Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066068.t1 | XP_013470218.1 | 90.4 | 394 | 20 | 2 | 22 | 404 | 42 | 428 | 2.50E-192 | 681.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066068.t1 | Q869R1 | 28.1 | 292 | 190 | 5 | 94 | 373 | 199 | 482 | 3.9e-24 | 114.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066068.t1 | A0A072VRF2 | 90.4 | 394 | 20 | 2 | 22 | 404 | 42 | 428 | 1.8e-192 | 681.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050961 | MS.gene066068 | 0.820049 | 8.42E-53 | -1.69E-46 |
| MS.gene051699 | MS.gene066068 | 0.818411 | 1.99E-52 | -1.69E-46 |
| MS.gene051744 | MS.gene066068 | 0.803826 | 2.90E-49 | -1.69E-46 |
| MS.gene052016 | MS.gene066068 | 0.811371 | 7.24E-51 | -1.69E-46 |
| MS.gene052533 | MS.gene066068 | 0.856218 | 3.73E-62 | -1.69E-46 |
| MS.gene054178 | MS.gene066068 | 0.823973 | 1.04E-53 | -1.69E-46 |
| MS.gene054892 | MS.gene066068 | 0.838173 | 3.37E-57 | -1.69E-46 |
| MS.gene054893 | MS.gene066068 | 0.836297 | 1.02E-56 | -1.69E-46 |
| MS.gene055229 | MS.gene066068 | 0.818473 | 1.92E-52 | -1.69E-46 |
| MS.gene056677 | MS.gene066068 | 0.829542 | 4.86E-55 | -1.69E-46 |
| MS.gene05686 | MS.gene066068 | 0.812722 | 3.68E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene066068 | 0.803022 | 4.25E-49 | -1.69E-46 |
| MS.gene058668 | MS.gene066068 | 0.805882 | 1.08E-49 | -1.69E-46 |
| MS.gene059170 | MS.gene066068 | 0.80649 | 8.02E-50 | -1.69E-46 |
| MS.gene05952 | MS.gene066068 | 0.812295 | 4.55E-51 | -1.69E-46 |
| MS.gene059774 | MS.gene066068 | 0.842913 | 1.93E-58 | -1.69E-46 |
| MS.gene05985 | MS.gene066068 | -0.819195 | 1.32E-52 | -1.69E-46 |
| MS.gene059965 | MS.gene066068 | 0.804053 | 2.60E-49 | -1.69E-46 |
| MS.gene060697 | MS.gene066068 | 0.839648 | 1.40E-57 | -1.69E-46 |
| MS.gene061188 | MS.gene066068 | 0.815077 | 1.11E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 104 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGGGTTAACCGAAACTTAT+TGG | 0.156204 | 1.4:-85033375 | MS.gene066068:CDS |
| GTGTTTCTTGTTCTTCTTCA+TGG | 0.194172 | 1.4:-85032054 | MS.gene066068:CDS |
| GATTGCACTGGGATTCCTTT+TGG | 0.198367 | 1.4:-85033479 | MS.gene066068:CDS |
| GGTGGAATTGGGACTGTTCT+TGG | 0.249819 | 1.4:-85033334 | MS.gene066068:CDS |
| GTGTTTGGGCGTGGGTTAAA+TGG | 0.262462 | 1.4:-85030947 | MS.gene066068:CDS |
| TATGCGGCTGCTGGTGGAAT+TGG | 0.288454 | 1.4:-85033346 | MS.gene066068:CDS |
| CTGGAACTTGTGCTGGTGTT+TGG | 0.300120 | 1.4:-85030962 | MS.gene066068:CDS |
| CATGCTCATGGGTATGGTTT+TGG | 0.306935 | 1.4:-85030892 | None:intergenic |
| CACTTACAGATAGCTGTTAA+TGG | 0.312347 | 1.4:-85031113 | MS.gene066068:intron |
| TGCAGAACCAGCATCGTAAA+TGG | 0.317444 | 1.4:+85032426 | None:intergenic |
| ATGGACTTGGTTGTTGTTGT+TGG | 0.342035 | 1.4:-85033311 | MS.gene066068:CDS |
| CATTATTTACTGCAGCTATC+AGG | 0.343855 | 1.4:-85031939 | MS.gene066068:CDS |
| GGTTAACCCGGCATGATTCC+CGG | 0.344297 | 1.4:+85033387 | None:intergenic |
| TGGATGGCCTTATGGTCATT+TGG | 0.345668 | 1.4:-85032327 | MS.gene066068:CDS |
| CGCCGCCACTTCTCCTGCTC+CGG | 0.349096 | 1.4:+85033584 | None:intergenic |
| TGGGAGTTATTCCAATCAAC+TGG | 0.349178 | 1.4:-85031059 | MS.gene066068:CDS |
| AAGTACACTCCTGGTCTTAC+CGG | 0.351688 | 1.4:-85033406 | MS.gene066068:CDS |
| TCACATCCTCACCACTTATC+TGG | 0.355225 | 1.4:-85033254 | MS.gene066068:CDS |
| TATGCTTTAACAACATCTTT+TGG | 0.365686 | 1.4:-85031979 | MS.gene066068:CDS |
| TGGAACTTGTGCTGGTGTTT+GGG | 0.373882 | 1.4:-85030961 | MS.gene066068:CDS |
| CTTGTGCTGGTGTTTGGGCG+TGG | 0.385820 | 1.4:-85030956 | MS.gene066068:CDS |
| TGGCCGCTTTATGCGGCTGC+TGG | 0.391745 | 1.4:-85033355 | MS.gene066068:CDS |
| CTTTCATCATTTGAGTAGCC+TGG | 0.393996 | 1.4:+85033284 | None:intergenic |
| ATGCGGCTGCTGGTGGAATT+GGG | 0.395736 | 1.4:-85033345 | MS.gene066068:CDS |
| TGGTAAAAGCTTCAACAATT+CGG | 0.402401 | 1.4:-85031093 | MS.gene066068:CDS |
| ATACTGCAAAGATTTCATTA+AGG | 0.403891 | 1.4:+85031999 | None:intergenic |
| TGGACTTGGTTGTTGTTGTT+GGG | 0.404889 | 1.4:-85033310 | MS.gene066068:CDS |
| CACATCCATGCTCATGGGTA+TGG | 0.406680 | 1.4:-85030898 | MS.gene066068:CDS |
| GTTGTTGTTGTTGGGTTCCC+AGG | 0.413364 | 1.4:-85033302 | MS.gene066068:CDS |
| TAACAAATATGCCTATGTTC+AGG | 0.414206 | 1.4:-85031703 | MS.gene066068:intron |
