Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068788.t1 | XP_013464730.1 | 93.6 | 280 | 18 | 0 | 6 | 285 | 110 | 389 | 2.60E-135 | 491.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068788.t1 | Q84WQ5 | 51.4 | 286 | 124 | 6 | 6 | 283 | 110 | 388 | 6.5e-66 | 252.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068788.t1 | A0A072VKT6 | 93.6 | 280 | 18 | 0 | 6 | 285 | 110 | 389 | 1.9e-135 | 491.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049180 | MS.gene068788 | 0.80699 | 6.29E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene068788 | -0.833592 | 4.88E-56 | -1.69E-46 |
| MS.gene050496 | MS.gene068788 | -0.813623 | 2.33E-51 | -1.69E-46 |
| MS.gene050577 | MS.gene068788 | -0.812487 | 4.14E-51 | -1.69E-46 |
| MS.gene053083 | MS.gene068788 | 0.819256 | 1.28E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene068788 | -0.806749 | 7.07E-50 | -1.69E-46 |
| MS.gene055251 | MS.gene068788 | 0.808438 | 3.10E-50 | -1.69E-46 |
| MS.gene055648 | MS.gene068788 | 0.804059 | 2.59E-49 | -1.69E-46 |
| MS.gene055765 | MS.gene068788 | 0.80195 | 7.07E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene068788 | -0.813157 | 2.95E-51 | -1.69E-46 |
| MS.gene056266 | MS.gene068788 | -0.834499 | 2.89E-56 | -1.69E-46 |
| MS.gene059837 | MS.gene068788 | -0.865277 | 6.64E-65 | -1.69E-46 |
| MS.gene060076 | MS.gene068788 | 0.841653 | 4.17E-58 | -1.69E-46 |
| MS.gene06077 | MS.gene068788 | -0.81292 | 3.32E-51 | -1.69E-46 |
| MS.gene060982 | MS.gene068788 | -0.809133 | 2.20E-50 | -1.69E-46 |
| MS.gene061044 | MS.gene068788 | 0.806325 | 8.69E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068788.t1 | MTR_2g079630 | 97.500 | 280 | 7 | 0 | 6 | 285 | 110 | 389 | 0.0 | 552 |
| MS.gene068788.t1 | MTR_2g079650 | 82.562 | 281 | 44 | 2 | 6 | 285 | 109 | 385 | 2.07e-155 | 439 |
| MS.gene068788.t1 | MTR_2g013110 | 47.703 | 283 | 129 | 4 | 6 | 283 | 125 | 393 | 8.85e-77 | 239 |
| MS.gene068788.t1 | MTR_7g079680 | 29.618 | 314 | 147 | 13 | 5 | 275 | 114 | 396 | 3.00e-20 | 90.1 |
| MS.gene068788.t1 | MTR_7g079680 | 31.780 | 236 | 130 | 9 | 51 | 275 | 61 | 276 | 2.58e-18 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068788.t1 | AT4G27460 | 53.147 | 286 | 119 | 6 | 6 | 283 | 110 | 388 | 7.37e-82 | 252 |
| MS.gene068788.t1 | AT5G53750 | 48.667 | 300 | 123 | 8 | 6 | 283 | 115 | 405 | 2.78e-69 | 220 |
| MS.gene068788.t1 | AT1G65320 | 26.984 | 315 | 154 | 11 | 5 | 275 | 117 | 399 | 2.75e-16 | 79.0 |
Find 78 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTTGATGATACAGCTTAT+TGG | 0.263301 | 2.3:+18035026 | MS.gene068788:intron |
| CGATGACCTTGCATACTTTC+CGG | 0.310170 | 2.3:-18035664 | None:intergenic |
| AAGGTTGAAGGAAATGAATT+TGG | 0.316598 | 2.3:+18035539 | MS.gene068788:CDS |
