Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065890.t1 | XP_013456629.1 | 98.8 | 342 | 4 | 0 | 1 | 342 | 1 | 342 | 4.70E-171 | 610.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065890.t1 | Q9FNY2 | 67.5 | 289 | 60 | 5 | 87 | 342 | 98 | 385 | 6.1e-95 | 349.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065890.t1 | A0A072UXQ9 | 98.8 | 342 | 4 | 0 | 1 | 342 | 1 | 342 | 3.4e-171 | 610.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene065890.t1 | TF | E2F-DP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene57178 | MS.gene065890 | PPI |
| MS.gene065890 | MS.gene91416 | PPI |
| MS.gene041917 | MS.gene065890 | PPI |
| MS.gene09552 | MS.gene065890 | PPI |
| MS.gene011754 | MS.gene065890 | PPI |
| MS.gene065890 | MS.gene09551 | PPI |
| MS.gene92318 | MS.gene065890 | PPI |
| MS.gene98552 | MS.gene065890 | PPI |
| MS.gene065890 | MS.gene94315 | PPI |
| MS.gene065890 | MS.gene20252 | PPI |
| MS.gene065890 | MS.gene069975 | PPI |
| MS.gene065890 | MS.gene024895 | PPI |
| MS.gene014301 | MS.gene065890 | PPI |
| MS.gene000128 | MS.gene065890 | PPI |
| MS.gene99648 | MS.gene065890 | PPI |
| MS.gene94307 | MS.gene065890 | PPI |
| MS.gene070538 | MS.gene065890 | PPI |
| MS.gene66836 | MS.gene065890 | PPI |
| MS.gene016712 | MS.gene065890 | PPI |
| MS.gene065890 | MS.gene80094 | PPI |
| MS.gene065890 | MS.gene44510 | PPI |
| MS.gene065890 | MS.gene015212 | PPI |
| MS.gene20253 | MS.gene065890 | PPI |
| MS.gene065890 | MS.gene015213 | PPI |
| MS.gene064876 | MS.gene065890 | PPI |
| MS.gene065890 | MS.gene81646 | PPI |
| MS.gene57177 | MS.gene065890 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065890.t1 | MTR_4g077797 | 99.123 | 342 | 3 | 0 | 1 | 342 | 1 | 342 | 0.0 | 700 |
| MS.gene065890.t1 | MTR_4g077803 | 84.682 | 346 | 47 | 3 | 1 | 342 | 1 | 344 | 0.0 | 600 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065890.t1 | AT5G03415 | 64.067 | 359 | 91 | 8 | 21 | 342 | 28 | 385 | 5.26e-148 | 422 |
| MS.gene065890.t1 | AT5G03415 | 62.117 | 359 | 92 | 9 | 21 | 342 | 28 | 379 | 4.20e-140 | 402 |
| MS.gene065890.t1 | AT5G02470 | 51.376 | 218 | 97 | 3 | 63 | 279 | 32 | 241 | 1.33e-75 | 234 |
| MS.gene065890.t1 | AT5G02470 | 51.376 | 218 | 97 | 3 | 63 | 279 | 32 | 241 | 1.33e-75 | 234 |
| MS.gene065890.t1 | AT5G02470 | 51.376 | 218 | 97 | 3 | 63 | 279 | 32 | 241 | 1.33e-75 | 234 |
Find 88 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCTCAAGGCAATGGATTT+TGG | 0.207282 | 4.2:-32006399 | MS.gene065890:CDS |
| TCCACTCCCTGGAATATTAA+AGG | 0.271571 | 4.2:-32006238 | MS.gene065890:CDS |
| TATTATTGCTACAAGTTTGT+AGG | 0.286595 | 4.2:-32007392 | MS.gene065890:intron |
| ATTGTTCATTTCGTTGAATA+AGG | 0.299922 | 4.2:+32007360 | None:intergenic |
| TATACCTGAACCAGAATAAA+AGG | 0.312486 | 4.2:+32007296 | None:intergenic |
| ACTCTTGCCTTTAATATTCC+AGG | 0.333887 | 4.2:+32006231 | None:intergenic |
| TGATGCTCTGAATGTTCTTA+TGG | 0.333958 | 4.2:-32007811 | MS.gene065890:CDS |
| AACCTTTCATACTAAATTGC+CGG | 0.339281 | 4.2:+32009029 | None:intergenic |
| TCCTGCTCGTTGAGCCTGAT+TGG | 0.340052 | 4.2:+32010005 | None:intergenic |
| TGGTGGTTTGTCCCCTGATC+AGG | 0.346346 | 4.2:-32007977 | MS.gene065890:intron |
| CAGTTTCAAACATGTTAGTT+AGG | 0.354238 | 4.2:-32006275 | MS.gene065890:CDS |
| GAAGATAAGAAAACCTGATC+AGG | 0.380867 | 4.2:+32007964 | None:intergenic |
| CGAAGAGGATGAGGAATTGA+TGG | 0.384755 | 4.2:-32010050 | MS.gene065890:CDS |
| GGTTGCGGAACTACGATTTC+CGG | 0.384781 | 4.2:-32010028 | MS.gene065890:CDS |
| TTAAATAGACACAGCGTCTT+GGG | 0.420475 | 4.2:-32007610 | MS.gene065890:intron |
| ACTACGATTTCCGGCCAATC+AGG | 0.431678 | 4.2:-32010019 | MS.gene065890:CDS |
| GGCTCAACGAGCAGGAGTGC+CGG | 0.432075 | 4.2:-32009998 | MS.gene065890:CDS |
| GCCTTTAATATTCCAGGGAG+TGG | 0.432840 | 4.2:+32006237 | None:intergenic |
| GTCTGCTCACTCCGGCTAGA+TGG | 0.433095 | 4.2:+32009971 | None:intergenic |
| AGACACAGCGTCTTGGGCTT+AGG | 0.448668 | 4.2:-32007604 | MS.gene065890:CDS |
| TCCTCATGCAACTGTGGAAG+TGG | 0.457569 | 4.2:-32006768 | MS.gene065890:CDS |
| ATTAAATAGACACAGCGTCT+TGG | 0.463317 | 4.2:-32007611 | MS.gene065890:intron |
| GCCAATCAGGCTCAACGAGC+AGG | 0.466675 | 4.2:-32010006 | MS.gene065890:CDS |
| GGGGAAGGTTCTAGCATGTC+AGG | 0.468504 | 4.2:-32006324 | MS.gene065890:CDS |
| AGACTCACGCAACTACTGCC+TGG | 0.468595 | 4.2:+32009873 | None:intergenic |
| GGCTATGAATATTATTTCCA+AGG | 0.477616 | 4.2:-32007790 | MS.gene065890:CDS |
| AGGTAAAGATACACCTCCAC+TGG | 0.479385 | 4.2:+32007316 | None:intergenic |
| CTGCTCAAGCTCCTGCAGAT+AGG | 0.480130 | 4.2:+32007559 | None:intergenic |