| GGACTGTTCTTGGATGGACT+TGG | 0.421193 | 1.4:-85033324 | MS.gene066068:CDS |
| AGTGATAGAGTTATTATGAT+TGG | 0.422509 | 1.4:-85030924 | MS.gene066068:CDS |
| CTTGTGGCATATGATTGTTC+AGG | 0.424285 | 1.4:-85031026 | MS.gene066068:CDS |
| GTGCCTCAACCCCAGTTGAT+TGG | 0.426924 | 1.4:+85031048 | None:intergenic |
| GATTTCCCTCTTTCATCTTG+TGG | 0.431931 | 1.4:-85031745 | MS.gene066068:CDS |
| CCGCTTTATGCGGCTGCTGG+TGG | 0.442048 | 1.4:-85033352 | MS.gene066068:CDS |
| TGTGATTCATTTGATTGCAC+TGG | 0.442197 | 1.4:-85033491 | MS.gene066068:CDS |
| ACTGTGCATGTTATAGTGTC+TGG | 0.442564 | 1.4:-85032081 | MS.gene066068:CDS |
| CAGACTTCCATTTACGATGC+TGG | 0.447339 | 1.4:-85032433 | MS.gene066068:CDS |
| TGGCGGCGGCAGCAGTGAAA+TGG | 0.448408 | 1.4:-85033569 | MS.gene066068:CDS |
| TCTTTCAGATACGTGGACTT+AGG | 0.451037 | 1.4:-85031807 | MS.gene066068:intron |
| TTATGGTCATTTGGAGCAGC+AGG | 0.454748 | 1.4:-85032318 | MS.gene066068:CDS |
| ATAAAGCGGCCAATAAGTTT+CGG | 0.462577 | 1.4:+85033366 | None:intergenic |
| GAATTGGGACTGTTCTTGGA+TGG | 0.462942 | 1.4:-85033330 | MS.gene066068:CDS |
| GATTTCATTAAGGAGTTAGC+AGG | 0.469510 | 1.4:+85032009 | None:intergenic |
| CGGCAGAACAATCGCGGCGG+TGG | 0.470242 | 1.4:-85033540 | MS.gene066068:CDS |
| GCCGCCACTTCTCCTGCTCC+GGG | 0.471009 | 1.4:+85033585 | None:intergenic |
| TTGTGCTGGTGTTTGGGCGT+GGG | 0.472291 | 1.4:-85030955 | MS.gene066068:CDS |
| GGTCTTACCGGGAATCATGC+CGG | 0.474937 | 1.4:-85033394 | MS.gene066068:CDS |
| TGCTGCTCCAAATGACCATA+AGG | 0.477819 | 1.4:+85032320 | None:intergenic |
| GATAGAGTGCATCCCGGAGC+AGG | 0.479116 | 1.4:-85033597 | None:intergenic |
| AACTTATTGGCCGCTTTATG+CGG | 0.485649 | 1.4:-85033362 | MS.gene066068:CDS |
| ATTCCAATCAACTGGGGTTG+AGG | 0.495610 | 1.4:-85031051 | MS.gene066068:CDS |
| TGGCTCCACATCCATGCTCA+TGG | 0.509273 | 1.4:-85030904 | MS.gene066068:CDS |
| GTGGCTTCAAACTTGAGTGA+TGG | 0.511129 | 1.4:-85032291 | MS.gene066068:CDS |
| CGTGGACTTAGGTCAAAGAT+TGG | 0.513470 | 1.4:-85031796 | MS.gene066068:CDS |
| ATTTGGAGCAGCAGGTGTTG+TGG | 0.514073 | 1.4:-85032310 | MS.gene066068:CDS |
| TGGCTTCAAACTTGAGTGAT+GGG | 0.514253 | 1.4:-85032290 | MS.gene066068:CDS |
| TTGATAACTGGAACTTGTGC+TGG | 0.515273 | 1.4:-85030969 | MS.gene066068:CDS |
| CACGACACTCTCATGACCTC+GGG | 0.515499 | 1.4:+85032375 | None:intergenic |
| CAGCAGTGAAATGGTGGTGG+CGG | 0.515947 | 1.4:-85033560 | MS.gene066068:CDS |
| AACTGGGGTTGAGGCACTTG+TGG | 0.518075 | 1.4:-85031042 | MS.gene066068:CDS |
| GGCTCCACATCCATGCTCAT+GGG | 0.527680 | 1.4:-85030903 | MS.gene066068:CDS |
| GGGACGCTGGTGGCTTCTTG+TGG | 0.527891 | 1.4:-85032268 | MS.gene066068:intron |
| CCAATAAGTTTCGGTTAACC+CGG | 0.528188 | 1.4:+85033375 | None:intergenic |
| TTTCATCATTTGAGTAGCCT+GGG | 0.528321 | 1.4:+85033285 | None:intergenic |
| GTCTTACCGGGAATCATGCC+GGG | 0.530497 | 1.4:-85033393 | MS.gene066068:CDS |
| ATGTTATATCCGTCATAGAC+AGG | 0.534896 | 1.4:-85033148 | MS.gene066068:intron |
| CGGCAGCAGTGAAATGGTGG+TGG | 0.537136 | 1.4:-85033563 | MS.gene066068:CDS |
| AGCTATCAGGACACTGCGAT+GGG | 0.545630 | 1.4:-85031926 | MS.gene066068:CDS |
| CAGCTATCAGGACACTGCGA+TGG | 0.546217 | 1.4:-85031927 | MS.gene066068:CDS |
| CATACCCATGAGCATGGATG+TGG | 0.547051 | 1.4:+85030899 | None:intergenic |
| GTGATTCATTTGATTGCACT+GGG | 0.557586 | 1.4:-85033490 | MS.gene066068:CDS |
| GAGTCTCCACAAGATGAAAG+AGG | 0.562520 | 1.4:+85031739 | None:intergenic |
| AGTACACTCCTGGTCTTACC+GGG | 0.564946 | 1.4:-85033405 | MS.gene066068:CDS |
| ACTTATGACAGCCAGATAAG+TGG | 0.565648 | 1.4:+85033243 | None:intergenic |
| GCATGATTCCCGGTAAGACC+AGG | 0.566292 | 1.4:+85033397 | None:intergenic |
| CCACCAGCAGCCGCATAAAG+CGG | 0.568080 | 1.4:+85033352 | None:intergenic |
| AACATTGATAAGTACACTCC+TGG | 0.568478 | 1.4:-85033415 | MS.gene066068:CDS |
| CAATTCGGCTAGAGATGCAT+GGG | 0.574864 | 1.4:-85031078 | MS.gene066068:CDS |
| CGGCGGCAGCAGTGAAATGG+TGG | 0.576587 | 1.4:-85033566 | MS.gene066068:CDS |
| TCTTCTTCATGGTGGTAGAG+AGG | 0.577354 | 1.4:-85032043 | MS.gene066068:CDS |
| GGGAGTTATTCCAATCAACT+GGG | 0.587121 | 1.4:-85031058 | MS.gene066068:CDS |
| GCATCCCGGAGCAGGAGAAG+TGG | 0.587204 | 1.4:-85033589 | MS.gene066068:CDS |
