.4:46542416-46542435 None:intergenic 45.0%
CCCAATAGCTCTTCGAGTAA+AGG + chr4.4:46544307-46544326 MS.gene007767:CDS 45.0%
CCTCATTCTTCGTGTTTGGA+AGG - chr4.4:46544075-46544094 None:intergenic 45.0%
CCTTCCAAACACGAAGAATG+AGG + chr4.4:46544072-46544091 MS.gene007767:CDS 45.0%
CTCAAAGCAGATGCAAGCAA+AGG - chr4.4:46544569-46544588 None:intergenic 45.0%
GAGAAGGAAGGACAAGGAAA+AGG + chr4.4:46546701-46546720 MS.gene007767:CDS 45.0%
GATCCTTATCTTGTGCCCTT+AGG + chr4.4:46545264-46545283 MS.gene007767:intron 45.0%
GCAGCTTCTTTCTCATGGAA+CGG - chr4.4:46544396-46544415 None:intergenic 45.0%
GGATTATTTCCAGACTCCAG+TGG + chr4.4:46542950-46542969 MS.gene007767:intron 45.0%
GGGTGAGAAGATTATCACCA+AGG - chr4.4:46543859-46543878 None:intergenic 45.0%
GGTAGGAAAGTTATCTGCTC+TGG + chr4.4:46546147-46546166 MS.gene007767:intron 45.0%
GGTTGTGTACTAGTCAGTGA+GGG - chr4.4:46546651-46546670 None:intergenic 45.0%
GTCAAAGCTTCCCATTCTTG+TGG + chr4.4:46546000-46546019 MS.gene007767:intron 45.0%
GTCCTTCAAATTGTCAGGGT+CGG - chr4.4:46543511-46543530 None:intergenic 45.0%
TAATGGCGTGCATGTGTGTA+TGG + chr4.4:46543823-46543842 MS.gene007767:CDS 45.0%
TATTCAGGACCCTGATCTAG+AGG + chr4.4:46542717-46542736 MS.gene007767:intron 45.0%
TCATAGTTGTCACCACTGTG+AGG - chr4.4:46544619-46544638 None:intergenic 45.0%
TCTTGGAAAGATGCCTAGCA+AGG + chr4.4:46546126-46546145 MS.gene007767:CDS 45.0%
TGCTGGTACTCGATCAAAGT+TGG + chr4.4:46544917-46544936 MS.gene007767:intron 45.0%
TGGGATACTCTCAAATCGGT+GGG + chr4.4:46542507-46542526 MS.gene007767:intron 45.0%
TTCCATGAGAAAGAAGCTGC+TGG + chr4.4:46544396-46544415 MS.gene007767:CDS 45.0%
TTGATCCGTCAAAGGATCCA+AGG + chr4.4:46544029-46544048 MS.gene007767:CDS 45.0%
TTGGGATACTCTCAAATCGG+TGG + chr4.4:46542506-46542525 MS.gene007767:intron 45.0%
! AAAAGGTGTATGCTGCTGGT+TGG - chr4.4:46545003-46545022 None:intergenic 45.0%
! CAAACCTTGTTTCGCCACAT+GGG - chr4.4:46542889-46542908 None:intergenic 45.0%
! GTGAAAAAAGTGCATGCTGC+TGG + chr4.4:46544900-46544919 MS.gene007767:intron 45.0%
! TCAAACCTTGTTTCGCCACA+TGG - chr4.4:46542890-46542909 None:intergenic 45.0%
!! GGATCATCTGGCATTGATGA+TGG + chr4.4:46546099-46546118 MS.gene007767:intron 45.0%
!! TGTTGATGACTTTACGGGTC+GGG - chr4.4:46546799-46546818 None:intergenic 45.0%
