AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene050577


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050577.t1 MTR_7g116320 93.188 367 18 3 1 360 1 367 0.0 682
MS.gene050577.t1 MTR_7g116320 81.471 367 17 4 1 360 1 323 0.0 573
MS.gene050577.t1 MTR_1g079780 55.874 349 123 9 13 355 5 328 1.52e-118 346
MS.gene050577.t1 MTR_7g116320 84.133 271 31 3 1 264 1 266 1.39e-112 329
MS.gene050577.t1 MTR_5g010330 38.824 255 121 11 73 298 69 317 4.72e-38 139
MS.gene050577.t1 MTR_1g061530 43.147 197 88 5 74 249 65 258 6.56e-38 139
MS.gene050577.t1 MTR_7g074935 48.168 191 89 6 74 255 60 249 9.38e-36 133
MS.gene050577.t1 MTR_8g098390 38.095 231 110 9 71 276 94 316 6.75e-35 131
MS.gene050577.t1 MTR_8g031100 45.545 202 99 4 62 254 77 276 1.11e-34 130
MS.gene050577.t1 MTR_8g036160 34.304 309 161 10 60 339 56 351 9.94e-33 125
MS.gene050577.t1 MTR_7g077120 41.546 207 106 4 71 262 86 292 1.02e-32 125
MS.gene050577.t1 MTR_4g101990 43.269 208 104 5 60 253 58 265 4.80e-32 123
MS.gene050577.t1 MTR_1g076710 41.667 228 97 7 49 249 31 249 8.49e-32 122
MS.gene050577.t1 MTR_6g061670 39.062 192 102 3 73 249 50 241 1.33e-29 116
MS.gene050577.t1 MTR_4g098460 47.244 127 63 2 128 251 73 198 1.76e-29 115
MS.gene050577.t1 MTR_5g011680 35.747 221 101 5 70 249 42 262 2.01e-29 115
MS.gene050577.t1 MTR_6g061670 50.000 120 57 1 133 249 127 246 2.95e-29 115
MS.gene050577.t1 MTR_5g011620 34.483 232 135 6 70 291 42 266 2.83e-28 116
MS.gene050577.t1 MTR_4g098460 45.455 132 63 3 128 251 73 203 3.77e-27 108
MS.gene050577.t1 MTR_4g055833 38.000 200 105 6 63 248 46 240 4.35e-24 101
MS.gene050577.t1 MTR_4g055803 35.922 206 101 6 63 248 49 243 6.31e-24 102
MS.gene050577.t1 MTR_5g011610 36.242 149 91 2 135 281 55 201 1.04e-22 97.4
MS.gene050577.t1 MTR_5g011610 38.333 120 74 0 106 225 182 301 1.65e-18 85.5
MS.gene050577.t1 MTR_1g038960 35.498 231 126 9 40 261 60 276 1.15e-22 97.8
MS.gene050577.t1 MTR_4g055813 43.548 124 67 3 128 248 10 133 1.26e-22 96.7
MS.gene050577.t1 MTR_1g044155 44.248 113 63 0 136 248 153 265 6.73e-21 92.8
MS.gene050577.t1 MTR_1g079810 46.903 113 60 0 136 248 101 213 5.35e-20 89.4
MS.gene050577.t1 MTR_5g014360 37.755 196 105 6 75 257 121 312 6.87e-20 90.5
MS.gene050577.t1 MTR_3g068035 40.351 114 68 0 135 248 105 218 1.13e-19 88.6
MS.gene050577.t1 MTR_1g073860 40.708 113 67 0 136 248 121 233 4.20e-18 84.3
MS.gene050577.t1 MTR_6g060670 32.692 208 99 6 58 248 104 287 5.73e-18 83.6
MS.gene050577.t1 MTR_3g023560 36.364 143 82 3 139 275 65 204 7.24e-18 82.8
MS.gene050577.t1 MTR_8g036060 37.288 118 74 0 131 248 108 225 9.09e-18 83.2