| GAGTGATATTGAAGAACTAA+AGG | 0.483152 | 4.2:-32007724 | MS.gene065890:intron |
| TTCCTCATCCTCTTCGTCCA+CGG | 0.484217 | 4.2:+32010057 | None:intergenic |
| GTCCGTGGACGAAGAGGATG+AGG | 0.484659 | 4.2:-32010059 | MS.gene065890:CDS |
| GCTCAACGAGCAGGAGTGCC+GGG | 0.485828 | 4.2:-32009997 | MS.gene065890:CDS |
| CTCCGGCAATTTAGTATGAA+AGG | 0.485877 | 4.2:-32009031 | MS.gene065890:intron |
| GCTCGTTGAGCCTGATTGGC+CGG | 0.490544 | 4.2:+32010009 | None:intergenic |
| AATGAACAATTATATAGCTC+AGG | 0.501710 | 4.2:-32007347 | MS.gene065890:CDS |
| AGCCGGAGTGAGCAGACCAC+GGG | 0.509849 | 4.2:-32009965 | MS.gene065890:CDS |
| GGGGACAAACCACCATTGCT+TGG | 0.511216 | 4.2:+32007985 | None:intergenic |
| GACTCACGCAACTACTGCCT+GGG | 0.512394 | 4.2:+32009874 | None:intergenic |
| ATAAGAATGGAAGAGGGCTC+CGG | 0.512718 | 4.2:-32009048 | MS.gene065890:CDS |
| CTCTTGCCTTTAATATTCCA+GGG | 0.515553 | 4.2:+32006232 | None:intergenic |
| TGTGAGAAGGTAGAAAGTAA+AGG | 0.516897 | 4.2:-32008520 | MS.gene065890:CDS |
| TGATGACGATGCTGCTTCCC+AGG | 0.519370 | 4.2:-32009891 | MS.gene065890:CDS |
| CAATTATGTTCTCAAGGCAA+TGG | 0.525211 | 4.2:-32006406 | MS.gene065890:CDS |
| GATGAGGAATTGATGGGTTG+CGG | 0.526792 | 4.2:-32010043 | MS.gene065890:CDS |
| CCGACATCACCTCCACTCCC+TGG | 0.527073 | 4.2:-32006249 | MS.gene065890:CDS |
| GTCAGGCATGTATCAATCAC+AGG | 0.555543 | 4.2:-32006307 | MS.gene065890:CDS |
| TTGTCGTCATGCAGCTCGAA+AGG | 0.559999 | 4.2:+32006426 | None:intergenic |
| AAGATAAGAAAACCTGATCA+GGG | 0.563158 | 4.2:+32007965 | None:intergenic |
| CACACAATATTGCGGATGGA+GGG | 0.564114 | 4.2:-32006344 | MS.gene065890:CDS |
| GGCTTAGGAGTAGAATTGAA+AGG | 0.565800 | 4.2:-32007589 | MS.gene065890:CDS |
| TTTAATATTCCAGGGAGTGG+AGG | 0.566833 | 4.2:+32006240 | None:intergenic |
| TTTGAGAGCAGCGTTATCAC+CGG | 0.570401 | 4.2:+32009934 | None:intergenic |
| CAGACCACGGGGACAGCCGC+CGG | 0.573222 | 4.2:-32009953 | MS.gene065890:CDS |
| AAGGAAAGCAGCCTATCTGC+AGG | 0.574961 | 4.2:-32007570 | MS.gene065890:CDS |
| AATATTGCGGATGGAGGGGA+AGG | 0.575401 | 4.2:-32006339 | MS.gene065890:CDS |
| TTCTTCAATATCACTCAGAC+TGG | 0.575701 | 4.2:+32007731 | None:intergenic |
| CCAGGGAGTGGAGGTGATGT+CGG | 0.580031 | 4.2:+32006249 | None:intergenic |
| ACACAATATTGCGGATGGAG+GGG | 0.585147 | 4.2:-32006343 | MS.gene065890:CDS |
| GTGCCGGGTTACCATCTAGC+CGG | 0.591553 | 4.2:-32009982 | MS.gene065890:CDS |
| TCCCCGTGGTCTGCTCACTC+CGG | 0.599110 | 4.2:+32009963 | None:intergenic |
| ACACACAATATTGCGGATGG+AGG | 0.602906 | 4.2:-32006345 | MS.gene065890:CDS |
| GAAGAGGATGAGGAATTGAT+GGG | 0.607086 | 4.2:-32010049 | MS.gene065890:CDS |
| TGACGACAATTATGTTCTCA+AGG | 0.607641 | 4.2:-32006412 | MS.gene065890:CDS |
| TCCACTTCCACAGTTGCATG+AGG | 0.608745 | 4.2:+32006767 | None:intergenic |
| GTTACACACAATATTGCGGA+TGG | 0.615879 | 4.2:-32006348 | MS.gene065890:CDS |
| TAGCCGGAGTGAGCAGACCA+CGG | 0.622633 | 4.2:-32009966 | MS.gene065890:CDS |
| TCAATCGTCCGTGGACGAAG+AGG | 0.627914 | 4.2:-32010065 | MS.gene065890:CDS |
| GGGAGTGGAGGTGATGTCGG+AGG | 0.628434 | 4.2:+32006252 | None:intergenic |
| CAATGTTACACACAATATTG+CGG | 0.641067 | 4.2:-32006352 | MS.gene065890:CDS |
| TCAGGAAATCCTCCCAGTGG+AGG | 0.644133 | 4.2:-32007329 | MS.gene065890:CDS |
| GACACGTCCTCATGCAACTG+TGG | 0.649899 | 4.2:-32006774 | MS.gene065890:CDS |
| TGTGTAACATTGTCACTCTG+TGG | 0.651492 | 4.2:+32006363 | None:intergenic |
| ATCACCGGCGGCTGTCCCCG+TGG | 0.656058 | 4.2:+32009949 | None:intergenic |
| AGGAAGAACAACTTACAATG+AGG | 0.663086 | 4.2:-32008500 | MS.gene065890:intron |
| GAGCATCATAGACCCTTCGA+CGG | 0.678223 | 4.2:+32007826 | None:intergenic |
| GGTAAAGATACACCTCCACT+GGG | 0.679973 | 4.2:+32007317 | None:intergenic |
| AGCTCAGGAAATCCTCCCAG+TGG | 0.682103 | 4.2:-32007332 | MS.gene065890:CDS |
| GCAGCCGCATCAATCGTCCG+TGG | 0.683605 | 4.2:-32010074 | MS.gene065890:CDS |
| AGATAAGAAAACCTGATCAG+GGG | 0.686331 | 4.2:+32007966 | None:intergenic |
| ATAGGTGGCAGATGAACTTG+TGG | 0.689893 | 4.2:-32008022 | MS.gene065890:intron |
| AACATGTTTGAAACTGACTG+AGG | 0.695881 | 4.2:+32006282 | None:intergenic |
| TCGTCCACGGACGATTGATG+CGG | 0.696336 | 4.2:+32010070 | None:intergenic |
| GAGAGCAGCGTTATCACCGG+CGG | 0.697043 | 4.2:+32009937 | None:intergenic |
| ACTCCGGCTAGATGGTAACC+CGG | 0.712354 | 4.2:+32009979 | None:intergenic |
| GGGGTGATAAGAATGGAAGA+GGG | 0.716134 | 4.2:-32009054 | MS.gene065890:CDS |
| AAAGATACACCTCCACTGGG+AGG | 0.724160 | 4.2:+32007320 | None:intergenic |
| ATATCACTCAGACTGGTACG+AGG | 0.734989 | 4.2:+32007738 | None:intergenic |