| ACAATTCGGCTAGAGATGCA+TGG | 0.589439 | 1.4:-85031079 | MS.gene066068:CDS |
| ACAATCTGGTACCTGAACAT+AGG | 0.589676 | 1.4:+85031692 | None:intergenic |
| CTGTGCATGTTATAGTGTCT+GGG | 0.592316 | 1.4:-85032080 | MS.gene066068:CDS |
| AGTCTCCACAAGATGAAAGA+GGG | 0.597792 | 1.4:+85031740 | None:intergenic |
| CAAAACCATACCCATGAGCA+TGG | 0.598545 | 1.4:+85030893 | None:intergenic |
| CGGAGCAGGAGAAGTGGCGG+CGG | 0.601918 | 1.4:-85033583 | MS.gene066068:CDS |
| ACACGACACTCTCATGACCT+CGG | 0.602868 | 1.4:+85032374 | None:intergenic |
| TATGGTGATAGAGTGCATCC+CGG | 0.611166 | 1.4:-85033603 | None:intergenic |
| TTTCTTGTTCTTCTTCATGG+TGG | 0.614678 | 1.4:-85032051 | MS.gene066068:CDS |
| GGGCAAATACCTGTCTATGA+CGG | 0.619121 | 1.4:+85033139 | None:intergenic |
| TCCCGGAGCAGGAGAAGTGG+CGG | 0.621772 | 1.4:-85033586 | MS.gene066068:CDS |
| GGCTTCAAACTTGAGTGATG+GGG | 0.633313 | 1.4:-85032289 | MS.gene066068:CDS |
| TATCAGGACACTGCGATGGG+AGG | 0.638311 | 1.4:-85031923 | MS.gene066068:CDS |
| GCATGTTATAGTGTCTGGGA+TGG | 0.645145 | 1.4:-85032076 | MS.gene066068:CDS |
| TGGTGGCGGCAGAACAATCG+CGG | 0.651883 | 1.4:-85033546 | MS.gene066068:CDS |
| TGACAGCCAGATAAGTGGTG+AGG | 0.678207 | 1.4:+85033248 | None:intergenic |
| GATGGTTTGGAATCTTCCCG+AGG | 0.685332 | 1.4:-85032391 | MS.gene066068:CDS |
| GGAGTTATTCCAATCAACTG+GGG | 0.706705 | 1.4:-85031057 | MS.gene066068:CDS |
| GCTTCAAACTTGAGTGATGG+GGG | 0.710727 | 1.4:-85032288 | MS.gene066068:CDS |
| TGGCGGCAGAACAATCGCGG+CGG | 0.757815 | 1.4:-85033543 | MS.gene066068:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr1.4:85031777-85031796 | None:intergenic | 100.0% |
| !! | AGTGAATAATATTATTTGAT+CGG | - | chr1.4:85031421-85031440 | MS.gene066068:intron | 15.0% |
| !! | ATATAAAAAAATCAACAATC+TGG | + | chr1.4:85032808-85032827 | None:intergenic | 15.0% |
| !! | GAATAGTCTAATAATTAAAA+AGG | - | chr1.4:85033200-85033219 | MS.gene066068:CDS | 15.0% |
| !! | TATACAAACATAAATGTATT+TGG | + | chr1.4:85033082-85033101 | None:intergenic | 15.0% |
| !!! | TATTGACTTTTATAAATGTT+TGG | + | chr1.4:85031649-85031668 | None:intergenic | 15.0% |
| !! | AAAGAAAGAAGAAAAAAAAC+GGG | + | chr1.4:85031979-85031998 | None:intergenic | 20.0% |
| !! | GAAAGAAAGAAGAAAAAAAA+CGG | + | chr1.4:85031980-85031999 | None:intergenic | 20.0% |
| !! | TTTAATATAGATGATGAAGT+GGG | - | chr1.4:85031693-85031712 | MS.gene066068:intron | 20.0% |
| !!! | ACTACTAAAACTTCAATTTT+GGG | + | chr1.4:85031815-85031834 | None:intergenic | 20.0% |
| !!! | CGTTAAACATGATTTTTAAT+AGG | - | chr1.4:85033275-85033294 | MS.gene066068:CDS | 20.0% |
| !!! | TTTATAAATGTTTGGATTAG+CGG | + | chr1.4:85031641-85031660 | None:intergenic | 20.0% |
| ! | AAAGGAGATCAAGAATATAT+AGG | - | chr1.4:85033218-85033237 | MS.gene066068:intron | 25.0% |
| ! | AACACAAACATATGATTTCA+GGG | + | chr1.4:85031367-85031386 | None:intergenic | 25.0% |
| ! | AATAATGTACTTCTTGATAC+GGG | - | chr1.4:85031665-85031684 | MS.gene066068:intron | 25.0% |
| ! | AGTGATAGAGTTATTATGAT+TGG | - | chr1.4:85033559-85033578 | MS.gene066068:CDS | 25.0% |
| ! | ATACTGCAAAGATTTCATTA+AGG | + | chr1.4:85032487-85032506 | None:intergenic | 25.0% |
| ! | CAATAATGTACTTCTTGATA+CGG | - | chr1.4:85031664-85031683 | MS.gene066068:intron | 25.0% |
| ! | CATTGCAACTTGAAATTTAT+TGG | + | chr1.4:85031525-85031544 | None:intergenic | 25.0% |
| ! | GTTTAATATAGATGATGAAG+TGG | - | chr1.4:85031692-85031711 | MS.gene066068:intron | 25.0% |
| ! | TATTCACTCTAACATATTCA+GGG | + | chr1.4:85031409-85031428 | None:intergenic | 25.0% |
| ! | TCATTCTGTATGTTCTTATT+TGG | - | chr1.4:85032259-85032278 | MS.gene066068:intron | 25.0% |
| ! | TTATTACATTTCATGCTTAC+AGG | - | chr1.4:85032335-85032354 | MS.gene066068:CDS | 25.0% |
| ! | TTATTCACTCTAACATATTC+AGG | + | chr1.4:85031410-85031429 | None:intergenic | 25.0% |
| !! | CTACTAAAACTTCAATTTTG+GGG | + | chr1.4:85031814-85031833 | None:intergenic | 25.0% |
| !! | GACTACTAAAACTTCAATTT+TGG | + | chr1.4:85031816-85031835 | None:intergenic | 25.0% |
| !! | TACTAAAACTTCAATTTTGG+GGG | + | chr1.4:85031813-85031832 | None:intergenic | 25.0% |
| !! | TATGCTTTAACAACATCTTT+TGG | - | chr1.4:85032504-85032523 | MS.gene066068:intron | 25.0% |
| !! | TTTTCTCTGTAAGCTTATTT+TGG | - | chr1.4:85032358-85032377 | MS.gene066068:CDS | 25.0% |