| CACAGCAATCAAAGAGCTCT+TGG | 0.367612 | 2.3:-18035736 | None:intergenic |
| GAGGATGATTGGAGTTTAGT+TGG | 0.388830 | 2.3:+18035804 | MS.gene068788:CDS |
| GCCCTCCAGAGGATCTAGTT+AGG | 0.395318 | 2.3:+18035505 | MS.gene068788:CDS |
| CTCTACATTCCTCACATACT+TGG | 0.414784 | 2.3:-18035697 | None:intergenic |
| TGTGGGTTATTGAGGATGAT+TGG | 0.421114 | 2.3:+18035793 | MS.gene068788:CDS |
| GCCATCACAACTTTGTCTGC+AGG | 0.430978 | 2.3:+18035453 | MS.gene068788:CDS |
| CTTCAACAGCAGAAGACGCC+TGG | 0.435308 | 2.3:-18035314 | None:intergenic |
| GATGTGATCAGGTTCTTACT+TGG | 0.466946 | 2.3:+18035201 | MS.gene068788:CDS |
| TAATAGAGTGAATTACTTGT+GGG | 0.472091 | 2.3:+18035776 | MS.gene068788:CDS |
| CTCCATTGATTACTCTTCCC+AGG | 0.476252 | 2.3:+18035296 | MS.gene068788:CDS |
| GGTTGTAAAGGCAAGGTTGA+AGG | 0.477069 | 2.3:+18035527 | MS.gene068788:CDS |
| GCCATTGATCTCATACTTGA+GGG | 0.480304 | 2.3:+18035051 | MS.gene068788:CDS |
| CGAATTGATTGACATGGAAA+GGG | 0.483775 | 2.3:+18034890 | None:intergenic |
| GAATTACTTGTGGGTTATTG+AGG | 0.486011 | 2.3:+18035785 | MS.gene068788:CDS |
| AGGTTCTTACTTGGTTCCAT+TGG | 0.493319 | 2.3:+18035210 | MS.gene068788:CDS |
| GCGAGGAGTTTGACACGGTC+CGG | 0.494146 | 2.3:+18035645 | MS.gene068788:CDS |
| TTCATCTGATGAGGACAGTC+CGG | 0.496147 | 2.3:+18035623 | MS.gene068788:CDS |
| CCGAATTGATTGACATGGAA+AGG | 0.498180 | 2.3:+18034889 | None:intergenic |
| CCCTCCAGAGGATCTAGTTA+GGG | 0.498391 | 2.3:+18035506 | MS.gene068788:CDS |
| AGACGATCGATGGATTGTGC+AGG | 0.510025 | 2.3:-18035249 | None:intergenic |
| GTTGCAATTGTCGACGGTGA+TGG | 0.521762 | 2.3:+18035369 | MS.gene068788:CDS |
| GGATCTAGTTAGGGTTGTAA+AGG | 0.524022 | 2.3:+18035515 | MS.gene068788:CDS |
| CCATCACAACTTTGTCTGCA+GGG | 0.524200 | 2.3:+18035454 | MS.gene068788:CDS |
| ACAGCAATCAAAGAGCTCTT+GGG | 0.525945 | 2.3:-18035735 | None:intergenic |
| TTGTGTGAGGGACTTTGAGA+TGG | 0.531894 | 2.3:-18035337 | None:intergenic |
| CCCCTCAAGTATGAGATCAA+TGG | 0.534194 | 2.3:-18035052 | None:intergenic |
| CTAATAGAGTGAATTACTTG+TGG | 0.535417 | 2.3:+18035775 | MS.gene068788:CDS |
| ACAACCCTAACTAGATCCTC+TGG | 0.535562 | 2.3:-18035510 | None:intergenic |
| TGCCATTGATCTCATACTTG+AGG | 0.539564 | 2.3:+18035050 | MS.gene068788:CDS |
| TTGCAATTGTCGACGGTGAT+GGG | 0.542443 | 2.3:+18035370 | MS.gene068788:CDS |
| GACGGTGATGGGACATTCAT+CGG | 0.542508 | 2.3:+18035381 | MS.gene068788:CDS |
| CCCTGCAGACAAAGTTGTGA+TGG | 0.549793 | 2.3:-18035454 | None:intergenic |
| CATCACAACTTTGTCTGCAG+GGG | 0.550293 | 2.3:+18035455 | MS.gene068788:CDS |
| TAACACAAGAGGATGTGATC+AGG | 0.550433 | 2.3:+18035190 | MS.gene068788:CDS |
| GATAATATTGAGACGATCGA+TGG | 0.553025 | 2.3:-18035259 | None:intergenic |
| GAGTGCACTGAAGCGGCCAA+TGG | 0.559548 | 2.3:-18035226 | None:intergenic |
| ACAACGGTGTTGAGTTCTGT+TGG | 0.560590 | 2.3:+18035166 | MS.gene068788:CDS |