| GCCGGAGTGAGCAGACCACG+GGG | 0.739516 | 4.2:-32009964 | MS.gene065890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAAAATAAAAATTT+AGG | + | chr4.2:32008245-32008264 | None:intergenic | 0.0% |
| !!! | TTTTTTTAAAAAAAAAATAT+AGG | - | chr4.2:32008257-32008276 | MS.gene065890:intron | 0.0% |
| !! | AAATAAAAATTTAGGAAATA+AGG | + | chr4.2:32008237-32008256 | None:intergenic | 10.0% |
| !! | AAGTATAGATATAAATAAAA+AGG | + | chr4.2:32007102-32007121 | None:intergenic | 10.0% |
| !! | GAAAAAAAATATAAGTAATA+CGG | + | chr4.2:32008200-32008219 | None:intergenic | 10.0% |
| !!! | TTTTAAAAAAAAAATATAGG+TGG | - | chr4.2:32008260-32008279 | MS.gene065890:intron | 10.0% |
| !! | AAATTAATTAGTGGTTAATT+TGG | - | chr4.2:32006959-32006978 | MS.gene065890:intron | 15.0% |
| !! | CTATTTAAAAAACTAATTGA+AGG | + | chr4.2:32008048-32008067 | None:intergenic | 15.0% |
| !! | TTATTTATATCTATACTTTG+TGG | - | chr4.2:32007104-32007123 | MS.gene065890:intron | 15.0% |
| !!! | AAATAATTTTCCCTTTTTTT+GGG | - | chr4.2:32009242-32009261 | MS.gene065890:intron | 15.0% |
| !!! | ATCTTATGAACTTATTTTTT+TGG | - | chr4.2:32008406-32008425 | MS.gene065890:intron | 15.0% |
| !!! | CTTCAATTAGTTTTTTAAAT+AGG | - | chr4.2:32008046-32008065 | MS.gene065890:intron | 15.0% |
| !!! | TCTTATGAACTTATTTTTTT+GGG | - | chr4.2:32008407-32008426 | MS.gene065890:intron | 15.0% |
| !! | AAAAAAGAAATACAATGGAA+GGG | - | chr4.2:32008532-32008551 | MS.gene065890:intron | 20.0% |
| !! | AAATCAACAATAAATTAGAG+AGG | + | chr4.2:32007748-32007767 | None:intergenic | 20.0% |
| !! | AATCAACAATAAATTAGAGA+GGG | + | chr4.2:32007747-32007766 | None:intergenic | 20.0% |
| !! | AATTAACCACTAATTAATTC+AGG | + | chr4.2:32006858-32006877 | None:intergenic | 20.0% |
| !! | AATTTAAAAAATAGCAATCC+AGG | + | chr4.2:32008810-32008829 | None:intergenic | 20.0% |
| !! | AGGATAAAAAAGAAATACAA+TGG | - | chr4.2:32008527-32008546 | MS.gene065890:intron | 20.0% |
| !! | ATGTAATATATTATCATCCA+AGG | + | chr4.2:32009091-32009110 | None:intergenic | 20.0% |
| !! | GAATTAATTAGTGGTTAATT+TGG | - | chr4.2:32006858-32006877 | MS.gene065890:intron | 20.0% |
| !! | TAAAAAAGAAATACAATGGA+AGG | - | chr4.2:32008531-32008550 | MS.gene065890:intron | 20.0% |
| !! | TAAAAAGTTAAAGATCAAAG+TGG | + | chr4.2:32007313-32007332 | None:intergenic | 20.0% |
| !! | TAAGAATCAATCGAAAATAA+TGG | + | chr4.2:32007174-32007193 | None:intergenic | 20.0% |
| !! | TTAAAACCTGAATTAATTAG+TGG | - | chr4.2:32006849-32006868 | MS.gene065890:intron | 20.0% |
| !! | TTCATTGCAAAATTAATTAG+TGG | - | chr4.2:32006950-32006969 | MS.gene065890:intron | 20.0% |
| !! | TTCTATAAATACATACATGT+TGG | - | chr4.2:32007970-32007989 | MS.gene065890:intron | 20.0% |
| !! | TTTATTCAAGGTCTAAAAAA+TGG | - | chr4.2:32006694-32006713 | MS.gene065890:intron | 20.0% |
| !!! | AAAAAACTGGTTTAAAGTAA+AGG | + | chr4.2:32007828-32007847 | None:intergenic | 20.0% |
| !!! | AAGATTTTCAATTAGTGAAA+AGG | - | chr4.2:32006619-32006638 | MS.gene065890:intron | 20.0% |
| !!! | CTTATGAACTTATTTTTTTG+GGG | - | chr4.2:32008408-32008427 | MS.gene065890:intron | 20.0% |
| !!! | GAAATAATTTTCCCTTTTTT+TGG | - | chr4.2:32009241-32009260 | MS.gene065890:intron | 20.0% |
| !!! | TATTTGCTATTTACACATTA+AGG | - | chr4.2:32008373-32008392 | MS.gene065890:intron | 20.0% |
| !!! | TTGTATTTCTTTTTTATCCT+TGG | + | chr4.2:32008527-32008546 | None:intergenic | 20.0% |
| !!! | TTGTTCATTTTGATTTCAAT+AGG | - | chr4.2:32009573-32009592 | MS.gene065890:intron | 20.0% |
| ! | AATAAAAACAGAGAATTGAC+AGG | + | chr4.2:32007140-32007159 | None:intergenic | 25.0% |
| ! | AATGAACAATTATATAGCTC+AGG | - | chr4.2:32008950-32008969 | MS.gene065890:intron | 25.0% |
| ! | AATTGAACAACAATTTCTAC+TGG | + | chr4.2:32009065-32009084 | None:intergenic | 25.0% |
| ! | ACTTGTAGCAATAATAAAAG+CGG | + | chr4.2:32008901-32008920 | None:intergenic | 25.0% |
| ! | AGAGAGTAAACATAAATAAG+TGG | + | chr4.2:32009841-32009860 | None:intergenic | 25.0% |
| ! | ATAACATAGACCCATAAAAT+AGG | + | chr4.2:32009359-32009378 | None:intergenic | 25.0% |
| ! | ATATTGAAGAACTAAAGGTT+TGG | - | chr4.2:32008578-32008597 | MS.gene065890:intron | 25.0% |
| ! | ATCAACAATAAATTAGAGAG+GGG | + | chr4.2:32007746-32007765 | None:intergenic | 25.0% |
| ! | ATTGTTCATTTCGTTGAATA+AGG | + | chr4.2:32008940-32008959 | None:intergenic | 25.0% |
| ! | CTTTATGATACCACAAAATT+AGG | + | chr4.2:32009684-32009703 | None:intergenic | 25.0% |
| ! | GATAAATCACAACATGAAAT+GGG | + | chr4.2:32008171-32008190 | None:intergenic | 25.0% |
| ! | GGTATTAAATCAATTAGAGT+GGG | + | chr4.2:32008777-32008796 | None:intergenic | 25.0% |
| ! | GTAGAGAAAATTGTCAAAAA+TGG | + | chr4.2:32007710-32007729 | None:intergenic | 25.0% |
