AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene066932


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066932.t1 MTR_8g046180 97.799 318 7 0 1 318 1 318 0.0 641
MS.gene066932.t1 MTR_8g046180 96.853 286 9 0 1 286 1 286 0.0 572
MS.gene066932.t1 MTR_8g046180 96.818 220 7 0 1 220 1 220 8.62e-159 442
MS.gene066932.t1 MTR_6g004030 42.708 192 110 0 127 318 110 301 4.23e-55 181
MS.gene066932.t1 MTR_6g004030 42.222 135 78 0 127 261 110 244 4.14e-34 125
MS.gene066932.t1 MTR_8g446720 74.000 50 12 1 269 318 8 56 3.13e-17 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066932.t1 AT4G29400 73.558 208 54 1 112 318 95 302 2.69e-112 328
MS.gene066932.t1 AT5G08400 43.229 192 109 0 127 318 109 300 5.34e-55 181
MS.gene066932.t1 AT5G08400 43.229 192 109 0 127 318 142 333 1.40e-54 181

Find 62 sgRNAs with CRISPR-Local

Find 404 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAGTATTTCAGCAAATTC+TGG 0.215370 8.4:+55185751 None:intergenic
GAAGAAGGAAAAGGTGTAAA+AGG 0.229245 8.4:+55186111 None:intergenic
AAGTGATTGTTACGGGAAAA+AGG 0.270164 8.4:+55186066 None:intergenic
ACATCAGAGGATTCAGGATA+TGG 0.309372 8.4:-55180033 MS.gene066932:CDS
ACCAAGTTACGATTATATTC+AGG 0.316714 8.4:-55180491 MS.gene066932:CDS
ACAACTTACTTGCATGTTCA+TGG 0.330028 8.4:+55180654 None:intergenic
GATTTAACATCAGAGGATTC+AGG 0.338011 8.4:-55180039 MS.gene066932:CDS
GTGGAGAAGAATTTGAGAAT+TGG 0.339234 8.4:-55180068 MS.gene066932:CDS
TGATATAACAGGATAGATAT+TGG 0.346310 8.4:-55180300 MS.gene066932:intron
TTATTAAATGACACTTTCAT+TGG 0.357016 8.4:+55185157 None:intergenic
GAGTAGAAAAGGAGGTATAT+AGG 0.369542 8.4:+55186035 None:intergenic
TTTGATGAAGTGATTGTTAC+GGG 0.375482 8.4:+55186059 None:intergenic
CCAGAATTTGCTGAAATACT+TGG 0.378222 8.4:-55185751 MS.gene066932:CDS
ACATAACAATGTCGATGTTC+TGG 0.388973 8.4:+55186002 None:intergenic
AAGACAACTTAGCTCGAATA+TGG 0.395194 8.4:-55180417 MS.gene066932:intron
ACGCGAGAATTCAAACAGTT+TGG 0.400615 8.4:-55185962 MS.gene066932:CDS
ATCAAAACATCTAGAATCAA+TGG 0.409600 8.4:+55180267 None:intergenic
AAAATACTCCACACAAAGAC+TGG 0.415066 8.4:-55185190 MS.gene066932:CDS
AGAATTTGAGAATTGGAAAG+AGG 0.431631 8.4:-55180061 MS.gene066932:CDS
GGTGATGGCAGAAGATATTC+AGG 0.433237 8.4:-55185820 MS.gene066932:CDS
CCCTGAATATAATCGTAACT+TGG 0.440268 8.4:+55180490 None:intergenic
GTACCTGAGAATGATGATTA+TGG 0.446888 8.4:-55185907 MS.gene066932:CDS
TCGATGTTCTGGCATTTCTC+AGG 0.448134 8.4:+55186013 None:intergenic
GATATAACAGGATAGATATT+GGG 0.451457 8.4:-55180299 MS.gene066932:intron
TCAGGTGGAGGACCATATAA+AGG 0.453495 8.4:-55185802 MS.gene066932:CDS
ATTTGATGAAGTGATTGTTA+CGG 0.461943 8.4:+55186058 None:intergenic
CCAAGTTACGATTATATTCA+GGG 0.463616 8.4:-55180490 MS.gene066932:CDS
CTCCACACAAAGACTGGATC+AGG 0.466440 8.4:-55185184 MS.gene066932:CDS
ATATAAAGGCGGGGATGAAA+AGG 0.474783 8.4:-55185788 MS.gene066932:CDS
TTTGGAGCATGTAATGGTAA+TGG 0.476210 8.4:+55186089 None:intergenic
ATTCGAGCATGGCACATTGT+AGG 0.492114 8.4:-55180697 MS.gene066932:CDS
CCACCATAATCATCATTCTC+AGG 0.494562 8.4:+55185904 None:intergenic
GATATTATTGATGTAGATGA+AGG 0.500419 8.4:-55185853 MS.gene066932:CDS
GCATTTCTCAGGAGTAGAAA+AGG 0.502576 8.4:+55186024 None:intergenic
GAATTTGCTGAAATACTTGG+TGG 0.508733 8.4:-55185748 MS.gene066932:CDS
ACTCTGGACTGTGCCTTCTC+CGG 0.509116 8.4:+55185712 None:intergenic
GGGATCAAGCAAGTAGTGTT+TGG 0.510754 8.4:-55180090 MS.gene066932:CDS
TGGTGGTTATCTAGATGATC+CGG 0.512558 8.4:-55185731 MS.gene066932:CDS
CATGTAATGGTAATGGAAGA+AGG 0.514454 8.4:+55186096 None:intergenic
AAGAAGGAAAAGGTGTAAAA+GGG 0.522013 8.4:+55186112 None:intergenic
GTGGAGGACCATATAAAGGC+GGG 0.527561 8.4:-55185798 MS.gene066932:CDS
AAAAGGTTTGGAGCATGTAA+TGG 0.540169 8.4:+55186083 None:intergenic
TTACAACATTGGGGATCTTG+AGG 0.541473 8.4:-55180443 MS.gene066932:CDS
CCAATGTTGTAAAATGTAGT+TGG 0.552417 8.4:+55180454 None:intergenic
GGCAGAAGATATTCAGGTGG+AGG 0.560514 8.4:-55185814 MS.gene066932:CDS
CTCCTGATCCAGTCTTTGTG+TGG 0.562273 8.4:+55185182 None:intergenic
ATCAAGCAAGTAGTGTTTGG+TGG 0.565132 8.4:-55180087 MS.gene066932:CDS
GAAAGAGGATTTAACATCAG+AGG 0.565258 8.4:-55180046 MS.gene066932:CDS
ATGGTAATGGAAGAAGGAAA+AGG 0.566706 8.4:+55186102 None:intergenic
TTGTTATGTAGTGCTAGAAG+TGG 0.566730 8.4:-55185988 MS.gene066932:CDS
CTTTGCAGGCTATTCGAGCA+TGG 0.569213 8.4:-55180708 MS.gene066932:intron
TGGCACATTGTAGGACGACT+TGG 0.571804 8.4:-55180688 MS.gene066932:CDS
CACATTGTAGGACGACTTGG+AGG 0.594434 8.4:-55180685 MS.gene066932:CDS
TTATCTAGATGATCCGGAGA+AGG 0.610544 8.4:-55185725 MS.gene066932:CDS
GTAGATGAAGGACAAGATGA+TGG 0.636384 8.4:-55185841 MS.gene066932:CDS
CCTGAGAATGATGATTATGG+TGG 0.658096 8.4:-55185904 MS.gene066932:CDS
GAAGGACAAGATGATGGTGA+TGG 0.665835 8.4:-55185835 MS.gene066932:CDS
TTTCTCAGGAGTAGAAAAGG+AGG 0.674623 8.4:+55186027 None:intergenic
GGTGGAGGACCATATAAAGG+CGG 0.683885 8.4:-55185799 MS.gene066932:CDS
TGGAGGACCATATAAAGGCG+GGG 0.705810 8.4:-55185797 MS.gene066932:CDS
GATGGCAGAAGATATTCAGG+TGG 0.711832 8.4:-55185817 MS.gene066932:CDS
CTTTGATATAGACATCAATG+AGG 0.723579 8.4:-55185938 MS.gene066932:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATCAATATAGATATTTA+TGG + chr8.4:55183090-55183109 None:intergenic 10.0%
!! ATATCAATATAGATATTTAT+GGG + chr8.4:55183089-55183108 None:intergenic 10.0%
!!! AATTTTTTTTAAATATGATG+TGG + chr8.4:55185128-55185147 None:intergenic 10.0%
!! AAAATTCACTATAAATAGAA+AGG + chr8.4:55185561-55185580 None:intergenic 15.0%
!! AATAATTTGATTAATCATAG+AGG + chr8.4:55184503-55184522 None:intergenic 15.0%
!! AATATCTATATTGATATTAG+AGG - chr8.4:55183092-55183111 MS.gene066932:intron 15.0%
!! ATAGAAATAAGCATTTAAAT+AGG - chr8.4:55181646-55181665 MS.gene066932:intron 15.0%
