Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068238.t1 | XP_003597511.2 | 84.3 | 859 | 79 | 2 | 1 | 859 | 46 | 848 | 0.00E+00 | 1236.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068238.t1 | G7IHU0 | 84.3 | 859 | 79 | 2 | 1 | 859 | 46 | 848 | 0.0e+00 | 1236.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene068238 | 0.815105 | 1.10E-51 | -1.69E-46 |
| MS.gene049435 | MS.gene068238 | 0.81115 | 8.08E-51 | -1.69E-46 |
| MS.gene050226 | MS.gene068238 | 0.801394 | 9.19E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene068238 | 0.803358 | 3.62E-49 | -1.69E-46 |
| MS.gene050807 | MS.gene068238 | 0.814275 | 1.67E-51 | -1.69E-46 |
| MS.gene05157 | MS.gene068238 | 0.801998 | 6.91E-49 | -1.69E-46 |
| MS.gene052020 | MS.gene068238 | 0.899525 | 1.82E-77 | -1.69E-46 |
| MS.gene05215 | MS.gene068238 | 0.809987 | 1.44E-50 | -1.69E-46 |
| MS.gene052665 | MS.gene068238 | 0.826468 | 2.67E-54 | -1.69E-46 |
| MS.gene053074 | MS.gene068238 | 0.812472 | 4.17E-51 | -1.69E-46 |
| MS.gene05417 | MS.gene068238 | 0.812891 | 3.38E-51 | -1.69E-46 |
| MS.gene055608 | MS.gene068238 | 0.805254 | 1.46E-49 | -1.69E-46 |
| MS.gene056173 | MS.gene068238 | 0.843384 | 1.45E-58 | -1.69E-46 |
| MS.gene056553 | MS.gene068238 | 0.829389 | 5.29E-55 | -1.69E-46 |
| MS.gene057750 | MS.gene068238 | 0.80316 | 3.98E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene068238 | 0.850034 | 2.20E-60 | -1.69E-46 |
| MS.gene058168 | MS.gene068238 | 0.820509 | 6.61E-53 | -1.69E-46 |
| MS.gene059124 | MS.gene068238 | 0.81184 | 5.72E-51 | -1.69E-46 |
| MS.gene059937 | MS.gene068238 | 0.804685 | 1.92E-49 | -1.69E-46 |
| MS.gene060137 | MS.gene068238 | -0.800217 | 1.60E-48 | -1.69E-46 |
| MS.gene060998 | MS.gene068238 | 0.803684 | 3.10E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068238.t1 | MTR_2g098830 | 81.185 | 861 | 104 | 4 | 1 | 860 | 46 | 849 | 0.0 | 1366 |
| MS.gene068238.t1 | MTR_2g098830 | 64.948 | 388 | 85 | 4 | 1 | 386 | 957 | 1295 | 6.79e-153 | 488 |
| MS.gene068238.t1 | MTR_2g098830 | 46.053 | 152 | 30 | 2 | 709 | 860 | 1240 | 1339 | 2.46e-25 | 114 |
| MS.gene068238.t1 | MTR_2g098830 | 71.429 | 56 | 16 | 0 | 583 | 638 | 1240 | 1295 | 1.06e-15 | 82.8 |
| MS.gene068238.t1 | MTR_2g098830 | 72.222 | 54 | 15 | 0 | 457 | 510 | 1240 | 1293 | 3.27e-15 | 80.9 |
| MS.gene068238.t1 | MTR_2g098830 | 66.667 | 54 | 18 | 0 | 646 | 699 | 1240 | 1293 | 3.12e-13 | 74.7 |
| MS.gene068238.t1 | MTR_2g098830 | 77.010 | 622 | 90 | 3 | 240 | 860 | 13 | 582 | 0.0 | 918 |
| MS.gene068238.t1 | MTR_2g098830 | 64.948 | 388 | 85 | 4 | 1 | 386 | 690 | 1028 | 1.53e-155 | 489 |
| MS.gene068238.t1 | MTR_2g098830 | 46.053 | 152 | 30 | 2 | 709 | 860 | 973 | 1072 | 2.87e-25 | 113 |
| MS.gene068238.t1 | MTR_2g098830 | 71.429 | 56 | 16 | 0 | 583 | 638 | 973 | 1028 | 1.34e-15 | 82.0 |
| MS.gene068238.t1 | MTR_2g098830 | 72.222 | 54 | 15 | 0 | 457 | 510 | 973 | 1026 | 3.82e-15 | 80.9 |
| MS.gene068238.t1 | MTR_2g098830 | 66.667 | 54 | 18 | 0 | 646 | 699 | 973 | 1026 | 3.57e-13 | 74.3 |
| MS.gene068238.t1 | MTR_2g098720 | 68.239 | 318 | 82 | 5 | 1 | 315 | 47 | 348 | 1.32e-138 | 417 |
| MS.gene068238.t1 | MTR_2g098710 | 65.549 | 328 | 88 | 7 | 1 | 319 | 46 | 357 | 4.17e-135 | 409 |
| MS.gene068238.t1 | MTR_4g067090 | 53.453 | 391 | 128 | 5 | 1 | 387 | 48 | 388 | 4.22e-127 | 396 |
| MS.gene068238.t1 | MTR_2g098730 | 68.231 | 277 | 69 | 5 | 1 | 274 | 47 | 307 | 3.11e-118 | 365 |
| MS.gene068238.t1 | MTR_0002s1280 | 61.462 | 301 | 60 | 4 | 3 | 300 | 51 | 298 | 8.12e-112 | 345 |
| MS.gene068238.t1 | MTR_2g098770 | 49.383 | 324 | 65 | 6 | 3 | 317 | 51 | 284 | 3.39e-81 | 267 |
| MS.gene068238.t1 | MTR_8g463810 | 64.062 | 64 | 22 | 1 | 785 | 848 | 31 | 93 | 1.73e-14 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068238.t1 | AT1G05950 | 40.217 | 276 | 119 | 6 | 1 | 274 | 56 | 287 | 1.98e-48 | 181 |
