AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene03728

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03728.t1 MTR_4g056390 97.606 543 13 0 1 543 1 543 0.0 1109
MS.gene03728.t1 MTR_2g084555 77.095 537 114 4 8 542 9 538 0.0 816
MS.gene03728.t1 MTR_1g061690 67.736 530 165 2 7 536 12 535 0.0 761
MS.gene03728.t1 MTR_5g024270 50.540 463 164 5 18 479 17 415 6.17e-164 473
MS.gene03728.t1 MTR_8g073250 47.835 508 176 7 20 526 19 438 8.96e-162 468
MS.gene03728.t1 MTR_5g024270 49.487 390 132 5 18 406 17 342 5.01e-128 379
MS.gene03728.t1 MTR_3g076540 36.943 157 92 4 24 180 80 229 5.70e-24 104
MS.gene03728.t1 MTR_3g076540 30.769 169 100 3 319 478 259 419 1.30e-17 85.9
MS.gene03728.t1 MTR_3g076540 36.943 157 92 4 24 180 80 229 7.09e-24 104
MS.gene03728.t1 MTR_3g076540 29.379 177 100 4 319 478 259 427 4.13e-15 78.2
MS.gene03728.t1 MTR_3g109390 35.227 176 105 5 5 180 43 209 4.03e-23 100
MS.gene03728.t1 MTR_3g109390 40.196 102 53 2 319 420 238 331 1.22e-17 84.7
MS.gene03728.t1 MTR_4g104620 36.306 157 93 4 24 180 84 233 4.08e-23 102
MS.gene03728.t1 MTR_4g104620 29.586 169 102 3 319 478 263 423 8.89e-16 80.1
MS.gene03728.t1 MTR_3g109390 35.227 176 105 5 5 180 43 209 4.70e-23 102
MS.gene03728.t1 MTR_3g109390 31.609 174 92 3 319 478 238 398 2.12e-22 99.8
MS.gene03728.t1 MTR_3g109390 35.227 176 105 5 5 180 43 209 5.00e-23 101
MS.gene03728.t1 MTR_3g109390 32.184 174 89 4 319 478 238 396 8.12e-22 98.2
MS.gene03728.t1 MTR_3g109390 35.227 176 105 5 5 180 21 187 7.42e-23 100
MS.gene03728.t1 MTR_3g109390 31.609 174 92 3 319 478 216 376 1.55e-22 100
MS.gene03728.t1 MTR_3g076540 37.500 152 88 4 29 180 3 147 8.26e-23 100
MS.gene03728.t1 MTR_3g076540 30.769 169 100 3 319 478 177 337 5.93e-18 85.9
MS.gene03728.t1 MTR_3g109390 31.609 174 92 3 319 478 225 385 1.91e-22 99.8
MS.gene03728.t1 MTR_3g109390 34.868 152 93 3 29 180 51 196 2.35e-20 93.6
MS.gene03728.t1 MTR_4g104620 38.571 140 80 3 41 180 6 139 3.36e-22 98.2
MS.gene03728.t1 MTR_4g104620 29.586 169 102 3 319 478 169 329 3.84e-16 80.1
MS.gene03728.t1 MTR_3g109390 31.609 174 92 3 319 478 247 407 3.98e-22 99.4
MS.gene03728.t1 MTR_3g109390 34.868 152 93 3 29 180 73 218 3.56e-20 93.2
MS.gene03728.t1 MTR_8g070930 37.589 141 82 3 39 178 139 274 1.55e-21 99.4
MS.gene03728.t1 MTR_8g070930 31.280 211 96 5 317 484 283 487 1.74e-17 86.7
MS.gene03728.t1 MTR_3g086530 31.765 170 106 5 14 180 66 228 2.28e-21 95.5
MS.gene03728.t1 MTR_3g086530 31.765 170 106 5 14 180 66 228 4.63e-21 95.5
MS.gene03728.t1 MTR_3g086530 31.405 121 70 2 319 439 260 367 2.52e-14 75.1
MS.gene03728.t1 MTR_3g076540 37.500 136 79 3 45 180 1 130 8.02e-21 94.0
MS.gene03728.t1 MTR_3g076540 30.769 169 100 3 319 478 160 320 5.90e-18 85.5
MS.gene03728.t1 MTR_3g086530 31.765 170 106 5 14 180 66 228 9.22e-21 95.1
MS.gene03728.t1 MTR_3g086530 26.554 177 101 4 319 480 260 422 2.14e-15 79.0
MS.gene03728.t1 MTR_4g104620 38.235 136 78 3 45 180 1 130 9.58e-21 94.0
MS.gene03728.t1 MTR_4g104620 29.586 169 102 3 319 478 160 320 4.35e-16 80.1
MS.gene03728.t1 MTR_6g074905 31.548 168 101 4 317 479 1007 1165 3.80e-20 95.1
MS.gene03728.t1 MTR_5g082700 31.638 177 103 6 317 485 546 712 7.44e-20 94.0
MS.gene03728.t1 MTR_5g082700 37.162 148 84 3 37 180 401 543 6.04e-16 81.6
MS.gene03728.t1 MTR_0349s0030 30.928 194 109 5 291 479 112 285 9.42e-20 90.1
MS.gene03728.t1 MTR_1g111180 36.264 182 94 7 319 485 822 996 7.84e-18 87.8
MS.gene03728.t1 MTR_1g111180 32.065 184 103 7 1 178 647 814 5.17e-17 85.1
MS.gene03728.t1 MTR_1g111180 36.264 182 94 7 319 485 823 997 7.84e-18 87.8
MS.gene03728.t1 MTR_1g111180 32.065 184 103 7 1 178 648 815 5.09e-17 85.1
MS.gene03728.t1 MTR_3g086530 26.404 178 102 4 318 480 87 250 3.66e-16 79.0
MS.gene03728.t1 MTR_5g082700 37.162 148 84 3 37 180 401 543 4.42e-16 81.6
MS.gene03728.t1 MTR_3g086530 35.345 116 69 3 65 180 2 111 6.75e-16 79.0
MS.gene03728.t1 MTR_3g086530 26.554 177 101 4 319 480 143 305 8.05e-16 79.0
MS.gene03728.t1 MTR_5g082700 37.162 148 84 3 37 180 401 543 7.01e-16 81.3
MS.gene03728.t1 MTR_5g082700 33.621 116 69 3 317 430 546 655 6.49e-13 72.0
MS.gene03728.t1 MTR_4g087620 32.020 203 102 10 282 480 172 342 5.15e-14 74.3
MS.gene03728.t1 MTR_8g080190 30.583 206 125 6 317 518 522 713 8.21e-13 71.6
MS.gene03728.t1 MTR_8g098845 31.220 205 102 9 282 480 169 340 8.52e-13 70.5
MS.gene03728.t1 MTR_3g085650 31.088 193 115 6 317 505 553 731 1.19e-12 71.2
MS.gene03728.t1 MTR_3g085650 31.088 193 115 6 317 505 553 731 1.27e-12 71.2
MS.gene03728.t1 MTR_3g085650 31.088 193 115 6 317 505 553 731 1.34e-12 70.9
MS.gene03728.t1 MTR_2g021330 32.727 220 116 12 308 517 155 352 1.56e-12 70.5
MS.gene03728.t1 MTR_4g061320 31.188 202 106 8 282 480 157 328 1.72e-12 69.3
MS.gene03728.t1 MTR_4g117490 32.877 219 117 11 308 517 155 352 1.76e-12 70.5
MS.gene03728.t1 MTR_8g028720 30.693 202 105 8 282 479 154 324 2.63e-12 68.9
MS.gene03728.t1 MTR_2g021330 32.727 220 116 12 308 517 155 352 2.66e-12 69.3
MS.gene03728.t1 MTR_8g106960 30.594 219 122 10 308 517 248 445 5.26e-12 68.9
MS.gene03728.t1 MTR_8g106960 30.594 219 122 10 308 517 248 445 5.89e-12 68.6
MS.gene03728.t1 MTR_3g089510 31.858 226 121 9 308 524 155 356 6.54e-12 68.6
MS.gene03728.t1 MTR_4g117490 32.877 219 117 11 308 517 155 352 6.63e-12 68.2
MS.gene03728.t1 MTR_3g089510 31.858 226 121 9 308 524 143 344 7.16e-12 68.6
MS.gene03728.t1 MTR_6g074870 31.683 101 63 1 319 419 240 334 1.60e-11 66.2
MS.gene03728.t1 MTR_6g074750 42.857 56 32 0 319 374 58 113 4.68e-11 60.5
MS.gene03728.t1 MTR_5g010030 29.703 202 109 8 282 480 158 329 5.12e-11 65.1
MS.gene03728.t1 MTR_2g072840 31.925 213 114 9 308 510 155 346 5.25e-11 65.9
MS.gene03728.t1 MTR_7g078690 29.353 201 109 8 282 479 155 325 5.28e-11 65.1
MS.gene03728.t1 MTR_2g072840 30.660 212 118 8 308 510 65 256 6.04e-11 65.5
MS.gene03728.t1 MTR_2g072840 31.925 213 114 9 308 510 155 346 6.68e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03728.t1 AT3G53030 66.729 538 140 7 1 527 1 510 0.0 714
MS.gene03728.t1 AT3G44850 68.762 525 154 4 8 529 14 531 0.0 709
MS.gene03728.t1 AT5G22840 64.326 527 163 4 8 529 14 520 0.0 701
MS.gene03728.t1 AT4G35500 50.000 482 164 6 20 498 19 426 1.55e-165 477
MS.gene03728.t1 AT4G35500 48.033 483 173 7 20 498 19 427 7.78e-156 452
MS.gene03728.t1 AT2G17530 59.487 195 77 1 20 212 19 213 5.35e-79 252
MS.gene03728.t1 AT2G17530 64.286 98 35 0 308 405 245 342 3.48e-38 144
MS.gene03728.t1 AT2G17530 59.487 195 77 1 20 212 19 213 1.43e-77 251
MS.gene03728.t1 AT2G17530 61.047 172 67 0 308 479 245 416 1.11e-74 244
MS.gene03728.t1 AT2G17530 59.487 195 77 1 20 212 19 213 1.43e-77 251
MS.gene03728.t1 AT2G17530 61.047 172 67 0 308 479 245 416 1.11e-74 244
MS.gene03728.t1 AT4G24740 37.209 172 100 5 24 195 84 247 2.02e-25 107
MS.gene03728.t1 AT4G24740 37.209 172 100 5 24 195 84 247 3.54e-25 107
MS.gene03728.t1 AT4G24740 40.230 87 46 1 319 405 263 343 1.31e-14 75.9
MS.gene03728.t1 AT4G24740 37.209 172 100 5 24 195 46 209 5.30e-25 107