| ! | TAAACATTTGTGTAAAGGTT+TGG | - | chr4.2:32007404-32007423 | MS.gene065890:intron | 25.0% |
| ! | TAGTATATAGCAGTAACTTT+CGG | + | chr4.2:32009289-32009308 | None:intergenic | 25.0% |
| ! | TATAAATCCGATTTCATGTT+TGG | - | chr4.2:32006512-32006531 | MS.gene065890:intron | 25.0% |
| ! | TATTATTGCTACAAGTTTGT+AGG | - | chr4.2:32008905-32008924 | MS.gene065890:intron | 25.0% |
| ! | TGAAAAGGAAAATGATATAC+TGG | - | chr4.2:32006634-32006653 | MS.gene065890:intron | 25.0% |
| ! | TGACATAAACATTTGTGTAA+AGG | - | chr4.2:32007399-32007418 | MS.gene065890:intron | 25.0% |
| ! | TGATAAATCACAACATGAAA+TGG | + | chr4.2:32008172-32008191 | None:intergenic | 25.0% |
| ! | TGGATAAAATGACCAAAAAA+AGG | + | chr4.2:32009045-32009064 | None:intergenic | 25.0% |
| !! | ATTTTATGGGTCTATGTTAT+GGG | - | chr4.2:32009359-32009378 | MS.gene065890:intron | 25.0% |
| !! | CAAATAAGTTGTTTCAAACA+AGG | + | chr4.2:32007373-32007392 | None:intergenic | 25.0% |
| !! | CACTCTAATTGATTTAATAC+CGG | - | chr4.2:32008776-32008795 | MS.gene065890:intron | 25.0% |
| !! | TATTTTATGGGTCTATGTTA+TGG | - | chr4.2:32009358-32009377 | MS.gene065890:intron | 25.0% |
| !! | TGTATCTTTACCTTTTATTC+TGG | - | chr4.2:32008991-32009010 | MS.gene065890:intron | 25.0% |
| !!! | AATAAAAAGGTTTTGAATCG+TGG | + | chr4.2:32007089-32007108 | None:intergenic | 25.0% |
| !!! | AGACTTTATATTTTAGAACG+TGG | + | chr4.2:32007928-32007947 | None:intergenic | 25.0% |
| !!! | ATGCGTTCAATTTTGATTTA+GGG | - | chr4.2:32006584-32006603 | MS.gene065890:intron | 25.0% |
| !!! | ATTTTCAAGTAGATAAGTCT+TGG | - | chr4.2:32009762-32009781 | MS.gene065890:intron | 25.0% |
| !!! | GACAGAGATTTATTTTATTC+AGG | - | chr4.2:32007684-32007703 | MS.gene065890:intron | 25.0% |
| !!! | TGACAATTTTCTCTACTTTT+TGG | - | chr4.2:32007714-32007733 | MS.gene065890:intron | 25.0% |
| !!! | TTTTCAAGTAGATAAGTCTT+GGG | - | chr4.2:32009763-32009782 | MS.gene065890:intron | 25.0% |
| AACATAGTGAACAAACGTTA+TGG | - | chr4.2:32006747-32006766 | MS.gene065890:CDS | 30.0% | |
| AACCTTTCATACTAAATTGC+CGG | + | chr4.2:32007271-32007290 | None:intergenic | 30.0% | |
| AAGATAAGAAAACCTGATCA+GGG | + | chr4.2:32008335-32008354 | None:intergenic | 30.0% | |
| AATCAAATATCAGCACCAAT+AGG | + | chr4.2:32009479-32009498 | None:intergenic | 30.0% | |
| AGCTAAACCAAACATGAAAT+CGG | + | chr4.2:32006522-32006541 | None:intergenic | 30.0% | |
| AGGAAGTCTAAACATTAAGA+CGG | + | chr4.2:32009664-32009683 | None:intergenic | 30.0% | |
| AGTTACTGCTATATACTAGA+TGG | - | chr4.2:32009291-32009310 | MS.gene065890:intron | 30.0% | |
| ATTACATGAACTTAAGTAGC+TGG | - | chr4.2:32009135-32009154 | MS.gene065890:intron | 30.0% | |
| CAATGTTACACACAATATTG+CGG | - | chr4.2:32009945-32009964 | MS.gene065890:CDS | 30.0% | |
| CAGTTTCAAACATGTTAGTT+AGG | - | chr4.2:32010022-32010041 | MS.gene065890:CDS | 30.0% | |
| CCTTGAATAAAATGTACCAT+TGG | + | chr4.2:32006685-32006704 | None:intergenic | 30.0% | |
| CGGTATTAAATCAATTAGAG+TGG | + | chr4.2:32008778-32008797 | None:intergenic | 30.0% | |
| GAGTGATATTGAAGAACTAA+AGG | - | chr4.2:32008573-32008592 | MS.gene065890:intron | 30.0% | |
| GGCTATGAATATTATTTCCA+AGG | - | chr4.2:32008507-32008526 | MS.gene065890:CDS | 30.0% | |
| GTCTATGTTATGGGTTTATA+TGG | - | chr4.2:32009368-32009387 | MS.gene065890:intron | 30.0% | |
| TATACCTGAACCAGAATAAA+AGG | + | chr4.2:32009004-32009023 | None:intergenic | 30.0% | |
| TCTAAAAAATGGTCCGTTAT+AGG | - | chr4.2:32006705-32006724 | MS.gene065890:intron | 30.0% | |
| TTGTTCTATACCAATTACCA+TGG | + | chr4.2:32006779-32006798 | None:intergenic | 30.0% | |
| ! | ATTGTTGTTCAATTATGCCT+TGG | - | chr4.2:32009071-32009090 | MS.gene065890:CDS | 30.0% |
| ! | ATTTCATGTTTGGTTTAGCT+TGG | - | chr4.2:32006522-32006541 | MS.gene065890:intron | 30.0% |
| ! | CAGATAAATTTTCCAACACA+GGG | + | chr4.2:32009818-32009837 | None:intergenic | 30.0% |
| ! | CCAATGGTACATTTTATTCA+AGG | - | chr4.2:32006682-32006701 | MS.gene065890:intron | 30.0% |
| ! | CTTTTAACGTGGTAAAAAAC+TGG | + | chr4.2:32007841-32007860 | None:intergenic | 30.0% |
| ! | GCAATGAATTTTTCATAGAC+TGG | + | chr4.2:32006938-32006957 | None:intergenic | 30.0% |
| ! | GTTTAGACTTCCTAATTTTG+TGG | - | chr4.2:32009671-32009690 | MS.gene065890:intron | 30.0% |
| ! | GTTTTGTCAATGATTAAGCA+CGG | - | chr4.2:32008068-32008087 | MS.gene065890:intron | 30.0% |
| ! | TAATTATTAGCCTCAGAAAC+TGG | - | chr4.2:32008119-32008138 | MS.gene065890:intron | 30.0% |
| ! | TTTCATGTTTGGTTTAGCTT+GGG | - | chr4.2:32006523-32006542 | MS.gene065890:intron | 30.0% |