| MS.gene068238.t1 | AT1G05950 | 40.217 | 276 | 119 | 6 | 1 | 274 | 56 | 287 | 3.80e-48 | 180 |
| MS.gene068238.t1 | AT1G05950 | 40.217 | 276 | 119 | 6 | 1 | 274 | 56 | 287 | 3.80e-48 | 180 |
| MS.gene068238.t1 | AT1G05950 | 40.217 | 276 | 119 | 6 | 1 | 274 | 56 | 287 | 6.15e-48 | 181 |
| MS.gene068238.t1 | AT1G05950 | 40.217 | 276 | 119 | 6 | 1 | 274 | 56 | 287 | 1.94e-47 | 179 |
Find 132 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCCATTCTGAGATTATTT+TGG | 0.183672 | 2.3:+4628674 | None:intergenic |
| GAGAACTGCTTCTTGCATTT+TGG | 0.220926 | 2.3:-4629873 | MS.gene068238:CDS |
| TAGTATTGATATTATGCTTT+TGG | 0.260280 | 2.3:-4629236 | MS.gene068238:CDS |
| TAATCTCAGAATGGATTTCT+AGG | 0.271070 | 2.3:-4628668 | MS.gene068238:intron |
| ATGGGCCACCCCTCTATATT+AGG | 0.295067 | 2.3:+4629933 | None:intergenic |
| TATTCTTCTTTGAGTTTAGA+TGG | 0.308246 | 2.3:+4626817 | None:intergenic |
| TTCAAAAGTTGCCGTCCTTT+TGG | 0.316213 | 2.3:-4629910 | MS.gene068238:CDS |
| TTCTGTGTGAATTTCATATA+CGG | 0.322544 | 2.3:+4630059 | None:intergenic |
| TTTCTTTAACTTCAAGCTTC+GGG | 0.333801 | 2.3:+4628291 | None:intergenic |
| AAGCTGTCTTCTCTTTGCTC+TGG | 0.340297 | 2.3:+4629194 | None:intergenic |
| CTTTCAGTTAAATCTTTGAT+AGG | 0.353682 | 2.3:+4629115 | None:intergenic |
| TGTCAAGAAAGACGAGGATA+TGG | 0.366263 | 2.3:-4627394 | MS.gene068238:CDS |
| TTCATTAACTTGTAAAGTAT+TGG | 0.372964 | 2.3:+4626780 | None:intergenic |
| AAGAAGTGTTCCTAATATAG+AGG | 0.376503 | 2.3:-4629943 | MS.gene068238:CDS |
| CCTTTGGTCAAAAGAAGTTC+TGG | 0.377104 | 2.3:-4628747 | MS.gene068238:CDS |
| AAGTATTGGCAATATGCTTC+TGG | 0.385074 | 2.3:+4626794 | None:intergenic |
| ATTCTGTAACTTCAAGCTTC+GGG | 0.385213 | 2.3:+4628399 | None:intergenic |
| ATTTCTTTAACTTCAAGCTT+CGG | 0.395244 | 2.3:+4628290 | None:intergenic |
| TGTCAAGAAAGACGAGGATA+TGG | 0.399475 | 2.3:-4628150 | MS.gene068238:CDS |
| ACTGAAAGGTTCGTTACAAT+TGG | 0.406054 | 2.3:-4629100 | MS.gene068238:intron |
| GAATCCAGAGCTAGAATTTG+TGG | 0.406085 | 2.3:-4630132 | MS.gene068238:CDS |
| GATTCTGTAACTTCAAGCTT+CGG | 0.409278 | 2.3:+4628398 | None:intergenic |
| AGCTGGATATTCTGCTGTTA+AGG | 0.413381 | 2.3:-4629664 | MS.gene068238:CDS |
| AGCTGTCTTCTCTTTGCTCT+GGG | 0.427005 | 2.3:+4629195 | None:intergenic |
| TCCACATCAACAAGGTCAAC+AGG | 0.443780 | 2.3:+4630035 | None:intergenic |
| TAAAAGTGTACATATATCAT+AGG | 0.444300 | 2.3:+4629974 | None:intergenic |
| GTTAAGAAGCCTTCGAGAAA+CGG | 0.450657 | 2.3:-4629717 | MS.gene068238:CDS |
| CTCATCTTTGGATAGCGTCC+GGG | 0.454500 | 2.3:-4628773 | MS.gene068238:intron |
| TGTCAAGGAAGACCAGGATA+TGG | 0.457685 | 2.3:-4626863 | MS.gene068238:CDS |
| TACAATCACGCAGTGTGGTT+CGG | 0.461292 | 2.3:-4627604 | MS.gene068238:CDS |
| GGCTTGTTATCATGACCAAC+AGG | 0.463700 | 2.3:+4628056 | None:intergenic |
| TGTCAAGAAAGATCATGATA+TGG | 0.466559 | 2.3:-4627772 | MS.gene068238:CDS |
| GGTCAAGAAAGACCATGATA+TGG | 0.470543 | 2.3:-4627016 | MS.gene068238:CDS |
| GGTCAAGAAAGACCATGATA+TGG | 0.470543 | 2.3:-4627583 | MS.gene068238:CDS |
| CTGTCAAGAAAGACGAGGAT+AGG | 0.472021 | 2.3:-4627962 | MS.gene068238:CDS |
| TACAATCATGCAGTGTGGTT+CGG | 0.473677 | 2.3:-4627037 | MS.gene068238:CDS |
| AATGCCACAAATTCTAGCTC+TGG | 0.478850 | 2.3:+4630128 | None:intergenic |
| CCTTCTTACTATCGACCAAA+AGG | 0.491760 | 2.3:+4629895 | None:intergenic |
| TCAAAAGAAGTTCTGGCAGT+TGG | 0.500806 | 2.3:-4628740 | MS.gene068238:CDS |
| TTCATATACGGTAACAAAGC+TGG | 0.503834 | 2.3:+4630071 | None:intergenic |
| AGTAGCGAGGGCATGTCTGC+TGG | 0.509063 | 2.3:-4628260 | MS.gene068238:CDS |
| TGCAGCTCTTAATCAGAAAG+AGG | 0.516884 | 2.3:-4627073 | MS.gene068238:CDS |
| ATTCCAAAATAATCTCAGAA+TGG | 0.526151 | 2.3:-4628677 | MS.gene068238:CDS |
| GATAAACTTCAAACCTCGCT+AGG | 0.526955 | 2.3:+4626703 | None:intergenic |
| GTTACAATAGTTTCGCTGCA+TGG | 0.528534 | 2.3:+4628332 | None:intergenic |
| GAAATTCATGTAAGTAGCGA+GGG | 0.529019 | 2.3:-4628272 | MS.gene068238:CDS |