MS.gene03728.t1 AT4G24740 30.636 173 97 5 319 479 225 386 2.58e-18 87.4
MS.gene03728.t1 AT4G24740 37.209 172 100 5 24 195 84 247 7.26e-25 107
MS.gene03728.t1 AT4G24740 30.636 173 97 5 319 479 263 424 3.31e-18 87.4
MS.gene03728.t1 AT4G32660 37.107 159 93 4 22 180 55 206 5.49e-24 103
MS.gene03728.t1 AT4G32660 40.594 101 53 3 319 418 235 329 7.73e-15 76.6
MS.gene03728.t1 AT4G32660 37.107 159 93 4 22 180 47 198 6.84e-24 104
MS.gene03728.t1 AT4G32660 33.140 172 97 5 319 480 227 390 7.17e-19 89.4
MS.gene03728.t1 AT4G32660 37.107 159 93 4 22 180 55 206 7.52e-24 104
MS.gene03728.t1 AT4G32660 33.140 172 97 5 319 480 235 398 7.48e-19 89.4
MS.gene03728.t1 AT5G35980 37.584 149 87 3 39 186 87 230 3.57e-23 104
MS.gene03728.t1 AT5G35980 29.762 252 118 7 317 521 230 469 1.65e-18 90.1
MS.gene03728.t1 AT5G35980 37.584 149 87 3 39 186 122 265 3.60e-23 104
MS.gene03728.t1 AT5G35980 32.558 215 89 6 317 484 265 470 1.36e-18 90.1
MS.gene03728.t1 AT5G35980 37.584 149 87 3 39 186 122 265 5.72e-23 103
MS.gene03728.t1 AT5G35980 29.762 252 118 7 317 521 265 504 1.24e-18 90.1
MS.gene03728.t1 AT4G24740 37.748 151 87 4 45 195 1 144 8.93e-23 97.8
MS.gene03728.t1 AT4G24740 40.230 87 46 1 319 405 160 240 4.93e-15 75.5
MS.gene03728.t1 AT4G24740 37.748 151 87 4 45 195 1 144 2.30e-22 98.6
MS.gene03728.t1 AT4G24740 30.636 173 97 5 319 479 160 321 1.22e-18 87.4
MS.gene03728.t1 AT4G24740 37.748 151 87 4 45 195 1 144 2.30e-22 98.6
MS.gene03728.t1 AT4G24740 30.636 173 97 5 319 479 160 321 1.22e-18 87.4
MS.gene03728.t1 AT4G24740 37.748 151 87 4 45 195 1 144 2.30e-22 98.6
MS.gene03728.t1 AT4G24740 30.636 173 97 5 319 479 160 321 1.22e-18 87.4
MS.gene03728.t1 AT1G73460 32.738 168 99 4 317 479 1003 1161 3.52e-22 101
MS.gene03728.t1 AT1G73460 35.135 148 87 4 37 180 856 998 6.51e-14 75.5
MS.gene03728.t1 AT1G73460 32.738 168 99 4 317 479 1003 1161 3.52e-22 101
MS.gene03728.t1 AT1G73460 35.135 148 87 4 37 180 856 998 6.51e-14 75.5
MS.gene03728.t1 AT1G73450 32.738 168 99 4 317 479 986 1144 3.56e-22 101
MS.gene03728.t1 AT1G73450 35.135 148 87 4 37 180 839 981 5.69e-14 75.5
MS.gene03728.t1 AT3G53570 35.669 157 94 4 24 180 101 250 1.93e-21 97.8
MS.gene03728.t1 AT3G53570 30.857 175 97 5 318 479 281 444 1.84e-19 91.7
MS.gene03728.t1 AT3G53570 35.669 157 94 4 24 180 101 250 1.93e-21 97.8
MS.gene03728.t1 AT3G53570 30.857 175 97 5 318 479 281 444 1.84e-19 91.7
MS.gene03728.t1 AT3G53570 35.669 157 94 4 24 180 101 250 1.93e-21 97.8
MS.gene03728.t1 AT3G53570 30.857 175 97 5 318 479 281 444 1.84e-19 91.7
MS.gene03728.t1 AT3G53570 35.669 157 94 4 24 180 87 236 2.03e-21 97.4
MS.gene03728.t1 AT3G53570 30.857 175 97 5 318 479 267 430 2.03e-19 91.7
MS.gene03728.t1 AT3G53570 35.669 157 94 4 24 180 87 236 2.03e-21 97.4
MS.gene03728.t1 AT3G53570 30.857 175 97 5 318 479 267 430 2.03e-19 91.7
MS.gene03728.t1 AT2G40120 32.934 167 102 4 318 481 407 566 2.45e-21 98.2
MS.gene03728.t1 AT2G40120 35.135 148 87 3 37 180 259 401 2.20e-14 76.3
MS.gene03728.t1 AT3G17750 31.548 168 101 4 317 479 972 1130 3.48e-20 95.5
MS.gene03728.t1 AT3G17750 35.135 148 87 4 37 180 825 967 1.29e-13 74.7
MS.gene03728.t1 AT4G24740 30.636 173 97 5 319 479 57 218 1.52e-19 88.2
MS.gene03728.t1 AT4G24740 30.636 173 97 5 319 479 57 218 1.52e-19 88.2
MS.gene03728.t1 AT4G32660 32.948 173 98 5 319 481 123 287 2.83e-19 89.0
MS.gene03728.t1 AT4G32660 37.000 100 57 3 81 180 1 94 9.81e-13 69.3
MS.gene03728.t1 AT3G25840 33.871 186 86 8 318 480 763 934 1.79e-17 86.7
MS.gene03728.t1 AT3G25840 32.716 162 96 6 24 179 603 757 2.02e-14 77.0
MS.gene03728.t1 AT3G25840 34.054 185 85 8 319 480 502 672 2.21e-17 86.3
MS.gene03728.t1 AT3G25840 31.677 161 99 5 24 179 341 495 5.32e-14 75.5
MS.gene03728.t1 AT3G53640 31.844 179 98 6 319 480 470 641 9.82e-17 84.0
MS.gene03728.t1 AT3G53640 30.220 182 107 6 3 179 297 463 9.96e-14 74.3
MS.gene03728.t1 AT1G13350 33.540 161 96 5 24 179 428 582 1.68e-16 83.6
MS.gene03728.t1 AT1G13350 30.899 178 101 5 319 480 589 760 3.94e-16 82.4
MS.gene03728.t1 AT1G13350 33.540 161 96 5 24 179 455 609 2.13e-16 83.2
MS.gene03728.t1 AT1G13350 30.899 178 101 5 319 480 616 787 4.36e-16 82.0
MS.gene03728.t1 AT1G13350 33.540 161 96 5 24 179 501 655 3.51e-16 82.4
MS.gene03728.t1 AT1G13350 30.899 178 101 5 319 480 662 833 5.57e-16 82.0
MS.gene03728.t1 AT3G59790 29.060 234 121 10 282 506 177 374 2.29e-13 72.4
MS.gene03728.t1 AT3G14720 31.132 212 117 8 308 510 155 346 6.14e-13 72.0
MS.gene03728.t1 AT3G14720 31.604 212 116 8 308 510 155 346 1.52e-12 70.1
MS.gene03728.t1 AT3G14720 31.604 212 116 8 308 510 155 346 1.52e-12 70.1
MS.gene03728.t1 AT1G01560 29.851 201 108 9 282 479 157 327 2.17e-12 69.3
MS.gene03728.t1 AT3G45640 30.693 202 105 9 282 479 155 325 4.14e-12 68.6
MS.gene03728.t1 AT4G01370 30.348 201 107 9 282 479 160 330 7.01e-12 67.8
MS.gene03728.t1 AT2G01450 31.797 217 117 11 308 514 146 341 7.09e-12 68.2
MS.gene03728.t1 AT2G01450 31.797 217 117 11 308 514 146 341 7.09e-12 68.2
MS.gene03728.t1 AT2G01450 31.797 217 117 11 308 514 146 341 7.09e-12 68.2
MS.gene03728.t1 AT2G01450 31.797 217 117 11 308 514 146 341 7.09e-12 68.2
MS.gene03728.t1 AT2G43790 30.542 203 105 9 282 480 180 350 2.31e-11 66.2
MS.gene03728.t1 AT3G18040 30.594 219 122 10 308 517 65 262 4.32e-11 65.5
MS.gene03728.t1 AT3G18040 30.909 220 120 11 308 517 262 459 5.24e-11 65.9
MS.gene03728.t1 AT3G18040 30.909 220 120 11 308 517 153 350 5.28e-11 65.5
MS.gene03728.t1 AT1G76540 28.655 171 98 5 316 482 158 308 5.34e-11 64.3
MS.gene03728.t1 AT3G18040 30.909 220 120 11 308 517 148 345 5.41e-11 65.5
MS.gene03728.t1 AT2G46070 29.851 201 108 9 282 479 158 328 6.55e-11 64.7
MS.gene03728.t1 AT2G46070 29.851 201 108 9 282 479 192 362 7.26e-11 64.7
MS.gene03728.t1 AT3G18040 30.594 219 122 10 308 517 262 459 7.72e-11 65.5

Find 124 sgRNAs with CRISPR-Local

Find 362 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAATCCAAAACAGTAAAAT+TGG 0.192415 4.3:+44479409 MS.gene03728:CDS
TTGGATCACTTCAAGCATTC+AGG 0.225873 4.3:+44479094 MS.gene03728:CDS
AACTTTACTCGAAGAGCTAT+TGG 0.245290 4.3:-44479605 None:intergenic
CATCTATGTTGATGACTTTA+CGG 0.264587 4.3:-44481905 None:intergenic
AAGTGCAAGCTGGTTGATTT+TGG 0.274103 4.3:+44479730 MS.gene03728:CDS
TTTCTACTGTTTGGCTTGCT+TGG 0.286757 4.3:+44477486 MS.gene03728:CDS
TTCTACTGTTTGGCTTGCTT+GGG 0.313798 4.3:+44477487 MS.gene03728:CDS
TTCTTATGACCATCGTTTCC+TGG 0.324044 4.3:-44479661 None:intergenic
AGGTGTCCTGAGGTTCTTCT+TGG 0.337399 4.3:+44479808 MS.gene03728:CDS
AAGGAAAGTCCAGAGGAATC+TGG 0.359071 4.3:+44479508 MS.gene03728:CDS
GTGAGGAATATATCTATTAA+TGG 0.359774 4.3:+44481853 MS.gene03728:CDS
ACATCCATGAGTTGCGATTC+TGG 0.361691 4.3:+44481563 MS.gene03728:CDS
AAAATGTGTTGTGAAGCTTT+TGG 0.362109 4.3:+44479075 MS.gene03728:CDS
TGTTCAATCTAAGCTTGGTT+GGG 0.363107 4.3:+44477457 MS.gene03728:CDS
ATCTATGTTGATGACTTTAC+GGG 0.386093 4.3:-44481904 None:intergenic
GATTTCCTTGGATCCTTTGA+CGG 0.395707 4.3:-44479331 None:intergenic
ACTTTACTCGAAGAGCTATT+GGG 0.402890 4.3:-44479604 None:intergenic