| TGCAAGGTCATCGAGTTACT+CGG | 0.561913 | 2.3:+18035674 | MS.gene068788:CDS |
| CGCCTGGGAAGAGTAATCAA+TGG | 0.562410 | 2.3:-18035298 | None:intergenic |
| ATCACAACATGCAAGTGTGA+AGG | 0.567692 | 2.3:-18035415 | None:intergenic |
| TAGTTAGGGTTGTAAAGGCA+AGG | 0.569328 | 2.3:+18035520 | MS.gene068788:CDS |
| CAACAGAAGTTTGTTGTGTG+AGG | 0.577183 | 2.3:-18035350 | None:intergenic |
| ATCCTCCTCTTCATCTGATG+AGG | 0.578040 | 2.3:+18035614 | MS.gene068788:CDS |
| GACCGTGTCAAACTCCTCGC+CGG | 0.578167 | 2.3:-18035642 | None:intergenic |
| ATCACAACTTTGTCTGCAGG+GGG | 0.584206 | 2.3:+18035456 | MS.gene068788:CDS |
| TCGTCTCAATATTATCAGCT+CGG | 0.585428 | 2.3:+18035266 | MS.gene068788:CDS |
| GTTCTGTTGGTTAACACAAG+AGG | 0.588395 | 2.3:+18035179 | MS.gene068788:CDS |
| TTCAACAGCAGAAGACGCCT+GGG | 0.592455 | 2.3:-18035313 | None:intergenic |
| GTGCAGGGAGTGCACTGAAG+CGG | 0.593463 | 2.3:-18035233 | None:intergenic |
| GTCCTCATCAGATGAAGAGG+AGG | 0.596841 | 2.3:-18035616 | None:intergenic |
| TCACAACATGCAAGTGTGAA+GGG | 0.596883 | 2.3:-18035414 | None:intergenic |
| ACTGTCCTCATCAGATGAAG+AGG | 0.604105 | 2.3:-18035619 | None:intergenic |
| GACGATCGATGGATTGTGCA+GGG | 0.604203 | 2.3:-18035248 | None:intergenic |
| TGCAGACAAAGTTGTGATGG+CGG | 0.609998 | 2.3:-18035451 | None:intergenic |
| AACAGAAGTTTGTTGTGTGA+GGG | 0.614439 | 2.3:-18035349 | None:intergenic |
| CACGGTCCGGAAAGTATGCA+AGG | 0.614793 | 2.3:+18035658 | MS.gene068788:CDS |
| AGGGCGACCACAGTCAATGT+AGG | 0.615124 | 2.3:-18035487 | None:intergenic |
| TGACTGTGGTCGCCCTCCAG+AGG | 0.619657 | 2.3:+18035494 | MS.gene068788:CDS |
| ATGTTGTGATGAGACGGTTG+CGG | 0.621625 | 2.3:+18035428 | MS.gene068788:CDS |
| ACTTCTGTTGCAATTGTCGA+CGG | 0.622534 | 2.3:+18035363 | MS.gene068788:CDS |
| AACAGAACTCAACACCGTTG+TGG | 0.629524 | 2.3:-18035164 | None:intergenic |
| TGATTGACATGGAAAGGGGA+CGG | 0.643465 | 2.3:+18034895 | None:intergenic |
| ACCCTAACTAGATCCTCTGG+AGG | 0.646675 | 2.3:-18035507 | None:intergenic |
| AGAGGAGGATGACATATCAC+CGG | 0.649223 | 2.3:-18035601 | None:intergenic |
| GAATTGATTGACATGGAAAG+GGG | 0.650322 | 2.3:+18034891 | None:intergenic |
| GTTACTCGGCCAAGTATGTG+AGG | 0.653188 | 2.3:+18035688 | MS.gene068788:CDS |
| CATTGATCTCATACTTGAGG+GGG | 0.653452 | 2.3:+18035053 | MS.gene068788:CDS |
| CAAGTATGTGAGGAATGTAG+AGG | 0.658949 | 2.3:+18035698 | MS.gene068788:CDS |
| ACTTGCATGTTGTGATGAGA+CGG | 0.665678 | 2.3:+18035422 | MS.gene068788:CDS |
| CCATTGATCTCATACTTGAG+GGG | 0.673886 | 2.3:+18035052 | MS.gene068788:CDS |
| CCCTAACTAGATCCTCTGGA+GGG | 0.680964 | 2.3:-18035506 | None:intergenic |
| TTGATGGCCTACATTGACTG+TGG | 0.683351 | 2.3:+18035480 | MS.gene068788:CDS |
| GTCCGGCGAGGAGTTTGACA+CGG | 0.708960 | 2.3:+18035640 | MS.gene068788:CDS |