| ! | TTTTGTGGTATCATAAAGTC+CGG | - | chr4.2:32009686-32009705 | MS.gene065890:intron | 30.0% |
| !! | GTTATGATGTGATTAGCTTT+AGG | - | chr4.2:32009630-32009649 | MS.gene065890:intron | 30.0% |
| !!! | CATGCGTTCAATTTTGATTT+AGG | - | chr4.2:32006583-32006602 | MS.gene065890:intron | 30.0% |
| !!! | TTTACCTTTTATTCTGGTTC+AGG | - | chr4.2:32008997-32009016 | MS.gene065890:intron | 30.0% |
| AATCACAACATGAAATGGGT+AGG | + | chr4.2:32008167-32008186 | None:intergenic | 35.0% | |
| ACTCTTGCCTTTAATATTCC+AGG | + | chr4.2:32010069-32010088 | None:intergenic | 35.0% | |
| AGAGTTTATGCATAAGCTCT+TGG | - | chr4.2:32007535-32007554 | MS.gene065890:intron | 35.0% | |
| AGATAAGAAAACCTGATCAG+GGG | + | chr4.2:32008334-32008353 | None:intergenic | 35.0% | |
| AGGAAGAACAACTTACAATG+AGG | - | chr4.2:32007797-32007816 | MS.gene065890:CDS | 35.0% | |
| ATTAAATAGACACAGCGTCT+TGG | - | chr4.2:32008686-32008705 | MS.gene065890:intron | 35.0% | |
| ATTGGAAGTAATGTATAGCC+AGG | + | chr4.2:32006667-32006686 | None:intergenic | 35.0% | |
| CAAACGAATGCCCAAAAAAA+GGG | + | chr4.2:32009255-32009274 | None:intergenic | 35.0% | |
| CAATTATGTTCTCAAGGCAA+TGG | - | chr4.2:32009891-32009910 | MS.gene065890:CDS | 35.0% | |
| CGCTATAGCATTTATTGAGT+TGG | + | chr4.2:32007899-32007918 | None:intergenic | 35.0% | |
| CTCTTGCCTTTAATATTCCA+GGG | + | chr4.2:32010068-32010087 | None:intergenic | 35.0% | |
| GAAAATAGATCTTATCCAGC+TGG | - | chr4.2:32009203-32009222 | MS.gene065890:intron | 35.0% | |
| GAAACTAGTGTATCCTATTG+TGG | - | chr4.2:32009715-32009734 | MS.gene065890:intron | 35.0% | |
| GAACAACTTACAATGAGGTT+AGG | - | chr4.2:32007802-32007821 | MS.gene065890:CDS | 35.0% | |
| GAAGATAAGAAAACCTGATC+AGG | + | chr4.2:32008336-32008355 | None:intergenic | 35.0% | |
| GAATAATATGCTCATCCTGT+TGG | - | chr4.2:32009437-32009456 | MS.gene065890:intron | 35.0% | |
| GTACTGCATAAACATTGAGT+GGG | + | chr4.2:32007197-32007216 | None:intergenic | 35.0% | |
| GTATCAGACACTACCTATAA+CGG | + | chr4.2:32006721-32006740 | None:intergenic | 35.0% | |
| GTTATAGGTAGTGTCTGATA+CGG | - | chr4.2:32006720-32006739 | MS.gene065890:intron | 35.0% | |
| TAGTTAATTCACTAACCAGC+TGG | + | chr4.2:32009221-32009240 | None:intergenic | 35.0% | |
| TGACGACAATTATGTTCTCA+AGG | - | chr4.2:32009885-32009904 | MS.gene065890:CDS | 35.0% | |
| TGGCTATACATTACTTCCAA+TGG | - | chr4.2:32006666-32006685 | MS.gene065890:intron | 35.0% | |
| TGTGAGAAGGTAGAAAGTAA+AGG | - | chr4.2:32007777-32007796 | MS.gene065890:CDS | 35.0% | |
| TTAAATAGACACAGCGTCTT+GGG | - | chr4.2:32008687-32008706 | MS.gene065890:intron | 35.0% | |
| TTAAATCAATTAGAGTGGGC+TGG | + | chr4.2:32008773-32008792 | None:intergenic | 35.0% | |
| TTAGATCAGAACATCACTGA+AGG | + | chr4.2:32008648-32008667 | None:intergenic | 35.0% | |
| TTCTTCAATATCACTCAGAC+TGG | + | chr4.2:32008569-32008588 | None:intergenic | 35.0% | |
| TTTCATGACTTTGGCTGTTA+CGG | + | chr4.2:32007054-32007073 | None:intergenic | 35.0% | |
| ! | AAAAGTACAGTTCTCGATCA+TGG | - | chr4.2:32007856-32007875 | MS.gene065890:intron | 35.0% |
| ! | AACATGTTTGAAACTGACTG+AGG | + | chr4.2:32010018-32010037 | None:intergenic | 35.0% |
| ! | AATCTAGAAAGTGCAGAGAT+TGG | + | chr4.2:32006453-32006472 | None:intergenic | 35.0% |
| ! | ACTCTGGTTGCCTATTTTAT+GGG | - | chr4.2:32009346-32009365 | MS.gene065890:intron | 35.0% |
| ! | ATACACTAGTTTCCACTTTC+CGG | + | chr4.2:32009708-32009727 | None:intergenic | 35.0% |
| ! | GAATTTTCTGATCCAAGCAA+TGG | - | chr4.2:32008300-32008319 | MS.gene065890:intron | 35.0% |
| ! | GCAGATAAATTTTCCAACAC+AGG | + | chr4.2:32009819-32009838 | None:intergenic | 35.0% |
| ! | TACTCTGGTTGCCTATTTTA+TGG | - | chr4.2:32009345-32009364 | MS.gene065890:intron | 35.0% |
| ! | TCTGAGGCTAATAATTACCA+CGG | + | chr4.2:32008116-32008135 | None:intergenic | 35.0% |
| ! | TGATGCTCTGAATGTTCTTA+TGG | - | chr4.2:32008486-32008505 | MS.gene065890:intron | 35.0% |
| ! | TTGTTTAGTTCAGCTTACTC+TGG | - | chr4.2:32009330-32009349 | MS.gene065890:intron | 35.0% |
| !!! | ATTAAGCACGGTGGTTTTTT+GGG | - | chr4.2:32008080-32008099 | MS.gene065890:intron | 35.0% |
| !!! | TCTCAGTATCTGCCTTTTTT+TGG | - | chr4.2:32009030-32009049 | MS.gene065890:intron | 35.0% |
| AAAGGCAGATACTGAGATGA+TGG | + | chr4.2:32009027-32009046 | None:intergenic | 40.0% | |
| AACTCAGACAATGACAAGCA+AGG | + | chr4.2:32009613-32009632 | None:intergenic | 40.0% | |
| AATTGTGAAACTTGCAGCAG+TGG | - | chr4.2:32007646-32007665 | MS.gene065890:intron | 40.0% | |
| ACTCAGCATTCAGCATACTA+AGG | + | chr4.2:32007615-32007634 | None:intergenic | 40.0% | |
| AGGATAAGTGCAACTTTGCA+AGG | + | chr4.2:32007353-32007372 | None:intergenic | 40.0% | |