| !!! | ATTTTGTGTTCTAAAAGAAC+AGG | + | chr1.4:85031483-85031502 | None:intergenic | 25.0% |
| !!! | TAAATTTCAAGTTGCAATGT+TGG | - | chr1.4:85031526-85031545 | MS.gene066068:intron | 25.0% |
| !!! | TCTTTTATTTTTGTCTACGA+TGG | - | chr1.4:85031998-85032017 | MS.gene066068:CDS | 25.0% |
| !!! | TTTTGTGTTCTAAAAGAACA+GGG | + | chr1.4:85031482-85031501 | None:intergenic | 25.0% |
| AAACCAAGCCACAAAAAATT+AGG | + | chr1.4:85031951-85031970 | None:intergenic | 30.0% | |
| AAACTTACACAACAATGACA+TGG | - | chr1.4:85033329-85033348 | MS.gene066068:CDS | 30.0% | |
| ACTACTGATAATTACTGAGA+AGG | - | chr1.4:85032834-85032853 | MS.gene066068:intron | 30.0% | |
| AGGAATGTGTAAGAATTTGT+CGG | - | chr1.4:85032854-85032873 | MS.gene066068:intron | 30.0% | |
| AGTTATCAATCCACCAAAAA+TGG | + | chr1.4:85033503-85033522 | None:intergenic | 30.0% | |
| ATGTTTGTATAGTCAGTTGT+AGG | - | chr1.4:85033091-85033110 | MS.gene066068:intron | 30.0% | |
| CAACACAAACATATGATTTC+AGG | + | chr1.4:85031368-85031387 | None:intergenic | 30.0% | |
| CCTTAATAAAGAGAGTAGAT+CGG | - | chr1.4:85033172-85033191 | MS.gene066068:CDS | 30.0% | |
| CTGAAATCATATGTTTGTGT+TGG | - | chr1.4:85031366-85031385 | MS.gene066068:intron | 30.0% | |
| GTGTAAGTTTACCAATTACA+CGG | + | chr1.4:85033319-85033338 | None:intergenic | 30.0% | |
| TAACAAATATGCCTATGTTC+AGG | - | chr1.4:85032780-85032799 | MS.gene066068:intron | 30.0% | |
| TCTATGTTTACTGCATCAAA+TGG | - | chr1.4:85031723-85031742 | MS.gene066068:CDS | 30.0% | |
| TGGTAAAAGCTTCAACAATT+CGG | - | chr1.4:85033390-85033409 | MS.gene066068:CDS | 30.0% | |
| TTCCTTACTCCTTACTATAA+AGG | - | chr1.4:85032930-85032949 | MS.gene066068:intron | 30.0% | |
| ! | ACTAAAACTTCAATTTTGGG+GGG | + | chr1.4:85031812-85031831 | None:intergenic | 30.0% |
| ! | CTCTTTATTAAGGCTTTTAC+AGG | + | chr1.4:85033165-85033184 | None:intergenic | 30.0% |
| !! | AATCTCACCTAAGTTGATTT+GGG | - | chr1.4:85033124-85033143 | MS.gene066068:intron | 30.0% |
| !! | TCTTTTGGTAGCATTTGTTA+TGG | - | chr1.4:85032519-85032538 | MS.gene066068:intron | 30.0% |
| !!! | ATTTTTGGTGGATTGATAAC+TGG | - | chr1.4:85033502-85033521 | MS.gene066068:CDS | 30.0% |
| AAAAAGCTGTGAAGATGGTT+TGG | - | chr1.4:85032079-85032098 | MS.gene066068:CDS | 35.0% | |
| AACATTGATAAGTACACTCC+TGG | - | chr1.4:85031068-85031087 | MS.gene066068:CDS | 35.0% | |
| AATTTGTCGGGTAAAGTTCT+TGG | - | chr1.4:85032867-85032886 | MS.gene066068:intron | 35.0% | |
| ACAACTCATTTGCTTTCCAT+AGG | + | chr1.4:85033027-85033046 | None:intergenic | 35.0% | |
| ACAGTACCTCCTTTATAGTA+AGG | + | chr1.4:85032942-85032961 | None:intergenic | 35.0% | |
| ACGGAAATGCAAATAAACAG+CGG | - | chr1.4:85031844-85031863 | MS.gene066068:intron | 35.0% | |
| AGTTTGTAGATGAATGTTGC+AGG | - | chr1.4:85031923-85031942 | MS.gene066068:CDS | 35.0% | |
| ATAAAGCGGCCAATAAGTTT+CGG | + | chr1.4:85031120-85031139 | None:intergenic | 35.0% | |
| ATGTTATATCCGTCATAGAC+AGG | - | chr1.4:85031335-85031354 | MS.gene066068:intron | 35.0% | |
| CACAACAATGACATGGTTAA+TGG | - | chr1.4:85033336-85033355 | MS.gene066068:CDS | 35.0% | |
| CACTTACAGATAGCTGTTAA+TGG | - | chr1.4:85033370-85033389 | MS.gene066068:CDS | 35.0% | |
| CATTATTTACTGCAGCTATC+AGG | - | chr1.4:85032544-85032563 | MS.gene066068:intron | 35.0% | |
| CCGATCTACTCTCTTTATTA+AGG | + | chr1.4:85033175-85033194 | None:intergenic | 35.0% | |
| CTCCTTTATAGTAAGGAGTA+AGG | + | chr1.4:85032935-85032954 | None:intergenic | 35.0% | |
| CTGTTTATTTGCATTTCCGT+TGG | + | chr1.4:85031844-85031863 | None:intergenic | 35.0% | |
| CTTACTCCTTACTATAAAGG+AGG | - | chr1.4:85032933-85032952 | MS.gene066068:intron | 35.0% | |
| GATTTCATTAAGGAGTTAGC+AGG | + | chr1.4:85032477-85032496 | None:intergenic | 35.0% | |
| GGAATGTGTAAGAATTTGTC+GGG | - | chr1.4:85032855-85032874 | MS.gene066068:intron | 35.0% | |
| GTGATTCATTTGATTGCACT+GGG | - | chr1.4:85030993-85031012 | MS.gene066068:CDS | 35.0% | |
| GTGTTTCTTGTTCTTCTTCA+TGG | - | chr1.4:85032429-85032448 | MS.gene066068:CDS | 35.0% | |
| TATTGCATGATCCGTGTAAT+TGG | - | chr1.4:85033305-85033324 | MS.gene066068:CDS | 35.0% | |
| TGTGATTCATTTGATTGCAC+TGG | - | chr1.4:85030992-85031011 | MS.gene066068:CDS | 35.0% | |
| TGTGGAAAATACGAGTTAAG+TGG | - | chr1.4:85032959-85032978 | MS.gene066068:intron | 35.0% | |