MS.gene050577.t1 MTR_3g100470 35.043 117 72 2 136 248 101 217 2.62e-17 81.6
MS.gene050577.t1 MTR_5g011520 37.288 118 74 0 131 248 122 239 3.45e-17 81.6
MS.gene050577.t1 MTR_7g080980 39.823 113 68 0 136 248 84 196 1.60e-16 79.0
MS.gene050577.t1 MTR_4g098450 39.823 113 68 0 136 248 103 215 1.90e-16 79.3
MS.gene050577.t1 MTR_5g091630 28.326 233 119 5 17 249 3 187 3.48e-16 77.8
MS.gene050577.t1 MTR_4g055705 37.692 130 71 3 133 254 134 261 1.05e-15 77.0
MS.gene050577.t1 MTR_5g041430 31.183 186 106 5 71 244 47 222 1.19e-15 77.4
MS.gene050577.t1 MTR_5g013390 30.131 229 145 6 74 292 81 304 1.40e-13 71.2
MS.gene050577.t1 MTR_5g066020 24.167 240 127 5 16 248 4 195 2.32e-13 69.7
MS.gene050577.t1 MTR_1g038990 31.313 198 113 6 74 266 82 261 3.22e-13 70.1
MS.gene050577.t1 MTR_3g116100 35.659 129 74 4 147 272 154 276 2.73e-12 67.4
MS.gene050577.t1 MTR_5g080580 33.913 115 76 0 134 248 114 228 2.10e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050577.t1 AT3G04590 50.409 367 143 12 30 360 48 411 4.24e-90 276
MS.gene050577.t1 AT3G04590 55.598 259 96 6 30 269 48 306 2.82e-74 233
MS.gene050577.t1 AT5G28590 46.256 227 81 7 126 342 20 215 7.44e-48 161
MS.gene050577.t1 AT4G12080 38.132 257 129 7 74 304 89 341 8.03e-44 155
MS.gene050577.t1 AT4G25320 44.601 213 97 6 58 249 70 282 2.26e-43 155
MS.gene050577.t1 AT2G33620 44.560 193 98 4 71 255 94 285 3.05e-43 153
MS.gene050577.t1 AT2G33620 44.560 193 98 4 71 255 94 285 3.05e-43 153
MS.gene050577.t1 AT2G33620 44.560 193 98 4 71 255 94 285 3.05e-43 153
MS.gene050577.t1 AT2G33620 44.560 193 98 4 71 255 94 285 3.05e-43 153
MS.gene050577.t1 AT2G45850 45.361 194 95 3 72 257 96 286 2.53e-41 148
MS.gene050577.t1 AT2G45850 45.361 194 95 3 72 257 96 286 2.53e-41 148
MS.gene050577.t1 AT2G45850 37.698 252 139 5 12 248 29 277 1.90e-38 139
MS.gene050577.t1 AT5G62260 38.393 224 101 5 63 255 65 282 8.04e-38 140
MS.gene050577.t1 AT5G62260 38.393 224 101 5 63 255 65 282 8.04e-38 140
MS.gene050577.t1 AT1G63480 43.750 192 93 6 73 256 92 276 4.25e-36 134
MS.gene050577.t1 AT1G63480 43.750 192 93 6 73 256 92 276 4.25e-36 134
MS.gene050577.t1 AT1G63480 43.750 192 93 6 73 256 92 276 4.25e-36 134
MS.gene050577.t1 AT1G63480 43.750 192 93 6 73 256 92 276 4.25e-36 134
MS.gene050577.t1 AT1G63480 43.750 192 93 6 73 256 92 276 4.25e-36 134
MS.gene050577.t1 AT1G63480 43.750 192 93 6 73 256 98 282 4.63e-36 134
MS.gene050577.t1 AT1G63480 43.750 192 93 6 73 256 98 282 4.63e-36 134
MS.gene050577.t1 AT5G62260 39.623 212 91 5 63 243 65 270 1.03e-35 132