GCATTGATGATGGAACTTCT+TGG 0.403191 4.3:+44481216 MS.gene03728:CDS
TGGATCACTTCAAGCATTCA+GGG 0.408279 4.3:+44479095 MS.gene03728:CDS
ATATTCAAACAAGGCAATAT+AGG 0.414165 4.3:+44479788 MS.gene03728:CDS
ACAGTGGTGACAACTATGAT+AGG 0.429417 4.3:+44479917 MS.gene03728:CDS
GATAGTCACTATATTTGATA+AGG 0.433753 4.3:-44479174 None:intergenic
GGACAAGGAAAAGGCCGAGC+AGG 0.434320 4.3:+44481813 MS.gene03728:CDS
ATCTGCTTTGAGCTTGCCAC+TGG 0.441460 4.3:+44479874 MS.gene03728:CDS
TTGGTGTTTGGAAGGATAAG+TGG 0.442157 4.3:-44479361 None:intergenic
TTCAAGCATTCAGGGCCTAA+TGG 0.442522 4.3:+44479103 MS.gene03728:CDS
TTCTTCTCCTGGTTCTTCGT+CGG 0.444681 4.3:-44479442 None:intergenic
TTGTTACAATTATCCTGCTC+AGG 0.444711 4.3:-44479547 None:intergenic
AGGAAAGTCCAGAGGAATCT+GGG 0.452844 4.3:+44479509 MS.gene03728:CDS
TCAAAGGATCCAAGGAAATC+AGG 0.454737 4.3:+44479334 MS.gene03728:CDS
TTGAAGTGAATGGAGAGAAA+AGG 0.457401 4.3:+44477329 None:intergenic
AAATGAAGGGAAAGGGTAAG+AGG 0.459156 4.3:+44479464 MS.gene03728:CDS
TAATCCAAAACAGTAAAATT+GGG 0.461577 4.3:+44479410 MS.gene03728:CDS
GAATGCTCATTGATTGCATC+AGG 0.462979 4.3:-44481772 None:intergenic
TAATGGCGTGCATGTGTGTA+TGG 0.464665 4.3:+44479120 MS.gene03728:CDS
GTTCAATCTAAGCTTGGTTG+GGG 0.469698 4.3:+44477458 MS.gene03728:CDS
CAATCATCCCCAGATTCCTC+TGG 0.469706 4.3:-44479517 None:intergenic
GAATGAAGTAACACATTCTC+AGG 0.471207 4.3:-44479298 None:intergenic
TGCCAGCAGCTTCTTTCTCA+TGG 0.472338 4.3:-44479695 None:intergenic
GATAACTTTCCTACCTTGCT+AGG 0.473221 4.3:-44481246 None:intergenic
TGTTGATGACTTTACGGGTC+GGG 0.473456 4.3:-44481899 None:intergenic
TCAGGGTCAAAATCAAGTAT+TGG 0.476440 4.3:-44481661 None:intergenic
TATGTTGTTCAATCTAAGCT+TGG 0.476981 4.3:+44477452 MS.gene03728:CDS
AGTGGAGCACCTGATTTCCT+TGG 0.486223 4.3:-44479343 None:intergenic
ATAGTCACTATATTTGATAA+GGG 0.487347 4.3:-44479173 None:intergenic
TTCCTGCAGATTGCACTTGG+TGG 0.488149 4.3:+44481496 MS.gene03728:intron
TTGTTCAATCTAAGCTTGGT+TGG 0.493944 4.3:+44477456 MS.gene03728:CDS
AATGAAGGGAAAGGGTAAGA+GGG 0.494221 4.3:+44479465 MS.gene03728:CDS
GGATCATCTGGCATTGATGA+TGG 0.496553 4.3:+44481206 MS.gene03728:intron
GAACCAGGAGAAGAAAATGA+AGG 0.498186 4.3:+44479450 MS.gene03728:CDS
GCAAAGGACCACATATCTGC+TGG 0.503873 4.3:-44479847 None:intergenic
ATGAAGGTACTGAACACTAT+AGG 0.505840 4.3:+44477378 MS.gene03728:CDS
TGGAGATCCGACGAAGAACC+AGG 0.506120 4.3:+44479435 MS.gene03728:CDS
GAGAAGGAAGGACAAGGAAA+AGG 0.507421 4.3:+44481804 MS.gene03728:CDS
CTCAGTGCCTTACCCATCCA+TGG 0.510371 4.3:+44481701 MS.gene03728:CDS
TCGGCCAGAATCGCAACTCA+TGG 0.510515 4.3:-44481567 None:intergenic
AGCATTCATTTGAAAAGAGA+AGG 0.511517 4.3:+44481788 MS.gene03728:CDS
CAAAACAGTAAAATTGGGAA+TGG 0.514220 4.3:+44479415 MS.gene03728:CDS
TATTTCCTGCAGATTGCACT+TGG 0.517054 4.3:+44481493 MS.gene03728:intron
CAAAATCAAGTATTGGAAGA+AGG 0.523920 4.3:-44481654 None:intergenic
AAAGGCCGAGCAGGAGTTGG+TGG 0.524206 4.3:+44481822 MS.gene03728:CDS
ATCAACACAGACCACTGAAA+AGG 0.529361 4.3:+44479630 MS.gene03728:CDS
ACTGAAAAGGACCTTGCACC+AGG 0.530605 4.3:+44479643 MS.gene03728:CDS
GGCTCAAGGCTGTGTTGAGA+AGG 0.533237 4.3:+44479489 MS.gene03728:CDS
GAGCAGGAGTTGGTGGAAGT+TGG 0.533978 4.3:+44481829 MS.gene03728:CDS
CACTTATCCATGGATGGGTA+AGG 0.534938 4.3:-44481708 None:intergenic
TGCTTGGGATACTCTCAAAT+CGG 0.534960 4.3:+44477502 MS.gene03728:CDS
GACCATCGTTTCCTGGTGCA+AGG 0.537763 4.3:-44479654 None:intergenic
GGAAAAGGCCGAGCAGGAGT+TGG 0.538465 4.3:+44481819 MS.gene03728:CDS
GACCTGCACTTATCCATGGA+TGG 0.540258 4.3:-44481714 None:intergenic
TGATTGTAAAGAACCTGAGC+AGG 0.542237 4.3:+44479534 MS.gene03728:CDS
ACCCATCCATGGATAAGTGC+AGG 0.542820 4.3:+44481712 MS.gene03728:CDS
TTCACTGATTGATCCGTCAA+AGG 0.543734 4.3:+44479318 MS.gene03728:CDS
ATACACACATGCACGCCATT+AGG 0.544060 4.3:-44479118 None:intergenic
AAAACATATCTCTTTAACCA+TGG 0.544485 4.3:-44479212 None:intergenic
ACACTACACTGAAGCTGCAA+TGG 0.544944 4.3:+44479003 MS.gene03728:CDS
GAGAAGAAAATGAAGGGAAA+GGG 0.549231 4.3:+44479457 MS.gene03728:CDS
CTTGGTGATGCTTTCAACAA+TGG 0.554279 4.3:+44477425 MS.gene03728:CDS
AACCAGGAGAAGAAAATGAA+GGG 0.561030 4.3:+44479451 MS.gene03728:CDS
TTCATTTGAAAAGAGAAGGA+AGG 0.562994 4.3:+44481792 MS.gene03728:CDS
GCAGCTTCTTTCTCATGGAA+CGG 0.565762 4.3:-44479690 None:intergenic
CGAGGACCTGCACTTATCCA+TGG 0.565971 4.3:-44481718 None:intergenic
GGAGAAGAAAATGAAGGGAA+AGG 0.568087 4.3:+44479456 MS.gene03728:CDS
TTAGAACCAAGAAGAACCTC+AGG 0.569982 4.3:-44479814 None:intergenic
GGGTACCATGCTGTGAAACT+TGG 0.570597 4.3:+44477407 MS.gene03728:CDS
TTCCATGAGAAAGAAGCTGC+TGG 0.571340 4.3:+44479693 MS.gene03728:CDS
ACCTGCACTTATCCATGGAT+GGG 0.571534 4.3:-44481713 None:intergenic
ACTCAACTCCAGCAGATATG+TGG 0.578886 4.3:+44479839 MS.gene03728:CDS
TGTTGATCTTAAGTGCAAGC+TGG 0.579496 4.3:+44479720 MS.gene03728:CDS
AAGGGTAAGAGGGTGGCTCA+AGG 0.581871 4.3:+44479475 MS.gene03728:CDS
AGTGAGGGCTCAAGAGTTCG+AGG 0.586270 4.3:-44481736 None:intergenic
ATTCTCAAACAAATTGAAGA+GGG 0.586563 4.3:+44479037 MS.gene03728:CDS
TCGTGGAGTTCCTCTCTCCA+TGG 0.586905 4.3:+44479195 MS.gene03728:CDS
TCAATAGACATGGTGACTTG+AGG 0.591641 4.3:+44481539 MS.gene03728:CDS
CTGAACACTATAGGCGTGGT+GGG 0.591727 4.3:+44477387 MS.gene03728:CDS
CAGTGGTGACAACTATGATA+GGG 0.596335 4.3:+44479918 MS.gene03728:CDS
CTCAAAGCAGATGCAAGCAA+AGG 0.596681 4.3:-44479863 None:intergenic
GATTCTCAAACAAATTGAAG+AGG 0.602574 4.3:+44479036 MS.gene03728:CDS
GATTACAGTTCAGAAGATGA+AGG 0.613227 4.3:+44477362 MS.gene03728:CDS
TTGATCCGTCAAAGGATCCA+AGG 0.613694 4.3:+44479326 MS.gene03728:CDS
GTAAGGCACTGAGCAGCTGT+TGG 0.614457 4.3:-44481691 None:intergenic
AACTTCCACCAACTCCTGCT+CGG 0.617085 4.3:-44481827 None:intergenic
TCTTGGAAAGATGCCTAGCA+AGG 0.623101 4.3:+44481233 MS.gene03728:CDS
GACCTTGCACCAGGAAACGA+TGG 0.630623 4.3:+44479652 MS.gene03728:CDS
ATCAAATATAGTGACTATCG+TGG 0.632403 4.3:+44479178 MS.gene03728:CDS
ATGTTGATGACTTTACGGGT+CGG 0.635713 4.3:-44481900 None:intergenic
TGACAACTATGATAGGGATG+AGG 0.636106 4.3:+44479924 MS.gene03728:CDS
ATCTCTTTAACCATGGAGAG+AGG 0.638691 4.3:-44479205 None:intergenic
TGAAAAGAGAAGGAAGGACA+AGG 0.644229 4.3:+44481798 MS.gene03728:CDS
GAAGGGAAAGGGTAAGAGGG+TGG 0.647195 4.3:+44479468 MS.gene03728:CDS
CATCACCAAGTTTCACAGCA+TGG 0.653174 4.3:-44477412 None:intergenic
GATTATGTCATTATTAGACA+CGG 0.653569 4.3:-44479392 None:intergenic
ACTGAACACTATAGGCGTGG+TGG 0.658178 4.3:+44477386 MS.gene03728:CDS
AGGTTGTGTACTAGTCAGTG+AGG 0.667251 4.3:-44481752 None:intergenic
GGTTGTGTACTAGTCAGTGA+GGG 0.667334 4.3:-44481751 None:intergenic
GGAAAGTCCAGAGGAATCTG+GGG 0.668122 4.3:+44479510 MS.gene03728:CDS
GGGTGAGAAGATTATCACCA+AGG 0.668408 4.3:-44479153 None:intergenic
GGTACTGAACACTATAGGCG+TGG 0.685157 4.3:+44477383 MS.gene03728:CDS
TCACAAATGATATTCAAACA+AGG 0.699139 4.3:+44479779 MS.gene03728:CDS
TGAACAAGATGCAAATGACA+TGG 0.700027 4.3:+44481624 MS.gene03728:CDS
AGTTGGTGGAAGTTGGTGTG+AGG 0.701503 4.3:+44481836 MS.gene03728:CDS
TGTTGAGAAGGAAAGTCCAG+AGG 0.713136 4.3:+44479501 MS.gene03728:CDS
TCATAGTTGTCACCACTGTG+AGG 0.714384 4.3:-44479913 None:intergenic