| TGCTCACAGTCGATCAGTGA+AGG | 0.529950 | 2.3:-4629151 | MS.gene068238:CDS |
| GAAAGATCATGGTATGGATG+TGG | 0.532023 | 2.3:-4627199 | MS.gene068238:CDS |
| AGTTATCCACATCCATATCA+TGG | 0.533909 | 2.3:+4627004 | None:intergenic |
| TGTCAAGAAAGACGAGGATA+GGG | 0.535707 | 2.3:-4627961 | MS.gene068238:CDS |
| TGTTATCAAGACCAACAGAC+AGG | 0.535916 | 2.3:+4628357 | None:intergenic |
| AGTTGTCCACATCCATATCC+TGG | 0.536631 | 2.3:+4626851 | None:intergenic |
| GAAAGACGAGGATAGGGATG+TGG | 0.537369 | 2.3:-4627955 | MS.gene068238:CDS |
| AGTTATTCACATCCATATCA+TGG | 0.539702 | 2.3:+4627571 | None:intergenic |
| TGCAGCTCTTAATCAGAAAG+AGG | 0.539794 | 2.3:-4627640 | MS.gene068238:CDS |
| GTTCTATCACTGATGGGGTA+CGG | 0.540451 | 2.3:-4629851 | MS.gene068238:CDS |
| GAAAGACGAGGATATGGATG+TGG | 0.544971 | 2.3:-4627388 | MS.gene068238:CDS |
| GAAAGACGAGGATATGGATG+TGG | 0.544971 | 2.3:-4628144 | MS.gene068238:CDS |
| CTATCAAAGATTTAACTGAA+AGG | 0.547353 | 2.3:-4629114 | MS.gene068238:CDS |
| TCATCTTTGGATAGCGTCCG+GGG | 0.552546 | 2.3:-4628772 | MS.gene068238:intron |
| GAAAGATCATGATATGGATG+TGG | 0.554210 | 2.3:-4627766 | MS.gene068238:CDS |
| TTCTGCTGTTAAGGAAGCTG+CGG | 0.557671 | 2.3:-4629655 | MS.gene068238:CDS |
| GCCTGTTGACCTTGTTGATG+TGG | 0.558017 | 2.3:-4630036 | MS.gene068238:CDS |
| AGAAGTGTTCCTAATATAGA+GGG | 0.564122 | 2.3:-4629942 | MS.gene068238:CDS |
| CAGAAAGAGGACAACGGTTG+CGG | 0.564386 | 2.3:-4627060 | MS.gene068238:CDS |
| CAGAAAGAGGACAACGGTTG+CGG | 0.564386 | 2.3:-4627627 | MS.gene068238:CDS |
| GGTTCTGTCAAGAAAGATCA+TGG | 0.569305 | 2.3:-4627210 | MS.gene068238:CDS |
| GAAAGACCATGATATGGATG+TGG | 0.569888 | 2.3:-4627010 | MS.gene068238:CDS |
| AGTAGCGAGGCCCTGTCTGT+TGG | 0.570221 | 2.3:-4628368 | MS.gene068238:CDS |
| GGAAGACCAGGATATGGATG+TGG | 0.572264 | 2.3:-4626857 | MS.gene068238:CDS |
| GAATCACATGTAAGTAGTGA+GGG | 0.573633 | 2.3:-4627516 | MS.gene068238:CDS |
| GAATCACATGTAAGTAGTGA+GGG | 0.573633 | 2.3:-4627894 | MS.gene068238:CDS |
| TAGTTTGCAAGATTCAAAGC+TGG | 0.577178 | 2.3:-4628435 | MS.gene068238:CDS |
| AGTAGCGAGGGCATGTCTGT+TGG | 0.578107 | 2.3:-4627126 | MS.gene068238:CDS |
| AGTAGCGAGGGCATGTCTGT+TGG | 0.578107 | 2.3:-4627315 | MS.gene068238:CDS |
| AGTAGCGAGGGCATGTCTGT+TGG | 0.578107 | 2.3:-4627693 | MS.gene068238:CDS |
| AGTAGAGAGGTCATGTCTGT+TGG | 0.579930 | 2.3:-4626937 | MS.gene068238:CDS |
| AGTAGTGAGGGCATGTCTGT+TGG | 0.581264 | 2.3:-4627504 | MS.gene068238:CDS |
| AGTAGTGAGGGCATGTCTGT+TGG | 0.581264 | 2.3:-4627882 | MS.gene068238:CDS |
| TTTCTGATTAAGAGCTGCAA+TGG | 0.582464 | 2.3:+4627644 | None:intergenic |
| CAGAAAGAGAACAACGGTTG+CGG | 0.583594 | 2.3:-4627438 | MS.gene068238:CDS |
| CAGAAAGAGAACAACGGTTG+CGG | 0.583594 | 2.3:-4628005 | MS.gene068238:CDS |
| GAATCACATGTAAGTAGCGA+GGG | 0.587107 | 2.3:-4627138 | MS.gene068238:CDS |
| GAATCACATGTAAGTAGCGA+GGG | 0.587107 | 2.3:-4627705 | MS.gene068238:CDS |
| TGTCAAGAAAGATCATGGTA+TGG | 0.587316 | 2.3:-4627205 | MS.gene068238:CDS |
| ACATTTGATCCGTTTCTCGA+AGG | 0.593383 | 2.3:+4629708 | None:intergenic |
| TACACAGTGTAGTTCTGTCA+AGG | 0.599872 | 2.3:-4626878 | MS.gene068238:CDS |
| TAGTTCTGTCAAGGAAGACC+AGG | 0.600042 | 2.3:-4626869 | MS.gene068238:CDS |
| GAATCACATGTAAGTAGCGA+GGG | 0.607142 | 2.3:-4627327 | MS.gene068238:CDS |
| ACAAAAGATAGAAAATTCAT+CGG | 0.609701 | 2.3:-4626755 | MS.gene068238:CDS |
| AGAAATTCATGTAAGTAGCG+AGG | 0.609941 | 2.3:-4628273 | MS.gene068238:CDS |
| AGAAGCACATGCAAGTAGTG+AGG | 0.620392 | 2.3:-4628084 | MS.gene068238:CDS |
| TCTGCTGTTAAGGAAGCTGC+GGG | 0.620915 | 2.3:-4629654 | MS.gene068238:intron |
| CTTAATCAGAAAGAGAAGAA+CGG | 0.621054 | 2.3:-4628200 | MS.gene068238:CDS |
| AGAATCACATGTAAGTAGTG+AGG | 0.623531 | 2.3:-4627517 | MS.gene068238:CDS |
| AGAATCACATGTAAGTAGTG+AGG | 0.623531 | 2.3:-4627895 | MS.gene068238:CDS |
| GCTGCAATGGTATCATTGCA+TGG | 0.627458 | 2.3:+4627657 | None:intergenic |