MS.gene050577.t1 AT5G51590 55.556 117 49 1 136 249 178 294 1.99e-35 134
MS.gene050577.t1 AT4G22770 41.624 197 96 4 72 249 70 266 3.73e-35 131
MS.gene050577.t1 AT4G22770 41.624 197 96 4 72 249 70 266 3.73e-35 131
MS.gene050577.t1 AT4G17950 37.295 244 114 7 73 282 130 368 2.87e-34 131
MS.gene050577.t1 AT5G46640 41.631 233 107 6 73 282 101 327 1.18e-33 129
MS.gene050577.t1 AT3G61310 45.161 186 88 5 73 249 100 280 5.50e-33 126
MS.gene050577.t1 AT1G63470 40.000 190 100 4 73 249 104 292 6.25e-32 124
MS.gene050577.t1 AT4G00200 41.000 200 90 5 74 255 56 245 3.41e-30 117
MS.gene050577.t1 AT4G00200 41.000 200 90 5 74 255 56 245 3.41e-30 117
MS.gene050577.t1 AT3G60870 32.090 134 89 1 115 248 65 196 2.14e-19 87.0
MS.gene050577.t1 AT5G49700 35.833 120 70 2 136 248 83 202 9.74e-18 82.8
MS.gene050577.t1 AT1G76500 36.885 122 68 1 136 248 99 220 2.19e-17 82.0
MS.gene050577.t1 AT4G14465 40.708 113 67 0 136 248 94 206 4.66e-17 80.9
MS.gene050577.t1 AT3G04570 37.705 122 68 1 135 248 106 227 1.15e-15 77.4
MS.gene050577.t1 AT3G55560 38.596 114 69 1 136 248 115 228 2.91e-15 75.9
MS.gene050577.t1 AT2G45430 35.246 122 75 1 131 248 111 232 8.24e-15 74.7
MS.gene050577.t1 AT1G14490 31.667 120 75 2 136 248 49 168 9.41e-15 73.2
MS.gene050577.t1 AT4G12050 33.333 135 89 1 115 248 124 258 1.47e-14 74.3
MS.gene050577.t1 AT4G22810 34.711 121 76 1 131 248 127 247 1.68e-14 73.9
MS.gene050577.t1 AT1G14490 31.933 119 74 2 137 248 31 149 1.68e-14 72.0
MS.gene050577.t1 AT2G36560 30.070 143 94 4 112 249 82 223 9.34e-14 72.8
MS.gene050577.t1 AT4G17800 36.283 113 72 0 136 248 109 221 1.12e-13 71.2
MS.gene050577.t1 AT2G42940 35.965 114 73 0 136 249 80 193 2.56e-13 69.7
MS.gene050577.t1 AT2G35270 35.398 113 73 0 136 248 105 217 2.78e-13 70.1
MS.gene050577.t1 AT4G35390 37.391 115 70 1 136 248 90 204 3.09e-13 70.1

Find 118 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGATATCATTTCGCTTAC+TGG 0.137983 7.3:+1751041 MS.gene050577:CDS
GAACTGGACCAGCAGCTTTA+AGG 0.151788 7.3:-1751163 None:intergenic
TGCAATTTATGCAACAAAAT+AGG 0.176992 7.3:+1750074 MS.gene050577:CDS
GCAATTTATGCAACAAAATA+GGG 0.199709 7.3:+1750075 MS.gene050577:CDS
CAAATTCTCAATCAGGAATT+TGG 0.241504 7.3:-1752042 None:intergenic
CTCCGTCAACCAGCATCTTC+AGG 0.315212 7.3:+1750145 MS.gene050577:CDS
GGTGGAAGAAAGAGCTTAAT+TGG 0.350801 7.3:-1748250 None:intergenic
TTAGCAGCTAGGGCTTGTTC+AGG 0.361515 7.3:-1748488 None:intergenic
GAGAGAATGAGATTTCTTAG+AGG 0.362002 7.3:-1748591 None:intergenic
AGAGCTTAATTGGTTGTCAT+TGG 0.370721 7.3:-1748240 None:intergenic
GTTGCTGGTGTTGTTGTTGT+TGG 0.374911 7.3:-1748283 None:intergenic