AAGGCAATATAGGTGTCCTG+AGG 0.731682 4.3:+44479798 MS.gene03728:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACAAAAAAAAAAAAAACT+AGG + chr4.3:44477979-44477998 MS.gene03728:intron 10.0%
!! AATATAAACTTTATATGATA+TGG - chr4.3:44480994-44481013 None:intergenic 10.0%
!! ATATAAACTTTATATGATAT+GGG - chr4.3:44480993-44481012 None:intergenic 10.0%
!! TAATGTCTTTAAATTAAAAA+AGG + chr4.3:44478306-44478325 MS.gene03728:intron 10.0%
!! TTAAAAAAAACAAAACAATA+GGG + chr4.3:44481413-44481432 MS.gene03728:intron 10.0%
!! AAAAAGTAATTTACTAAAGT+CGG - chr4.3:44480429-44480448 None:intergenic 15.0%
!! AACAAAAACAACAAAAAAAA+AGG - chr4.3:44477565-44477584 None:intergenic 15.0%
!! ATAATTTATAGTTTGACAAT+GGG + chr4.3:44480579-44480598 MS.gene03728:intron 15.0%
!! CTTAAAAAAAACAAAACAAT+AGG + chr4.3:44481412-44481431 MS.gene03728:intron 15.0%
!! TATAATTTATAGTTTGACAA+TGG + chr4.3:44480578-44480597 MS.gene03728:intron 15.0%
!! TTCAAAATGCAAAATATATA+GGG + chr4.3:44477790-44477809 MS.gene03728:intron 15.0%
!!! AATTACTTTTTGAAAGAAAA+AGG + chr4.3:44480438-44480457 MS.gene03728:intron 15.0%
!!! GAAACTTTTAATTAAGTTAA+AGG + chr4.3:44480368-44480387 MS.gene03728:intron 15.0%
!!! GAACATTTTGAATTAATAAT+TGG + chr4.3:44480937-44480956 MS.gene03728:intron 15.0%
!!! TTTTTTGTTGTTTTTGTTTT+TGG + chr4.3:44477567-44477586 MS.gene03728:intron 15.0%
!! AAAATTTGAAAAGAATGCAT+TGG + chr4.3:44481140-44481159 MS.gene03728:intron 20.0%
!! AAACAATGAAGTTGTTAAAA+AGG - chr4.3:44477537-44477556 None:intergenic 20.0%
!! AAACAGAAAATAGTATGTTT+AGG - chr4.3:44480682-44480701 None:intergenic 20.0%
!! AACAGAAAATAGTATGTTTA+GGG - chr4.3:44480681-44480700 None:intergenic 20.0%
!! AATAACCAACCAAAAATTTA+AGG - chr4.3:44480105-44480124 None:intergenic 20.0%
!! AATAAGCAAAACAATTGTAA+AGG - chr4.3:44478703-44478722 None:intergenic 20.0%
!! ATAATCCAAAACAGTAAAAT+TGG + chr4.3:44479409-44479428 MS.gene03728:CDS 20.0%
!! ATAGTCACTATATTTGATAA+GGG - chr4.3:44479176-44479195 None:intergenic 20.0%
!! ATTGTAATAACCTTGAAAAT+AGG + chr4.3:44478004-44478023 MS.gene03728:intron 20.0%
!! GTTCAAAATGCAAAATATAT+AGG + chr4.3:44477789-44477808 MS.gene03728:intron 20.0%
!! TAAATTAAAGAGATAGATAC+AGG + chr4.3:44481085-44481104 MS.gene03728:intron 20.0%
!! TAATCCAAAACAGTAAAATT+GGG + chr4.3:44479410-44479429 MS.gene03728:CDS 20.0%
!! TCGTAATTTCATAATTACTA+CGG - chr4.3:44477644-44477663 None:intergenic 20.0%
!!! AAATATAAGAGTCTGTATTT+TGG + chr4.3:44478518-44478537 MS.gene03728:intron 20.0%
!!! ACACCTTTTTTAATGATTTT+GGG + chr4.3:44480311-44480330 MS.gene03728:intron 20.0%
!!! ATGATATCTATTTGTTTTAC+AGG + chr4.3:44481185-44481204 MS.gene03728:intron 20.0%
!!! GGTGTAAAAAGATTTTTTTA+GGG + chr4.3:44477766-44477785 MS.gene03728:intron 20.0%
!!! GTGTAAAAAGATTTTTTTAG+GGG + chr4.3:44477767-44477786 MS.gene03728:intron 20.0%
!!! TACACCTTTTTTAATGATTT+TGG + chr4.3:44480310-44480329 MS.gene03728:intron 20.0%
!!! TATTTTATGTAAATCTTGAG+AGG - chr4.3:44481021-44481040 None:intergenic 20.0%
!!! TGGTGTAAAAAGATTTTTTT+AGG + chr4.3:44477765-44477784 MS.gene03728:intron 20.0%
!!! TTTTTTTTTTTGTTTTCCGT+AGG - chr4.3:44477974-44477993 None:intergenic 20.0%
! AAAAAATATGCAACTGCATA+TGG - chr4.3:44478099-44478118 None:intergenic 25.0%
! AAAACATATCTCTTTAACCA+TGG - chr4.3:44479215-44479234 None:intergenic 25.0%
! AAAAGGTAAATGCTATACTT+TGG + chr4.3:44480455-44480474 MS.gene03728:intron 25.0%
! AAATATATGCAAAACTGTAC+CGG - chr4.3:44480397-44480416 None:intergenic 25.0%
! AAATCCAAAAATATCAGGTA+AGG - chr4.3:44478908-44478927 None:intergenic 25.0%
! AACATAATTTGGCTAAAACA+TGG + chr4.3:44480801-44480820 MS.gene03728:intron 25.0%
! AATAATTATATGCCAAGAGA+AGG + chr4.3:44480479-44480498 MS.gene03728:intron 25.0%
! AATCCAAAAATATCAGGTAA+GGG - chr4.3:44478907-44478926 None:intergenic 25.0%
! ACAGAAAATAGTATGTTTAG+GGG - chr4.3:44480680-44480699 None:intergenic 25.0%
! ATATTCAAACAAGGCAATAT+AGG + chr4.3:44479788-44479807 MS.gene03728:CDS 25.0%
! ATGTCTATTGAAAAAATCTC+GGG - chr4.3:44481530-44481549 None:intergenic 25.0%
! ATTCTCAAACAAATTGAAGA+GGG + chr4.3:44479037-44479056 MS.gene03728:CDS 25.0%
! ATTGACGTTCTTCAAATAAA+AGG - chr4.3:44478607-44478626 None:intergenic 25.0%
! CAATCAAAATTCAAAACCAA+TGG + chr4.3:44478623-44478642 MS.gene03728:intron 25.0%
! CATGTCTATTGAAAAAATCT+CGG - chr4.3:44481531-44481550 None:intergenic 25.0%
! CTTGAAAATAGGAAGTAAAA+TGG + chr4.3:44478015-44478034 MS.gene03728:intron 25.0%
! GACAAGCATGATAATATTAT+TGG - chr4.3:44480715-44480734 None:intergenic 25.0%
! GATAGTCACTATATTTGATA+AGG - chr4.3:44479177-44479196 None:intergenic 25.0%
! GATTATGTCATTATTAGACA+CGG - chr4.3:44479395-44479414 None:intergenic 25.0%
! GTAGAAATAGTAATCAATGT+GGG + chr4.3:44477677-44477696 MS.gene03728:intron 25.0%
! GTGAGGAATATATCTATTAA+TGG + chr4.3:44481853-44481872 MS.gene03728:CDS 25.0%
! TAAAGATATTCCACAAGAAT+GGG - chr4.3:44481120-44481139 None:intergenic 25.0%
! TAAATCCAAAGTGAAGATAA+AGG + chr4.3:44480337-44480356 MS.gene03728:intron 25.0%
! TCACAAATGATATTCAAACA+AGG + chr4.3:44479779-44479798 MS.gene03728:CDS 25.0%
! TGATACTAATGTGATATCAA+GGG - chr4.3:44478382-44478401 None:intergenic 25.0%
! TGTAGAAATAGTAATCAATG+TGG + chr4.3:44477676-44477695 MS.gene03728:intron 25.0%
! TTAAAGATATTCCACAAGAA+TGG - chr4.3:44481121-44481140 None:intergenic 25.0%
! TTAATTAAGTTAAAGGTTCC+CGG + chr4.3:44480375-44480394 MS.gene03728:intron 25.0%
! TTCAGAAATCCAAAAATATC+AGG - chr4.3:44478913-44478932 None:intergenic 25.0%
! TTGACGTTCTTCAAATAAAA+GGG - chr4.3:44478606-44478625 None:intergenic 25.0%
! TTGATACTAATGTGATATCA+AGG - chr4.3:44478383-44478402 None:intergenic 25.0%
!! ATATGTTTTCATGTTCTAGT+GGG + chr4.3:44479226-44479245 MS.gene03728:CDS 25.0%
!! ATCTAACATGGGATTATTTT+CGG + chr4.3:44477939-44477958 MS.gene03728:intron 25.0%
!! ATGATTGTAAAAGCATGAAA+AGG - chr4.3:44480146-44480165 None:intergenic 25.0%
!! ATTGACTGATGTTTGATTTA+AGG + chr4.3:44478743-44478762 MS.gene03728:intron 25.0%
!! CATTTTACTTCCTATTTTCA+AGG - chr4.3:44478017-44478036 None:intergenic 25.0%
!! CTCTTTTGTCCTTAAATTTT+TGG + chr4.3:44480093-44480112 MS.gene03728:intron 25.0%
!! GGTAATGTGTTCTATATTTT+TGG - chr4.3:44478069-44478088 None:intergenic 25.0%
!! GTGCTATTATTATTTGATGT+TGG + chr4.3:44479994-44480013 MS.gene03728:intron 25.0%
!! TTGACTGATGTTTGATTTAA+GGG + chr4.3:44478744-44478763 MS.gene03728:intron 25.0%
!!! AATTGCTATTTTGAAATTCG+AGG + chr4.3:44478771-44478790 MS.gene03728:intron 25.0%
!!! ATCCGTTGTATTATTTTACT+AGG - chr4.3:44480629-44480648 None:intergenic 25.0%
!!! ATGCAGTTGCATATTTTTTT+TGG + chr4.3:44478100-44478119 MS.gene03728:intron 25.0%
!!! ATTGCTATTTTGAAATTCGA+GGG + chr4.3:44478772-44478791 MS.gene03728:intron 25.0%
!!! ATTGCTTTTTAAAGTTTAGG+GGG + chr4.3:44477823-44477842 MS.gene03728:intron 25.0%
!!! CATTGCTTTTTAAAGTTTAG+GGG + chr4.3:44477822-44477841 MS.gene03728:intron 25.0%
!!! GCATTGCTTTTTAAAGTTTA+GGG + chr4.3:44477821-44477840 MS.gene03728:intron 25.0%
!!! GTTCAAACTTTTGAGTTATA+GGG + chr4.3:44477738-44477757 MS.gene03728:intron 25.0%