| GAAGCACATGCAAGTAGTGA+GGG | 0.627601 | 2.3:-4628083 | MS.gene068238:CDS |
| GCTCACAGTCGATCAGTGAA+GGG | 0.630222 | 2.3:-4629150 | MS.gene068238:CDS |
| TGAATGTACAAGACCTAGCG+AGG | 0.635184 | 2.3:-4626716 | MS.gene068238:CDS |
| AGTAGTGAGGGCATGCCTGT+TGG | 0.637938 | 2.3:-4628071 | MS.gene068238:CDS |
| AGAATCACATGTAAGTAGAG+AGG | 0.640253 | 2.3:-4626950 | MS.gene068238:CDS |
| AGAATCACATGTAAGTAGCG+AGG | 0.643178 | 2.3:-4627139 | MS.gene068238:CDS |
| AGAATCACATGTAAGTAGCG+AGG | 0.643178 | 2.3:-4627706 | MS.gene068238:CDS |
| TGCGGTACAATTACTCAGTG+TGG | 0.649902 | 2.3:-4627231 | MS.gene068238:CDS |
| TGCGGTACAATTACTCAGTG+TGG | 0.649902 | 2.3:-4627798 | MS.gene068238:CDS |
| AGAATCACATGTAAGTAGCG+AGG | 0.650167 | 2.3:-4627328 | MS.gene068238:CDS |
| CTTACTATCGACCAAAAGGA+CGG | 0.651257 | 2.3:+4629899 | None:intergenic |
| GTTACAATAGTATCACTGCA+TGG | 0.654081 | 2.3:+4627279 | None:intergenic |
| GTTACAATAGTATCACTGCA+TGG | 0.654081 | 2.3:+4627846 | None:intergenic |
| GTTACAATAGTATCACTGCA+TGG | 0.654081 | 2.3:+4628224 | None:intergenic |
| GCTGCAATAGTATCACTGCA+TGG | 0.660142 | 2.3:+4627090 | None:intergenic |
| GCTGCAATAGTATCACTGCA+TGG | 0.660142 | 2.3:+4627468 | None:intergenic |
| GCTGCGATAGTATCACTGCA+TGG | 0.662438 | 2.3:+4628035 | None:intergenic |
| GTTATCAAGACCAACAGACA+GGG | 0.665338 | 2.3:+4628358 | None:intergenic |
| TGCGGTACAATCACGCAGTG+TGG | 0.666386 | 2.3:-4627609 | MS.gene068238:CDS |
| CATCTTTGGATAGCGTCCGG+GGG | 0.674090 | 2.3:-4628771 | MS.gene068238:intron |
| AGAATCACATATAAGTAGCG+AGG | 0.674734 | 2.3:-4628381 | MS.gene068238:CDS |
| TGCGATACAATTACACAGTG+TGG | 0.681454 | 2.3:-4628176 | MS.gene068238:CDS |
| GTGTTCCTAATATAGAGGGG+TGG | 0.688067 | 2.3:-4629938 | MS.gene068238:CDS |
| TGCGGTACAATCATGCAGTG+TGG | 0.699609 | 2.3:-4627042 | MS.gene068238:CDS |
| ACTGCAGCTCCACATCAACA+AGG | 0.710487 | 2.3:+4630027 | None:intergenic |
| CTTAATCAGAAAGAGAACAA+CGG | 0.713656 | 2.3:-4627444 | MS.gene068238:CDS |
| CTTAATCAGAAAGAGAACAA+CGG | 0.713656 | 2.3:-4628011 | MS.gene068238:CDS |
| GAAGTGTTCCTAATATAGAG+GGG | 0.718089 | 2.3:-4629941 | MS.gene068238:CDS |
| GTGGAAGTACTCGACAACTG+AGG | 0.732838 | 2.3:+4628710 | None:intergenic |
| CTTAATCAGAAAGAGGACAA+CGG | 0.738632 | 2.3:-4627066 | MS.gene068238:CDS |
| CTTAATCAGAAAGAGGACAA+CGG | 0.738632 | 2.3:-4627633 | MS.gene068238:CDS |
| TGATTCTGTCAAGAAAGACG+AGG | 0.743036 | 2.3:-4627400 | MS.gene068238:CDS |
| TGATTCTGTCAAGAAAGACG+AGG | 0.743036 | 2.3:-4627967 | MS.gene068238:CDS |
| TGGTTCTGTCAAGAAAGACG+AGG | 0.753667 | 2.3:-4628156 | MS.gene068238:CDS |
| CTTGATCAGAAAGAGAACAG+CGG | 0.754686 | 2.3:-4626913 | MS.gene068238:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATTGGAAAAATAAAAA+AGG | + | chr2.3:4627348-4627367 | None:intergenic | 10.0% |
| !! | ATATAAAATGACTATCAAAA+TGG | + | chr2.3:4628048-4628067 | None:intergenic | 15.0% |
| !! | ATTGTAAATCAATCTAAATT+GGG | + | chr2.3:4628276-4628295 | None:intergenic | 15.0% |
| !! | ATTTAGTATACAGAAAAATA+AGG | + | chr2.3:4627473-4627492 | None:intergenic | 15.0% |
| !! | TATTGTAAATCAATCTAAAT+TGG | + | chr2.3:4628277-4628296 | None:intergenic | 15.0% |
| !!! | TTCTTAATTTATCTTTTAAC+AGG | - | chr2.3:4627554-4627573 | MS.gene068238:CDS | 15.0% |
| !! | ACAAAAGATAGAAAATTCAT+CGG | - | chr2.3:4630132-4630151 | MS.gene068238:CDS | 20.0% |
| !! | CTTTACTAGGTTAAATAAAT+TGG | + | chr2.3:4627362-4627381 | None:intergenic | 20.0% |
| !!! | TAAAAGTGTACATATATCAT+AGG | + | chr2.3:4626916-4626935 | None:intergenic | 20.0% |
| !!! | TACGTTATCTATATATTTTG+AGG | - | chr2.3:4627421-4627440 | MS.gene068238:CDS | 20.0% |
| !!! | TAGTATTGATATTATGCTTT+TGG | - | chr2.3:4627651-4627670 | MS.gene068238:CDS | 20.0% |
| !!! | TTCATTAACTTGTAAAGTAT+TGG | + | chr2.3:4630110-4630129 | None:intergenic | 20.0% |
| ! | AAATAGCCATCATTATCTTA+TGG | + | chr2.3:4628397-4628416 | None:intergenic | 25.0% |