| TTAACAATCAACAGCCACAA+CGG | 0.709558 | 2.3:+18035150 | MS.gene068788:CDS |
| CTGATGAGGACAGTCCGGCG+AGG | 0.730013 | 2.3:+18035628 | MS.gene068788:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACTTTTTCTAATATCTTGA+AGG | + | chr2.3:18035833-18035852 | MS.gene068788:CDS | 20.0% |
| ! | TAATAGAGTGAATTACTTGT+GGG | + | chr2.3:18035776-18035795 | MS.gene068788:CDS | 25.0% |
| !! | AATTTGATGATACAGCTTAT+TGG | + | chr2.3:18035026-18035045 | MS.gene068788:intron | 25.0% |
| AAGGTTGAAGGAAATGAATT+TGG | + | chr2.3:18035539-18035558 | MS.gene068788:CDS | 30.0% | |
| ATTTCGCAAACAAAAAAAGG+TGG | + | chr2.3:18035096-18035115 | MS.gene068788:CDS | 30.0% | |
| CATCAAATTAACAAGAAGCA+AGG | - | chr2.3:18035015-18035034 | None:intergenic | 30.0% | |
| CCAATTTCGCAAACAAAAAA+AGG | + | chr2.3:18035093-18035112 | MS.gene068788:CDS | 30.0% | |
| CTAATAGAGTGAATTACTTG+TGG | + | chr2.3:18035775-18035794 | MS.gene068788:CDS | 30.0% | |
| !!! | CCTTTTTTTGTTTGCGAAAT+TGG | - | chr2.3:18035096-18035115 | None:intergenic | 30.0% |
| CAAAAAAAGGTGGTCTTTCA+AGG | + | chr2.3:18035106-18035125 | MS.gene068788:CDS | 35.0% | |
| GATAATATTGAGACGATCGA+TGG | - | chr2.3:18035262-18035281 | None:intergenic | 35.0% | |
| TCGTCTCAATATTATCAGCT+CGG | + | chr2.3:18035266-18035285 | MS.gene068788:CDS | 35.0% | |
| TTAACAATCAACAGCCACAA+CGG | + | chr2.3:18035150-18035169 | MS.gene068788:CDS | 35.0% | |
| ! | GAATTACTTGTGGGTTATTG+AGG | + | chr2.3:18035785-18035804 | MS.gene068788:CDS | 35.0% |
| !! | AACAGAAGTTTGTTGTGTGA+GGG | - | chr2.3:18035352-18035371 | None:intergenic | 35.0% |
| ACAGCAATCAAAGAGCTCTT+GGG | - | chr2.3:18035738-18035757 | None:intergenic | 40.0% | |
| ACTTCTGTTGCAATTGTCGA+CGG | + | chr2.3:18035363-18035382 | MS.gene068788:CDS | 40.0% | |
| ACTTGCATGTTGTGATGAGA+CGG | + | chr2.3:18035422-18035441 | MS.gene068788:CDS | 40.0% | |
| AGGTTCTTACTTGGTTCCAT+TGG | + | chr2.3:18035210-18035229 | MS.gene068788:CDS | 40.0% | |
| ATCACAACATGCAAGTGTGA+AGG | - | chr2.3:18035418-18035437 | None:intergenic | 40.0% | |
| CAAGTATGTGAGGAATGTAG+AGG | + | chr2.3:18035698-18035717 | MS.gene068788:CDS | 40.0% | |
| CATTGATCTCATACTTGAGG+GGG | + | chr2.3:18035053-18035072 | MS.gene068788:CDS | 40.0% | |
| CCATTGATCTCATACTTGAG+GGG | + | chr2.3:18035052-18035071 | MS.gene068788:CDS | 40.0% | |
| CTCTACATTCCTCACATACT+TGG | - | chr2.3:18035700-18035719 | None:intergenic | 40.0% | |
| GAGGATGATTGGAGTTTAGT+TGG | + | chr2.3:18035804-18035823 | MS.gene068788:CDS | 40.0% | |
| GATGTGATCAGGTTCTTACT+TGG | + | chr2.3:18035201-18035220 | MS.gene068788:CDS | 40.0% | |
| GCCATTGATCTCATACTTGA+GGG | + | chr2.3:18035051-18035070 | MS.gene068788:CDS | 40.0% | |
| GGATCTAGTTAGGGTTGTAA+AGG | + | chr2.3:18035515-18035534 | MS.gene068788:CDS | 40.0% | |
| TAACACAAGAGGATGTGATC+AGG | + | chr2.3:18035190-18035209 | MS.gene068788:CDS | 40.0% | |