| ATAAGTCTTGGGAGCTAGTT+AGG | - | chr4.2:32009774-32009793 | MS.gene065890:intron | 40.0% | |
| ATATGGAGAATTCCTGGTCA+TGG | - | chr4.2:32009385-32009404 | MS.gene065890:intron | 40.0% | |
| ATGAACTTAAGTAGCTGGCT+TGG | - | chr4.2:32009140-32009159 | MS.gene065890:intron | 40.0% | |
| ATGAGAAAAACATCCGTCGA+AGG | - | chr4.2:32008458-32008477 | MS.gene065890:intron | 40.0% | |
| CCAAACGAATGCCCAAAAAA+AGG | + | chr4.2:32009256-32009275 | None:intergenic | 40.0% | |
| CGCTAAGGATTTCATGACTT+TGG | + | chr4.2:32007063-32007082 | None:intergenic | 40.0% | |
| CTCAGCATTCAGCATACTAA+GGG | + | chr4.2:32007614-32007633 | None:intergenic | 40.0% | |
| CTCCGGCAATTTAGTATGAA+AGG | - | chr4.2:32007266-32007285 | MS.gene065890:intron | 40.0% | |
| GAAGAGGATGAGGAATTGAT+GGG | - | chr4.2:32006248-32006267 | MS.gene065890:CDS | 40.0% | |
| GGCTTAGGAGTAGAATTGAA+AGG | - | chr4.2:32008708-32008727 | MS.gene065890:intron | 40.0% | |
| GGGTTTATATGGAGAATTCC+TGG | - | chr4.2:32009379-32009398 | MS.gene065890:intron | 40.0% | |
| GGTACTGCATAAACATTGAG+TGG | + | chr4.2:32007198-32007217 | None:intergenic | 40.0% | |
| GTACCAAGAAGAAAAAGCGA+CGG | - | chr4.2:32007213-32007232 | MS.gene065890:intron | 40.0% | |
| GTATCATAAAGTCCGGAAAG+TGG | - | chr4.2:32009693-32009712 | MS.gene065890:intron | 40.0% | |
| GTGAACAAACGTTATGGAAG+CGG | - | chr4.2:32006753-32006772 | MS.gene065890:CDS | 40.0% | |
| GTTACACACAATATTGCGGA+TGG | - | chr4.2:32009949-32009968 | MS.gene065890:CDS | 40.0% | |
| TAAGTCTTGGGAGCTAGTTA+GGG | - | chr4.2:32009775-32009794 | MS.gene065890:intron | 40.0% | |
| TACCAAGAAGAAAAAGCGAC+GGG | - | chr4.2:32007214-32007233 | MS.gene065890:intron | 40.0% | |
| TCAGCATTCAGCATACTAAG+GGG | + | chr4.2:32007613-32007632 | None:intergenic | 40.0% | |
| TCCACTCCCTGGAATATTAA+AGG | - | chr4.2:32010059-32010078 | MS.gene065890:CDS | 40.0% | |
| TCCTATTGTGGTCAAACACT+CGG | - | chr4.2:32009727-32009746 | MS.gene065890:intron | 40.0% | |
| TGAGAAAAACATCCGTCGAA+GGG | - | chr4.2:32008459-32008478 | MS.gene065890:intron | 40.0% | |
| TGATATACTGGACTTGAACC+TGG | - | chr4.2:32006646-32006665 | MS.gene065890:intron | 40.0% | |
| TGTGTAACATTGTCACTCTG+TGG | + | chr4.2:32009937-32009956 | None:intergenic | 40.0% | |
| TTAATACCGGAATGCTAACC+TGG | - | chr4.2:32008789-32008808 | MS.gene065890:intron | 40.0% | |
| TTGTCAATGATTAAGCACGG+TGG | - | chr4.2:32008071-32008090 | MS.gene065890:intron | 40.0% | |
| TTTAATATTCCAGGGAGTGG+AGG | + | chr4.2:32010060-32010079 | None:intergenic | 40.0% | |
| ! | ATTTTCTGCAGTGTGTGAGA+AGG | - | chr4.2:32007764-32007783 | MS.gene065890:CDS | 40.0% |
| ! | CGAGAACTGTACTTTTAACG+TGG | + | chr4.2:32007852-32007871 | None:intergenic | 40.0% |
| ! | TTTTCTGATCCAAGCAATGG+TGG | - | chr4.2:32008303-32008322 | MS.gene065890:intron | 40.0% |
| !! | ACTTTCTAAGATCCATGACC+AGG | + | chr4.2:32009400-32009419 | None:intergenic | 40.0% |
| !! | GTTCTCAAGGCAATGGATTT+TGG | - | chr4.2:32009898-32009917 | MS.gene065890:CDS | 40.0% |
| !! | TCAAGGCAATGGATTTTGGT+GGG | - | chr4.2:32009902-32009921 | MS.gene065890:CDS | 40.0% |
| !! | TTTAGCTTGGGATGAGATTC+TGG | - | chr4.2:32006535-32006554 | MS.gene065890:intron | 40.0% |
| !!! | CCTTTTTTTGGGCATTCGTT+TGG | - | chr4.2:32009253-32009272 | MS.gene065890:intron | 40.0% |
| !!! | GATTAAGCACGGTGGTTTTT+TGG | - | chr4.2:32008079-32008098 | MS.gene065890:intron | 40.0% |
| AAGTCCACTACCAGTTTCTG+AGG | + | chr4.2:32008132-32008151 | None:intergenic | 45.0% | |
| ACAACATGAAATGGGTAGGC+AGG | + | chr4.2:32008163-32008182 | None:intergenic | 45.0% | |
| ACACAATATTGCGGATGGAG+GGG | - | chr4.2:32009954-32009973 | MS.gene065890:CDS | 45.0% | |
| ACACACAATATTGCGGATGG+AGG | - | chr4.2:32009952-32009971 | MS.gene065890:CDS | 45.0% | |
| AGCAATCCAGGTTAGCATTC+CGG | + | chr4.2:32008798-32008817 | None:intergenic | 45.0% | |
| AGGTAAAGATACACCTCCAC+TGG | + | chr4.2:32008984-32009003 | None:intergenic | 45.0% | |
| ATAAGAATGGAAGAGGGCTC+CGG | - | chr4.2:32007249-32007268 | MS.gene065890:intron | 45.0% | |
| ATAGGTGGCAGATGAACTTG+TGG | - | chr4.2:32008275-32008294 | MS.gene065890:intron | 45.0% | |
| ATATCACTCAGACTGGTACG+AGG | + | chr4.2:32008562-32008581 | None:intergenic | 45.0% | |
| CACACAATATTGCGGATGGA+GGG | - | chr4.2:32009953-32009972 | MS.gene065890:CDS | 45.0% | |
| CGAAGAGGATGAGGAATTGA+TGG | - | chr4.2:32006247-32006266 | MS.gene065890:CDS | 45.0% | |
| CTCGATCATGGATAGCAAAG+CGG | - | chr4.2:32007868-32007887 | MS.gene065890:intron | 45.0% | |
| CTGTTACGGATGTTGCGTTA+TGG | + | chr4.2:32007040-32007059 | None:intergenic | 45.0% | |