| ! | AAATCTATGTTATGTTTCCA+AGG | + | chr2.3:4628325-4628344 | None:intergenic | 25.0% |
| ! | ATAAAAGTCGAATACTATTC+TGG | - | chr2.3:4627589-4627608 | MS.gene068238:CDS | 25.0% |
| ! | ATCATTATCTTATGGAAAGA+TGG | + | chr2.3:4628389-4628408 | None:intergenic | 25.0% |
| ! | ATCTTTCCATAAGATAATGA+TGG | - | chr2.3:4628388-4628407 | MS.gene068238:CDS | 25.0% |
| ! | ATTCCAAAATAATCTCAGAA+TGG | - | chr2.3:4628210-4628229 | MS.gene068238:CDS | 25.0% |
| ! | CTATCAAAGATTTAACTGAA+AGG | - | chr2.3:4627773-4627792 | MS.gene068238:CDS | 25.0% |
| ! | CTTAATCAAAAAGAGAAGAA+CGG | - | chr2.3:4629065-4629084 | MS.gene068238:intron | 25.0% |
| ! | CTTTCAGTTAAATCTTTGAT+AGG | + | chr2.3:4627775-4627794 | None:intergenic | 25.0% |
| ! | GGAAAATTAATCTAACTGAA+TGG | + | chr2.3:4627913-4627932 | None:intergenic | 25.0% |
| ! | TCATTATCTTATGGAAAGAT+GGG | + | chr2.3:4628388-4628407 | None:intergenic | 25.0% |
| ! | TGATATTTCATATTGTCATG+TGG | + | chr2.3:4627389-4627408 | None:intergenic | 25.0% |
| ! | TGGAAATGAGAAATAATTTG+AGG | + | chr2.3:4628348-4628367 | None:intergenic | 25.0% |
| ! | TTCTGTGTGAATTTCATATA+CGG | + | chr2.3:4626831-4626850 | None:intergenic | 25.0% |
| !! | AACTTCAGAAATTTTATTGG+AGG | + | chr2.3:4627087-4627106 | None:intergenic | 25.0% |
| !! | ATGTATATTCGACTTTTCTT+TGG | + | chr2.3:4627941-4627960 | None:intergenic | 25.0% |
| !! | ATTTCTTTAACTTCAAGCTT+CGG | + | chr2.3:4628600-4628619 | None:intergenic | 25.0% |
| !! | GACATTTTATATCTCATCTT+TGG | - | chr2.3:4628102-4628121 | MS.gene068238:CDS | 25.0% |
| !! | GGTAACTTCAGAAATTTTAT+TGG | + | chr2.3:4627090-4627109 | None:intergenic | 25.0% |
| !! | TATTCTTCTTTGAGTTTAGA+TGG | + | chr2.3:4630073-4630092 | None:intergenic | 25.0% |
| !! | TGTAACTTCAGAAATTTTAC+TGG | + | chr2.3:4627117-4627136 | None:intergenic | 25.0% |
| !!! | AATCCATTCTGAGATTATTT+TGG | + | chr2.3:4628216-4628235 | None:intergenic | 25.0% |
| !!! | TCTGAGATTATTTTGGAATA+AGG | + | chr2.3:4628209-4628228 | None:intergenic | 25.0% |
| AGTTATTCACATCCATATCA+TGG | + | chr2.3:4629319-4629338 | None:intergenic | 30.0% | |
| ATATACATTGTTTGCATACC+AGG | - | chr2.3:4627953-4627972 | MS.gene068238:CDS | 30.0% | |
| CTTAATCAGAAAGAGAACAA+CGG | - | chr2.3:4628876-4628895 | MS.gene068238:intron | 30.0% | |
| CTTAATCAGAAAGAGAAGAA+CGG | - | chr2.3:4628687-4628706 | MS.gene068238:CDS | 30.0% | |
| CTTGATCAAAAAGAGAAGAA+CGG | - | chr2.3:4629632-4629651 | MS.gene068238:intron | 30.0% | |
| TGTCAAGAAAGATCATGATA+TGG | - | chr2.3:4629115-4629134 | MS.gene068238:CDS | 30.0% | |
| ! | AACTTCAGAAATTTTACTGG+AGG | + | chr2.3:4627114-4627133 | None:intergenic | 30.0% |
| ! | AATTGGTATGGTTTTCCTAT+TGG | - | chr2.3:4627804-4627823 | MS.gene068238:CDS | 30.0% |
| ! | GTCATTGATTGAAAAAGAAG+TGG | - | chr2.3:4627058-4627077 | MS.gene068238:CDS | 30.0% |
| ! | TAATCTCAGAATGGATTTCT+AGG | - | chr2.3:4628219-4628238 | MS.gene068238:CDS | 30.0% |
| ! | TCTTATTTCACCTTATGAAC+AGG | - | chr2.3:4627622-4627641 | MS.gene068238:CDS | 30.0% |
| ! | TTTCCAAGGCTTTAATTATG+AGG | + | chr2.3:4628311-4628330 | None:intergenic | 30.0% |
| ! | TTTCTTTAACTTCAAGCTTC+GGG | + | chr2.3:4628599-4628618 | None:intergenic | 30.0% |
| !! | AAGAAGTGTTCCTAATATAG+AGG | - | chr2.3:4626944-4626963 | MS.gene068238:CDS | 30.0% |
| !! | AGAAGTGTTCCTAATATAGA+GGG | - | chr2.3:4626945-4626964 | MS.gene068238:CDS | 30.0% |
| !!! | ATTTTGGTTCTATCACTGAT+GGG | - | chr2.3:4627030-4627049 | MS.gene068238:CDS | 30.0% |
| !!! | TGAATTTTGCAAGTTGATTG+TGG | - | chr2.3:4626785-4626804 | MS.gene068238:CDS | 30.0% |
| AAGGTTCGTTACAATTGGTA+TGG | - | chr2.3:4627792-4627811 | MS.gene068238:CDS | 35.0% | |
| ACTATTGACACCTGTTCATA+AGG | + | chr2.3:4627635-4627654 | None:intergenic | 35.0% | |
| ACTGAAAGGTTCGTTACAAT+TGG | - | chr2.3:4627787-4627806 | MS.gene068238:CDS | 35.0% | |
| AGAAATTCATGTAAGTAGCG+AGG | - | chr2.3:4628614-4628633 | MS.gene068238:intron | 35.0% | |