| TTACACGGATCATGCAATAT+CGG | + | chr1.4:85033304-85033323 | None:intergenic | 35.0% | |
| TTTCATCATTTGAGTAGCCT+GGG | + | chr1.4:85031201-85031220 | None:intergenic | 35.0% | |
| TTTCTTGTTCTTCTTCATGG+TGG | - | chr1.4:85032432-85032451 | MS.gene066068:CDS | 35.0% | |
| ! | ATGAGAAAGTATGCATAGAG+CGG | + | chr1.4:85031896-85031915 | None:intergenic | 35.0% |
| ! | CTGTATGTTCTTATTTGGAC+TGG | - | chr1.4:85032264-85032283 | MS.gene066068:intron | 35.0% |
| ! | GTCATAAGTGTTTTGTGTTC+TGG | - | chr1.4:85031254-85031273 | MS.gene066068:intron | 35.0% |
| !! | CTAAAACTTCAATTTTGGGG+GGG | + | chr1.4:85031811-85031830 | None:intergenic | 35.0% |
| !! | GAATCTCACCTAAGTTGATT+TGG | - | chr1.4:85033123-85033142 | MS.gene066068:intron | 35.0% |
| !! | GTTCTTATTTGGACTGGTTA+TGG | - | chr1.4:85032270-85032289 | MS.gene066068:CDS | 35.0% |
| !! | TAAAACTTCAATTTTGGGGG+GGG | + | chr1.4:85031810-85031829 | None:intergenic | 35.0% |
| !! | TCGTTTTTCTTTCAGATACG+TGG | - | chr1.4:85032669-85032688 | MS.gene066068:intron | 35.0% |
| !! | TTACTATAAAGGAGGTACTG+TGG | - | chr1.4:85032941-85032960 | MS.gene066068:intron | 35.0% |
| !! | TTCAAGTTGCAATGTTGGAT+TGG | - | chr1.4:85031531-85031550 | MS.gene066068:intron | 35.0% |
| !!! | GTTCCTAATTTTTTGTGGCT+TGG | - | chr1.4:85031945-85031964 | MS.gene066068:CDS | 35.0% |
| !!! | TCATGTTTGCTGTGCTTTTA+TGG | - | chr1.4:85032136-85032155 | MS.gene066068:intron | 35.0% |
| !!! | TCTGTAAGCTTATTTTGGAC+AGG | - | chr1.4:85032363-85032382 | MS.gene066068:CDS | 35.0% |
| !!! | TGCAGGTTCCTAATTTTTTG+TGG | - | chr1.4:85031940-85031959 | MS.gene066068:CDS | 35.0% |
| AATAACAGCGTCATCAGATG+AGG | + | chr1.4:85032320-85032339 | None:intergenic | 40.0% | |
| ACAATCTGGTACCTGAACAT+AGG | + | chr1.4:85032794-85032813 | None:intergenic | 40.0% | |
| ACACAAGCCCAAATCAACTT+AGG | + | chr1.4:85033134-85033153 | None:intergenic | 40.0% | |
| ACTGTGCATGTTATAGTGTC+TGG | - | chr1.4:85032402-85032421 | MS.gene066068:CDS | 40.0% | |
| ACTTATGACAGCCAGATAAG+TGG | + | chr1.4:85031243-85031262 | None:intergenic | 40.0% | |
| AGAAAAGAAGCCATGAGGAT+TGG | + | chr1.4:85032026-85032045 | None:intergenic | 40.0% | |
| AGTCTCCACAAGATGAAAGA+GGG | + | chr1.4:85032746-85032765 | None:intergenic | 40.0% | |
| ATGACTTCAAGTGCTACCTA+TGG | - | chr1.4:85033008-85033027 | MS.gene066068:intron | 40.0% | |
| CCAATAAGTTTCGGTTAACC+CGG | + | chr1.4:85031111-85031130 | None:intergenic | 40.0% | |
| CGGCGAGATTGATAGAATTA+TGG | - | chr1.4:85031554-85031573 | MS.gene066068:intron | 40.0% | |
| CTGTGCATGTTATAGTGTCT+GGG | - | chr1.4:85032403-85032422 | MS.gene066068:CDS | 40.0% | |
| CTTGTGGCATATGATTGTTC+AGG | - | chr1.4:85033457-85033476 | MS.gene066068:CDS | 40.0% | |
| CTTTCATCATTTGAGTAGCC+TGG | + | chr1.4:85031202-85031221 | None:intergenic | 40.0% | |
| GATTTCCCTCTTTCATCTTG+TGG | - | chr1.4:85032738-85032757 | MS.gene066068:intron | 40.0% | |
| GGAATACACCCAAGTGAAAA+TGG | + | chr1.4:85032914-85032933 | None:intergenic | 40.0% | |
| GGAGTTATTCCAATCAACTG+GGG | - | chr1.4:85033426-85033445 | MS.gene066068:CDS | 40.0% | |
| GGGAGTTATTCCAATCAACT+GGG | - | chr1.4:85033425-85033444 | MS.gene066068:CDS | 40.0% | |
| GTGGTTGTTGAGACTAATTG+AGG | - | chr1.4:85032978-85032997 | MS.gene066068:intron | 40.0% | |
| GTTCTTGGCAGCATCATATT+TGG | - | chr1.4:85032882-85032901 | MS.gene066068:intron | 40.0% | |
| TCTGCAAAAAGCTGTGAAGA+TGG | - | chr1.4:85032074-85032093 | MS.gene066068:CDS | 40.0% | |
| TCTTTCAGATACGTGGACTT+AGG | - | chr1.4:85032676-85032695 | MS.gene066068:intron | 40.0% | |
| TGGCTTCAAACTTGAGTGAT+GGG | - | chr1.4:85032193-85032212 | MS.gene066068:intron | 40.0% | |
| TGGGAGTTATTCCAATCAAC+TGG | - | chr1.4:85033424-85033443 | MS.gene066068:CDS | 40.0% | |
| TTATTTGCATTTCCGTTGGC+AGG | + | chr1.4:85031840-85031859 | None:intergenic | 40.0% | |
| ! | AACTTATTGGCCGCTTTATG+CGG | - | chr1.4:85031121-85031140 | MS.gene066068:intron | 40.0% |
| ! | AAGTTGCAATGTTGGATTGG+CGG | - | chr1.4:85031534-85031553 | MS.gene066068:intron | 40.0% |
| ! | ATGGACTTGGTTGTTGTTGT+TGG | - | chr1.4:85031172-85031191 | MS.gene066068:intron | 40.0% |
| ! | ATTGCACTGGGATTCCTTTT+GGG | - | chr1.4:85031005-85031024 | MS.gene066068:CDS | 40.0% |