!!! TCCATCAGAATCTTTTTTTT+CGG - chr4.3:44481589-44481608 None:intergenic 25.0%
!!! TGCATTGCTTTTTAAAGTTT+AGG + chr4.3:44477820-44477839 MS.gene03728:intron 25.0%
!!! TTTGTCCTTAAATTTTTGGT+TGG + chr4.3:44480097-44480116 MS.gene03728:intron 25.0%
AAATAGTAATCAATGTGGGT+TGG + chr4.3:44477681-44477700 MS.gene03728:intron 30.0%
AATAGTAATCAATGTGGGTT+GGG + chr4.3:44477682-44477701 MS.gene03728:intron 30.0%
AATATATGCAAAACTGTACC+GGG - chr4.3:44480396-44480415 None:intergenic 30.0%
ACAATGGGAGATACTATTAT+GGG + chr4.3:44480594-44480613 MS.gene03728:intron 30.0%
AGCATTCATTTGAAAAGAGA+AGG + chr4.3:44481788-44481807 MS.gene03728:CDS 30.0%
ATCAAATATAGTGACTATCG+TGG + chr4.3:44479178-44479197 MS.gene03728:CDS 30.0%
CAAAACAGTAAAATTGGGAA+TGG + chr4.3:44479415-44479434 MS.gene03728:CDS 30.0%
CAAATTCTTGTTGAAACAAC+AGG - chr4.3:44480827-44480846 None:intergenic 30.0%
CAGAAAATAGTATGTTTAGG+GGG - chr4.3:44480679-44480698 None:intergenic 30.0%
GATTCTCAAACAAATTGAAG+AGG + chr4.3:44479036-44479055 MS.gene03728:CDS 30.0%
GGCCTAGTAAAATAATACAA+CGG + chr4.3:44480624-44480643 MS.gene03728:intron 30.0%
TAGTTTCTTAGTACGATACA+GGG - chr4.3:44479957-44479976 None:intergenic 30.0%
TATGTTGAGTCAAAACTTCT+AGG - chr4.3:44481067-44481086 None:intergenic 30.0%
TATGTTGTTCAATCTAAGCT+TGG + chr4.3:44477452-44477471 MS.gene03728:CDS 30.0%
TCTAGTCCTTCAAATTGTAA+GGG - chr4.3:44478812-44478831 None:intergenic 30.0%
TCTGAACTCTGTTAATGATT+TGG + chr4.3:44478927-44478946 MS.gene03728:intron 30.0%
TGGAACTGGAAAACATAATT+TGG + chr4.3:44480790-44480809 MS.gene03728:intron 30.0%
TTCATTTGAAAAGAGAAGGA+AGG + chr4.3:44481792-44481811 MS.gene03728:CDS 30.0%
TTCTAGTCCTTCAAATTGTA+AGG - chr4.3:44478813-44478832 None:intergenic 30.0%
TTTGGACTGAAAATCGTTAA+AGG - chr4.3:44480175-44480194 None:intergenic 30.0%
! AAAATGTGTTGTGAAGCTTT+TGG + chr4.3:44479075-44479094 MS.gene03728:CDS 30.0%
! ATAATACAACGGATTTGTCT+AGG + chr4.3:44480635-44480654 MS.gene03728:intron 30.0%
! CATTCCCAATTTTACTGTTT+TGG - chr4.3:44479417-44479436 None:intergenic 30.0%
! CTCAACTTTTACAAATTTCC+AGG - chr4.3:44478545-44478564 None:intergenic 30.0%
! CTGCATTTCATTCTGAAAAT+TGG + chr4.3:44481445-44481464 MS.gene03728:intron 30.0%
! GATATGTTTTCATGTTCTAG+TGG + chr4.3:44479225-44479244 MS.gene03728:CDS 30.0%
! TGTATGGTTTTTGAATTCCT+TGG + chr4.3:44479136-44479155 MS.gene03728:CDS 30.0%
! TTACCCTTACCTGATATTTT+TGG + chr4.3:44478901-44478920 MS.gene03728:intron 30.0%
!! ATTAGACACGGACTTATTTT+TGG - chr4.3:44479383-44479402 None:intergenic 30.0%
!! CAAAATCAAGTATTGGAAGA+AGG - chr4.3:44481657-44481676 None:intergenic 30.0%
!! GGCTTGTTGGTTAATAATAT+TGG + chr4.3:44478478-44478497 MS.gene03728:intron 30.0%
!! TTGCTGTTTCATATGTTTGA+GGG - chr4.3:44478577-44478596 None:intergenic 30.0%
!! TTTGCTGTTTCATATGTTTG+AGG - chr4.3:44478578-44478597 None:intergenic 30.0%
!! TTTTTGTTTGTAGCGTTATG+TGG + chr4.3:44478955-44478974 MS.gene03728:intron 30.0%
!!! ACAACACATTTTTTGTCATC+AGG - chr4.3:44479067-44479086 None:intergenic 30.0%
!!! ACTTATTTTTGGTGTTTGGA+AGG - chr4.3:44479372-44479391 None:intergenic 30.0%
!!! ATTTGTTTTACAGGATCATC+TGG + chr4.3:44481194-44481213 MS.gene03728:intron 30.0%
!!! CAACACATTTTTTGTCATCA+GGG - chr4.3:44479066-44479085 None:intergenic 30.0%
!!! CCTTTTTTAATGATTTTGGG+CGG + chr4.3:44480314-44480333 MS.gene03728:intron 30.0%
!!! CGAGATTTTTTCAATAGACA+TGG + chr4.3:44481529-44481548 MS.gene03728:CDS 30.0%
!!! GGTTCAAACTTTTGAGTTAT+AGG + chr4.3:44477737-44477756 MS.gene03728:intron 30.0%
!!! TTGATTTTGGTAATGCTTGT+TGG + chr4.3:44479743-44479762 MS.gene03728:CDS 30.0%
AACCAGGAGAAGAAAATGAA+GGG + chr4.3:44479451-44479470 MS.gene03728:CDS 35.0%
AACTTTACTCGAAGAGCTAT+TGG - chr4.3:44479608-44479627 None:intergenic 35.0%
AAGTTTGAACCTCTAGATCA+AGG - chr4.3:44477728-44477747 None:intergenic 35.0%
ACCCACATTTGTATCTAACA+TGG + chr4.3:44477927-44477946 MS.gene03728:intron 35.0%
ACTTTACTCGAAGAGCTATT+GGG - chr4.3:44479607-44479626 None:intergenic 35.0%
AGTTTCTTAGTACGATACAG+GGG - chr4.3:44479956-44479975 None:intergenic 35.0%
ATCAAAAAGAACATCACCAG+TGG - chr4.3:44479893-44479912 None:intergenic 35.0%
ATGTGTTCATCGTTGATATC+GGG + chr4.3:44477603-44477622 MS.gene03728:intron 35.0%
CAATGGGAGATACTATTATG+GGG + chr4.3:44480595-44480614 MS.gene03728:intron 35.0%
CAGATCCTTTATCTTCACTT+TGG - chr4.3:44480345-44480364 None:intergenic 35.0%
CCCACATTTGTATCTAACAT+GGG + chr4.3:44477928-44477947 MS.gene03728:intron 35.0%
CCCATGTTAGATACAAATGT+GGG - chr4.3:44477931-44477950 None:intergenic 35.0%
CCGCCCAAAATCATTAAAAA+AGG - chr4.3:44480317-44480336 None:intergenic 35.0%
GAATGAAGTAACACATTCTC+AGG - chr4.3:44479301-44479320 None:intergenic 35.0%
GACAATGGGAGATACTATTA+TGG + chr4.3:44480593-44480612 MS.gene03728:intron 35.0%
GAGAAGAAAATGAAGGGAAA+GGG + chr4.3:44479457-44479476 MS.gene03728:CDS 35.0%
GATACTATTATGGGGTTCTA+AGG + chr4.3:44480603-44480622 MS.gene03728:intron 35.0%
GATGTGTTCATCGTTGATAT+CGG + chr4.3:44477602-44477621 MS.gene03728:intron 35.0%
GATTACAGTTCAGAAGATGA+AGG + chr4.3:44477362-44477381 MS.gene03728:CDS 35.0%
GCCGAAAAAAAAGATTCTGA+TGG + chr4.3:44481585-44481604 MS.gene03728:CDS 35.0%
GTAGTTTCTTAGTACGATAC+AGG - chr4.3:44479958-44479977 None:intergenic 35.0%
TAGTGAAATCATTTCCCCTT+CGG + chr4.3:44478413-44478432 MS.gene03728:intron 35.0%
TCAGGGTCAAAATCAAGTAT+TGG - chr4.3:44481664-44481683 None:intergenic 35.0%
TCATTTATCAATCCAGTGAG+AGG - chr4.3:44481169-44481188 None:intergenic 35.0%
TCCCATGTTAGATACAAATG+TGG - chr4.3:44477932-44477951 None:intergenic 35.0%
TGAAAAAATCTCGGGAATAG+CGG - chr4.3:44481522-44481541 None:intergenic 35.0%
TGAACAAGATGCAAATGACA+TGG + chr4.3:44481624-44481643 MS.gene03728:CDS 35.0%
TGGGAAAAAAATACACCGAA+GGG - chr4.3:44478431-44478450 None:intergenic 35.0%
TGTTCAATCTAAGCTTGGTT+GGG + chr4.3:44477457-44477476 MS.gene03728:CDS 35.0%
TTGTTACAATTATCCTGCTC+AGG - chr4.3:44479550-44479569 None:intergenic 35.0%
TTGTTCAATCTAAGCTTGGT+TGG + chr4.3:44477456-44477475 MS.gene03728:CDS 35.0%
! CGCGCTCTTTTGAATTTTAA+GGG - chr4.3:44478981-44479000 None:intergenic 35.0%
! GTTTTCAACAGATTCTACAC+TGG - chr4.3:44479581-44479600 None:intergenic 35.0%
! TTAAAAAAGGTGTATGCTGC+TGG - chr4.3:44480304-44480323 None:intergenic 35.0%
! TTTTCGGTTGAAGAAACCTA+CGG + chr4.3:44477955-44477974 MS.gene03728:intron 35.0%
!! ATGAAGGTACTGAACACTAT+AGG + chr4.3:44477378-44477397 MS.gene03728:CDS 35.0%
!! CGATTCTAAGATCATCAACA+GGG - chr4.3:44480884-44480903 None:intergenic 35.0%
!! TCGATTCTAAGATCATCAAC+AGG - chr4.3:44480885-44480904 None:intergenic 35.0%
!! TGTTGATGATCTTAGAATCG+AGG + chr4.3:44480884-44480903 MS.gene03728:intron 35.0%
!! TTGATTTTGACCCTGAAAAG+AGG + chr4.3:44481668-44481687 MS.gene03728:CDS 35.0%
!! TTTGGTAATGATGCACACTT+GGG + chr4.3:44478118-44478137 MS.gene03728:intron 35.0%
!!! ACGGACTTATTTTTGGTGTT+TGG - chr4.3:44479376-44479395 None:intergenic 35.0%
!!! CATGCACTTTTTTCACAGTT+TGG - chr4.3:44480193-44480212 None:intergenic 35.0%
!!! CTATTTTGAAATTCGAGGGA+CGG + chr4.3:44478776-44478795 MS.gene03728:intron 35.0%