!! ATTAATCCAATTAATTGATT+TGG - chr8.4:55186005-55186024 MS.gene066932:CDS 15.0%
!! TAAATAGAAAGTTAGAAATA+TGG - chr8.4:55182932-55182951 MS.gene066932:intron 15.0%
!!! ATTTATTTTTGTGATATAAC+AGG - chr8.4:55185832-55185851 MS.gene066932:CDS 15.0%
!!! ATTTTTCAAACTCATATATA+TGG - chr8.4:55185272-55185291 MS.gene066932:intron 15.0%
!!! TTAACTTCTTATGTTTTTTA+AGG - chr8.4:55181618-55181637 MS.gene066932:intron 15.0%
!! AAAAAGCCAAATCAATTAAT+TGG + chr8.4:55186014-55186033 None:intergenic 20.0%
!! AACAATAATCATATGGTTTA+GGG - chr8.4:55181929-55181948 MS.gene066932:intron 20.0%
!! AATCAAATTATTTCCTACAA+AGG - chr8.4:55184511-55184530 MS.gene066932:intron 20.0%
!! AGTACTTTGAATTACAATTA+TGG - chr8.4:55181787-55181806 MS.gene066932:intron 20.0%
!! ATCAAATTATTTCCTACAAA+GGG - chr8.4:55184512-55184531 MS.gene066932:intron 20.0%
!! ATCTAAGAACAATAATCATA+TGG - chr8.4:55181922-55181941 MS.gene066932:intron 20.0%
!! CAAAATATATCTGTGATATT+TGG + chr8.4:55185044-55185063 None:intergenic 20.0%
!! CAAGGAAATAAAATAATAAC+AGG + chr8.4:55181332-55181351 None:intergenic 20.0%
!! TCTGAAAAAAACATAAATTG+TGG + chr8.4:55182880-55182899 None:intergenic 20.0%
!! TTATTAAATGACACTTTCAT+TGG + chr8.4:55180989-55181008 None:intergenic 20.0%
!!! TAACTTAATTTCCTTTTATC+AGG - chr8.4:55181362-55181381 MS.gene066932:intron 20.0%
!!! TTTTAGATTATGATTATCTC+TGG - chr8.4:55181669-55181688 MS.gene066932:intron 20.0%
! AAAGAATAGAATTCTGTATC+AGG - chr8.4:55183262-55183281 MS.gene066932:intron 25.0%
! AAATAAAACTTGAAGCTGTA+GGG - chr8.4:55181731-55181750 MS.gene066932:intron 25.0%
! AAATGAGAGAGAAAGAAATT+TGG + chr8.4:55185536-55185555 None:intergenic 25.0%
! AACAAAATAAAGTCATAGGA+TGG + chr8.4:55185359-55185378 None:intergenic 25.0%
! AACTGAAACATAACAATGTA+TGG - chr8.4:55184777-55184796 MS.gene066932:intron 25.0%
! AATATCAAACTCAAGAGAAA+TGG + chr8.4:55184449-55184468 None:intergenic 25.0%
! AATTGTATTGCTTATAGAAC+TGG - chr8.4:55185589-55185608 MS.gene066932:intron 25.0%
! ACTATAAATGAAGCAGAATA+GGG + chr8.4:55183455-55183474 None:intergenic 25.0%
! AGCACATCATATTTATCTAA+TGG - chr8.4:55184653-55184672 MS.gene066932:intron 25.0%
! AGTAACTAAAATGATGCTAT+CGG - chr8.4:55181959-55181978 MS.gene066932:intron 25.0%
! ATAGTCTATAGAATGACTAA+CGG - chr8.4:55181445-55181464 MS.gene066932:intron 25.0%
! ATGCTACACATTTATATTGT+AGG - chr8.4:55185076-55185095 MS.gene066932:intron 25.0%
! ATTTGATGAAGTGATTGTTA+CGG + chr8.4:55180088-55180107 None:intergenic 25.0%
! CAAACTACTAATCCAATATT+GGG - chr8.4:55182704-55182723 MS.gene066932:intron 25.0%
! CACAATAATTTCATTCATGT+TGG - chr8.4:55184038-55184057 MS.gene066932:intron 25.0%
! GAACAATAATCATATGGTTT+AGG - chr8.4:55181928-55181947 MS.gene066932:intron 25.0%
! GATATAACAGGATAGATATT+GGG - chr8.4:55185844-55185863 MS.gene066932:CDS 25.0%
! GATATTATTGATGTAGATGA+AGG - chr8.4:55180290-55180309 MS.gene066932:CDS 25.0%
! GCAAAGGAAATAAACATATT+TGG + chr8.4:55184401-55184420 None:intergenic 25.0%
! GTACAACAAAATAAAGTCAT+AGG + chr8.4:55185363-55185382 None:intergenic 25.0%
! GTAGTTAATTAAACAAACAG+AGG + chr8.4:55185944-55185963 None:intergenic 25.0%
! TAAAATTTGACCAATCTTAC+TGG + chr8.4:55181228-55181247 None:intergenic 25.0%
! TACTATAAATGAAGCAGAAT+AGG + chr8.4:55183456-55183475 None:intergenic 25.0%
! TCAAACTACTAATCCAATAT+TGG - chr8.4:55182703-55182722 MS.gene066932:intron 25.0%
! TGAGTTTGAAAAATCAAATC+TGG + chr8.4:55185266-55185285 None:intergenic 25.0%
! TGATATAACAGGATAGATAT+TGG - chr8.4:55185843-55185862 MS.gene066932:CDS 25.0%
! TTAAAATCTGTCCTGATAAA+AGG + chr8.4:55181376-55181395 None:intergenic 25.0%
! TTAAGTTACATATCAGTACA+AGG + chr8.4:55181350-55181369 None:intergenic 25.0%
!! AACTACATTTTACAACATTG+GGG - chr8.4:55185691-55185710 MS.gene066932:intron 25.0%
!! AGAGATTTTATTCATAGCAA+AGG + chr8.4:55184417-55184436 None:intergenic 25.0%
!! ATCAAAACATCTAGAATCAA+TGG + chr8.4:55185879-55185898 None:intergenic 25.0%
!! ATTGATTTCTTAGTTTCCAT+TGG - chr8.4:55183554-55183573 MS.gene066932:intron 25.0%
!! ATTGTTCTCCTAGTTTATTT+TGG - chr8.4:55184349-55184368 MS.gene066932:intron 25.0%
!! CAACTACATTTTACAACATT+GGG - chr8.4:55185690-55185709 MS.gene066932:intron 25.0%
!! GGAATATTTTCCCATTAATA+TGG - chr8.4:55183761-55183780 MS.gene066932:intron 25.0%
!! TAAATTTTCAACAACGTGAA+AGG + chr8.4:55180831-55180850 None:intergenic 25.0%
!! TAACAAAGCATTAAGAATGA+AGG + chr8.4:55185772-55185791 None:intergenic 25.0%
!! TGTAAATTTTTAAACCACGT+GGG - chr8.4:55184697-55184716 MS.gene066932:intron 25.0%
!!! ATGCAAAAAAAAGTGTCATA+AGG + chr8.4:55182965-55182984 None:intergenic 25.0%
!!! CTCATAACAGTTTTAACTTT+TGG - chr8.4:55182249-55182268 MS.gene066932:intron 25.0%
!!! TGTTTTTTGATAGCTTTGTT+GGG - chr8.4:55186033-55186052 MS.gene066932:CDS 25.0%
!!! TTAGGAAGTTTTGTTGAATT+TGG - chr8.4:55185410-55185429 MS.gene066932:intron 25.0%
!!! TTGTTTTTTGATAGCTTTGT+TGG - chr8.4:55186032-55186051 MS.gene066932:CDS 25.0%
!!! TTTCGTTTCCATTGTTTTAA+GGG - chr8.4:55180793-55180812 MS.gene066932:intron 25.0%
AAAAGATCTTCCTGTAACTA+CGG - chr8.4:55182764-55182783 MS.gene066932:intron 30.0%
AAACATCACCCTTAAAACAA+TGG + chr8.4:55180804-55180823 None:intergenic 30.0%
AAAGCTTATACTTCTTAGGT+AGG - chr8.4:55182307-55182326 MS.gene066932:intron 30.0%
AAATGTTCTTGTGATGATAC+AGG + chr8.4:55183584-55183603 None:intergenic 30.0%
AAGAGAGACTAAGAAAAAAC+AGG - chr8.4:55180927-55180946 MS.gene066932:intron 30.0%
AATTAAACAAACAGAGGAAG+TGG + chr8.4:55185938-55185957 None:intergenic 30.0%
ACAAACAATAGAAAACTGCA+TGG + chr8.4:55181086-55181105 None:intergenic 30.0%
ACAAACATGTATTGAGAGAA+AGG + chr8.4:55185985-55186004 None:intergenic 30.0%
ACCAAGTTACGATTATATTC+AGG - chr8.4:55185652-55185671 MS.gene066932:intron 30.0%