| TAGTTAGGGTTGTAAAGGCA+AGG | + | chr2.3:18035520-18035539 | MS.gene068788:CDS | 40.0% | |
| TCACAACATGCAAGTGTGAA+GGG | - | chr2.3:18035417-18035436 | None:intergenic | 40.0% | |
| TGCCATTGATCTCATACTTG+AGG | + | chr2.3:18035050-18035069 | MS.gene068788:CDS | 40.0% | |
| ! | GTTCTGTTGGTTAACACAAG+AGG | + | chr2.3:18035179-18035198 | MS.gene068788:CDS | 40.0% |
| ! | TGTGGGTTATTGAGGATGAT+TGG | + | chr2.3:18035793-18035812 | MS.gene068788:CDS | 40.0% |
| !! | CAACAGAAGTTTGTTGTGTG+AGG | - | chr2.3:18035353-18035372 | None:intergenic | 40.0% |
| !!! | ACGCTTTTGACTTCTTTGAC+CGG | + | chr2.3:18035582-18035601 | MS.gene068788:CDS | 40.0% |
| AACAGAACTCAACACCGTTG+TGG | - | chr2.3:18035167-18035186 | None:intergenic | 45.0% | |
| ACAACCCTAACTAGATCCTC+TGG | - | chr2.3:18035513-18035532 | None:intergenic | 45.0% | |
| ACTGTCCTCATCAGATGAAG+AGG | - | chr2.3:18035622-18035641 | None:intergenic | 45.0% | |
| AGAGGAGGATGACATATCAC+CGG | - | chr2.3:18035604-18035623 | None:intergenic | 45.0% | |
| ATCACAACTTTGTCTGCAGG+GGG | + | chr2.3:18035456-18035475 | MS.gene068788:CDS | 45.0% | |
| ATCCTCCTCTTCATCTGATG+AGG | + | chr2.3:18035614-18035633 | MS.gene068788:CDS | 45.0% | |
| ATGTTGTGATGAGACGGTTG+CGG | + | chr2.3:18035428-18035447 | MS.gene068788:CDS | 45.0% | |
| CACAGCAATCAAAGAGCTCT+TGG | - | chr2.3:18035739-18035758 | None:intergenic | 45.0% | |
| CATCACAACTTTGTCTGCAG+GGG | + | chr2.3:18035455-18035474 | MS.gene068788:CDS | 45.0% | |
| CCATCACAACTTTGTCTGCA+GGG | + | chr2.3:18035454-18035473 | MS.gene068788:CDS | 45.0% | |
| CCCCTCAAGTATGAGATCAA+TGG | - | chr2.3:18035055-18035074 | None:intergenic | 45.0% | |
| CGATGACCTTGCATACTTTC+CGG | - | chr2.3:18035667-18035686 | None:intergenic | 45.0% | |
| GGTTGTAAAGGCAAGGTTGA+AGG | + | chr2.3:18035527-18035546 | MS.gene068788:CDS | 45.0% | |
| TGCAAGGTCATCGAGTTACT+CGG | + | chr2.3:18035674-18035693 | MS.gene068788:CDS | 45.0% | |
| TGCAGACAAAGTTGTGATGG+CGG | - | chr2.3:18035454-18035473 | None:intergenic | 45.0% | |
| TTCATCTGATGAGGACAGTC+CGG | + | chr2.3:18035623-18035642 | MS.gene068788:CDS | 45.0% | |
| TTGCAATTGTCGACGGTGAT+GGG | + | chr2.3:18035370-18035389 | MS.gene068788:CDS | 45.0% | |
| ! | ACAACGGTGTTGAGTTCTGT+TGG | + | chr2.3:18035166-18035185 | MS.gene068788:CDS | 45.0% |
| ! | CTCCATTGATTACTCTTCCC+AGG | + | chr2.3:18035296-18035315 | MS.gene068788:CDS | 45.0% |
| ! | TTGATGGCCTACATTGACTG+TGG | + | chr2.3:18035480-18035499 | MS.gene068788:CDS | 45.0% |
| ! | TTGTGTGAGGGACTTTGAGA+TGG | - | chr2.3:18035340-18035359 | None:intergenic | 45.0% |
| ACCCTAACTAGATCCTCTGG+AGG | - | chr2.3:18035510-18035529 | None:intergenic | 50.0% | |
| CCCTAACTAGATCCTCTGGA+GGG | - | chr2.3:18035509-18035528 | None:intergenic | 50.0% | |