| ! | CTGGACTAACCAGATTTTCT+GGG | - | chr1.4:85031273-85031292 | MS.gene066068:intron | 40.0% |
| ! | GCGGTTAGTTCAGTTTCTTA+AGG | - | chr1.4:85031863-85031882 | MS.gene066068:intron | 40.0% |
| ! | TCTGGACTAACCAGATTTTC+TGG | - | chr1.4:85031272-85031291 | MS.gene066068:intron | 40.0% |
| ! | TGAGAAAGTATGCATAGAGC+GGG | + | chr1.4:85031895-85031914 | None:intergenic | 40.0% |
| ! | TGGACTAACCAGATTTTCTG+GGG | - | chr1.4:85031274-85031293 | MS.gene066068:intron | 40.0% |
| ! | TGGACTTGGTTGTTGTTGTT+GGG | - | chr1.4:85031173-85031192 | MS.gene066068:intron | 40.0% |
| ! | TTGATAACTGGAACTTGTGC+TGG | - | chr1.4:85033514-85033533 | MS.gene066068:CDS | 40.0% |
| ! | TTTTAGTAGTCTCCTGCCAA+CGG | - | chr1.4:85031825-85031844 | MS.gene066068:intron | 40.0% |
| !! | AAAACTTCAATTTTGGGGGG+GGG | + | chr1.4:85031809-85031828 | None:intergenic | 40.0% |
| !! | AAGTTGATTTGGGCTTGTGT+GGG | - | chr1.4:85033134-85033153 | MS.gene066068:intron | 40.0% |
| !! | GGTTTCAGCCATTTTCACTT+GGG | - | chr1.4:85032903-85032922 | MS.gene066068:intron | 40.0% |
| !! | TAAGTTGATTTGGGCTTGTG+TGG | - | chr1.4:85033133-85033152 | MS.gene066068:intron | 40.0% |
| !! | TGCTTTTATGGATGGCCTTA+TGG | - | chr1.4:85032148-85032167 | MS.gene066068:intron | 40.0% |
| !! | TGGTTTCAGCCATTTTCACT+TGG | - | chr1.4:85032902-85032921 | MS.gene066068:intron | 40.0% |
| !! | TTGCTAATGGGCACCATTTT+TGG | - | chr1.4:85033487-85033506 | MS.gene066068:CDS | 40.0% |
| !!! | GTTTGCTGTGCTTTTATGGA+TGG | - | chr1.4:85032140-85032159 | MS.gene066068:intron | 40.0% |
| !!! | TCAGGTGCTGTTTTGCTAAT+GGG | - | chr1.4:85033475-85033494 | MS.gene066068:CDS | 40.0% |
| !!! | TGGCATGATGTTTTCTGGTT+AGG | - | chr1.4:85030963-85030982 | MS.gene066068:CDS | 40.0% |
| !!! | TTCAGGTGCTGTTTTGCTAA+TGG | - | chr1.4:85033474-85033493 | MS.gene066068:CDS | 40.0% |
| ACAATTCGGCTAGAGATGCA+TGG | - | chr1.4:85033404-85033423 | MS.gene066068:CDS | 45.0% | |
| ATTCCAATCAACTGGGGTTG+AGG | - | chr1.4:85033432-85033451 | MS.gene066068:CDS | 45.0% | |
| CAAAACCATACCCATGAGCA+TGG | + | chr1.4:85033593-85033612 | None:intergenic | 45.0% | |
| CAATTCGGCTAGAGATGCAT+GGG | - | chr1.4:85033405-85033424 | MS.gene066068:CDS | 45.0% | |
| CAGACTTCCATTTACGATGC+TGG | - | chr1.4:85032050-85032069 | MS.gene066068:CDS | 45.0% | |
| CAGCATCGTAAATGGAAGTC+TGG | + | chr1.4:85032052-85032071 | None:intergenic | 45.0% | |
| CCGGGTTAACCGAAACTTAT+TGG | - | chr1.4:85031108-85031127 | MS.gene066068:intron | 45.0% | |
| CGTGGACTTAGGTCAAAGAT+TGG | - | chr1.4:85032687-85032706 | MS.gene066068:intron | 45.0% | |
| GAATTGGGACTGTTCTTGGA+TGG | - | chr1.4:85031153-85031172 | MS.gene066068:intron | 45.0% | |
| GAGTCTCCACAAGATGAAAG+AGG | + | chr1.4:85032747-85032766 | None:intergenic | 45.0% | |
| GCATGTTATAGTGTCTGGGA+TGG | - | chr1.4:85032407-85032426 | MS.gene066068:CDS | 45.0% | |
| GCTTCAAACTTGAGTGATGG+GGG | - | chr1.4:85032195-85032214 | MS.gene066068:intron | 45.0% | |
| GGAGAAGAAAAGAAGCCATG+AGG | + | chr1.4:85032031-85032050 | None:intergenic | 45.0% | |
| GGCTTCAAACTTGAGTGATG+GGG | - | chr1.4:85032194-85032213 | MS.gene066068:intron | 45.0% | |
| GGGCAAATACCTGTCTATGA+CGG | + | chr1.4:85031347-85031366 | None:intergenic | 45.0% | |
| GTGGCTTCAAACTTGAGTGA+TGG | - | chr1.4:85032192-85032211 | MS.gene066068:intron | 45.0% | |
| TACGATGGTTCCAATCCTCA+TGG | - | chr1.4:85032013-85032032 | MS.gene066068:CDS | 45.0% | |
| TCACATCCTCACCACTTATC+TGG | - | chr1.4:85031229-85031248 | MS.gene066068:intron | 45.0% | |
| TCTTCTTCATGGTGGTAGAG+AGG | - | chr1.4:85032440-85032459 | MS.gene066068:intron | 45.0% | |
| TGCAGAACCAGCATCGTAAA+TGG | + | chr1.4:85032060-85032079 | None:intergenic | 45.0% | |
| TGCTGCTCCAAATGACCATA+AGG | + | chr1.4:85032166-85032185 | None:intergenic | 45.0% | |
| TGTTGGATTGCAGAAGCGAT+TGG | - | chr1.4:85031383-85031402 | MS.gene066068:intron | 45.0% | |
| ! | GACTAACCAGATTTTCTGGG+GGG | - | chr1.4:85031276-85031295 | MS.gene066068:intron | 45.0% |
| ! | GATTGCACTGGGATTCCTTT+TGG | - | chr1.4:85031004-85031023 | MS.gene066068:CDS | 45.0% |
| ! | GGACTAACCAGATTTTCTGG+GGG | - | chr1.4:85031275-85031294 | MS.gene066068:intron | 45.0% |
| ! | TGGAACTTGTGCTGGTGTTT+GGG | - | chr1.4:85033522-85033541 | MS.gene066068:CDS | 45.0% |