ACTCAACAAAAATGTGAACA+TGG - chr8.4:55182361-55182380 MS.gene066932:intron 30.0%
AGAATAACAGAATACCTACA+TGG + chr8.4:55184989-55185008 None:intergenic 30.0%
AGAATTTGAGAATTGGAAAG+AGG - chr8.4:55186082-55186101 MS.gene066932:CDS 30.0%
AGTCTGTAATCAACAAATCA+TGG + chr8.4:55182161-55182180 None:intergenic 30.0%
ATCATCACAAGAACATTTAG+AGG - chr8.4:55183586-55183605 MS.gene066932:intron 30.0%
ATGACAAAAACTTCGTTATC+TGG - chr8.4:55183004-55183023 MS.gene066932:intron 30.0%
CAAACATGTATTGAGAGAAA+GGG + chr8.4:55185984-55186003 None:intergenic 30.0%
CAATAATAGAGCTACACTAA+TGG + chr8.4:55181400-55181419 None:intergenic 30.0%
CATGAAAGCTTATACTTCTT+AGG - chr8.4:55182303-55182322 MS.gene066932:intron 30.0%
CCAAGTTACGATTATATTCA+GGG - chr8.4:55185653-55185672 MS.gene066932:intron 30.0%
CCAATGTTGTAAAATGTAGT+TGG + chr8.4:55185692-55185711 None:intergenic 30.0%
CTATAAATGAAGCAGAATAG+GGG + chr8.4:55183454-55183473 None:intergenic 30.0%
CTTTGATATAGACATCAATG+AGG - chr8.4:55180205-55180224 MS.gene066932:intron 30.0%
GAAATAAAACTTGAAGCTGT+AGG - chr8.4:55181730-55181749 MS.gene066932:intron 30.0%
GATAGAAGCCTCATATATAA+GGG + chr8.4:55182815-55182834 None:intergenic 30.0%
GCTATTTACAGATATTACAG+AGG + chr8.4:55183653-55183672 None:intergenic 30.0%
GCTTATGAAGAACAAGATAA+AGG + chr8.4:55184013-55184032 None:intergenic 30.0%
GTAACTAAAATGATGCTATC+GGG - chr8.4:55181960-55181979 MS.gene066932:intron 30.0%
TAACTAAAATGATGCTATCG+GGG - chr8.4:55181961-55181980 MS.gene066932:intron 30.0%
TAAGTAATAACGACTAGAGT+AGG - chr8.4:55181486-55181505 MS.gene066932:intron 30.0%
TAATTTACACACAGAAAGAC+TGG - chr8.4:55182100-55182119 MS.gene066932:intron 30.0%
TACTGAATCTTAACTTACCA+AGG + chr8.4:55183206-55183225 None:intergenic 30.0%
TAGAATGTAGAAATGTACAG+CGG - chr8.4:55181165-55181184 MS.gene066932:intron 30.0%
TATACTTGCAAGTAGAAATG+AGG + chr8.4:55182135-55182154 None:intergenic 30.0%
TCATTTATAGTAGACCTACA+GGG - chr8.4:55183464-55183483 MS.gene066932:intron 30.0%
TCATTTCTACTTGCAAGTAT+AGG - chr8.4:55182134-55182153 MS.gene066932:intron 30.0%
TGACGAATTCAGTGTATTTA+AGG - chr8.4:55181566-55181585 MS.gene066932:intron 30.0%
TTACCAAGGAAAAGATTCTA+AGG + chr8.4:55183192-55183211 None:intergenic 30.0%
TTCATTTATAGTAGACCTAC+AGG - chr8.4:55183463-55183482 MS.gene066932:intron 30.0%
TTCTGGATCCAAAATAAACT+AGG + chr8.4:55184360-55184379 None:intergenic 30.0%
TTTAATCTTCGTATCGTAGT+TGG + chr8.4:55180878-55180897 None:intergenic 30.0%
TTTCATAATTTCTTTCCCAC+TGG - chr8.4:55181249-55181268 MS.gene066932:intron 30.0%
TTTGATGAAGTGATTGTTAC+GGG + chr8.4:55180087-55180106 None:intergenic 30.0%
! AAAAGGAAGTTGATCAGTTA+TGG + chr8.4:55183978-55183997 None:intergenic 30.0%
! AAAGGCGTATTTGAAGTAAA+AGG + chr8.4:55183995-55184014 None:intergenic 30.0%
! AAGAAGGAAAAGGTGTAAAA+GGG + chr8.4:55180034-55180053 None:intergenic 30.0%
! AGAAAGAAATTTGGTTTCCA+TGG + chr8.4:55185527-55185546 None:intergenic 30.0%
! AGCAGTTGATTCAATTAAAC+TGG - chr8.4:55180576-55180595 MS.gene066932:intron 30.0%
! ATCTATTTTACCACCAATGT+AGG + chr8.4:55183686-55183705 None:intergenic 30.0%
! CAGAATTTAGGATAACAAGA+AGG - chr8.4:55183728-55183747 MS.gene066932:intron 30.0%
! CATTAGTGTAGCTCTATTAT+TGG - chr8.4:55181398-55181417 MS.gene066932:intron 30.0%
! CCAACTACATTTTACAACAT+TGG - chr8.4:55185689-55185708 MS.gene066932:intron 30.0%
! CTAAGAAGTATAAGCTTTCA+TGG + chr8.4:55182305-55182324 None:intergenic 30.0%
! CTGTAAATTTTTAAACCACG+TGG - chr8.4:55184696-55184715 MS.gene066932:intron 30.0%
! CTTCTTGTTATCCTAAATTC+TGG + chr8.4:55183730-55183749 None:intergenic 30.0%
! GTAGACATTTGTTAGACAAA+AGG + chr8.4:55183517-55183536 None:intergenic 30.0%
! TAGAAAACACGTTTAGAACT+AGG + chr8.4:55182837-55182856 None:intergenic 30.0%
! TGAATTTTACAATGCTCCAT+TGG - chr8.4:55185297-55185316 MS.gene066932:intron 30.0%
! TGCTGTGTGAAGAATTTTTA+AGG + chr8.4:55184611-55184630 None:intergenic 30.0%
! TGTATGTTTTCTTAAGCTTC+TGG - chr8.4:55183870-55183889 MS.gene066932:intron 30.0%
! TGTTTCTGCACCATATTAAT+GGG + chr8.4:55183774-55183793 None:intergenic 30.0%
! TTCACATTTTTGTTGAGTGT+GGG + chr8.4:55182359-55182378 None:intergenic 30.0%
! TTGGTGGTAAAATAGATCAT+TGG - chr8.4:55183689-55183708 MS.gene066932:intron 30.0%
!! CTTTCGTTTCCATTGTTTTA+AGG - chr8.4:55180792-55180811 MS.gene066932:intron 30.0%
!! TAAGTTGGTTACCATACATT+TGG - chr8.4:55183952-55183971 MS.gene066932:intron 30.0%
!! TAATATGAGGGTATCATTGT+AGG - chr8.4:55184245-55184264 MS.gene066932:intron 30.0%
!! TTAGTCTTATACATCAGTAG+TGG - chr8.4:55180743-55180762 MS.gene066932:intron 30.0%
!! TTGTTTCTGCACCATATTAA+TGG + chr8.4:55183775-55183794 None:intergenic 30.0%
!!! TGAAGTTGTTGACTTAGTTT+TGG + chr8.4:55183799-55183818 None:intergenic 30.0%
!!! TTTTAACTTTTGGCCTATTC+TGG - chr8.4:55182259-55182278 MS.gene066932:intron 30.0%
!!! TTTTCCGGTTGATTTGATTT+TGG - chr8.4:55180521-55180540 MS.gene066932:intron 30.0%
AAAAACATTTCCGGTTCAAC+TGG + chr8.4:55180505-55180524 None:intergenic 35.0%
AAAATACTCCACACAAAGAC+TGG - chr8.4:55180953-55180972 MS.gene066932:intron 35.0%
AAGACAACTTAGCTCGAATA+TGG - chr8.4:55185726-55185745 MS.gene066932:CDS 35.0%
AAGTGATTGTTACGGGAAAA+AGG + chr8.4:55180080-55180099 None:intergenic 35.0%
AAGTTCAGAAGAGTAACCAA+TGG - chr8.4:55183302-55183321 MS.gene066932:intron 35.0%
ACAACTTACTTGCATGTTCA+TGG + chr8.4:55185492-55185511 None:intergenic 35.0%
ACAGTGGTTATGAACCATTA+TGG - chr8.4:55184274-55184293 MS.gene066932:intron 35.0%
ACATAACAATGTCGATGTTC+TGG + chr8.4:55180144-55180163 None:intergenic 35.0%
ACTACTAATCCAATATTGGG+AGG - chr8.4:55182707-55182726 MS.gene066932:intron 35.0%
AGTATGAAGTAGGGAAATAG+TGG + chr8.4:55184889-55184908 None:intergenic 35.0%