| CCCTCCAGAGGATCTAGTTA+GGG | + | chr2.3:18035506-18035525 | MS.gene068788:CDS | 50.0% | |
| CCCTGCAGACAAAGTTGTGA+TGG | - | chr2.3:18035457-18035476 | None:intergenic | 50.0% | |
| CGCCTGGGAAGAGTAATCAA+TGG | - | chr2.3:18035301-18035320 | None:intergenic | 50.0% | |
| GCCATCACAACTTTGTCTGC+AGG | + | chr2.3:18035453-18035472 | MS.gene068788:CDS | 50.0% | |
| GTCCTCATCAGATGAAGAGG+AGG | - | chr2.3:18035619-18035638 | None:intergenic | 50.0% | |
| GTTACTCGGCCAAGTATGTG+AGG | + | chr2.3:18035688-18035707 | MS.gene068788:CDS | 50.0% | |
| GTTGCAATTGTCGACGGTGA+TGG | + | chr2.3:18035369-18035388 | MS.gene068788:CDS | 50.0% | |
| TTCAACAGCAGAAGACGCCT+GGG | - | chr2.3:18035316-18035335 | None:intergenic | 50.0% | |
| !! | AGACGATCGATGGATTGTGC+AGG | - | chr2.3:18035252-18035271 | None:intergenic | 50.0% |
| !! | GACGATCGATGGATTGTGCA+GGG | - | chr2.3:18035251-18035270 | None:intergenic | 50.0% |
| !! | GACGGTGATGGGACATTCAT+CGG | + | chr2.3:18035381-18035400 | MS.gene068788:CDS | 50.0% |
| AGGGCGACCACAGTCAATGT+AGG | - | chr2.3:18035490-18035509 | None:intergenic | 55.0% | |
| CTTCAACAGCAGAAGACGCC+TGG | - | chr2.3:18035317-18035336 | None:intergenic | 55.0% | |
| GCCCTCCAGAGGATCTAGTT+AGG | + | chr2.3:18035505-18035524 | MS.gene068788:CDS | 55.0% | |
| TTTGTCTGCAGGGGGCTTGA+TGG | + | chr2.3:18035464-18035483 | MS.gene068788:CDS | 55.0% | |
| ! | CACGGTCCGGAAAGTATGCA+AGG | + | chr2.3:18035658-18035677 | MS.gene068788:CDS | 55.0% |
| ! | TGAGGGGGCACAGAATCTTG+TGG | + | chr2.3:18035068-18035087 | MS.gene068788:CDS | 55.0% |
| GACCGTGTCAAACTCCTCGC+CGG | - | chr2.3:18035645-18035664 | None:intergenic | 60.0% | |
| GAGTGCACTGAAGCGGCCAA+TGG | - | chr2.3:18035229-18035248 | None:intergenic | 60.0% | |
| GCGAGGAGTTTGACACGGTC+CGG | + | chr2.3:18035645-18035664 | MS.gene068788:CDS | 60.0% | |
| GTCCGGCGAGGAGTTTGACA+CGG | + | chr2.3:18035640-18035659 | MS.gene068788:CDS | 60.0% | |
| ! | GTGCAGGGAGTGCACTGAAG+CGG | - | chr2.3:18035236-18035255 | None:intergenic | 60.0% |
| CTGATGAGGACAGTCCGGCG+AGG | + | chr2.3:18035628-18035647 | MS.gene068788:CDS | 65.0% | |
| TGACTGTGGTCGCCCTCCAG+AGG | + | chr2.3:18035494-18035513 | MS.gene068788:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 18034903 | 18035884 | 18034903 | ID=MS.gene068788 |
| chr2.3 | mRNA | 18034903 | 18035884 | 18034903 | ID=MS.gene068788.t1;Parent=MS.gene068788 |
| chr2.3 | exon | 18034903 | 18034916 | 18034903 | ID=MS.gene068788.t1.exon1;Parent=MS.gene068788.t1 |
| chr2.3 | CDS | 18034903 | 18034916 | 18034903 | ID=cds.MS.gene068788.t1;Parent=MS.gene068788.t1 |
| chr2.3 | exon | 18035041 | 18035884 | 18035041 | ID=MS.gene068788.t1.exon2;Parent=MS.gene068788.t1 |
| chr2.3 | CDS | 18035041 | 18035884 | 18035041 | ID=cds.MS.gene068788.t1;Parent=MS.gene068788.t1 |
| Gene Sequence |
| Protein sequence |