| AGAATCACATATAAGTAGCG+AGG | - | chr2.3:4628506-4628525 | MS.gene068238:intron | 35.0% | |
| AGAATCACATGTAAGTAGAG+AGG | - | chr2.3:4629937-4629956 | MS.gene068238:CDS | 35.0% | |
| AGAATCACATGTAAGTAGTG+AGG | - | chr2.3:4628992-4629011 | MS.gene068238:intron | 35.0% | |
| AGTTATCCACATCCATATCA+TGG | + | chr2.3:4629130-4629149 | None:intergenic | 35.0% | |
| ATTCTGTAACTTCAAGCTTC+GGG | + | chr2.3:4628491-4628510 | None:intergenic | 35.0% | |
| CTAAATTGGGCATCAGAAAA+GGG | + | chr2.3:4628263-4628282 | None:intergenic | 35.0% | |
| CTTAATCAGAAAGAGGACAA+CGG | - | chr2.3:4629254-4629273 | MS.gene068238:intron | 35.0% | |
| GAAAGATCATGATATGGATG+TGG | - | chr2.3:4629121-4629140 | MS.gene068238:CDS | 35.0% | |
| GAAATTCATGTAAGTAGCGA+GGG | - | chr2.3:4628615-4628634 | MS.gene068238:intron | 35.0% | |
| GAATCACATGTAAGTAGTGA+GGG | - | chr2.3:4628993-4629012 | MS.gene068238:intron | 35.0% | |
| GATTCTGTAACTTCAAGCTT+CGG | + | chr2.3:4628492-4628511 | None:intergenic | 35.0% | |
| GTTACAATAGTATCACTGCA+TGG | + | chr2.3:4628666-4628685 | None:intergenic | 35.0% | |
| TCTAAATTGGGCATCAGAAA+AGG | + | chr2.3:4628264-4628283 | None:intergenic | 35.0% | |
| TGACCTCATAATTAAAGCCT+TGG | - | chr2.3:4628305-4628324 | MS.gene068238:CDS | 35.0% | |
| TGCAATCTTTCTGTAGAAGA+AGG | + | chr2.3:4627266-4627285 | None:intergenic | 35.0% | |
| TGTCAAGAAAGATCATGGTA+TGG | - | chr2.3:4629682-4629701 | MS.gene068238:CDS | 35.0% | |
| TTAGAAGTGAAGACAATTCC+TGG | + | chr2.3:4627974-4627993 | None:intergenic | 35.0% | |
| TTCATATACGGTAACAAAGC+TGG | + | chr2.3:4626819-4626838 | None:intergenic | 35.0% | |
| TTTCCATTGATGCGAAGAAA+AGG | - | chr2.3:4627870-4627889 | MS.gene068238:CDS | 35.0% | |
| TTTCTGATTAAGAGCTGCAA+TGG | + | chr2.3:4629246-4629265 | None:intergenic | 35.0% | |
| ! | AAACCTTTTCTTCGCATCAA+TGG | + | chr2.3:4627876-4627895 | None:intergenic | 35.0% |
| ! | ATTCGACTTTTCTTTGGACA+AGG | + | chr2.3:4627935-4627954 | None:intergenic | 35.0% |
| ! | GAAGTGTTCCTAATATAGAG+GGG | - | chr2.3:4626946-4626965 | MS.gene068238:CDS | 35.0% |
| ! | TAGTTTGCAAGATTCAAAGC+TGG | - | chr2.3:4628452-4628471 | MS.gene068238:CDS | 35.0% |
| ! | TTCAGAAATTTTACTGGAGG+TGG | + | chr2.3:4627111-4627130 | None:intergenic | 35.0% |
| ! | TTCGACTTTTCTTTGGACAA+GGG | + | chr2.3:4627934-4627953 | None:intergenic | 35.0% |
| !! | AAGTATTGGCAATATGCTTC+TGG | + | chr2.3:4630096-4630115 | None:intergenic | 35.0% |
| !!! | CATTTTGGTTCTATCACTGA+TGG | - | chr2.3:4627029-4627048 | MS.gene068238:CDS | 35.0% |
| !!! | TTTTGGAATAAGGAAGCATG+TGG | + | chr2.3:4628199-4628218 | None:intergenic | 35.0% |
| !!! | TTTTGGTTCTATCACTGATG+GGG | - | chr2.3:4627031-4627050 | MS.gene068238:CDS | 35.0% |
| ACATTTGATCCGTTTCTCGA+AGG | + | chr2.3:4627182-4627201 | None:intergenic | 40.0% | |
| AGAATCACATGTAAGTAGCG+AGG | - | chr2.3:4629181-4629200 | MS.gene068238:CDS | 40.0% | |
| AGCTGGATATTCTGCTGTTA+AGG | - | chr2.3:4627223-4627242 | MS.gene068238:CDS | 40.0% | |
| CCTTCTTACTATCGACCAAA+AGG | + | chr2.3:4626995-4627014 | None:intergenic | 40.0% | |
| CCTTTGGTCAAAAGAAGTTC+TGG | - | chr2.3:4628140-4628159 | MS.gene068238:CDS | 40.0% | |
| CTTACTATCGACCAAAAGGA+CGG | + | chr2.3:4626991-4627010 | None:intergenic | 40.0% | |
| CTTCGCATCAATGGAAAAAC+CGG | + | chr2.3:4627867-4627886 | None:intergenic | 40.0% | |
| CTTGATCAGAAAGAGAACAG+CGG | - | chr2.3:4629974-4629993 | MS.gene068238:CDS | 40.0% | |
| GAAAGACCATGATATGGATG+TGG | - | chr2.3:4629310-4629329 | MS.gene068238:intron | 40.0% | |
| GAAAGATCATGGTATGGATG+TGG | - | chr2.3:4629688-4629707 | MS.gene068238:CDS | 40.0% | |
| GAATCACATGTAAGTAGCGA+GGG | - | chr2.3:4629182-4629201 | MS.gene068238:CDS | 40.0% | |
| GAATCCAGAGCTAGAATTTG+TGG | - | chr2.3:4626755-4626774 | MS.gene068238:CDS | 40.0% | |
| GGTCAAGAAAGACCATGATA+TGG | - | chr2.3:4629304-4629323 | MS.gene068238:intron | 40.0% | |
| GGTTCTGTCAAGAAAGATCA+TGG | - | chr2.3:4629110-4629129 | MS.gene068238:CDS | 40.0% | |