ATCAACCGGAAAAACATTTC+CGG + chr8.4:55180514-55180533 None:intergenic 35.0%
ATCAGTTATGGCCAAATGTA+TGG + chr8.4:55183966-55183985 None:intergenic 35.0%
ATTCACATAGCCAGTAAGAT+TGG - chr8.4:55181215-55181234 MS.gene066932:intron 35.0%
ATTGTTACGGGAAAAAGGTT+TGG + chr8.4:55180075-55180094 None:intergenic 35.0%
ATTTGTGAAGATTGGCAGTA+CGG + chr8.4:55182445-55182464 None:intergenic 35.0%
CACCAATGTAGGAATCAAAA+CGG + chr8.4:55183675-55183694 None:intergenic 35.0%
CCAAGTATTTCAGCAAATTC+TGG + chr8.4:55180395-55180414 None:intergenic 35.0%
CCCTGAATATAATCGTAACT+TGG + chr8.4:55185656-55185675 None:intergenic 35.0%
CGGAGGAATTGAAGTTATTA+TGG - chr8.4:55181185-55181204 MS.gene066932:intron 35.0%
CTACTAATCCAATATTGGGA+GGG - chr8.4:55182708-55182727 MS.gene066932:intron 35.0%
CTCATTGACCAACTTTCATA+CGG - chr8.4:55184096-55184115 MS.gene066932:intron 35.0%
CTCTTCGTTTAGACTTTAGA+GGG - chr8.4:55183384-55183403 MS.gene066932:intron 35.0%
CTCTTGCATCATATTGTGTT+AGG + chr8.4:55184745-55184764 None:intergenic 35.0%
GAAAGAGGATTTAACATCAG+AGG - chr8.4:55186097-55186116 MS.gene066932:CDS 35.0%
GACTTGGGGAATACAAAAAA+TGG - chr8.4:55183144-55183163 MS.gene066932:intron 35.0%
GATTTAACATCAGAGGATTC+AGG - chr8.4:55186104-55186123 MS.gene066932:CDS 35.0%
GCAACCAAAATCAAATCAAC+CGG + chr8.4:55180528-55180547 None:intergenic 35.0%
GGATAGAAGCCTCATATATA+AGG + chr8.4:55182816-55182835 None:intergenic 35.0%
GGGAAAATATTCCATAGTTG+AGG + chr8.4:55183754-55183773 None:intergenic 35.0%
GTACCTGAGAATGATGATTA+TGG - chr8.4:55180236-55180255 MS.gene066932:intron 35.0%
GTAGGACATAAATACAACGT+TGG - chr8.4:55181286-55181305 MS.gene066932:intron 35.0%
GTATGAAGTAGGGAAATAGT+GGG + chr8.4:55184888-55184907 None:intergenic 35.0%
GTGGAGAAGAATTTGAGAAT+TGG - chr8.4:55186075-55186094 MS.gene066932:CDS 35.0%
GTTATGAGCTACAAAATCAG+TGG + chr8.4:55182237-55182256 None:intergenic 35.0%
TACTGCCAATCTTCACAAAT+TGG - chr8.4:55182445-55182464 MS.gene066932:intron 35.0%
TATCTCTGGTATAACTTCTC+TGG - chr8.4:55181683-55181702 MS.gene066932:intron 35.0%
TCAGATCGAAATCGTAATTG+AGG + chr8.4:55182650-55182669 None:intergenic 35.0%
TCATTGACCAACTTTCATAC+GGG - chr8.4:55184097-55184116 MS.gene066932:intron 35.0%
TCATTGTAGGTGTTAAACAG+TGG - chr8.4:55184258-55184277 MS.gene066932:intron 35.0%
TCGTCTATTGCACTTATTTG+TGG - chr8.4:55183059-55183078 MS.gene066932:intron 35.0%
TGATGATACAGGAAATCCAA+TGG + chr8.4:55183573-55183592 None:intergenic 35.0%
TGGAATCTATCTTCATACGA+GGG - chr8.4:55180763-55180782 MS.gene066932:intron 35.0%
TGGTTATGAACCATTATGGA+GGG - chr8.4:55184278-55184297 MS.gene066932:intron 35.0%
TGTTGAATTTGGATCTTTGC+AGG - chr8.4:55185421-55185440 MS.gene066932:intron 35.0%
TTAACTAGACAGTTAGGAGT+TGG + chr8.4:55183431-55183450 None:intergenic 35.0%
TTGGGGAATACAAAAAATGG+TGG - chr8.4:55183147-55183166 MS.gene066932:intron 35.0%
TTGTTATGTAGTGCTAGAAG+TGG - chr8.4:55180155-55180174 MS.gene066932:intron 35.0%
! AAAAGGTTTGGAGCATGTAA+TGG + chr8.4:55180063-55180082 None:intergenic 35.0%
! ACAGTGAGAAGTATGAAGTA+GGG + chr8.4:55184898-55184917 None:intergenic 35.0%
! CATCCTTAGAATCTTTTCCT+TGG - chr8.4:55183186-55183205 MS.gene066932:intron 35.0%
! GAAGAAGGAAAAGGTGTAAA+AGG + chr8.4:55180035-55180054 None:intergenic 35.0%
! GAGTAGAAAAGGAGGTATAT+AGG + chr8.4:55180111-55180130 None:intergenic 35.0%
! GTGAATGATTGAGTTGTAAC+CGG + chr8.4:55183354-55183373 None:intergenic 35.0%
! GTGGGGTACTAATAATATGA+GGG - chr8.4:55184233-55184252 MS.gene066932:intron 35.0%
! GTTCACATTTTTGTTGAGTG+TGG + chr8.4:55182360-55182379 None:intergenic 35.0%
! TGTAGAGATGAGGTATTTAG+AGG + chr8.4:55184940-55184959 None:intergenic 35.0%
! TGTGGGGTACTAATAATATG+AGG - chr8.4:55184232-55184251 MS.gene066932:intron 35.0%
! TTCAATTGAAACTAGTCTCG+TGG + chr8.4:55182036-55182055 None:intergenic 35.0%
! TTGAACCGGAAATGTTTTTC+CGG - chr8.4:55180506-55180525 MS.gene066932:CDS 35.0%
! TTTGGAGCATGTAATGGTAA+TGG + chr8.4:55180057-55180076 None:intergenic 35.0%
! TTTTGTTCTGCTCTTGACTT+GGG - chr8.4:55183129-55183148 MS.gene066932:intron 35.0%
!! ACGAGATTAGTCTCAAGTTA+TGG - chr8.4:55183896-55183915 MS.gene066932:intron 35.0%
!! ATGGTAATGGAAGAAGGAAA+AGG + chr8.4:55180044-55180063 None:intergenic 35.0%
!! CATGTAATGGTAATGGAAGA+AGG + chr8.4:55180050-55180069 None:intergenic 35.0%
!! CCAGAATTTGCTGAAATACT+TGG - chr8.4:55180392-55180411 MS.gene066932:intron 35.0%
!! GAATTTGCTGAAATACTTGG+TGG - chr8.4:55180395-55180414 MS.gene066932:intron 35.0%
!! GAGCTTGATTAATTTGCAGA+TGG - chr8.4:55180904-55180923 MS.gene066932:intron 35.0%
!!! AAGTTGATGTCTTTTGCCAA+TGG + chr8.4:55185316-55185335 None:intergenic 35.0%
!!! CGATGTTTTAAAAAGCAGAC+CGG + chr8.4:55180712-55180731 None:intergenic 35.0%
!!! CGGTCTGCTTTTTAAAACAT+CGG - chr8.4:55180710-55180729 MS.gene066932:intron 35.0%
!!! GTGATGGATTTTTTGACAAC+TGG + chr8.4:55182477-55182496 None:intergenic 35.0%
AAAGAACTCTCCCTCCATAA+TGG + chr8.4:55184291-55184310 None:intergenic 40.0%
AACAGATTGGGACCGTTATT+AGG - chr8.4:55183034-55183053 MS.gene066932:intron 40.0%
AAGGGAATCATGTAGAGATG+AGG + chr8.4:55184950-55184969 None:intergenic 40.0%
AAGTACCCATAGAGATGTAG+TGG - chr8.4:55181855-55181874 MS.gene066932:intron 40.0%
AATAACGACTAGAGTAGGAG+AGG - chr8.4:55181491-55181510 MS.gene066932:intron 40.0%
AATGTAGAAATGTACAGCGG+AGG - chr8.4:55181168-55181187 MS.gene066932:intron 40.0%
ACACTCAGCAAAAATAGAGC+AGG - chr8.4:55183228-55183247 MS.gene066932:intron 40.0%
ACAGATTGGGACCGTTATTA+GGG - chr8.4:55183035-55183054 MS.gene066932:intron 40.0%
ACATCAGAGGATTCAGGATA+TGG - chr8.4:55186110-55186129 MS.gene066932:CDS 40.0%
ACCAACTTAAGCATCATGAC+TGG + chr8.4:55183941-55183960 None:intergenic 40.0%