| ! | TTATGGTCATTTGGAGCAGC+AGG | - | chr1.4:85032165-85032184 | MS.gene066068:intron | 45.0% |
| ! | TTGCACTGGGATTCCTTTTG+GGG | - | chr1.4:85031006-85031025 | MS.gene066068:CDS | 45.0% |
| !! | AAACTTCAATTTTGGGGGGG+GGG | + | chr1.4:85031808-85031827 | None:intergenic | 45.0% |
| !! | AAGTACACTCCTGGTCTTAC+CGG | - | chr1.4:85031077-85031096 | MS.gene066068:CDS | 45.0% |
| !! | CTAATGGGCACCATTTTTGG+TGG | - | chr1.4:85033490-85033509 | MS.gene066068:CDS | 45.0% |
| !! | GTTTGGATTAGCGGTGAGTT+TGG | + | chr1.4:85031632-85031651 | None:intergenic | 45.0% |
| !! | TGGATGGCCTTATGGTCATT+TGG | - | chr1.4:85032156-85032175 | MS.gene066068:intron | 45.0% |
| !!! | TATTAAAATTTAGATTTTAA+TGG | - | chr1.4:85033247-85033266 | MS.gene066068:intron | 5.0% |
| AAGCAACCCCCCAGAAAATC+TGG | + | chr1.4:85031285-85031304 | None:intergenic | 50.0% | |
| ACACGACACTCTCATGACCT+CGG | + | chr1.4:85032112-85032131 | None:intergenic | 50.0% | |
| AGCTATCAGGACACTGCGAT+GGG | - | chr1.4:85032557-85032576 | MS.gene066068:intron | 50.0% | |
| CACATCCATGCTCATGGGTA+TGG | - | chr1.4:85033585-85033604 | MS.gene066068:CDS | 50.0% | |
| CATACCCATGAGCATGGATG+TGG | + | chr1.4:85033587-85033606 | None:intergenic | 50.0% | |
| GGTGGAATTGGGACTGTTCT+TGG | - | chr1.4:85031149-85031168 | MS.gene066068:intron | 50.0% | |
| TGACAGCCAGATAAGTGGTG+AGG | + | chr1.4:85031238-85031257 | None:intergenic | 50.0% | |
| TGAGACCAAGAACCCCCAAA+AGG | + | chr1.4:85031022-85031041 | None:intergenic | 50.0% | |
| TGGGGGTTCTTGGTCTCAAT+AGG | - | chr1.4:85031024-85031043 | MS.gene066068:CDS | 50.0% | |
| ! | ATTTGGAGCAGCAGGTGTTG+TGG | - | chr1.4:85032173-85032192 | MS.gene066068:intron | 50.0% |
| ! | CTGGAACTTGTGCTGGTGTT+TGG | - | chr1.4:85033521-85033540 | MS.gene066068:CDS | 50.0% |
| ! | GATGGTTTGGAATCTTCCCG+AGG | - | chr1.4:85032092-85032111 | MS.gene066068:CDS | 50.0% |
| ! | GGACTGTTCTTGGATGGACT+TGG | - | chr1.4:85031159-85031178 | MS.gene066068:intron | 50.0% |
| ! | GTGTTTGGGCGTGGGTTAAA+TGG | - | chr1.4:85033536-85033555 | MS.gene066068:CDS | 50.0% |
| ! | GTTGTTGTTGTTGGGTTCCC+AGG | - | chr1.4:85031181-85031200 | MS.gene066068:intron | 50.0% |
| ! | TGCACTGGGATTCCTTTTGG+GGG | - | chr1.4:85031007-85031026 | MS.gene066068:CDS | 50.0% |
| !! | AACTTCAATTTTGGGGGGGG+GGG | + | chr1.4:85031807-85031826 | None:intergenic | 50.0% |
| !! | AGTACACTCCTGGTCTTACC+GGG | - | chr1.4:85031078-85031097 | MS.gene066068:CDS | 50.0% |
| !! | GGATTCCTTTTGGGGGTTCT+TGG | - | chr1.4:85031014-85031033 | MS.gene066068:CDS | 50.0% |
| ATGCGGCTGCTGGTGGAATT+GGG | - | chr1.4:85031138-85031157 | MS.gene066068:intron | 55.0% | |
| CACGACACTCTCATGACCTC+GGG | + | chr1.4:85032111-85032130 | None:intergenic | 55.0% | |
| CAGCTATCAGGACACTGCGA+TGG | - | chr1.4:85032556-85032575 | MS.gene066068:intron | 55.0% | |
| GCATGATTCCCGGTAAGACC+AGG | + | chr1.4:85031089-85031108 | None:intergenic | 55.0% | |
| GGCTCCACATCCATGCTCAT+GGG | - | chr1.4:85033580-85033599 | MS.gene066068:CDS | 55.0% | |
| GGTCTTACCGGGAATCATGC+CGG | - | chr1.4:85031089-85031108 | MS.gene066068:CDS | 55.0% | |
| GGTTAACCCGGCATGATTCC+CGG | + | chr1.4:85031099-85031118 | None:intergenic | 55.0% | |
| GTCTTACCGGGAATCATGCC+GGG | - | chr1.4:85031090-85031109 | MS.gene066068:CDS | 55.0% | |
| GTGCCTCAACCCCAGTTGAT+TGG | + | chr1.4:85033438-85033457 | None:intergenic | 55.0% | |
| TATCAGGACACTGCGATGGG+AGG | - | chr1.4:85032560-85032579 | MS.gene066068:intron | 55.0% | |
| TATGCGGCTGCTGGTGGAAT+TGG | - | chr1.4:85031137-85031156 | MS.gene066068:intron | 55.0% | |
| TGGCTCCACATCCATGCTCA+TGG | - | chr1.4:85033579-85033598 | MS.gene066068:CDS | 55.0% | |
| ! | AACTGGGGTTGAGGCACTTG+TGG | - | chr1.4:85033441-85033460 | MS.gene066068:CDS | 55.0% |
| ! | GGCGGTGGCATGATGTTTTC+TGG | - | chr1.4:85030958-85030977 | MS.gene066068:CDS | 55.0% |
| ! | TTGTGCTGGTGTTTGGGCGT+GGG | - | chr1.4:85033528-85033547 | MS.gene066068:CDS | 55.0% |
| !! | ACTTCAATTTTGGGGGGGGG+GGG | + | chr1.4:85031806-85031825 | None:intergenic | 55.0% |
| !! | CAGCAGTGAAATGGTGGTGG+CGG | - | chr1.4:85030923-85030942 | MS.gene066068:CDS | 55.0% |
| CCACCAGCAGCCGCATAAAG+CGG | + | chr1.4:85031134-85031153 | None:intergenic | 60.0% | |