| GCCTTTAATATTCCAGGGAG+TGG | + | chr4.2:32010063-32010082 | None:intergenic | 45.0% | |
| GGGGTGATAAGAATGGAAGA+GGG | - | chr4.2:32007243-32007262 | MS.gene065890:intron | 45.0% | |
| GGTAAAGATACACCTCCACT+GGG | + | chr4.2:32008983-32009002 | None:intergenic | 45.0% | |
| GTCAGGCATGTATCAATCAC+AGG | - | chr4.2:32009990-32010009 | MS.gene065890:CDS | 45.0% | |
| TCCGAGTGTTTGACCACAAT+AGG | + | chr4.2:32009731-32009750 | None:intergenic | 45.0% | |
| TGCTTCGATAAGCTCTTGTG+AGG | + | chr4.2:32007467-32007486 | None:intergenic | 45.0% | |
| TTAGCCTCAGAAACTGGTAG+TGG | - | chr4.2:32008125-32008144 | MS.gene065890:intron | 45.0% | |
| TTTGAGAGCAGCGTTATCAC+CGG | + | chr4.2:32006366-32006385 | None:intergenic | 45.0% | |
| ! | CTGTATCTTTTCTCTCTGCG+TGG | - | chr4.2:32008611-32008630 | MS.gene065890:intron | 45.0% |
| ! | GGATGTTGCGTTATGGATTG+TGG | + | chr4.2:32007033-32007052 | None:intergenic | 45.0% |
| ! | GTTATGGATTGTGGTCGTTG+CGG | + | chr4.2:32007024-32007043 | None:intergenic | 45.0% |
| !! | AAGGCAATGGATTTTGGTGG+GGG | - | chr4.2:32009904-32009923 | MS.gene065890:CDS | 45.0% |
| !! | CAAGGCAATGGATTTTGGTG+GGG | - | chr4.2:32009903-32009922 | MS.gene065890:CDS | 45.0% |
| !! | CTCAAGGCAATGGATTTTGG+TGG | - | chr4.2:32009901-32009920 | MS.gene065890:CDS | 45.0% |
| !! | GATGAGGAATTGATGGGTTG+CGG | - | chr4.2:32006254-32006273 | MS.gene065890:CDS | 45.0% |
| !!! | TTTTGGGATCAAGTTGTCCG+TGG | - | chr4.2:32008096-32008115 | MS.gene065890:intron | 45.0% |
| !!! | TTTAATCAAATTTATATTTT+TGG | + | chr4.2:32008672-32008691 | None:intergenic | 5.0% |
| AAACGTTATGGAAGCGGCCA+TGG | - | chr4.2:32006759-32006778 | MS.gene065890:CDS | 50.0% | |
| AAAGATACACCTCCACTGGG+AGG | + | chr4.2:32008980-32008999 | None:intergenic | 50.0% | |
| AAGGAAAGCAGCCTATCTGC+AGG | - | chr4.2:32008727-32008746 | MS.gene065890:intron | 50.0% | |
| AATATTGCGGATGGAGGGGA+AGG | - | chr4.2:32009958-32009977 | MS.gene065890:CDS | 50.0% | |
| ACTACGATTTCCGGCCAATC+AGG | - | chr4.2:32006278-32006297 | MS.gene065890:CDS | 50.0% | |
| ATGGAAGCGGCCATGGTAAT+TGG | - | chr4.2:32006766-32006785 | MS.gene065890:CDS | 50.0% | |
| GAGCATCATAGACCCTTCGA+CGG | + | chr4.2:32008474-32008493 | None:intergenic | 50.0% | |
| GCTGTTGGGGGTGATAAGAA+TGG | - | chr4.2:32007236-32007255 | MS.gene065890:intron | 50.0% | |
| GGGGGTGATAAGAATGGAAG+AGG | - | chr4.2:32007242-32007261 | MS.gene065890:intron | 50.0% | |
| GGTTGCGGAACTACGATTTC+CGG | - | chr4.2:32006269-32006288 | MS.gene065890:CDS | 50.0% | |
| TCCACTTCCACAGTTGCATG+AGG | + | chr4.2:32009533-32009552 | None:intergenic | 50.0% | |
| TCCTCATGCAACTGTGGAAG+TGG | - | chr4.2:32009529-32009548 | MS.gene065890:intron | 50.0% | |
| TGCTGTGATGTGGCTCCTAT+TGG | - | chr4.2:32009461-32009480 | MS.gene065890:intron | 50.0% | |
| TTCCTCATCCTCTTCGTCCA+CGG | + | chr4.2:32006243-32006262 | None:intergenic | 50.0% | |
| TTGTCGTCATGCAGCTCGAA+AGG | + | chr4.2:32009874-32009893 | None:intergenic | 50.0% | |
| TTTGAATCGTGGTCGCGCTA+AGG | + | chr4.2:32007078-32007097 | None:intergenic | 50.0% | |
| ! | TGGTGCTTTTGTCCCTGTGT+TGG | - | chr4.2:32009803-32009822 | MS.gene065890:intron | 50.0% |
| !! | AAGAAAAAGCGACGGGCTGT+TGG | - | chr4.2:32007221-32007240 | MS.gene065890:intron | 50.0% |
| !! | AGAAAAAGCGACGGGCTGTT+GGG | - | chr4.2:32007222-32007241 | MS.gene065890:intron | 50.0% |
| !!! | AGCCCGTCGCTTTTTCTTCT+TGG | + | chr4.2:32007219-32007238 | None:intergenic | 50.0% |
| ACTCCGGCTAGATGGTAACC+CGG | + | chr4.2:32006321-32006340 | None:intergenic | 55.0% | |
| AGACACAGCGTCTTGGGCTT+AGG | - | chr4.2:32008693-32008712 | MS.gene065890:intron | 55.0% | |
| AGACTCACGCAACTACTGCC+TGG | + | chr4.2:32006427-32006446 | None:intergenic | 55.0% | |
| AGCTCAGGAAATCCTCCCAG+TGG | - | chr4.2:32008965-32008984 | MS.gene065890:intron | 55.0% | |
| CATGAAATGGGTAGGCAGGC+AGG | + | chr4.2:32008159-32008178 | None:intergenic | 55.0% | |
| CTGCTCAAGCTCCTGCAGAT+AGG | + | chr4.2:32008741-32008760 | None:intergenic | 55.0% | |
| GACACGTCCTCATGCAACTG+TGG | - | chr4.2:32009523-32009542 | MS.gene065890:intron | 55.0% | |
| GACTCACGCAACTACTGCCT+GGG | + | chr4.2:32006426-32006445 | None:intergenic | 55.0% | |
| GGGGACAAACCACCATTGCT+TGG | + | chr4.2:32008315-32008334 | None:intergenic | 55.0% | |
| GTCTTGGGAGCTAGTTAGGG+TGG | - | chr4.2:32009778-32009797 | MS.gene065890:intron | 55.0% | |
| TCAATCGTCCGTGGACGAAG+AGG | - | chr4.2:32006232-32006251 | MS.gene065890:CDS | 55.0% | |
| TCAGGAAATCCTCCCAGTGG+AGG | - | chr4.2:32008968-32008987 | MS.gene065890:intron | 55.0% | |
| TCCTGCTCGTTGAGCCTGAT+TGG | + | chr4.2:32006295-32006314 | None:intergenic | 55.0% | |