ACCAGTCATGATGCTTAAGT+TGG - chr8.4:55183937-55183956 MS.gene066932:intron 40.0%
ACCATGTGTTCTCACACAAA+TGG + chr8.4:55182736-55182755 None:intergenic 40.0%
ACGCGAGAATTCAAACAGTT+TGG - chr8.4:55180181-55180200 MS.gene066932:intron 40.0%
AGAAACTAAGAGAACCCTGT+AGG + chr8.4:55183481-55183500 None:intergenic 40.0%
AGAACATTTAGAGGCAGTTC+TGG - chr8.4:55183595-55183614 MS.gene066932:intron 40.0%
AGGACTCACATTTCCAGATT+GGG + chr8.4:55184123-55184142 None:intergenic 40.0%
AGGGTTCTCTTAGTTTCTGT+AGG - chr8.4:55183483-55183502 MS.gene066932:intron 40.0%
AGTACCCATAGAGATGTAGT+GGG - chr8.4:55181856-55181875 MS.gene066932:intron 40.0%
ATAGATGACGTTGCTTACTC+TGG + chr8.4:55180450-55180469 None:intergenic 40.0%
ATATAAAGGCGGGGATGAAA+AGG - chr8.4:55180355-55180374 MS.gene066932:intron 40.0%
ATCAAGCAAGTAGTGTTTGG+TGG - chr8.4:55186056-55186075 MS.gene066932:CDS 40.0%
ATCCAGAATTCCTGCATAAG+GGG - chr8.4:55184372-55184391 MS.gene066932:intron 40.0%
ATCTGGTAGTAGCAACAGAT+TGG - chr8.4:55183021-55183040 MS.gene066932:intron 40.0%
ATCTTCCTGTAACTACGGTT+GGG - chr8.4:55182769-55182788 MS.gene066932:intron 40.0%
ATGATCAGAACCAGTTGAAC+CGG - chr8.4:55180492-55180511 MS.gene066932:CDS 40.0%
ATGCAGTGTAGGTCAAAGAT+CGG + chr8.4:55182515-55182534 None:intergenic 40.0%
ATGCGATATATTGAGTGCTC+AGG - chr8.4:55181594-55181613 MS.gene066932:intron 40.0%
ATTCTGTATCAGGCAAGAAC+AGG - chr8.4:55183272-55183291 MS.gene066932:intron 40.0%
CAATAGACGACCCCTAATAA+CGG + chr8.4:55183049-55183068 None:intergenic 40.0%
CACAGCCAATTTGTGAAGAT+TGG + chr8.4:55182453-55182472 None:intergenic 40.0%
CCACCATAATCATCATTCTC+AGG + chr8.4:55180242-55180261 None:intergenic 40.0%
CCTCTTCGTTTAGACTTTAG+AGG - chr8.4:55183383-55183402 MS.gene066932:intron 40.0%
CCTGAGAATGATGATTATGG+TGG - chr8.4:55180239-55180258 MS.gene066932:intron 40.0%
GATCCAGAATTCCTGCATAA+GGG - chr8.4:55184371-55184390 MS.gene066932:intron 40.0%
GATGCACACATGCTTCAATT+AGG - chr8.4:55185392-55185411 MS.gene066932:intron 40.0%
GCATAGTCACTATCCACAAT+CGG + chr8.4:55182404-55182423 None:intergenic 40.0%
GCATTTCTCAGGAGTAGAAA+AGG + chr8.4:55180122-55180141 None:intergenic 40.0%
GGAACTAGCAAATGTGAAAC+TGG + chr8.4:55184554-55184573 None:intergenic 40.0%
GGACATAAATACAACGTTGG+TGG - chr8.4:55181289-55181308 MS.gene066932:intron 40.0%
GGGTTCTCTTAGTTTCTGTA+GGG - chr8.4:55183484-55183503 MS.gene066932:intron 40.0%
GGTCAATGAGTTCAAGACTT+CGG + chr8.4:55184086-55184105 None:intergenic 40.0%
GGTTCTCTTAGTTTCTGTAG+GGG - chr8.4:55183485-55183504 MS.gene066932:intron 40.0%
GTAGATGAAGGACAAGATGA+TGG - chr8.4:55180302-55180321 MS.gene066932:intron 40.0%
GTGGAATCTATCTTCATACG+AGG - chr8.4:55180762-55180781 MS.gene066932:intron 40.0%
GTGGTTATGAACCATTATGG+AGG - chr8.4:55184277-55184296 MS.gene066932:intron 40.0%
GTTCTCTTAGTTTCTGTAGG+GGG - chr8.4:55183486-55183505 MS.gene066932:intron 40.0%
TAAACTAACACATTCCCACG+TGG + chr8.4:55184714-55184733 None:intergenic 40.0%
TAACAAGAAGGCCTCAACTA+TGG - chr8.4:55183740-55183759 MS.gene066932:intron 40.0%
TAGGACTCACATTTCCAGAT+TGG + chr8.4:55184124-55184143 None:intergenic 40.0%
TAGGGGTTAACTAGACAGTT+AGG + chr8.4:55183437-55183456 None:intergenic 40.0%
TATGTGATCATTGCAGCATG+TGG + chr8.4:55185183-55185202 None:intergenic 40.0%
TATTTGGATTCCCCTTATGC+AGG + chr8.4:55184385-55184404 None:intergenic 40.0%
TCCTTTCACACTGGATTAAC+CGG - chr8.4:55183332-55183351 MS.gene066932:intron 40.0%
TCTCTGGCATAACTTCTTCA+GGG - chr8.4:55181699-55181718 MS.gene066932:intron 40.0%
TCTGGTAGTAGCAACAGATT+GGG - chr8.4:55183022-55183041 MS.gene066932:intron 40.0%
TGCTCATGAAGCCAGAATTT+AGG - chr8.4:55183716-55183735 MS.gene066932:intron 40.0%
TGGTGGTTATCTAGATGATC+CGG - chr8.4:55180412-55180431 MS.gene066932:intron 40.0%
TTACAACATTGGGGATCTTG+AGG - chr8.4:55185700-55185719 MS.gene066932:intron 40.0%
TTATCTAGATGATCCGGAGA+AGG - chr8.4:55180418-55180437 MS.gene066932:CDS 40.0%
TTCAAGTCACTTGTTCTGTC+AGG + chr8.4:55181517-55181536 None:intergenic 40.0%
TTCTCTGGCATAACTTCTTC+AGG - chr8.4:55181698-55181717 MS.gene066932:intron 40.0%
TTCTGTATCAGGCAAGAACA+GGG - chr8.4:55183273-55183292 MS.gene066932:intron 40.0%
TTGGGCACTAGAATAAAACC+TGG - chr8.4:55182787-55182806 MS.gene066932:intron 40.0%
TTGTTGACAGAGACCAGAAT+AGG + chr8.4:55182275-55182294 None:intergenic 40.0%
TTTCTCAGGAGTAGAAAAGG+AGG + chr8.4:55180119-55180138 None:intergenic 40.0%
TTTGTCATCCTCTTCAACCA+CGG - chr8.4:55180641-55180660 MS.gene066932:intron 40.0%
! AGAGATGAGGTATTTAGAGG+AGG + chr8.4:55184937-55184956 None:intergenic 40.0%
! GACAGTGAGAAGTATGAAGT+AGG + chr8.4:55184899-55184918 None:intergenic 40.0%
! GATTTGGTAACACCAGCAAT+CGG + chr8.4:55182002-55182021 None:intergenic 40.0%
! TTTGTTCTGCTCTTGACTTG+GGG - chr8.4:55183130-55183149 MS.gene066932:intron 40.0%
! TTTTCATCCCCGCCTTTATA+TGG + chr8.4:55180356-55180375 None:intergenic 40.0%
!! AGGGCTTTAGATTAGAACAG+AGG - chr8.4:55181750-55181769 MS.gene066932:intron 40.0%
!! CCTCTAAAGTCTAAACGAAG+AGG + chr8.4:55183386-55183405 None:intergenic 40.0%
!! GTTTTGTTCTGCTCTTGACT+TGG - chr8.4:55183128-55183147 MS.gene066932:intron 40.0%
!!! AGCCGTTTTGATTCCTACAT+TGG - chr8.4:55183670-55183689 MS.gene066932:intron 40.0%
!!! ATGGTGGATTTTCAGCTCAA+GGG - chr8.4:55180255-55180274 MS.gene066932:CDS 40.0%
!!! CGTTTTGATTCCTACATTGG+TGG - chr8.4:55183673-55183692 MS.gene066932:intron 40.0%
!!! TATGGTGGATTTTCAGCTCA+AGG - chr8.4:55180254-55180273 MS.gene066932:CDS 40.0%
AAATGGCACCCTCCCAATAT+TGG + chr8.4:55182719-55182738 None:intergenic 45.0%
AATCTGGAAATGCCAGCATC+AGG + chr8.4:55185250-55185269 None:intergenic 45.0%
ACCGGTTAATCCAGTGTGAA+AGG + chr8.4:55183336-55183355 None:intergenic 45.0%
ACCTGGAGCCCTTATATATG+AGG - chr8.4:55182804-55182823 MS.gene066932:intron 45.0%