!! TTCCACTGTTTGGCTTGCTT+GGG + chr4.4:46542488-46542507 MS.gene007767:CDS 45.0%
!! TTTCCACTGTTTGGCTTGCT+TGG + chr4.4:46542487-46542506 MS.gene007767:CDS 45.0%
!!! CGGGAGTTTTTGAGTGACAT+AGG - chr4.4:46546780-46546799 None:intergenic 45.0%
!!! GGGGTCATTTTTCCACTGTT+TGG + chr4.4:46542478-46542497 MS.gene007767:CDS 45.0%
AACTTCCACCAACTCCTGCT+CGG - chr4.4:46546727-46546746 None:intergenic 50.0%
ACATCCGTGAGTTGCGATTC+TGG + chr4.4:46546460-46546479 MS.gene007767:CDS 50.0%
ACCCACATTTGTGTCTGACG+CGG + chr4.4:46542928-46542947 MS.gene007767:intron 50.0%
ACCCATCCATGGATAAGTGC+AGG + chr4.4:46546609-46546628 MS.gene007767:CDS 50.0%
ACGGAAAGTCCAGAGGAATC+TGG + chr4.4:46544211-46544230 MS.gene007767:CDS 50.0%
ACTGAACACTATAGGCGTGG+TGG + chr4.4:46542387-46542406 MS.gene007767:CDS 50.0%
AGGTGTCCTGAGGTTCTTCT+TGG + chr4.4:46544511-46544530 MS.gene007767:CDS 50.0%
AGGTTTACTCCACTGGAGTC+TGG - chr4.4:46542962-46542981 None:intergenic 50.0%
ATCCCAAGCAAGCCAAACAG+TGG - chr4.4:46542493-46542512 None:intergenic 50.0%
CGGAAAGTCCAGAGGAATCT+GGG + chr4.4:46544212-46544231 MS.gene007767:CDS 50.0%
CTGAACACTATAGGCGTGGT+GGG + chr4.4:46542388-46542407 MS.gene007767:CDS 50.0%
GAAGGAAAAGGGTAAGAGGG+TGG + chr4.4:46544171-46544190 MS.gene007767:CDS 50.0%
GACCGACCCTGACAATTTGA+AGG + chr4.4:46543506-46543525 MS.gene007767:intron 50.0%
GACCTGCACTTATCCATGGA+TGG - chr4.4:46546614-46546633 None:intergenic 50.0%
GCAAAGGACCACATATCTGC+TGG - chr4.4:46544553-46544572 None:intergenic 50.0%
GGAAAGATGCCTAGCAAGGT+AGG + chr4.4:46546130-46546149 MS.gene007767:intron 50.0%
GGAAAGTCCAGAGGAATCTG+GGG + chr4.4:46544213-46544232 MS.gene007767:CDS 50.0%
GGATTGTAAAGAACCCGAGC+AGG + chr4.4:46544237-46544256 MS.gene007767:CDS 50.0%
GGCTCAAGGTTGTGTTGAGA+CGG + chr4.4:46544192-46544211 MS.gene007767:CDS 50.0%
GGGTACCATGCTGTGAAACT+TGG + chr4.4:46542408-46542427 MS.gene007767:CDS 50.0%
TAGATTCTTCCCTGCCCATG+TGG + chr4.4:46542872-46542891 MS.gene007767:intron 50.0%
TATCTCACCCAGCCTTCTCT+TGG - chr4.4:46545390-46545409 None:intergenic 50.0%
TGCCAGCAGCTTCTTTCTCA+TGG - chr4.4:46544401-46544420 None:intergenic 50.0%
TGTTGAGACGGAAAGTCCAG+AGG + chr4.4:46544204-46544223 MS.gene007767:CDS 50.0%
TTCCTGCAGATTGCACTTGG+TGG + chr4.4:46546393-46546412 MS.gene007767:intron 50.0%