| GTCATGTGGACATCTTTACT+AGG | + | chr2.3:4627375-4627394 | None:intergenic | 40.0% | |
| GTTAAGAAGCCTTCGAGAAA+CGG | - | chr2.3:4627170-4627189 | MS.gene068238:CDS | 40.0% | |
| GTTACAATAGTTTCGCTGCA+TGG | + | chr2.3:4628558-4628577 | None:intergenic | 40.0% | |
| GTTATCAAGACCAACAGACA+GGG | + | chr2.3:4628532-4628551 | None:intergenic | 40.0% | |
| TACAATCATGCAGTGTGGTT+CGG | - | chr2.3:4629850-4629869 | MS.gene068238:CDS | 40.0% | |
| TGATTCTGTCAAGAAAGACG+AGG | - | chr2.3:4628920-4628939 | MS.gene068238:intron | 40.0% | |
| TGCAGCTCTTAATCAGAAAG+AGG | - | chr2.3:4629247-4629266 | MS.gene068238:intron | 40.0% | |
| TGCGATACAATTACACAGTG+TGG | - | chr2.3:4628711-4628730 | MS.gene068238:CDS | 40.0% | |
| TGTCAAGAAAGACGAGGATA+GGG | - | chr2.3:4628737-4628756 | MS.gene068238:CDS | 40.0% | |
| TGTCAAGAAAGACGAGGATA+TGG | - | chr2.3:4628737-4628756 | MS.gene068238:CDS | 40.0% | |
| TGTTATCAAGACCAACAGAC+AGG | + | chr2.3:4628533-4628552 | None:intergenic | 40.0% | |
| ! | CCAGAACTTCTTTTGACCAA+AGG | + | chr2.3:4628143-4628162 | None:intergenic | 40.0% |
| ! | CCTTTTGGTCGATAGTAAGA+AGG | - | chr2.3:4626992-4627011 | MS.gene068238:CDS | 40.0% |
| ! | CTCAGAATGGATTTCTAGGT+TGG | - | chr2.3:4628223-4628242 | MS.gene068238:CDS | 40.0% |
| ! | GAAGATCGAATTTTGCAAGC+TGG | - | chr2.3:4627206-4627225 | MS.gene068238:CDS | 40.0% |
| ! | GAGAACTGCTTCTTGCATTT+TGG | - | chr2.3:4627014-4627033 | MS.gene068238:CDS | 40.0% |
| ! | GGGCAAAAGAGAGCATAAAA+TGG | + | chr2.3:4628368-4628387 | None:intergenic | 40.0% |
| ! | TACACAGTGTAGTTCTGTCA+AGG | - | chr2.3:4630009-4630028 | MS.gene068238:CDS | 40.0% |
| ! | TCAAAAGAAGTTCTGGCAGT+TGG | - | chr2.3:4628147-4628166 | MS.gene068238:CDS | 40.0% |
| ! | TTCAAAAGTTGCCGTCCTTT+TGG | - | chr2.3:4626977-4626996 | MS.gene068238:CDS | 40.0% |
| !! | AAGGACGGCAACTTTTGAAA+TGG | + | chr2.3:4626976-4626995 | None:intergenic | 40.0% |
| !! | AATGCCACAAATTCTAGCTC+TGG | + | chr2.3:4626762-4626781 | None:intergenic | 40.0% |
| !!! | AGGACGGCAACTTTTGAAAT+GGG | + | chr2.3:4626975-4626994 | None:intergenic | 40.0% |
| AAGCTGTCTTCTCTTTGCTC+TGG | + | chr2.3:4627696-4627715 | None:intergenic | 45.0% | |
| AGCTGTCTTCTCTTTGCTCT+GGG | + | chr2.3:4627695-4627714 | None:intergenic | 45.0% | |
| AGTAGAGAGGTCATGTCTGT+TGG | - | chr2.3:4629950-4629969 | MS.gene068238:CDS | 45.0% | |
| AGTTGTCCACATCCATATCC+TGG | + | chr2.3:4630039-4630058 | None:intergenic | 45.0% | |
| ATTGGCTGATCACTGTCTCA+AGG | - | chr2.3:4627822-4627841 | MS.gene068238:CDS | 45.0% | |
| CAAAAAGAGAAGAACGGCTG+CGG | - | chr2.3:4629071-4629090 | MS.gene068238:intron | 45.0% | |
| CAGAAAGAGAACAACGGTTG+CGG | - | chr2.3:4628882-4628901 | MS.gene068238:intron | 45.0% | |
| CTGTCAAGAAAGACGAGGAT+AGG | - | chr2.3:4628736-4628755 | MS.gene068238:CDS | 45.0% | |
| GAAAGACGAGGATATGGATG+TGG | - | chr2.3:4628743-4628762 | MS.gene068238:CDS | 45.0% | |
| GAAGCACATGCAAGTAGTGA+GGG | - | chr2.3:4628804-4628823 | MS.gene068238:intron | 45.0% | |
| GCTGCAATAGTATCACTGCA+TGG | + | chr2.3:4629422-4629441 | None:intergenic | 45.0% | |
| GCTGCAATGGTATCATTGCA+TGG | + | chr2.3:4629233-4629252 | None:intergenic | 45.0% | |
| GTGAATTGCGTAACTGTGTC+CGG | - | chr2.3:4627845-4627864 | MS.gene068238:CDS | 45.0% | |
| GTGTTCCTAATATAGAGGGG+TGG | - | chr2.3:4626949-4626968 | MS.gene068238:CDS | 45.0% | |
| GTTCTATCACTGATGGGGTA+CGG | - | chr2.3:4627036-4627055 | MS.gene068238:CDS | 45.0% | |
| TACAATCACGCAGTGTGGTT+CGG | - | chr2.3:4629283-4629302 | MS.gene068238:intron | 45.0% | |
| TCCACATCAACAAGGTCAAC+AGG | + | chr2.3:4626855-4626874 | None:intergenic | 45.0% | |
| TCTCATCTTTGGATAGCGTC+CGG | - | chr2.3:4628113-4628132 | MS.gene068238:CDS | 45.0% | |
| TGAATGTACAAGACCTAGCG+AGG | - | chr2.3:4630171-4630190 | MS.gene068238:CDS | 45.0% | |
| TGAGACAGTGATCAGCCAAT+AGG | + | chr2.3:4627822-4627841 | None:intergenic | 45.0% | |