AGATCGGCCATGGAAGATTT+CGG + chr8.4:55182499-55182518 None:intergenic 45.0%
AGTCTCCCACTACATCTCTA+TGG + chr8.4:55181864-55181883 None:intergenic 45.0%
ATCTGGAAATGCCAGCATCA+GGG + chr8.4:55185249-55185268 None:intergenic 45.0%
ATTCGAGCATGGCACATTGT+AGG - chr8.4:55185446-55185465 MS.gene066932:intron 45.0%
ATTGAAGCATGTGTGCATCG+TGG + chr8.4:55185391-55185410 None:intergenic 45.0%
CAGATTGGGACCGTTATTAG+GGG - chr8.4:55183036-55183055 MS.gene066932:intron 45.0%
CAGCAAGACTAATGCAGTGT+AGG + chr8.4:55182526-55182545 None:intergenic 45.0%
CGAAATCGTAATTGAGGACC+TGG + chr8.4:55182644-55182663 None:intergenic 45.0%
CTTCTAGGTCATGGCTCAAT+TGG + chr8.4:55180672-55180691 None:intergenic 45.0%
GAAAGGTTCCTATCTCAGTG+AGG + chr8.4:55184853-55184872 None:intergenic 45.0%
GACTCAGCATGTGAGACTAT+AGG + chr8.4:55184143-55184162 None:intergenic 45.0%
GAGGAGGATCACTGAATCAA+AGG + chr8.4:55184921-55184940 None:intergenic 45.0%
GATCTTCCTGTAACTACGGT+TGG - chr8.4:55182768-55182787 MS.gene066932:intron 45.0%
GATGGCAGAAGATATTCAGG+TGG - chr8.4:55180326-55180345 MS.gene066932:intron 45.0%
GCATCTGTGTAGTTCAAGTC+AGG - chr8.4:55183824-55183843 MS.gene066932:intron 45.0%
GCCATTTGTGTGAGAACACA+TGG - chr8.4:55182732-55182751 MS.gene066932:intron 45.0%
GGATCCAGAATTCCTGCATA+AGG - chr8.4:55184370-55184389 MS.gene066932:intron 45.0%
GGGATCAAGCAAGTAGTGTT+TGG - chr8.4:55186053-55186072 MS.gene066932:CDS 45.0%
GTCTCCCACTACATCTCTAT+GGG + chr8.4:55181863-55181882 None:intergenic 45.0%
GTGAAAGGAGAGTGATCCAT+TGG + chr8.4:55183321-55183340 None:intergenic 45.0%
GTTGTTCTTCTCTTCTGCCA+TGG - chr8.4:55185507-55185526 MS.gene066932:intron 45.0%
TATCAGGCAAGAACAGGGAA+AGG - chr8.4:55183278-55183297 MS.gene066932:intron 45.0%
TCAGGTGGAGGACCATATAA+AGG - chr8.4:55180341-55180360 MS.gene066932:intron 45.0%
TCATTGCAGCATGTGGAACA+TGG + chr8.4:55185176-55185195 None:intergenic 45.0%
TCCATCACCGAAATCTTCCA+TGG - chr8.4:55182489-55182508 MS.gene066932:intron 45.0%
TCGATGTTCTGGCATTTCTC+AGG + chr8.4:55180133-55180152 None:intergenic 45.0%
TGGAACATGGACAGGCATTT+CGG + chr8.4:55185163-55185182 None:intergenic 45.0%
TGTGAACATGGACATCAGTC+CGG - chr8.4:55182373-55182392 MS.gene066932:intron 45.0%
TTCCCCTTATGCAGGAATTC+TGG + chr8.4:55184377-55184396 None:intergenic 45.0%
! AGGAATTTTCTGTAGGGAGC+TGG - chr8.4:55184183-55184202 MS.gene066932:intron 45.0%
! ATTTCTTTCCCACTGGCTAG+TGG - chr8.4:55181256-55181275 MS.gene066932:intron 45.0%
! CAGGCGAGGAATTTTCTGTA+GGG - chr8.4:55184177-55184196 MS.gene066932:intron 45.0%
! GAAGGACAAGATGATGGTGA+TGG - chr8.4:55180308-55180327 MS.gene066932:intron 45.0%
! GGTGATGGCAGAAGATATTC+AGG - chr8.4:55180323-55180342 MS.gene066932:intron 45.0%
! TGAAGTAGGGAAATAGTGGG+TGG + chr8.4:55184885-55184904 None:intergenic 45.0%
! TGGATTTTCAGCTCAAGGGA+TGG - chr8.4:55180259-55180278 MS.gene066932:CDS 45.0%
!! AAAGAGTACCTTCCGATTGC+TGG - chr8.4:55181987-55182006 MS.gene066932:intron 45.0%
!! AAATAGTGGGTGGTCGGTTA+AGG + chr8.4:55184875-55184894 None:intergenic 45.0%
!! CATTTAGAGGCAGTTCTGGA+TGG - chr8.4:55183599-55183618 MS.gene066932:intron 45.0%
AACATACCTGAGGGAGACGT+GGG + chr8.4:55182621-55182640 None:intergenic 50.0%
AAGCAGACCGGAGTTCAAAC+CGG + chr8.4:55180700-55180719 None:intergenic 50.0%
ACTTTCATACGGGCCCAATC+TGG - chr8.4:55184107-55184126 MS.gene066932:intron 50.0%
AGGACCTGGAACATACCTGA+GGG + chr8.4:55182630-55182649 None:intergenic 50.0%
AGGTTCCTATCTCAGTGAGG+AGG + chr8.4:55184850-55184869 None:intergenic 50.0%
CAGAATACCTACATGGCGAC+AGG + chr8.4:55184982-55185001 None:intergenic 50.0%
CGTGGCAAAAGCTGCAGATT+TGG + chr8.4:55182018-55182037 None:intergenic 50.0%
CTACATGGCGACAGGTAAGT+GGG + chr8.4:55184974-55184993 None:intergenic 50.0%
CTATCCACAATCGGTGACAC+CGG + chr8.4:55182395-55182414 None:intergenic 50.0%
CTCCACACAAAGACTGGATC+AGG - chr8.4:55180959-55180978 MS.gene066932:intron 50.0%
CTCCTGATCCAGTCTTTGTG+TGG + chr8.4:55180964-55180983 None:intergenic 50.0%
CTTTGCAGGCTATTCGAGCA+TGG - chr8.4:55185435-55185454 MS.gene066932:intron 50.0%
GAGGAAGTGGAGATCGTACT+CGG + chr8.4:55185925-55185944 None:intergenic 50.0%
GAGTCTGAAGAATGACGAGC+AGG - chr8.4:55184158-55184177 MS.gene066932:intron 50.0%
GATTGGGCCCGTATGAAAGT+TGG + chr8.4:55184107-55184126 None:intergenic 50.0%
GCCATGGAAGATTTCGGTGA+TGG + chr8.4:55182493-55182512 None:intergenic 50.0%
GCCTCATATATAAGGGCTCC+AGG + chr8.4:55182808-55182827 None:intergenic 50.0%
GGAACATGGACAGGCATTTC+GGG + chr8.4:55185162-55185181 None:intergenic 50.0%
GGATCACTCTCCTTTCACAC+TGG - chr8.4:55183323-55183342 MS.gene066932:intron 50.0%
GGCAGAAGATATTCAGGTGG+AGG - chr8.4:55180329-55180348 MS.gene066932:intron 50.0%
GGTGGAGGACCATATAAAGG+CGG - chr8.4:55180344-55180363 MS.gene066932:intron 50.0%
GTCTTTCTTACCCCTGATGC+TGG - chr8.4:55185235-55185254 MS.gene066932:intron 50.0%
GTGGAGGACCATATAAAGGC+GGG - chr8.4:55180345-55180364 MS.gene066932:intron 50.0%
TAGAGCCTCCTCACTGAGAT+AGG - chr8.4:55184842-55184861 MS.gene066932:intron 50.0%
TAGTGCCCAACCGTAGTTAC+AGG + chr8.4:55182777-55182796 None:intergenic 50.0%
TCCAAGGAATGTGAGAGGTG+TGG - chr8.4:55184214-55184233 MS.gene066932:intron 50.0%
TCCTCAACAGCCATCCTGAA+CGG - chr8.4:55184571-55184590 MS.gene066932:intron 50.0%
TCTGGAAATGCCAGCATCAG+GGG + chr8.4:55185248-55185267 None:intergenic 50.0%
TGAAACTGGAGCTGCAGTGA+AGG + chr8.4:55184540-55184559 None:intergenic 50.0%
TGGAGGACCATATAAAGGCG+GGG - chr8.4:55180346-55180365 MS.gene066932:intron 50.0%
TGGCACATTGTAGGACGACT+TGG - chr8.4:55185455-55185474 MS.gene066932:intron 50.0%
TGGGTTCCAAGGAATGTGAG+AGG - chr8.4:55184209-55184228 MS.gene066932:intron 50.0%
TGGTAACACCAGCAATCGGA+AGG + chr8.4:55181998-55182017 None:intergenic 50.0%