! AGTGGAGCACCTGATTTCCT+TGG - chr4.4:46544049-46544068 None:intergenic 50.0%
! ATCTGCTTTGAGCTTGCCAC+TGG + chr4.4:46544577-46544596 MS.gene007767:CDS 50.0%
! TGCCCTAAGGGCACAAGATA+AGG - chr4.4:46545157-46545138 None:intergenic 50.0%
!! AGTTGGTGGAAGTTGGTGTG+AGG + chr4.4:46546733-46546752 MS.gene007767:CDS 50.0%
!! ATGCATTGGCTTCCTCTCAC+TGG + chr4.4:46546047-46546066 MS.gene007767:intron 50.0%
!! CAGCTGTTGGCCTCTTTTCA+GGG - chr4.4:46546578-46546597 None:intergenic 50.0%
AAGGGTAAGAGGGTGGCTCA+AGG + chr4.4:46544178-46544197 MS.gene007767:CDS 55.0%
AAGTCCAGAGGAATCTGGGG+AGG + chr4.4:46544216-46544235 MS.gene007767:CDS 55.0%
AATTGAGCAGCGGCACTGCT+GGG - chr4.4:46544969-46544988 None:intergenic 55.0%
ACTGCTGGGAGCTGTAGAGA+CGG - chr4.4:46544955-46544974 None:intergenic 55.0%
AGTGAGGGCTCAAGAGTTCG+AGG - chr4.4:46546636-46546655 None:intergenic 55.0%
CAATCCTCCCCAGATTCCTC+TGG - chr4.4:46544223-46544242 None:intergenic 55.0%
CCCACATTTGTGTCTGACGC+GGG + chr4.4:46542929-46542948 MS.gene007767:intron 55.0%
CCCGCGTCAGACACAAATGT+GGG - chr4.4:46542932-46542951 None:intergenic 55.0%
CGAGGACCTGCACTTATCCA+TGG - chr4.4:46546618-46546637 None:intergenic 55.0%
CGATCAAAGTTGGCTGCTGC+TGG + chr4.4:46544927-46544946 MS.gene007767:intron 55.0%
CTCAGTGCCTTACCCATCCA+TGG + chr4.4:46546598-46546617 MS.gene007767:CDS 55.0%
CTTGTTTCGCCACATGGGCA+GGG - chr4.4:46542884-46542903 None:intergenic 55.0%
TCCCGCGTCAGACACAAATG+TGG - chr4.4:46542933-46542952 None:intergenic 55.0%
TCGGCCAGAATCGCAACTCA+CGG - chr4.4:46546467-46546486 None:intergenic 55.0%
TCGTGGAGTTCCTCTCTCGA+TGG + chr4.4:46543898-46543917 MS.gene007767:CDS 55.0%
TGGGTACCAGTGGCGTATTC+AGG + chr4.4:46542702-46542721 MS.gene007767:intron 55.0%
! GACTGTCGTTTCCTGGTGCA+AGG - chr4.4:46544360-46544379 None:intergenic 55.0%
! GGCACTGAACACTATAGGCG+TGG + chr4.4:46542384-46542403 MS.gene007767:CDS 55.0%
!! CAATGTGGGTTGGGTACCAG+TGG + chr4.4:46542692-46542711 MS.gene007767:intron 55.0%
!! GAGCAGGAGTTGGTGGAAGT+TGG + chr4.4:46546726-46546745 MS.gene007767:CDS 55.0%
!! GCAGCTGTTGGCCTCTTTTC+AGG - chr4.4:46546579-46546598 None:intergenic 55.0%
!! GTAAGGCACTGAGCAGCTGT+TGG - chr4.4:46546591-46546610 None:intergenic 55.0%