!!! TTTTGGTAATGATGCACACT+TGG + chr4.3:44478117-44478136 MS.gene03728:intron 35.0%
AAATGAAGGGAAAGGGTAAG+AGG + chr4.3:44479464-44479483 MS.gene03728:CDS 40.0%
AATGAAGGGAAAGGGTAAGA+GGG + chr4.3:44479465-44479484 MS.gene03728:CDS 40.0%
ACAGTGGTGACAACTATGAT+AGG + chr4.3:44479917-44479936 MS.gene03728:CDS 40.0%
ATCAACACAGACCACTGAAA+AGG + chr4.3:44479630-44479649 MS.gene03728:CDS 40.0%
ATCTCTTTAACCATGGAGAG+AGG - chr4.3:44479208-44479227 None:intergenic 40.0%
ATCTGCATCAAACACGAGTT+AGG - chr4.3:44478865-44478884 None:intergenic 40.0%
ATGATATGGGCTTCAAGTCT+CGG - chr4.3:44480980-44480999 None:intergenic 40.0%
ATTATATGCCAAGAGAAGGC+TGG + chr4.3:44480483-44480502 MS.gene03728:intron 40.0%
CAGTGGTGACAACTATGATA+GGG + chr4.3:44479918-44479937 MS.gene03728:CDS 40.0%
GAACCAGGAGAAGAAAATGA+AGG + chr4.3:44479450-44479469 MS.gene03728:CDS 40.0%
GATAACTTTCCTACCTTGCT+AGG - chr4.3:44481249-44481268 None:intergenic 40.0%
GATTTCCTTGGATCCTTTGA+CGG - chr4.3:44479334-44479353 None:intergenic 40.0%
GCAACTGCATATGGATATGT+AGG - chr4.3:44478090-44478109 None:intergenic 40.0%
GCGAAACAAGGTTTGAATCT+CGG + chr4.3:44477893-44477912 MS.gene03728:intron 40.0%
GGAGAAGAAAATGAAGGGAA+AGG + chr4.3:44479456-44479475 MS.gene03728:CDS 40.0%
GGGAAAAAAATACACCGAAG+GGG - chr4.3:44478430-44478449 None:intergenic 40.0%
GTCCTTCAAATTGTAAGGGT+CGG - chr4.3:44478808-44478827 None:intergenic 40.0%
GTGGGAAAAAAATACACCGA+AGG - chr4.3:44478432-44478451 None:intergenic 40.0%
GTTCAATCTAAGCTTGGTTG+GGG + chr4.3:44477458-44477477 MS.gene03728:CDS 40.0%
GTTCCAAATGCTAAGCACAA+AGG - chr4.3:44480776-44480795 None:intergenic 40.0%
TATTCAGGACCTTGATCTAG+AGG + chr4.3:44477716-44477735 MS.gene03728:intron 40.0%
TATTTCCTGCAGATTGCACT+TGG + chr4.3:44481493-44481512 MS.gene03728:intron 40.0%
TCAAAGGATCCAAGGAAATC+AGG + chr4.3:44479334-44479353 MS.gene03728:CDS 40.0%
TCAACTTGTCAGTCTTCCAT+TGG - chr4.3:44478642-44478661 None:intergenic 40.0%
TCAATAGACATGGTGACTTG+AGG + chr4.3:44481539-44481558 MS.gene03728:CDS 40.0%
TCTCCTTTGTGCTTAGCATT+TGG + chr4.3:44480770-44480789 MS.gene03728:intron 40.0%
TGAAAAGAGAAGGAAGGACA+AGG + chr4.3:44481798-44481817 MS.gene03728:CDS 40.0%
TGACAACTATGATAGGGATG+AGG + chr4.3:44479924-44479943 MS.gene03728:CDS 40.0%
TGATTGTAAAGAACCTGAGC+AGG + chr4.3:44479534-44479553 MS.gene03728:CDS 40.0%
TGCTTGGGATACTCTCAAAT+CGG + chr4.3:44477502-44477521 MS.gene03728:CDS 40.0%
TGGATCACTTCAAGCATTCA+GGG + chr4.3:44479095-44479114 MS.gene03728:CDS 40.0%
TGTTGATCTTAAGTGCAAGC+TGG + chr4.3:44479720-44479739 MS.gene03728:CDS 40.0%
TTAGAACCAAGAAGAACCTC+AGG - chr4.3:44479817-44479836 None:intergenic 40.0%
TTATATGCCAAGAGAAGGCT+GGG + chr4.3:44480484-44480503 MS.gene03728:intron 40.0%
TTCTTATGACCATCGTTTCC+TGG - chr4.3:44479664-44479683 None:intergenic 40.0%
TTGGATCACTTCAAGCATTC+AGG + chr4.3:44479094-44479113 MS.gene03728:CDS 40.0%
! AGAATCTAGCTCATTTGAGG+TGG - chr4.3:44477859-44477878 None:intergenic 40.0%
! GAATGCTCATTGATTGCATC+AGG - chr4.3:44481775-44481794 None:intergenic 40.0%
! GCGCGCTCTTTTGAATTTTA+AGG - chr4.3:44478982-44479001 None:intergenic 40.0%
! GGAAGAATCTAGCTCATTTG+AGG - chr4.3:44477862-44477881 None:intergenic 40.0%
! GTGATATCAAGGGTGTGTTT+GGG - chr4.3:44478372-44478391 None:intergenic 40.0%
! GTTCTTTTTGATCCTCACAG+TGG + chr4.3:44479901-44479920 MS.gene03728:CDS 40.0%
! TGAGTGTTTTCTGAACAGAG+TGG + chr4.3:44480067-44480086 MS.gene03728:intron 40.0%
! TGTGATATCAAGGGTGTGTT+TGG - chr4.3:44478373-44478392 None:intergenic 40.0%
! TTCACTGATTGATCCGTCAA+AGG + chr4.3:44479318-44479337 MS.gene03728:CDS 40.0%
! TTCCCTTCATTTTCTTCTCC+TGG - chr4.3:44479456-44479475 None:intergenic 40.0%
! TTGGTGTTTGGAAGGATAAG+TGG - chr4.3:44479364-44479383 None:intergenic 40.0%
! TTGTGCTTAGCATTTGGAAC+TGG + chr4.3:44480776-44480795 MS.gene03728:intron 40.0%
!! AAGTGCAAGCTGGTTGATTT+TGG + chr4.3:44479730-44479749 MS.gene03728:CDS 40.0%
!! ATGTTGATGACTTTACGGGT+CGG - chr4.3:44481903-44481922 None:intergenic 40.0%
!! CTTGGTGATGCTTTCAACAA+TGG + chr4.3:44477425-44477444 MS.gene03728:CDS 40.0%
!! GCATTGATGATGGAACTTCT+TGG + chr4.3:44481216-44481235 MS.gene03728:CDS 40.0%
!! TTCTACTGTTTGGCTTGCTT+GGG + chr4.3:44477487-44477506 MS.gene03728:CDS 40.0%
!! TTGGTAATGATGCACACTTG+GGG + chr4.3:44478119-44478138 MS.gene03728:intron 40.0%
!! TTTCTACTGTTTGGCTTGCT+TGG + chr4.3:44477486-44477505 MS.gene03728:CDS 40.0%
!!! AAGAGTCTGTATTTTGGTCC+TGG + chr4.3:44478524-44478543 MS.gene03728:intron 40.0%
!!! CTTTTGAGTTATAGGGCTAG+TGG + chr4.3:44477745-44477764 MS.gene03728:intron 40.0%
!!! GGGGTCATTTTTCTACTGTT+TGG + chr4.3:44477477-44477496 MS.gene03728:CDS 40.0%
!!! TTTTCATGTTCTAGTGGGCT+TGG + chr4.3:44479231-44479250 MS.gene03728:CDS 40.0%
AACAAGGTTTGAATCTCGGC+TGG + chr4.3:44477897-44477916 MS.gene03728:intron 45.0%
AAGGAAAGTCCAGAGGAATC+TGG + chr4.3:44479508-44479527 MS.gene03728:CDS 45.0%
AAGGCAATATAGGTGTCCTG+AGG + chr4.3:44479798-44479817 MS.gene03728:CDS 45.0%
ACAAGGTTTGAATCTCGGCT+GGG + chr4.3:44477898-44477917 MS.gene03728:intron 45.0%
ACACTACACTGAAGCTGCAA+TGG + chr4.3:44479003-44479022 MS.gene03728:CDS 45.0%
ACATCCATGAGTTGCGATTC+TGG + chr4.3:44481563-44481582 MS.gene03728:CDS 45.0%
ACCTGCACTTATCCATGGAT+GGG - chr4.3:44481716-44481735 None:intergenic 45.0%
ACTCAACTCCAGCAGATATG+TGG + chr4.3:44479839-44479858 MS.gene03728:CDS 45.0%
AGGAAAGTCCAGAGGAATCT+GGG + chr4.3:44479509-44479528 MS.gene03728:CDS 45.0%
AGGAAAGTTATCTGCTCTGG+TGG + chr4.3:44481257-44481276 MS.gene03728:intron 45.0%
AGGTTGTGTACTAGTCAGTG+AGG - chr4.3:44481755-44481774 None:intergenic 45.0%
ATACACACATGCACGCCATT+AGG - chr4.3:44479121-44479140 None:intergenic 45.0%
CACTTATCCATGGATGGGTA+AGG - chr4.3:44481711-44481730 None:intergenic 45.0%
CATCACCAAGTTTCACAGCA+TGG - chr4.3:44477415-44477434 None:intergenic 45.0%
CTCAAAGCAGATGCAAGCAA+AGG - chr4.3:44479866-44479885 None:intergenic 45.0%
GACCGACCCTTACAATTTGA+AGG + chr4.3:44478803-44478822 MS.gene03728:intron 45.0%
GAGAAGGAAGGACAAGGAAA+AGG + chr4.3:44481804-44481823 MS.gene03728:CDS 45.0%
GCAGCTTCTTTCTCATGGAA+CGG - chr4.3:44479693-44479712 None:intergenic 45.0%
GGGTGAGAAGATTATCACCA+AGG - chr4.3:44479156-44479175 None:intergenic 45.0%
GGTAGGAAAGTTATCTGCTC+TGG + chr4.3:44481254-44481273 MS.gene03728:intron 45.0%
GGTTGTGTACTAGTCAGTGA+GGG - chr4.3:44481754-44481773 None:intergenic 45.0%
GTCAAAGCTTCCCATTCTTG+TGG + chr4.3:44481107-44481126 MS.gene03728:intron 45.0%
TAATGGCGTGCATGTGTGTA+TGG + chr4.3:44479120-44479139 MS.gene03728:CDS 45.0%
TCATAGTTGTCACCACTGTG+AGG - chr4.3:44479916-44479935 None:intergenic 45.0%
TCTTGGAAAGATGCCTAGCA+AGG + chr4.3:44481233-44481252 MS.gene03728:CDS 45.0%
TGCTGGTACTCGATCAAAGT+TGG + chr4.3:44480214-44480233 MS.gene03728:intron 45.0%
TGGGATACTCTCAAATCGGT+GGG + chr4.3:44477506-44477525 MS.gene03728:intron 45.0%
TGGGTACTAGTGGTGTATTC+AGG + chr4.3:44477701-44477720 MS.gene03728:intron 45.0%
TGTGTTTGGGAAGAGGGTTT+AGG - chr4.3:44478359-44478378 None:intergenic 45.0%
TGTTCGACTCAATTGAGCAG+CGG - chr4.3:44480276-44480295 None:intergenic 45.0%