AGAGGTAGACCTAGAAAATA+TGG 0.378143 7.3:+1748461 MS.gene050577:CDS
CTCAATATTGCAGGAAGAAC+AGG 0.378174 7.3:+1751980 MS.gene050577:intron
AACTGGACCAGCAGCTTTAA+GGG 0.379611 7.3:-1751162 None:intergenic
CCTTCTAAGATTACCTGAAC+TGG 0.384145 7.3:-1751179 None:intergenic
TAACCAGCATGTCTTGAATC+TGG 0.387032 7.3:-1751871 None:intergenic
CGCTGGAAGAGTCGACTGTT+TGG 0.391063 7.3:-1751735 None:intergenic
CTACCTCTCTTCCTCTTAGC+TGG 0.391774 7.3:-1748446 None:intergenic
GGCGAGCCAGCATCAAGTTT+AGG 0.392871 7.3:+1751706 MS.gene050577:CDS
GGTGGTGGTGGTTGTGGATA+CGG 0.400323 7.3:-1748324 None:intergenic
TAAAGCTGCTGGTCCAGTTC+AGG 0.403368 7.3:+1751166 MS.gene050577:CDS
TGTTCATCATTTCCTCGGAT+TGG 0.407349 7.3:-1751763 None:intergenic
GCCATCTCAAATTCTCAATC+AGG 0.415987 7.3:-1752049 None:intergenic
GACACTAGTGCTGGTGGAAA+AGG 0.420179 7.3:+1751649 MS.gene050577:CDS
CATGTCATTGCTGTTGCTGC+TGG 0.421863 7.3:+1748849 MS.gene050577:CDS
CTTGATGCTGGCTCGCCAAC+TGG 0.422763 7.3:-1751700 None:intergenic
TTCGCCCTCCGGTTTCATTA+CGG 0.428138 7.3:-1751073 None:intergenic
GTTGTTGGTGGTTGTGGTGG+TGG 0.428283 7.3:-1748268 None:intergenic
GTTGTTGTTGTTGGTGGTTG+TGG 0.436641 7.3:-1748274 None:intergenic
GGTGGGCCCCTTAAAGCTGC+TGG 0.437762 7.3:+1751155 MS.gene050577:CDS
TCCTATGTCCGTAATGAAAC+CGG 0.439359 7.3:+1751065 MS.gene050577:CDS
CAAGTTGTTGAATCATGTAA+TGG 0.441011 7.3:-1751804 None:intergenic
GGTGGTTGTGGATACGGTGG+TGG 0.443069 7.3:-1748318 None:intergenic
TGGGGTGATGCAGGCAATGC+AGG 0.457106 7.3:+1748810 MS.gene050577:intron
ATGTGGGACCCATCCGTGTT+TGG 0.457507 7.3:-1748374 None:intergenic
GCTGGTGTTGTTGTTGTTGG+TGG 0.458412 7.3:-1748280 None:intergenic
AATTCTGATGGACAAATCAT+AGG 0.463502 7.3:+1751122 MS.gene050577:CDS
TGGTCATAGCCTCCATTCTC+GGG 0.466277 7.3:-1752022 None:intergenic
TCTCACCAGTCTCCCGAGAA+TGG 0.469905 7.3:+1752010 MS.gene050577:CDS
AGCCTCCATTCTCGGGAGAC+TGG 0.470077 7.3:-1752015 None:intergenic
CGGAGATGCGGTGGTGGTGG+TGG 0.470099 7.3:-1748336 None:intergenic
ATCATAGGTGGTGGTGTTGG+TGG 0.470575 7.3:+1751137 MS.gene050577:CDS
TATGCATTCAATAGGATGTT+GGG 0.475179 7.3:+1750041 MS.gene050577:intron
TTGGTCATAGCCTCCATTCT+CGG 0.475797 7.3:-1752023 None:intergenic
GCAGAAGAAGCCACTGAATG+AGG 0.479604 7.3:-1748404 None:intergenic
CATTACATGATTCAACAACT+TGG 0.485575 7.3:+1751805 MS.gene050577:CDS
ATTCTTGTTGTTATCAAGAG+TGG 0.485874 7.3:-1748537 None:intergenic
GATTTCTTAGAGGTGAAAGA+AGG 0.487496 7.3:-1748581 None:intergenic
CTTGATGTTCATCATTTCCT+CGG 0.490079 7.3:-1751768 None:intergenic
CGTCGGAGATGCGGTGGTGG+TGG 0.495646 7.3:-1748339 None:intergenic