AAAGGCCGAGCAGGAGTTGG+TGG + chr4.4:46546719-46546738 MS.gene007767:CDS 60.0%
CAATTGAGCAGCGGCACTGC+TGG - chr4.4:46544970-46544989 None:intergenic 60.0%
CAGGGTCCTGAATACGCCAC+TGG - chr4.4:46542711-46542730 None:intergenic 60.0%
CCTGCCCATGTGGCGAAACA+AGG + chr4.4:46542882-46542901 MS.gene007767:intron 60.0%
GGAAAAGGCCGAGCAGGAGT+TGG + chr4.4:46546716-46546735 MS.gene007767:CDS 60.0%
GGACAAGGAAAAGGCCGAGC+AGG + chr4.4:46546710-46546729 MS.gene007767:CDS 60.0%
GGCCACCAAGTGCAATCTGC+AGG - chr4.4:46546398-46546417 None:intergenic 60.0%
! CCTTGTTTCGCCACATGGGC+AGG - chr4.4:46542885-46542904 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 46542339 46546821 46542339 ID=MS.gene007767
chr4.4 mRNA 46542339 46546821 46542339 ID=MS.gene007767.t1;Parent=MS.gene007767
chr4.4 exon 46542339 46542524 46542339 ID=MS.gene007767.t1.exon1;Parent=MS.gene007767.t1
chr4.4 CDS 46542339 46542524 46542339 ID=cds.MS.gene007767.t1;Parent=MS.gene007767.t1
chr4.4 exon 46543671 46544648 46543671 ID=MS.gene007767.t1.exon2;Parent=MS.gene007767.t1
chr4.4 CDS 46543671 46544648 46543671 ID=cds.MS.gene007767.t1;Parent=MS.gene007767.t1
chr4.4 exon 46546100 46546147 46546100 ID=MS.gene007767.t1.exon3;Parent=MS.gene007767.t1
chr4.4 CDS 46546100 46546147 46546100 ID=cds.MS.gene007767.t1;Parent=MS.gene007767.t1
chr4.4 exon 46546402 46546821 46546402 ID=MS.gene007767.t1.exon4;Parent=MS.gene007767.t1
chr4.4 CDS 46546402 46546821 46546402 ID=cds.MS.gene007767.t1;Parent=MS.gene007767.t1
Gene Sequence

>MS.gene007767

ATGGAGAGAAAAGGAATCAACAATGATTACAGTTCAGAAGATGAAGGCACTGAACACTATAGGCGTGGTGGGTACCATGCTGTGAAACTTGGTGATGCTTTCAACAATGGCTGCTATGTTGTTCAATCTAAGCTTGGTTGGGGTCATTTTTCCACTGTTTGGCTTGCTTGGGATACTCTCAAATCGGTGGGTGTTTCCTTTTTAACAACTTCATTGTTTTCTTACCTTTTTTTTGTTGTTTTTGTTTTTGGAATTTGTTGTTTGATGTGTTCATCGTTGATATCGGGTATCATTAGAGTTTTTCCATTGTAATTACGAAATTACGACTTTGATTTTGATGTAGAAATAGTAATCAATGTGGGTTGGGTACCAGTGGCGTATTCAGGACCCTGATCTAGAGGTTCAAACTTTTGAGTTATTGGGCTAGTGGTGTAAAAAGAAATTTTTAGGGGTTCAAAATGCAAAATATATAGGGTTATATTTGCATTGCTTTTTAAAGTTTAGGGGGTTCAATTGATCCACCTCAAATGAGCTAGATTCTTCCCTGCCCATGTGGCGAAACAAGGTTTGAATCTCGGCTGGGAGAGTTACCCACATTTGTGTCTGACGCGGGATTATTTCCAGACTCCAGTGGAGTAAACCTATGAAAAACAAAAAAAACTAGGAAATAGCAATTACCTTGAGAATAGGAAATAAAATGATAAAAATGTGATGTTTTTGTAAATATTACCAAAAATATAGAACAAATTTAAATACATATCCATATCCATATGCAGTTGCAGTTTTTTTTTTTTTGGTAATGATGCAGACTTGATATCACATTAGTATCAATATTCAATACTAGTGAAATCATAGAAGAGTATGTATTTTGGTCCTGGAAATTTGTAAAGGTTGAGCAATGTAGTCCCTCAAACATATGAAATAGCAAATTAGTCCCTTTTCATTGAAGAACGTCAATCAATTTTGTCCCTGCATCAAAATATTTCTTTAGTAAATATGCATCAAAATACAAAAGACTGACAAGTTGACTTGAATATTCCCTTGCTGAATTAAGACAAGCATACAACCTTTACAATTGTTTTGCTTATTTTCGAAAAAAAGACTAAATTGACCGATGTTTGATTTTAGGGACTAAATTGCTATTTTGCAAATTTGAGGGACGAAATTGACCGACCCTGACAATTTGAAGGACTAGAATGTTGATTCACTCAACATAGAACAAACTTCCTAACTCGTGTTTGATGAAGATCTGATAACAAATTACATTACCCTTACCTGATATTTTTGGATTTCTGAACTCTGTTAATGATTTGGAAAGTTTTTTGTTTGTAGCGTTATGTGGCCCTTAAAATTCAAAAGAGCGCGCAACACTACACTGAAGCTGCAATGGATGAAATAAAGATTCTCAAACAAATTGAAGAGGGAGACCCTGATGACAAAAAATGTGTTGTGAAGCTTTTGGATCACTTTAAGCATTCAGGGCCTAATGGCGTGCATGTGTGTATGGTTTTTGAATTCCTTGGTGATAATCTTCTCACCCTTATCAAATATAGTGACTATCGTGGAGTTCCTCTCTCGATGGTTAAAGAGATATGTTTTCATGTTCTAGTGGGCTTGGATTACTTGCACCGTGAGCTATCTGTCATACACACTGATTTGAAGCCTGAGAATGTGTTACTTCATTCACTGATTGATCCGTCAAAGGATCCAAGGAAATCAGGTGCTCCACTTATCCTTCCAAACACGAAGAATGAGGCAGTGTCTAATAATGACATTATCCAAAACAGTAAAATTGGGAATGGAGATCCGACGAAGAAACAAGAGAAGAAAATGAAGGAAAAGGGTAAGAGGGTGGCTCAAGGTTGTGTTGAGACGGAAAGTCCAGAGGAATCTGGGGAGGATTGTAAAGAACCCGAGCAGGATAATTGTAACAATGTGAAATCTGGTGTAGAATCTGTTGAAAACAAACCCAATAGCTCTTCGAGTAAAGGTGAATCAACACAGACTATTGAAAAGGACCTTGCACCAGGAAACGACAGTCATAAGAAAAGTAGCCGTTCCATGAGAAAGAAGCTGCTGGCAGCTGTTGATCTTAAGTGCAAGCTGGTTGATTTTGGTAATGCTTGTTGGACATATAAACAGTTCACAAATGATATTCAAACAAGGCAATATAGGTGTCCTGAGGTTCTTCTTGGTTCTAAATACTCAACTCCAGCAGATATGTGGTCCTTTGCTTGCATCTGCTTTGAGCTTGCCACTGGTGATGTTCTTTTTGATCCTCACAGTGGTGACAACTATGATAGGGATGAGGCAAGTTCCCCTGTATCGTACTAAGAAACTACTGTTTTGCTTTATTTTGTGCTATTATTATTTGATGTTGGTAAATTTAATTGTGATGATCTTTATTAGTCTTTGAAAACTGATTTGCTACTGAGTGTTTTCTGAACAGAGTGGAAGCTCTTTTGTCCTTAAATTTTTGGTTGGTTATTATACAACTTATTGTTCAACCTTTTCATGCTTTTACAATCATTTACTACCTTTAACGATTTTCTGTCCAAACTGTGAAAAAAGTGCATGCTGCTGGTACTCGATCAAAGTTGGCTGCTGCTGGTACCGTCTCTACAGCTCCCAGCAGTGCCGCTGCTCAATTGAGTAGAACATCCAACCAGCAGCATACACCTTTTTTAATGATTTTGGGCGGTAAATCCAAAGTGAAGATAAAGGATCTGTTTGAAACTTTTAATTAAGTTAAAGGTTCCCGGTACAGTTTTGCATATATTTAAAGGTCTTGTTAACTTGTGCCCTAAGGGCACAAGATAAAAAACTAAATAAAGAAATTTAACCTTGGAAATTGTGCATTCATAATCTTAAAAGTTCAAAAACTTATATTTTCAATACAATATTTATTGTTTGTTTCTATTTTAAGATCCTTATCTTGTGCCCTTAGGGCACAAGTTAACATTTCCCTATATTTAATTATCTACCGACTTTAGTAAATTACTTTTTGAAAGAAAAAGGTAAATGCTATACTTTGGAAATAATTATATGCCAAGAGAAGGCTGGGTGAGATAGTTCTTCTATCTAGATAGAGCTTTAAATTAAGATGCTGAAAGCTTTGCATAAGCTATAGAATTATAATTTATAGTTTGACAATGGAGATACTATTATGGGGTTCTAAGGCCTAGTAAAATAATACAAAGGATTTGTCTAGGATAGTTCAAAAACATTTACCCCCTAAACATACTATTTTCTGTTTGATGTCTAGACCAATAATATTATCATGCTTGTCTCTTGATTCTCATTTATTTATGCACTCTTTATAACTCTCCTTTGTGCTTAGCATTTGGAACTGGAAAACATAATTTGGCTAAAACATGGCCTGTTGTTTCAACAAGAATTTGTAATCTTCTCAATTTTGAATATGTTTTGCTGTTACCCTGTTGATGATCTTAGAATCGAGGCTTCAGTATGATTCTCTGTCACTAATTAACGAACATTTTGAATTAATAATTGGAAAAATAGTTAAAATCACCGAGACTTGAAGCCCATATCATATAAAGTTTATATTTTGTCCTCTCAAGATTTACATAAAATATTGACATCGATTTTAATGATAAACCTAGAAGTTTTGACTCAACATAAATTAAAGAGATAGATACAGGTCAAAGCTTCCCATTCTTGTGGAACATCTTTAAAAATTTGAAAAGAATGCATTGGCTTCCTCTCACTGGATTGATAAATGATATCTATTTGTTTTACAGGATCATCTGGCATTGATGATGGAACTTCTTGGAAAGATGCCTAGCAAGGTAGGAAAGTTATCTGCTCTGGTGGAAATTGTGAAGTTACATGTCATTGATTTTACATGTTTTCATTTTCAATAAACACTATTCATTTTTATTTTATTTTTTTATAATTGTGTACTCAATTTGTCTCTTAATGAGTTTTTTTTTTTTTTTTTTTTTTTCCGCTTAAAGAAAACAAAACAATAGGGTATAAAATACTGCATTTCATTCTGAAAATTGGATGTCAACTGCAAAATTTAATCAAATATTTCCTGCAGATTGCACTTGGTGGCCGCTATTCCCGAGATTTTTTCAATAGACATGGTGACTTGAGGCACATCCGTGAGTTGCGATTCTGGCCGAAAAAAAAGATTCTGATGGAGAAGTATAGTTTCAGTGAACAAGATGCAAATGACATGGCTGACTTCCTTCTTCCAATACTTGATTTTGACCCTGAAAAGAGGCCAACAGCTGCTCAGTGCCTTACCCATCCATGGATAAGTGCAGGTCCTCGAACTCTTGAGCCCTCACTGACTAGTACACAACCTGATGCAATCAATGAGCATTCATTTGAAAAGAGAAGGAAGGACAAGGAAAAGGCCGAGCAGGAGTTGGTGGAAGTTGGTGTGAGGAATATATCTATTAATGGATCTCCTATGTCACTCAAAAACTCCCGACCCGTAAAGTCATCAACATAG
Protein sequence

>MS.gene007767.t1

MERKGINNDYSSEDEGTEHYRRGGYHAVKLGDAFNNGCYVVQSKLGWGHFSTVWLAWDTLKSRYVALKIQKSAQHYTEAAMDEIKILKQIEEGDPDDKKCVVKLLDHFKHSGPNGVHVCMVFEFLGDNLLTLIKYSDYRGVPLSMVKEICFHVLVGLDYLHRELSVIHTDLKPENVLLHSLIDPSKDPRKSGAPLILPNTKNEAVSNNDIIQNSKIGNGDPTKKQEKKMKEKGKRVAQGCVETESPEESGEDCKEPEQDNCNNVKSGVESVENKPNSSSSKGESTQTIEKDLAPGNDSHKKSSRSMRKKLLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADMWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGKMPSKIALGGRYSRDFFNRHGDLRHIRELRFWPKKKILMEKYSFSEQDANDMADFLLPILDFDPEKRPTAAQCLTHPWISAGPRTLEPSLTSTQPDAINEHSFEKRRKDKEKAEQELVEVGVRNISINGSPMSLKNSRPVKSST