| CGGCAGCAGTGAAATGGTGG+TGG | - | chr1.4:85030920-85030939 | MS.gene066068:CDS | 60.0% | |
| GCTGGTGGCTTCTTGTGGTG+AGG | - | chr1.4:85032220-85032239 | MS.gene066068:intron | 60.0% | |
| GGTGGCTTCTTGTGGTGAGG+TGG | - | chr1.4:85032223-85032242 | MS.gene066068:intron | 60.0% | |
| ! | ACTTGAGTGATGGGGGACGC+TGG | - | chr1.4:85032202-85032221 | MS.gene066068:intron | 60.0% |
| ! | CTTGTGCTGGTGTTTGGGCG+TGG | - | chr1.4:85033527-85033546 | MS.gene066068:CDS | 60.0% |
| ! | TGGGGGGTTGCTTTCGCTGT+TGG | - | chr1.4:85031292-85031311 | MS.gene066068:intron | 60.0% |
| !! | CTTCAATTTTGGGGGGGGGG+GGG | + | chr1.4:85031805-85031824 | None:intergenic | 60.0% |
| !! | TGGTGGCGGCAGAACAATCG+CGG | - | chr1.4:85030937-85030956 | MS.gene066068:CDS | 60.0% |
| !! | TTCAATTTTGGGGGGGGGGG+GGG | + | chr1.4:85031804-85031823 | None:intergenic | 60.0% |
| CCGCTTTATGCGGCTGCTGG+TGG | - | chr1.4:85031131-85031150 | MS.gene066068:intron | 65.0% | |
| CGGCGGCAGCAGTGAAATGG+TGG | - | chr1.4:85030917-85030936 | MS.gene066068:CDS | 65.0% | |
| GCATCCCGGAGCAGGAGAAG+TGG | - | chr1.4:85030894-85030913 | MS.gene066068:CDS | 65.0% | |
| GGGACGCTGGTGGCTTCTTG+TGG | - | chr1.4:85032215-85032234 | MS.gene066068:intron | 65.0% | |
| TCCCGGAGCAGGAGAAGTGG+CGG | - | chr1.4:85030897-85030916 | MS.gene066068:CDS | 65.0% | |
| TGGCGGCAGAACAATCGCGG+CGG | - | chr1.4:85030940-85030959 | MS.gene066068:CDS | 65.0% | |
| TGGCGGCGGCAGCAGTGAAA+TGG | - | chr1.4:85030914-85030933 | MS.gene066068:CDS | 65.0% | |
| ! | TGAGTGATGGGGGACGCTGG+TGG | - | chr1.4:85032205-85032224 | MS.gene066068:intron | 65.0% |
| ! | TGGCCGCTTTATGCGGCTGC+TGG | - | chr1.4:85031128-85031147 | MS.gene066068:intron | 65.0% |
| !! | TCAATTTTGGGGGGGGGGGG+GGG | + | chr1.4:85031803-85031822 | None:intergenic | 65.0% |
| CGCCGCCACTTCTCCTGCTC+CGG | + | chr1.4:85030902-85030921 | None:intergenic | 70.0% | |
| CGGAGCAGGAGAAGTGGCGG+CGG | - | chr1.4:85030900-85030919 | MS.gene066068:CDS | 70.0% | |
| CGGCAGAACAATCGCGGCGG+TGG | - | chr1.4:85030943-85030962 | MS.gene066068:CDS | 70.0% | |
| GCCGCCACTTCTCCTGCTCC+GGG | + | chr1.4:85030901-85030920 | None:intergenic | 70.0% | |
| !! | AATTTTGGGGGGGGGGGGGG+GGG | + | chr1.4:85031801-85031820 | None:intergenic | 70.0% |
| !! | CAATTTTGGGGGGGGGGGGG+GGG | + | chr1.4:85031802-85031821 | None:intergenic | 70.0% |
| !! | ATTTTGGGGGGGGGGGGGGG+GGG | + | chr1.4:85031800-85031819 | None:intergenic | 75.0% |
| !!! | TTTTGGGGGGGGGGGGGGGG+GGG | + | chr1.4:85031799-85031818 | None:intergenic | 80.0% |
| ! | TTTGGGGGGGGGGGGGGGGG+GGG | + | chr1.4:85031798-85031817 | None:intergenic | 85.0% |
| ! | TTGGGGGGGGGGGGGGGGGG+GGG | + | chr1.4:85031797-85031816 | None:intergenic | 90.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | + | chr1.4:85031796-85031815 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 85030893 | 85033612 | 85030893 | ID=MS.gene066068 |
| chr1.4 | mRNA | 85030893 | 85033612 | 85030893 | ID=MS.gene066068.t1;Parent=MS.gene066068 |
| chr1.4 | exon | 85033252 | 85033612 | 85033252 | ID=MS.gene066068.t1.exon1;Parent=MS.gene066068.t1 |
| chr1.4 | CDS | 85033252 | 85033612 | 85033252 | ID=cds.MS.gene066068.t1;Parent=MS.gene066068.t1 |
| chr1.4 | exon | 85033149 | 85033219 | 85033149 | ID=MS.gene066068.t1.exon2;Parent=MS.gene066068.t1 |
| chr1.4 | CDS | 85033149 | 85033219 | 85033149 | ID=cds.MS.gene066068.t1;Parent=MS.gene066068.t1 |
| chr1.4 | exon | 85032269 | 85032452 | 85032269 | ID=MS.gene066068.t1.exon3;Parent=MS.gene066068.t1 |
| chr1.4 | CDS | 85032269 | 85032452 | 85032269 | ID=cds.MS.gene066068.t1;Parent=MS.gene066068.t1 |
| chr1.4 | exon | 85031904 | 85032148 | 85031904 | ID=MS.gene066068.t1.exon4;Parent=MS.gene066068.t1 |
| chr1.4 | CDS | 85031904 | 85032148 | 85031904 | ID=cds.MS.gene066068.t1;Parent=MS.gene066068.t1 |
| chr1.4 | exon | 85031704 | 85031821 | 85031704 | ID=MS.gene066068.t1.exon5;Parent=MS.gene066068.t1 |
| chr1.4 | CDS | 85031704 | 85031821 | 85031704 | ID=cds.MS.gene066068.t1;Parent=MS.gene066068.t1 |
| chr1.4 | exon | 85030893 | 85031126 | 85030893 | ID=MS.gene066068.t1.exon6;Parent=MS.gene066068.t1 |
| chr1.4 | CDS | 85030893 | 85031126 | 85030893 | ID=cds.MS.gene066068.t1;Parent=MS.gene066068.t1 |
| Gene Sequence |
| Protein sequence |