TGTTGAGAAGGAAAGTCCAG+AGG + chr4.3:44479501-44479520 MS.gene03728:CDS 45.0%
TTCAAGCATTCAGGGCCTAA+TGG + chr4.3:44479103-44479122 MS.gene03728:CDS 45.0%
TTCCATGAGAAAGAAGCTGC+TGG + chr4.3:44479693-44479712 MS.gene03728:CDS 45.0%
TTGATCCGTCAAAGGATCCA+AGG + chr4.3:44479326-44479345 MS.gene03728:CDS 45.0%
TTGGGATACTCTCAAATCGG+TGG + chr4.3:44477505-44477524 MS.gene03728:intron 45.0%
TTTGGGAAGAGGGTTTAGGA+GGG - chr4.3:44478355-44478374 None:intergenic 45.0%
! AAAAGGTGTATGCTGCTGGT+TGG - chr4.3:44480300-44480319 None:intergenic 45.0%
! GTGAAAAAAGTGCATGCTGC+TGG + chr4.3:44480197-44480216 MS.gene03728:intron 45.0%
! TTCTTCTCCTGGTTCTTCGT+CGG - chr4.3:44479445-44479464 None:intergenic 45.0%
!! GGATCATCTGGCATTGATGA+TGG + chr4.3:44481206-44481225 MS.gene03728:intron 45.0%
!! TGTTGATGACTTTACGGGTC+GGG - chr4.3:44481902-44481921 None:intergenic 45.0%
!!! CGGGAGTTTTTGAGTGACAT+AGG - chr4.3:44481883-44481902 None:intergenic 45.0%
!!! ATATTTTTTTTTTTTTGAAA+TGG - chr4.3:44478504-44478523 None:intergenic 5.0%
AACTTCCACCAACTCCTGCT+CGG - chr4.3:44481830-44481849 None:intergenic 50.0%
AAGAGGGTTTAGGAGGGGAA+GGG - chr4.3:44478349-44478368 None:intergenic 50.0%
ACCCATCCATGGATAAGTGC+AGG + chr4.3:44481712-44481731 MS.gene03728:CDS 50.0%
ACTGAAAAGGACCTTGCACC+AGG + chr4.3:44479643-44479662 MS.gene03728:CDS 50.0%
ACTGAACACTATAGGCGTGG+TGG + chr4.3:44477386-44477405 MS.gene03728:CDS 50.0%
AGGTGTCCTGAGGTTCTTCT+TGG + chr4.3:44479808-44479827 MS.gene03728:CDS 50.0%
ATGCACACTTGGGGTGTGTT+TGG + chr4.3:44478128-44478147 MS.gene03728:intron 50.0%
CAAGGCGCACTAATAAGCTC+GGG - chr4.3:44478454-44478473 None:intergenic 50.0%
CAATCATCCCCAGATTCCTC+TGG - chr4.3:44479520-44479539 None:intergenic 50.0%
CTGAACACTATAGGCGTGGT+GGG + chr4.3:44477387-44477406 MS.gene03728:CDS 50.0%
CTTATTAGTGCGCCTTGCAC+GGG + chr4.3:44478457-44478476 MS.gene03728:intron 50.0%
GACCTGCACTTATCCATGGA+TGG - chr4.3:44481717-44481736 None:intergenic 50.0%
GCAAAGGACCACATATCTGC+TGG - chr4.3:44479850-44479869 None:intergenic 50.0%
GCAAGGCGCACTAATAAGCT+CGG - chr4.3:44478455-44478474 None:intergenic 50.0%
GCTTATTAGTGCGCCTTGCA+CGG + chr4.3:44478456-44478475 MS.gene03728:intron 50.0%
GGAAAGATGCCTAGCAAGGT+AGG + chr4.3:44481237-44481256 MS.gene03728:intron 50.0%
GGAAAGTCCAGAGGAATCTG+GGG + chr4.3:44479510-44479529 MS.gene03728:CDS 50.0%
GGGTACCATGCTGTGAAACT+TGG + chr4.3:44477407-44477426 MS.gene03728:CDS 50.0%
GTTTGGGAAGAGGGTTTAGG+AGG - chr4.3:44478356-44478375 None:intergenic 50.0%
TAGATTCTTCCATGCCCACG+AGG + chr4.3:44477871-44477890 MS.gene03728:intron 50.0%
TATCTCACCCAGCCTTCTCT+TGG - chr4.3:44480494-44480513 None:intergenic 50.0%
TGCACACTTGGGGTGTGTTT+GGG + chr4.3:44478129-44478148 MS.gene03728:intron 50.0%
TGCCAGCAGCTTCTTTCTCA+TGG - chr4.3:44479698-44479717 None:intergenic 50.0%
TGTGTTTGGGAGGAGGGTTT+AGG + chr4.3:44478142-44478161 MS.gene03728:intron 50.0%
TTAACCAACAAGCCCGTGCA+AGG - chr4.3:44478472-44478491 None:intergenic 50.0%
TTCCTGCAGATTGCACTTGG+TGG + chr4.3:44481496-44481515 MS.gene03728:intron 50.0%
TTGGGAAGAGGGTTTAGGAG+GGG - chr4.3:44478354-44478373 None:intergenic 50.0%
TTTGGGAGGAGGGTTTAGGA+GGG + chr4.3:44478146-44478165 MS.gene03728:intron 50.0%
! AGTGGAGCACCTGATTTCCT+TGG - chr4.3:44479346-44479365 None:intergenic 50.0%
! ATCTGCTTTGAGCTTGCCAC+TGG + chr4.3:44479874-44479893 MS.gene03728:CDS 50.0%
! CAAACCTTGTTTCGCCTCGT+GGG - chr4.3:44477888-44477907 None:intergenic 50.0%
! CAAGGGTGTGTTTGGGAAGA+GGG - chr4.3:44478365-44478384 None:intergenic 50.0%
! GGTACTGAACACTATAGGCG+TGG + chr4.3:44477383-44477402 MS.gene03728:CDS 50.0%
! TCAAACCTTGTTTCGCCTCG+TGG - chr4.3:44477889-44477908 None:intergenic 50.0%
! TCAAGGGTGTGTTTGGGAAG+AGG - chr4.3:44478366-44478385 None:intergenic 50.0%
! TGGTGCAAGGTCCTTTTCAG+TGG - chr4.3:44479644-44479663 None:intergenic 50.0%
!! AGTTGGTGGAAGTTGGTGTG+AGG + chr4.3:44481836-44481855 MS.gene03728:CDS 50.0%
!! ATGCATTGGCTTCCTCTCAC+TGG + chr4.3:44481154-44481173 MS.gene03728:intron 50.0%
!! CAATGTGGGTTGGGTACTAG+TGG + chr4.3:44477691-44477710 MS.gene03728:intron 50.0%
!! CAGCTGTTGGCCTCTTTTCA+GGG - chr4.3:44481681-44481700 None:intergenic 50.0%
AAGGGTAAGAGGGTGGCTCA+AGG + chr4.3:44479475-44479494 MS.gene03728:CDS 55.0%
AATTGAGCAGCGGCACTGCT+GGG - chr4.3:44480266-44480285 None:intergenic 55.0%
ACACTTGGGGTGTGTTTGGG+AGG + chr4.3:44478132-44478151 MS.gene03728:intron 55.0%
ACTGCTGGGAGCTGTAGAGA+CGG - chr4.3:44480252-44480271 None:intergenic 55.0%
AGGAGGGTTTAGGAGGGGAA+GGG + chr4.3:44478152-44478171 MS.gene03728:intron 55.0%
AGTGAGGGCTCAAGAGTTCG+AGG - chr4.3:44481739-44481758 None:intergenic 55.0%
CGAGGACCTGCACTTATCCA+TGG - chr4.3:44481721-44481740 None:intergenic 55.0%
CGATCAAAGTTGGCTGCTGC+TGG + chr4.3:44480224-44480243 MS.gene03728:intron 55.0%
CTCAGTGCCTTACCCATCCA+TGG + chr4.3:44481701-44481720 MS.gene03728:CDS 55.0%
GAAGAGGGTTTAGGAGGGGA+AGG - chr4.3:44478350-44478369 None:intergenic 55.0%
GAAGGGAAAGGGTAAGAGGG+TGG + chr4.3:44479468-44479487 MS.gene03728:CDS 55.0%
GACCATCGTTTCCTGGTGCA+AGG - chr4.3:44479657-44479676 None:intergenic 55.0%
GACCTTGCACCAGGAAACGA+TGG + chr4.3:44479652-44479671 MS.gene03728:CDS 55.0%
GCGCACTAATAAGCTCGGGT+GGG - chr4.3:44478450-44478469 None:intergenic 55.0%
GGCTCAAGGCTGTGTTGAGA+AGG + chr4.3:44479489-44479508 MS.gene03728:CDS 55.0%
GTTTGGGAGGAGGGTTTAGG+AGG + chr4.3:44478145-44478164 MS.gene03728:intron 55.0%
TCGGCCAGAATCGCAACTCA+TGG - chr4.3:44481570-44481589 None:intergenic 55.0%
TCGTGGAGTTCCTCTCTCCA+TGG + chr4.3:44479195-44479214 MS.gene03728:CDS 55.0%
TGGAGATCCGACGAAGAACC+AGG + chr4.3:44479435-44479454 MS.gene03728:CDS 55.0%
TTGGGAGGAGGGTTTAGGAG+GGG + chr4.3:44478147-44478166 MS.gene03728:intron 55.0%
TTGGGGTGTGTTTGGGAGGA+GGG + chr4.3:44478136-44478155 MS.gene03728:intron 55.0%
!! GAGCAGGAGTTGGTGGAAGT+TGG + chr4.3:44481829-44481848 MS.gene03728:CDS 55.0%
!! GCAGCTGTTGGCCTCTTTTC+AGG - chr4.3:44481682-44481701 None:intergenic 55.0%
!! GTAAGGCACTGAGCAGCTGT+TGG - chr4.3:44481694-44481713 None:intergenic 55.0%
AAAGGCCGAGCAGGAGTTGG+TGG + chr4.3:44481822-44481841 MS.gene03728:CDS 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG + chr4.3:44478155-44478174 MS.gene03728:intron 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG - chr4.3:44478174-44478155 None:intergenic 60.0%
CAATTGAGCAGCGGCACTGC+TGG - chr4.3:44480267-44480286 None:intergenic 60.0%
CATGCCCACGAGGCGAAACA+AGG + chr4.3:44477881-44477900 MS.gene03728:intron 60.0%
CTTGGGGTGTGTTTGGGAGG+AGG + chr4.3:44478135-44478154 MS.gene03728:intron 60.0%
CTTGTTTCGCCTCGTGGGCA+TGG - chr4.3:44477883-44477902 None:intergenic 60.0%
GAGGAGGGTTTAGGAGGGGA+AGG + chr4.3:44478151-44478170 MS.gene03728:intron 60.0%
GGAAAAGGCCGAGCAGGAGT+TGG + chr4.3:44481819-44481838 MS.gene03728:CDS 60.0%
GGACAAGGAAAAGGCCGAGC+AGG + chr4.3:44481813-44481832 MS.gene03728:CDS 60.0%
GGCCACCAAGTGCAATCTGC+AGG - chr4.3:44481501-44481520 None:intergenic 60.0%