TGGTTCAACCGTGGTTGAAG+AGG + chr8.4:55180652-55180671 None:intergenic 50.0%
TGTAGGTCAAAGATCGGCCA+TGG + chr8.4:55182509-55182528 None:intergenic 50.0%
TGTGAAGATTGGCAGTACGG+CGG + chr8.4:55182442-55182461 None:intergenic 50.0%
TTCAAACCGGTGAGGCTTCT+AGG + chr8.4:55180687-55180706 None:intergenic 50.0%
TTCTGTAGGGAGCTGGTTGT+GGG - chr8.4:55184190-55184209 MS.gene066932:intron 50.0%
TTTCTGTAGGGAGCTGGTTG+TGG - chr8.4:55184189-55184208 MS.gene066932:intron 50.0%
! CAAGGAATGTGAGAGGTGTG+GGG - chr8.4:55184216-55184235 MS.gene066932:intron 50.0%
! CACATTGTAGGACGACTTGG+AGG - chr8.4:55185458-55185477 MS.gene066932:intron 50.0%
! CCAAGGAATGTGAGAGGTGT+GGG - chr8.4:55184215-55184234 MS.gene066932:intron 50.0%
! GCAGGCGAGGAATTTTCTGT+AGG - chr8.4:55184176-55184195 MS.gene066932:intron 50.0%
! TGGCTCAATTGGTTCAACCG+TGG + chr8.4:55180661-55180680 None:intergenic 50.0%
!! ACGGCGGATTTTCGGTTTTC+TGG + chr8.4:55182426-55182445 None:intergenic 50.0%
!! GTAGGGAAATAGTGGGTGGT+CGG + chr8.4:55184881-55184900 None:intergenic 50.0%
!! TTGGCAGTACGGCGGATTTT+CGG + chr8.4:55182434-55182453 None:intergenic 50.0%
ACTCTGGACTGTGCCTTCTC+CGG + chr8.4:55180434-55180453 None:intergenic 55.0%
CCACTTACCTGTCGCCATGT+AGG - chr8.4:55184972-55184991 MS.gene066932:intron 55.0%
CCATGACCTAGAAGCCTCAC+CGG - chr8.4:55180678-55180697 MS.gene066932:CDS 55.0%
CCCACACCTCTCACATTCCT+TGG + chr8.4:55184218-55184237 None:intergenic 55.0%
CCTACATGGCGACAGGTAAG+TGG + chr8.4:55184975-55184994 None:intergenic 55.0%
CTGGCTAGTGGCTAGCAAGT+AGG - chr8.4:55181268-55181287 MS.gene066932:intron 55.0%
CTTGCTAGCCACTAGCCAGT+GGG + chr8.4:55181267-55181286 None:intergenic 55.0%
GAACATACCTGAGGGAGACG+TGG + chr8.4:55182622-55182641 None:intergenic 55.0%
GAGGACCTGGAACATACCTG+AGG + chr8.4:55182631-55182650 None:intergenic 55.0%
GCAGCATGTGGAACATGGAC+AGG + chr8.4:55185171-55185190 None:intergenic 55.0%
GCAGTGAAGGAGCCCTTTGT+AGG + chr8.4:55184527-55184546 None:intergenic 55.0%
GGCGACAGGTAAGTGGGTAA+GGG + chr8.4:55184968-55184987 None:intergenic 55.0%
GTCTCCCTCAGGTATGTTCC+AGG - chr8.4:55182623-55182642 MS.gene066932:intron 55.0%
GTGGGTGGTCGGTTAAGGAA+AGG + chr8.4:55184870-55184889 None:intergenic 55.0%
TCAACAGCCATCCTGAACGG+CGG - chr8.4:55184574-55184593 MS.gene066932:intron 55.0%
TGAAGAATGACGAGCAGGCG+AGG - chr8.4:55184163-55184182 MS.gene066932:intron 55.0%
TGGCGACAGGTAAGTGGGTA+AGG + chr8.4:55184969-55184988 None:intergenic 55.0%
! ACTTGCTAGCCACTAGCCAG+TGG + chr8.4:55181268-55181287 None:intergenic 55.0%
!! AGCCTCACCGGTTTGAACTC+CGG - chr8.4:55180690-55180709 MS.gene066932:CDS 55.0%
CATTTGCCCACGTCTCCCTC+AGG - chr8.4:55182612-55182631 MS.gene066932:intron 60.0%
CCGGTGAGGCTTCTAGGTCA+TGG + chr8.4:55180681-55180700 None:intergenic 60.0%
GACCGGAGTTCAAACCGGTG+AGG + chr8.4:55180695-55180714 None:intergenic 60.0%
GCCGTTCAGGATGGCTGTTG+AGG + chr8.4:55184575-55184594 None:intergenic 60.0%
GGAGCTGGTTGTGGGTTCCA+AGG - chr8.4:55184198-55184217 MS.gene066932:intron 60.0%
!! CAGTCCGGTGTCACCGATTG+TGG - chr8.4:55182388-55182407 MS.gene066932:intron 60.0%
GCAAGAGCCGCCGTTCAGGA+TGG + chr8.4:55184584-55184603 None:intergenic 65.0%
TGCAGCAAGAGCCGCCGTTC+AGG + chr8.4:55184588-55184607 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 55180017 55186148 55180017 ID=MS.gene066932
chr8.4 mRNA 55180017 55186148 55180017 ID=MS.gene066932.t1;Parent=MS.gene066932
chr8.4 exon 55185714 55186148 55185714 ID=MS.gene066932.t1.exon1;Parent=MS.gene066932.t1
chr8.4 CDS 55185714 55186148 55185714 ID=cds.MS.gene066932.t1;Parent=MS.gene066932.t1
chr8.4 exon 55185157 55185242 55185157 ID=MS.gene066932.t1.exon2;Parent=MS.gene066932.t1
chr8.4 CDS 55185157 55185242 55185157 ID=cds.MS.gene066932.t1;Parent=MS.gene066932.t1
chr8.4 exon 55180820 55180898 55180820 ID=MS.gene066932.t1.exon3;Parent=MS.gene066932.t1
chr8.4 CDS 55180820 55180898 55180820 ID=cds.MS.gene066932.t1;Parent=MS.gene066932.t1
chr8.4 exon 55180663 55180722 55180663 ID=MS.gene066932.t1.exon4;Parent=MS.gene066932.t1
chr8.4 CDS 55180663 55180722 55180663 ID=cds.MS.gene066932.t1;Parent=MS.gene066932.t1
chr8.4 exon 55180418 55180539 55180418 ID=MS.gene066932.t1.exon5;Parent=MS.gene066932.t1
chr8.4 CDS 55180418 55180539 55180418 ID=cds.MS.gene066932.t1;Parent=MS.gene066932.t1
chr8.4 exon 55180240 55180311 55180240 ID=MS.gene066932.t1.exon6;Parent=MS.gene066932.t1
chr8.4 CDS 55180240 55180311 55180240 ID=cds.MS.gene066932.t1;Parent=MS.gene066932.t1
chr8.4 exon 55180017 55180119 55180017 ID=MS.gene066932.t1.exon7;Parent=MS.gene066932.t1
chr8.4 CDS 55180017 55180119 55180017 ID=cds.MS.gene066932.t1;Parent=MS.gene066932.t1
Gene Sequence

>MS.gene066932

ATGATTATATCACACCCTTTTACACCTTTTCCTTCTTCCATTACCATTACATGCTCCAAACCTTTTTCCCGTAACAATCACTTCATCAAATCCTATATACCTCCTTTTCTACTCCTGAGAAATGCCAGAACATCGACATTGTTATGTAGTGCTAGAAGTGGACGACGCGAGAATTCAAACAGTTTGGACTTTGATATAGACATCAATGAGGAAGATCAAGTACCTGAGAATGATGATTATGGTGGATTTTCAGCTCAAGGGATGGAAACAAATGATATTATTGATGTAGATGAAGGACAAGATGATGGTGATGGCAGAAGATATTCAGGTGGAGGACCATATAAAGGCGGGGATGAAAAGGATTTTGATAGAAATCCAGAATTTGCTGAAATACTTGGTGGTTATCTAGATGATCCGGAGAAGGCACAGTCCAGAGTAAGCAACGTCATCTATTGATAGTTCATACAGTGTTTTAATGATCAGAACCAGTTGAACCGGAAATGTTTTTCCGGTTGATTTGATTTTGGTTGCATCGCAGTCTAGTTGAACTAGATTGAATAGCAGTTGATTCAATTAAACTGGTTTTTATTTTCTGCATTTTTTTTTTACTTTTTTACTTATTTATTTGTCATCCTCTTCAACCACGGTTGAACCAATTGAGCCATGACCTAGAAGCCTCACCGGTTTGAACTCCGGTCTGCTTTTTAAAACATCGGTTTCATGACTTTAGTCTTATACATCAGTAGTGGAATCTATCTTCATACGAGGGAGTTTTCTTTCGTTTCCATTGTTTTAAGGGTGATGTTTGTTACCTTTCACGTTGTTGAAAATTTAAGAGTAGCAGCTTCAAATTACTTTCCAACTACGATACGAAGATTAAATCAATTGAGCTTGATTAATTTGCAGATGGAAGAGAGACTAAGAAAAAACAGGAACAAAATACTCCACACAAAGACTGGATCAGGAGTACCAATGAAAGTGTCATTTAATAAGTAAGTTCAATTCAACTGTATATATGTATGCTTATATTAAAAAAAAAAAAACTGTATACATATACGTGACTGAACCATGCAGTTTTCTATTGTTTGTGCTGATGTAGTTTCATGTTTCTTATCATTAAGTTTCTCTTTCTCTTCTATTTAGTTTGCTAGAATGTAGAAATGTACAGCGGAGGAATTGAAGTTATTATGGTTAATAAATTCACATAGCCAGTAAGATTGGTCAAATTTTACTTTCATAATTTCTTTCCCACTGGCTAGTGGCTAGCAAGTAGGACATAAATACAACGTTGGTGGTGTTGAGAGTTGTAATACCTGTTATTATTTTATTTCCTTGTACTGATATGTAACTTAATTTCCTTTTATCAGGACAGATTTTAAGCCATTAGTGTAGCTCTATTATTGGAACGTAGTAATAAGTAATACTGTAATAGTCTATAGAATGACTAACGGTAAATATAGTTGCTCTAGTAAGTAATAACGACTAGAGTAGGAGAGGCCTGACAGAACAAGTGACTTGAAAATGTAACATAAACAATTAAGTTATTGAATGACGAATTCAGTGTATTTAAGGTACACATGCGATATATTGAGTGCTCAGGCTTAACTTCTTATGTTTTTTAAGGTTAGAATAGAAATAAGCATTTAAATAGGTTTTAGATTATGATTATCTCTGGTATAACTTCTCTGGCATAACTTCTTCAGGGCTCAACTTGAAATAAAACTTGAAGCTGTAGGGCTTTAGATTAGAACAGAGGAAAGACAAATAATAAGTACTTTGAATTACAATTATGGTTTGATATGATTGATGATTTATCGATTTTGAAGATACATATGATAAAGTACCCATAGAGATGTAGTGGGAGACTCTAGAAAATAAAAGACTTCAGATTGCTTATATTCTGCAATCTAAGAACAATAATCATATGGTTTAGGGTTATGACAGTAACTAAAATGATGCTATCGGGGACAAAAGAGTACCTTCCGATTGCTGGTGTTACCAAATCTGCAGCTTTTGCCACGAGACTAGTTTCAATTGAAGTTTAGTTTCTACAATTTTACTATTTTAGCTGATGCTCATTTAATAATTTACACACAGAAAGACTGGTCTTCTGAACCTCATTTCTACTTGCAAGTATAGGTCCATGATTTGTTGATTACAGACTTAAGATCTCTGCATTATTGCATGACAGATTGTACTGTATGAAAGTATCATTGTCCACTGATTTTGTAGCTCATAACAGTTTTAACTTTTGGCCTATTCTGGTCTCTGTCAACAAATGATAACCATGAAAGCTTATACTTCTTAGGTAGGACTCAATACATGATTTTCTATTTCTTCCCACACTCAACAAAAATGTGAACATGGACATCAGTCCGGTGTCACCGATTGTGGATAGTGACTATGCCAGAAAACCGAAAATCCGCCGTACTGCCAATCTTCACAAATTGGCTGTGACCAGTTGTCAAAAAATCCATCACCGAAATCTTCCATGGCCGATCTTTGACCTACACTGCATTAGTCTTGCTGAAGATTTTGTGCTCTTTTGAGATCTTTCTGTAGACATGTGTAGTTTGTGTCTATAAAATCTATTTTCATTTGCCCACGTCTCCCTCAGGTATGTTCCAGGTCCTCAATTACGATTTCGATCTGAAACATGCTGTTCAAGTGAAAGCACTTGATATATTCAAACTACTAATCCAATATTGGGAGGGTGCCATTTGTGTGAGAACACATGGTGAAAATACAAAAGATCTTCCTGTAACTACGGTTGGGCACTAGAATAAAACCTGGAGCCCTTATATATGAGGCTTCTATCCTAGTTCTAAACGTGTTTTCTAAATATATGCAAGAGACTCTGCCACAATTTATGTTTTTTTCAGACGACATAGTTTTAATTAGAGAATTGAGAGAAATAAATAGAAAGTTAGAAATATGGAGACAAGCCTTATGACACTTTTTTTTGCATCTAGTTTCAGTGAAGTTTAATGACAAAAACTTCGTTATCTGGTAGTAGCAACAGATTGGGACCGTTATTAGGGGTCGTCTATTGCACTTATTTGTGGTTTTCCCATAAATATCTATATTGATATTAGAGGTTAGAGTTAGACAGTTTTGTTCTGCTCTTGACTTGGGGAATACAAAAAATGGTGGAAGATCTATATAAGAGCATCCTTAGAATCTTTTCCTTGGTAAGTTAAGATTCAGTAGAACACTCAGCAAAAATAGAGCAGGATAAGAGAAAGAAAGAATAGAATTCTGTATCAGGCAAGAACAGGGAAAGGAAAGTTCAGAAGAGTAACCAATGGATCACTCTCCTTTCACACTGGATTAACCGGTTACAACTCAATCATTCACACATGCATTCCTCTTCGTTTAGACTTTAGAGGGTTATTATAGAACTGAAACTAACCAACTCCTAACTGTCTAGTTAACCCCTATTCTGCTTCATTTATAGTAGACCTACAGGGTTCTCTTAGTTTCTGTAGGGGGCTCATCCTTTTGTCTAACAAATGTCTACTGAGAGTGAAAGCTTTGATTGATTTCTTAGTTTCCATTGGATTTCCTGTATCATCACAAGAACATTTAGAGGCAGTTCTGGATGGTTTATCATATGACTATGAATGTATAGTGCCTCTGTAATATCTGTAAATAGCCGTTTTGATTCCTACATTGGTGGTAAAATAGATCATTGGTGCTTGCTCATGAAGCCAGAATTTAGGATAACAAGAAGGCCTCAACTATGGAATATTTTCCCATTAATATGGTGCAGAAACAATCCAAAACTAAGTCAACAACTTCATTATTGCATCTGTGTAGTTCAAGTCAGGAACAATTGCATGCTTTTCATGAGTGTATGTTTTCTTAAGCTTCTGGTCAACGAGATTAGTCTCAAGTTATGGTGTCTAGTATGCTAAAAGACCAGTCATGATGCTTAAGTTGGTTACCATACATTTGGCCATAACTGATCAACTTCCTTTTACTTCAAATACGCCTTTATCTTGTTCTTCATAAGCGTCTTCACAATAATTTCATTCATGTTGGAAGCAGTAGTATCTGATAGACACCGAAGTCTTGAACTCATTGACCAACTTTCATACGGGCCCAATCTGGAAATGTGAGTCCTATAGTCTCACATGCTGAGTCTGAAGAATGACGAGCAGGCGAGGAATTTTCTGTAGGGAGCTGGTTGTGGGTTCCAAGGAATGTGAGAGGTGTGGGGTACTAATAATATGAGGGTATCATTGTAGGTGTTAAACAGTGGTTATGAACCATTATGGAGGGAGAGTTCTTTGTTTGTAAAGAGCTTTTCTCTTGGGAATATTTTCTGAGATTGTTCTCCTAGTTTATTTTGGATCCAGAATTCCTGCATAAGGGGAATCCAAATATGTTTATTTCCTTTGCTATGAATAAAATCTCTCATATAGTTCCATTTCTCTTGAGTTTGATATTTTTTTTATCTTATCAAGTTCAAGTTCTTTGTCCTCTATGATTAATCAAATTATTTCCTACAAAGGGCTCCTTCACTGCAGCTCCAGTTTCACATTTGCTAGTTCCTCAACAGCCATCCTGAACGGCGGCTCTTGCTGCACCTTAAAAATTCTTCACACAGCATCATTAGTATGCTGATTCACGTAGCACATCATATTTATCTAATGGCAAAATATAATTAGTAGAAACTGTAAATTTTTAAACCACGTGGGAATGTGTTAGTTTATTCTATATCCTAACACAATATGATGCAAGAGAAAAGAACAATGAACTGAAACATAACAATGTATGGATTGATCTCATTGCAGACATGATAATTGCACTCTTAAGAAGATAGAGCCTCCTCACTGAGATAGGAACCTTTCCTTAACCGACCACCCACTATTTCCCTACTTCATACTTCTCACTGTCCTTTGATTCAGTGATCCTCCTCTAAATACCTCATCTCTACATGATTCCCTTACCCACTTACCTGTCGCCATGTAGGTATTCTGTTATTCTCAGTATATTTGCTAGAGACAATTGTTTGTATTCCAAATATCACAGATATATTTTGAATCTAATAGAGATGCTACACATTTATATTGTAGGTGTTTCTGTTGCATCTAATAGAGATGCCACATCATATTTAAAAAAAATTTACTTTTGATTCCCGAAATGCCTGTCCATGTTCCACATGCTGCAATGATCACATATTCTATTTGCTTTTCTGTCAAAAAGATATTCTGTCTTTCTTACCCCTGATGCTGGCATTTCCAGATTTGATTTTTCAAACTCATATATATGGTTTGAATTTTACAATGCTCCATTGGCAAAAGACATCAACTTAATTTGTGATGTAAGTAACTCCATCCTATGACTTTATTTTGTTGTACATTCTCCACGATGCACACATGCTTCAATTAGGAAGTTTTGTTGAATTTGGATCTTTGCAGGCTATTCGAGCATGGCACATTGTAGGACGACTTGGAGGATGCAATGCCATGAACATGCAAGTAAGTTGTTCTTCTCTTCTGCCATGGAAACCAAATTTCTTTCTCTCTCATTTTTCCTTTCTATTTATAGTGAATTTTTAAAACATAATTGTATTGCTTATAGAACTGGCATAATTTCTACAGCTGTCACAGTCTGAGATAGAAAAACGACCAAGTTACGATTATATTCAGGGAGCGAATGTAACACCAACTACATTTTACAACATTGGGGATCTTGAGGTTCAAGACAACTTAGCTCGAATATGGTGCAGAACTAATCGCAGATTCCTTCATTCTTAATGCTTTGTTATGCATATTAGTTAATGTAATCTGAAGTGAAAATTCTAATAATTTATTTTTGTGATATAACAGGATAGATATTGGGACTAATGAACCATTGATTCTAGATGTTTTGATAAATGCATTGACACAGATAAGTTCCGAGTACGATCTCCACTTCCTCTGTTTGTTTAATTAACTACTGCAGTTCATTTATTTTCCCTTTCTCTCAATACATGTTTGTATTAATCCAATTAATTGATTTGGCTTTTTGTTTTTTGATAGCTTTGTTGGGATCAAGCAAGTAGTGTTTGGTGGAGAAGAATTTGAGAATTGGAAAGAGGATTTAACATCAGAGGATTCAGGATATGGTGTTCATAAGATCTAG

Protein sequence

>MS.gene066932.t1

MIISHPFTPFPSSITITCSKPFSRNNHFIKSYIPPFLLLRNARTSTLLCSARSGRRENSNSLDFDIDINEEDQVPENDDYGGFSAQGMETNDIIDVDEGQDDGDGRRYSGGGPYKGGDEKDFDRNPEFAEILGGYLDDPEKAQSRMEERLRKNRNKILHTKTGSGVPMKVSFNKFDFSNSYIWFEFYNAPLAKDINLICDAIRAWHIVGRLGGCNAMNMQLSQSEIEKRPSYDYIQGANVTPTTFYNIGDLEVQDNLARIWIDIGTNEPLILDVLINALTQISSDFVGIKQVVFGGEEFENWKEDLTSEDSGYGVHKI