| TCGTCCACGGACGATTGATG+CGG | + | chr4.2:32006230-32006249 | None:intergenic | 55.0% | |
| ! | GGGGAAGGTTCTAGCATGTC+AGG | - | chr4.2:32009973-32009992 | MS.gene065890:CDS | 55.0% |
| ! | TCCTGTTGGCTGCTGTGATG+TGG | - | chr4.2:32009451-32009470 | MS.gene065890:intron | 55.0% |
| ! | TGATGACGATGCTGCTTCCC+AGG | - | chr4.2:32006406-32006425 | MS.gene065890:CDS | 55.0% |
| ! | TGGTGGTTTGTCCCCTGATC+AGG | - | chr4.2:32008320-32008339 | MS.gene065890:intron | 55.0% |
| !! | AAAAAGCGACGGGCTGTTGG+GGG | - | chr4.2:32007224-32007243 | MS.gene065890:intron | 55.0% |
| !! | GAAAAAGCGACGGGCTGTTG+GGG | - | chr4.2:32007223-32007242 | MS.gene065890:intron | 55.0% |
| CCAGGGAGTGGAGGTGATGT+CGG | + | chr4.2:32010051-32010070 | None:intergenic | 60.0% | |
| GAGAGCAGCGTTATCACCGG+CGG | + | chr4.2:32006363-32006382 | None:intergenic | 60.0% | |
| GCCAATCAGGCTCAACGAGC+AGG | - | chr4.2:32006291-32006310 | MS.gene065890:CDS | 60.0% | |
| GCCACATCACAGCAGCCAAC+AGG | + | chr4.2:32009455-32009474 | None:intergenic | 60.0% | |
| GCTCGTTGAGCCTGATTGGC+CGG | + | chr4.2:32006291-32006310 | None:intergenic | 60.0% | |
| GGGAGCTAGTTAGGGTGGTG+TGG | - | chr4.2:32009783-32009802 | MS.gene065890:intron | 60.0% | |
| GTCCGTGGACGAAGAGGATG+AGG | - | chr4.2:32006238-32006257 | MS.gene065890:CDS | 60.0% | |
| GTCTGCTCACTCCGGCTAGA+TGG | + | chr4.2:32006329-32006348 | None:intergenic | 60.0% | |
| GTGCCGGGTTACCATCTAGC+CGG | - | chr4.2:32006315-32006334 | MS.gene065890:CDS | 60.0% | |
| TAGCCGGAGTGAGCAGACCA+CGG | - | chr4.2:32006331-32006350 | MS.gene065890:CDS | 60.0% | |
| AGCCGGAGTGAGCAGACCAC+GGG | - | chr4.2:32006332-32006351 | MS.gene065890:CDS | 65.0% | |
| CCGACATCACCTCCACTCCC+TGG | - | chr4.2:32010048-32010067 | MS.gene065890:CDS | 65.0% | |
| GCAGCCGCATCAATCGTCCG+TGG | - | chr4.2:32006223-32006242 | MS.gene065890:CDS | 65.0% | |
| GGGAGTGGAGGTGATGTCGG+AGG | + | chr4.2:32010048-32010067 | None:intergenic | 65.0% | |
| TCCCCGTGGTCTGCTCACTC+CGG | + | chr4.2:32006337-32006356 | None:intergenic | 65.0% | |
| ! | GGCTCAACGAGCAGGAGTGC+CGG | - | chr4.2:32006299-32006318 | MS.gene065890:CDS | 65.0% |
| !! | GCTCAACGAGCAGGAGTGCC+GGG | - | chr4.2:32006300-32006319 | MS.gene065890:CDS | 65.0% |
| GCCGGAGTGAGCAGACCACG+GGG | - | chr4.2:32006333-32006352 | MS.gene065890:CDS | 70.0% | |
| ATCACCGGCGGCTGTCCCCG+TGG | + | chr4.2:32006351-32006370 | None:intergenic | 75.0% | |
| CAGACCACGGGGACAGCCGC+CGG | - | chr4.2:32006344-32006363 | MS.gene065890:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 32006215 | 32010104 | 32006215 | ID=MS.gene065890 |
| chr4.2 | mRNA | 32006215 | 32010104 | 32006215 | ID=MS.gene065890.t1;Parent=MS.gene065890 |
| chr4.2 | exon | 32009881 | 32010104 | 32009881 | ID=MS.gene065890.t1.exon1;Parent=MS.gene065890.t1 |
| chr4.2 | CDS | 32009881 | 32010104 | 32009881 | ID=cds.MS.gene065890.t1;Parent=MS.gene065890.t1 |
| chr4.2 | exon | 32009032 | 32009105 | 32009032 | ID=MS.gene065890.t1.exon2;Parent=MS.gene065890.t1 |
| chr4.2 | CDS | 32009032 | 32009105 | 32009032 | ID=cds.MS.gene065890.t1;Parent=MS.gene065890.t1 |
| chr4.2 | exon | 32008501 | 32008544 | 32008501 | ID=MS.gene065890.t1.exon3;Parent=MS.gene065890.t1 |
| chr4.2 | CDS | 32008501 | 32008544 | 32008501 | ID=cds.MS.gene065890.t1;Parent=MS.gene065890.t1 |
| chr4.2 | exon | 32007978 | 32008040 | 32007978 | ID=MS.gene065890.t1.exon4;Parent=MS.gene065890.t1 |
| chr4.2 | CDS | 32007978 | 32008040 | 32007978 | ID=cds.MS.gene065890.t1;Parent=MS.gene065890.t1 |
| chr4.2 | exon | 32007725 | 32007871 | 32007725 | ID=MS.gene065890.t1.exon5;Parent=MS.gene065890.t1 |
| chr4.2 | CDS | 32007725 | 32007871 | 32007725 | ID=cds.MS.gene065890.t1;Parent=MS.gene065890.t1 |
| chr4.2 | exon | 32007556 | 32007624 | 32007556 | ID=MS.gene065890.t1.exon6;Parent=MS.gene065890.t1 |
| chr4.2 | CDS | 32007556 | 32007624 | 32007556 | ID=cds.MS.gene065890.t1;Parent=MS.gene065890.t1 |
| chr4.2 | exon | 32007301 | 32007399 | 32007301 | ID=MS.gene065890.t1.exon7;Parent=MS.gene065890.t1 |
| chr4.2 | CDS | 32007301 | 32007399 | 32007301 | ID=cds.MS.gene065890.t1;Parent=MS.gene065890.t1 |
| chr4.2 | exon | 32006725 | 32006795 | 32006725 | ID=MS.gene065890.t1.exon8;Parent=MS.gene065890.t1 |
| chr4.2 | CDS | 32006725 | 32006795 | 32006725 | ID=cds.MS.gene065890.t1;Parent=MS.gene065890.t1 |
| chr4.2 | exon | 32006215 | 32006452 | 32006215 | ID=MS.gene065890.t1.exon9;Parent=MS.gene065890.t1 |
| chr4.2 | CDS | 32006215 | 32006452 | 32006215 | ID=cds.MS.gene065890.t1;Parent=MS.gene065890.t1 |
| Gene Sequence |
| Protein sequence |