GGCGCACTAATAAGCTCGGG+TGG - chr4.3:44478451-44478470 None:intergenic 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG + chr4.3:44478156-44478175 MS.gene03728:intron 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG - chr4.3:44478175-44478156 None:intergenic 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG + chr4.3:44478157-44478176 MS.gene03728:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG - chr4.3:44478176-44478157 None:intergenic 60.0%
TAGGAGGGGAAGGGAGGGGA+GGG + chr4.3:44478161-44478180 MS.gene03728:intron 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG - chr4.3:44478180-44478161 None:intergenic 65.0%
TGCGCCTTGCACGGGCTTGT+TGG + chr4.3:44478465-44478484 MS.gene03728:intron 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG + chr4.3:44478160-44478179 MS.gene03728:intron 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG - chr4.3:44478179-44478160 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 44477338 44481924 44477338 ID=MS.gene03728
chr4.3 mRNA 44477338 44481924 44477338 ID=MS.gene03728.t1;Parent=MS.gene03728
chr4.3 exon 44477338 44477523 44477338 ID=MS.gene03728.t1.exon1;Parent=MS.gene03728.t1
chr4.3 CDS 44477338 44477523 44477338 ID=cds.MS.gene03728.t1;Parent=MS.gene03728.t1
chr4.3 exon 44478968 44479945 44478968 ID=MS.gene03728.t1.exon2;Parent=MS.gene03728.t1
chr4.3 CDS 44478968 44479945 44478968 ID=cds.MS.gene03728.t1;Parent=MS.gene03728.t1
chr4.3 exon 44481207 44481254 44481207 ID=MS.gene03728.t1.exon3;Parent=MS.gene03728.t1
chr4.3 CDS 44481207 44481254 44481207 ID=cds.MS.gene03728.t1;Parent=MS.gene03728.t1
chr4.3 exon 44481505 44481924 44481505 ID=MS.gene03728.t1.exon4;Parent=MS.gene03728.t1
chr4.3 CDS 44481505 44481924 44481505 ID=cds.MS.gene03728.t1;Parent=MS.gene03728.t1
Gene Sequence

>MS.gene03728

ATGGAGAGAAAAGGAATCAACAATGATTACAGTTCAGAAGATGAAGGTACTGAACACTATAGGCGTGGTGGGTACCATGCTGTGAAACTTGGTGATGCTTTCAACAATGGCTGCTATGTTGTTCAATCTAAGCTTGGTTGGGGTCATTTTTCTACTGTTTGGCTTGCTTGGGATACTCTCAAATCGGTGGGTGTTTCCTTTTTAACAACTTCATTGTTTTCTTACCTTTTTTTTTGTTGTTTTTGTTTTTGGAATTTGTTGTTTGATGTGTTCATCGTTGATATCGGGTATCATTAGAGTTTTCCGTAGTAATTATGAAATTACGACTTTGATTTTGATGTAGAAATAGTAATCAATGTGGGTTGGGTACTAGTGGTGTATTCAGGACCTTGATCTAGAGGTTCAAACTTTTGAGTTATAGGGCTAGTGGTGTAAAAAGATTTTTTTAGGGGTTCAAAATGCAAAATATATAGGGTTATATTTGCATTGCTTTTTAAAGTTTAGGGGGTTCAATTGATCCACCTCAAATGAGCTAGATTCTTCCATGCCCACGAGGCGAAACAAGGTTTGAATCTCGGCTGGGAAAGTTACCCACATTTGTATCTAACATGGGATTATTTTCGGTTGAAGAAACCTACGGAAAACAAAAAAAAAAAAAACTAGGAAATTGTAATAACCTTGAAAATAGGAAGTAAAATGGTGAAAATGTTATGTTTTTGTTAATATTACCAAAAATATAGAACACATTACCTACATATCCATATGCAGTTGCATATTTTTTTTGGTAATGATGCACACTTGGGGTGTGTTTGGGAGGAGGGTTTAGGAGGGGAAGGGAGGGGAGGGCTCACTTTTAATTTTTAAATTACGAACAATGTAAAATGTCTTTTTAAGATAAATTAAGTGTTTTTGAAGTATTATATGATCATTTATCATGTTGTTAATTCAATTTTTTAAAAATCATTTTATAATGTCTTTAAATTAAAAAAGGAATGTAAGCCCTCCCCTCCCTTCCCCTCCTAAACCCTCTTCCCAAACACACCCTTGATATCACATTAGTATCAACATTCGATACTAGTGAAATCATTTCCCCTTCGGTGTATTTTTTTCCCACCCGAGCTTATTAGTGCGCCTTGCACGGGCTTGTTGGTTAATAATATTGGCCATTTCAAAAAAAAAAAAATATAAGAGTCTGTATTTTGGTCCTGGAAATTTGTAAAAGTTGAGCAATGTAGTCCCTCAAACATATGAAACAGCAAATTAGTCCCTTTTATTTGAAGAACGTCAATCAAAATTCAAAACCAATGGAAGACTGACAAGTTGACTTGAATAGTCTCTTGTTGAATTAAGACAAGCATACAACCTTTACAATTGTTTTGCTTATTTTAAAAAAAAAAAAGACTAAATTGACTGATGTTTGATTTAAGGGACTAAATTGCTATTTTGAAATTCGAGGGACGGAATTGACCGACCCTTACAATTTGAAGGACTAGAATGTTGATTTACTCAACATAGAACAAACTTCCTAACTCGTGTTTGATGCAGATCTTATAACAAATTACATTACCCTTACCTGATATTTTTGGATTTCTGAACTCTGTTAATGATTTGGAAAGTTTTTTGTTTGTAGCGTTATGTGGCCCTTAAAATTCAAAAGAGCGCGCAACACTACACTGAAGCTGCAATGGATGAAATAAAGATTCTCAAACAAATTGAAGAGGGAGACCCTGATGACAAAAAATGTGTTGTGAAGCTTTTGGATCACTTCAAGCATTCAGGGCCTAATGGCGTGCATGTGTGTATGGTTTTTGAATTCCTTGGTGATAATCTTCTCACCCTTATCAAATATAGTGACTATCGTGGAGTTCCTCTCTCCATGGTTAAAGAGATATGTTTTCATGTTCTAGTGGGCTTGGATTACTTGCATCGTGAGCTATCTGTCATACACACTGATTTGAAGCCTGAGAATGTGTTACTTCATTCACTGATTGATCCGTCAAAGGATCCAAGGAAATCAGGTGCTCCACTTATCCTTCCAAACACCAAAAATAAGTCCGTGTCTAATAATGACATAATCCAAAACAGTAAAATTGGGAATGGAGATCCGACGAAGAACCAGGAGAAGAAAATGAAGGGAAAGGGTAAGAGGGTGGCTCAAGGCTGTGTTGAGAAGGAAAGTCCAGAGGAATCTGGGGATGATTGTAAAGAACCTGAGCAGGATAATTGTAACAATGTGAAATCCAGTGTAGAATCTGTTGAAAACAAACCCAATAGCTCTTCGAGTAAAGTTGAATCAACACAGACCACTGAAAAGGACCTTGCACCAGGAAACGATGGTCATAAGAAAAGTAGCCGTTCCATGAGAAAGAAGCTGCTGGCAGCTGTTGATCTTAAGTGCAAGCTGGTTGATTTTGGTAATGCTTGTTGGACTTATAAACAGTTCACAAATGATATTCAAACAAGGCAATATAGGTGTCCTGAGGTTCTTCTTGGTTCTAAATACTCAACTCCAGCAGATATGTGGTCCTTTGCTTGCATCTGCTTTGAGCTTGCCACTGGTGATGTTCTTTTTGATCCTCACAGTGGTGACAACTATGATAGGGATGAGGCAAGTTCCCCTGTATCGTACTAAGAAACTACTGTTTTGCTTTATTTTGTGCTATTATTATTTGATGTTGGTAAATTTAATTGTGATAATCTTTATTAGTCTTTGAAAACTGATTTGTTACTGAGTGTTTTCTGAACAGAGTGGAAGCTCTTTTGTCCTTAAATTTTTGGTTGGTTATTATACAACTTATTGTTCAACCTTTTCATGCTTTTACAATCATTTACTACCTTTAACGATTTTCAGTCCAAACTGTGAAAAAAGTGCATGCTGCTGGTACTCGATCAAAGTTGGCTGCTGCTGGTACCGTCTCTACAGCTCCCAGCAGTGCCGCTGCTCAATTGAGTCGAACATCCAACCAGCAGCATACACCTTTTTTAATGATTTTGGGCGGTAAATCCAAAGTGAAGATAAAGGATCTGTTTGAAACTTTTAATTAAGTTAAAGGTTCCCGGTACAGTTTTGCATATATTTAATTATCTACCGACTTTAGTAAATTACTTTTTGAAAGAAAAAGGTAAATGCTATACTTTGGAAATAATTATATGCCAAGAGAAGGCTGGGTGAGATATAGTTCTTCTATCTAGATAGAGCTTTAAATTAAGATGCTGAAAGCTTTGCATAAGCTATAGAATTATAATTTATAGTTTGACAATGGGAGATACTATTATGGGGTTCTAAGGCCTAGTAAAATAATACAACGGATTTGTCTAGGATAGTTCAAAAACATTTACCCCCTAAACATACTATTTTCTGTTTGATGTCTAGACCAATAATATTATCATGCTTGTCTCTTGATTCTCATTTATTTATGCACTCTTTATAACTCTCCTTTGTGCTTAGCATTTGGAACTGGAAAACATAATTTGGCTAAAACATGGCCTGTTGTTTCAACAAGAATTTGTAATCTTCTCAATTTTGAATATGTTTTGCTGTTACCCTGTTGATGATCTTAGAATCGAGGCTTCAGTATGATTTTTTGTCACTAATTAACGAACATTTTGAATTAATAATTGGAAAAATAGTTAAAATCACCGAGACTTGAAGCCCATATCATATAAAGTTTATATTTTGTCCTCTCAAGATTTACATAAAATATTGACATCGATTTTAATGATAAACCTAGAAGTTTTGACTCAACATAAATTAAAGAGATAGATACAGGTCAAAGCTTCCCATTCTTGTGGAATATCTTTAAAAATTTGAAAAGAATGCATTGGCTTCCTCTCACTGGATTGATAAATGATATCTATTTGTTTTACAGGATCATCTGGCATTGATGATGGAACTTCTTGGAAAGATGCCTAGCAAGGTAGGAAAGTTATCTGCTCTGGTGGAAATTGTGAAGTTACATGTCATTGATTTTACATGTTTTCATTTTCAATAAACACTATTCATTTTTATTTTATTTTTTTATAATTGTGTACTCAATTTGTCTCTTAATGAGTTTTTTTTTTTTTTTTTTTTCGCTTAAAAAAAACAAAACAATAGGGTATAAAATACTGCATTTCATTCTGAAAATTGGATGTCAACTGCAAAATTTAATCAAATATTTCCTGCAGATTGCACTTGGTGGCCGCTATTCCCGAGATTTTTTCAATAGACATGGTGACTTGAGGCACATCCATGAGTTGCGATTCTGGCCGAAAAAAAAGATTCTGATGGAGAAGTATAGTTTCAGTGAACAAGATGCAAATGACATGGCTGACTTCCTTCTTCCAATACTTGATTTTGACCCTGAAAAGAGGCCAACAGCTGCTCAGTGCCTTACCCATCCATGGATAAGTGCAGGTCCTCGAACTCTTGAGCCCTCACTGACTAGTACACAACCTGATGCAATCAATGAGCATTCATTTGAAAAGAGAAGGAAGGACAAGGAAAAGGCCGAGCAGGAGTTGGTGGAAGTTGGTGTGAGGAATATATCTATTAATGGATCTCCTATGTCACTCAAAAACTCCCGACCCGTAAAGTCATCAACATAG
Protein sequence

>MS.gene03728.t1

MERKGINNDYSSEDEGTEHYRRGGYHAVKLGDAFNNGCYVVQSKLGWGHFSTVWLAWDTLKSRYVALKIQKSAQHYTEAAMDEIKILKQIEEGDPDDKKCVVKLLDHFKHSGPNGVHVCMVFEFLGDNLLTLIKYSDYRGVPLSMVKEICFHVLVGLDYLHRELSVIHTDLKPENVLLHSLIDPSKDPRKSGAPLILPNTKNKSVSNNDIIQNSKIGNGDPTKNQEKKMKGKGKRVAQGCVEKESPEESGDDCKEPEQDNCNNVKSSVESVENKPNSSSSKVESTQTTEKDLAPGNDGHKKSSRSMRKKLLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADMWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGKMPSKIALGGRYSRDFFNRHGDLRHIHELRFWPKKKILMEKYSFSEQDANDMADFLLPILDFDPEKRPTAAQCLTHPWISAGPRTLEPSLTSTQPDAINEHSFEKRRKDKEKAEQELVEVGVRNISINGSPMSLKNSRPVKSST