| TGCGGTACAATTACTCAGTG+TGG | - | chr2.3:4629089-4629108 | MS.gene068238:intron | 45.0% | |
| TGTCAAGGAAGACCAGGATA+TGG | - | chr2.3:4630024-4630043 | MS.gene068238:CDS | 45.0% | |
| TTCTGCTGTTAAGGAAGCTG+CGG | - | chr2.3:4627232-4627251 | MS.gene068238:CDS | 45.0% | |
| TTGGCTGATCACTGTCTCAA+GGG | - | chr2.3:4627823-4627842 | MS.gene068238:CDS | 45.0% | |
| ! | AGAAGCACATGCAAGTAGTG+AGG | - | chr2.3:4628803-4628822 | MS.gene068238:intron | 45.0% |
| ! | TAGTTCTGTCAAGGAAGACC+AGG | - | chr2.3:4630018-4630037 | MS.gene068238:CDS | 45.0% |
| ! | TGGTTCTGTCAAGAAAGACG+AGG | - | chr2.3:4628731-4628750 | MS.gene068238:CDS | 45.0% |
| !! | GCTCTGGATTCTGTTTTCTG+TGG | + | chr2.3:4626746-4626765 | None:intergenic | 45.0% |
| !! | GGCTTGTTATCATGACCAAC+AGG | + | chr2.3:4628834-4628853 | None:intergenic | 45.0% |
| ACTGCAGCTCCACATCAACA+AGG | + | chr2.3:4626863-4626882 | None:intergenic | 50.0% | |
| ATGGGCCACCCCTCTATATT+AGG | + | chr2.3:4626957-4626976 | None:intergenic | 50.0% | |
| CAGAAAGAGGACAACGGTTG+CGG | - | chr2.3:4629260-4629279 | MS.gene068238:intron | 50.0% | |
| CTCATCTTTGGATAGCGTCC+GGG | - | chr2.3:4628114-4628133 | MS.gene068238:CDS | 50.0% | |
| GAAAGACGAGGATAGGGATG+TGG | - | chr2.3:4628932-4628951 | MS.gene068238:intron | 50.0% | |
| GCCTGTTGACCTTGTTGATG+TGG | - | chr2.3:4626851-4626870 | MS.gene068238:CDS | 50.0% | |
| GCTCACAGTCGATCAGTGAA+GGG | - | chr2.3:4627737-4627756 | MS.gene068238:CDS | 50.0% | |
| GCTGCGATAGTATCACTGCA+TGG | + | chr2.3:4628855-4628874 | None:intergenic | 50.0% | |
| GGAAGACCAGGATATGGATG+TGG | - | chr2.3:4630030-4630049 | MS.gene068238:CDS | 50.0% | |
| TCATCTTTGGATAGCGTCCG+GGG | - | chr2.3:4628115-4628134 | MS.gene068238:CDS | 50.0% | |
| TCTGCTGTTAAGGAAGCTGC+GGG | - | chr2.3:4627233-4627252 | MS.gene068238:CDS | 50.0% | |
| TGCGGTACAATCATGCAGTG+TGG | - | chr2.3:4629845-4629864 | MS.gene068238:CDS | 50.0% | |
| TGCTCACAGTCGATCAGTGA+AGG | - | chr2.3:4627736-4627755 | MS.gene068238:CDS | 50.0% | |
| ! | AGTAGTGAGGGCATGTCTGT+TGG | - | chr2.3:4629005-4629024 | MS.gene068238:intron | 50.0% |
| ! | TCTTTTGACCAAAGGACCCC+CGG | + | chr2.3:4628135-4628154 | None:intergenic | 50.0% |
| !! | GTGGAAGTACTCGACAACTG+AGG | + | chr2.3:4628180-4628199 | None:intergenic | 50.0% |
| CATCTTTGGATAGCGTCCGG+GGG | - | chr2.3:4628116-4628135 | MS.gene068238:CDS | 55.0% | |
| TGCGGTACAATCACGCAGTG+TGG | - | chr2.3:4629278-4629297 | MS.gene068238:intron | 55.0% | |
| ! | AGTAGCGAGGGCATGTCTGT+TGG | - | chr2.3:4629194-4629213 | MS.gene068238:CDS | 55.0% |
| ! | AGTAGTGAGGGCATGCCTGT+TGG | - | chr2.3:4628816-4628835 | MS.gene068238:intron | 55.0% |
| AGTAGCGAGGCCCTGTCTGT+TGG | - | chr2.3:4628519-4628538 | MS.gene068238:intron | 60.0% | |
| ! | AGTAGCGAGGGCATGTCTGC+TGG | - | chr2.3:4628627-4628646 | MS.gene068238:intron | 60.0% |
| GATAGCGTCCGGGGGTCCTT+TGG | - | chr2.3:4628124-4628143 | MS.gene068238:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 4626711 | 4630198 | 4626711 | ID=MS.gene068238 |
| chr2.3 | mRNA | 4626711 | 4630198 | 4626711 | ID=MS.gene068238.t1;Parent=MS.gene068238 |
| chr2.3 | exon | 4629655 | 4630198 | 4629655 | ID=MS.gene068238.t1.exon1;Parent=MS.gene068238.t1 |
| chr2.3 | CDS | 4629655 | 4630198 | 4629655 | ID=cds.MS.gene068238.t1;Parent=MS.gene068238.t1 |
| chr2.3 | exon | 4629101 | 4629265 | 4629101 | ID=MS.gene068238.t1.exon2;Parent=MS.gene068238.t1 |
| chr2.3 | CDS | 4629101 | 4629265 | 4629101 | ID=cds.MS.gene068238.t1;Parent=MS.gene068238.t1 |
| chr2.3 | exon | 4628669 | 4628780 | 4628669 | ID=MS.gene068238.t1.exon3;Parent=MS.gene068238.t1 |
| chr2.3 | CDS | 4628669 | 4628780 | 4628669 | ID=cds.MS.gene068238.t1;Parent=MS.gene068238.t1 |
| chr2.3 | exon | 4626711 | 4628472 | 4626711 | ID=MS.gene068238.t1.exon4;Parent=MS.gene068238.t1 |
| chr2.3 | CDS | 4626711 | 4628472 | 4626711 | ID=cds.MS.gene068238.t1;Parent=MS.gene068238.t1 |
| Gene Sequence |
| Protein sequence |