AAATCTCATTCTCTCTCTCT+AGG 0.496213 7.3:+1748599 MS.gene050577:CDS
CTCCTGAAGATGCTGGTTGA+CGG 0.496465 7.3:-1750147 None:intergenic
ATATGCATTATGTCTGCATC+TGG 0.497917 7.3:+1750103 MS.gene050577:CDS
GCTGGCTCGCCAACTGGTGA+TGG 0.498545 7.3:-1751694 None:intergenic
ACCTCCCAGGTCTACAGAGT+GGG 0.499164 7.3:+1751840 MS.gene050577:CDS
AAATGATGAACATCAAGCTA+TGG 0.500826 7.3:+1751774 MS.gene050577:CDS
CTCAGCTTGAACCAGCTAAG+AGG 0.502476 7.3:+1748435 MS.gene050577:CDS
AAGACCACCACTTCGCCCTC+CGG 0.503832 7.3:-1751084 None:intergenic
CTGAATGAGGGTAAAGTATG+TGG 0.508435 7.3:-1748391 None:intergenic
TTCTTGTTGTTATCAAGAGT+GGG 0.509082 7.3:-1748536 None:intergenic
AGGAGGCAACATTATGTATG+AGG 0.516281 7.3:+1750165 MS.gene050577:CDS
GTTGTTGTTGGTGGTTGTGG+TGG 0.524710 7.3:-1748271 None:intergenic
GTATGCTTGTCTAATTCTGA+TGG 0.531450 7.3:+1751110 MS.gene050577:CDS
GTTTGCACGTGACACCTCCC+AGG 0.535717 7.3:+1751827 MS.gene050577:CDS
TCCGGTTTCATTACGGACAT+AGG 0.536430 7.3:-1751066 None:intergenic
GTATGCATTCAATAGGATGT+TGG 0.536594 7.3:+1750040 MS.gene050577:intron
CACTGGACTTCATACCTGAC+AGG 0.545872 7.3:-1751897 None:intergenic
TCATAGGTGGTGGTGTTGGT+GGG 0.546536 7.3:+1751138 MS.gene050577:CDS
CATCCAGATTCAAGACATGC+TGG 0.548607 7.3:+1751868 MS.gene050577:CDS
CAAATCATAGGTGGTGGTGT+TGG 0.550092 7.3:+1751134 MS.gene050577:CDS
GTTCGTCGGAGATGCGGTGG+TGG 0.551568 7.3:-1748342 None:intergenic
TTAGAGGTGAAAGAAGGAGA+AGG 0.553443 7.3:-1748575 None:intergenic
CATACTTTACCCTCATTCAG+TGG 0.553520 7.3:+1748394 MS.gene050577:CDS
ACCGTTCGTCGGAGATGCGG+TGG 0.555343 7.3:-1748345 None:intergenic
CATGCTGGTTATGACCTGTC+AGG 0.555450 7.3:+1751883 MS.gene050577:CDS
CATTGCTGTTGCTGCTGGTG+AGG 0.555993 7.3:+1748854 MS.gene050577:CDS
TCCTCGGATTGGATTCCCGC+TGG 0.565035 7.3:-1751752 None:intergenic
ATTGCAGGAAGAACAGGTCA+TGG 0.575958 7.3:+1751986 MS.gene050577:intron
ACGGAGAGAGGCATTAGAGA+TGG 0.577094 7.3:-1750128 None:intergenic
AATGATGAACATCAAGCTAT+GGG 0.582749 7.3:+1751775 MS.gene050577:CDS
GGAAAAGGTGATCCCTCTGC+TGG 0.584167 7.3:+1751664 MS.gene050577:CDS
AACAAGAAGGACACTAGTGC+TGG 0.587899 7.3:+1751640 MS.gene050577:CDS
TGGAAGAGTCGACTGTTTGG+TGG 0.588873 7.3:-1751732 None:intergenic
GGTGGTGGTTGTGGATACGG+TGG 0.589521 7.3:-1748321 None:intergenic
TAATCCCTACAGGTCATTGT+CGG 0.592613 7.3:+1751601 MS.gene050577:intron
GAACCAGCTAAGAGGAAGAG+AGG 0.597787 7.3:+1748443 MS.gene050577:CDS
TGGAAACCTAAACTTGATGC+TGG 0.602657 7.3:-1751712 None:intergenic
GAAACCGGAGGGCGAAGTGG+TGG 0.603275 7.3:+1751080 MS.gene050577:CDS
CAATTTATGCAACAAAATAG+GGG 0.604932 7.3:+1750076 MS.gene050577:CDS
AAGAAGGACACTAGTGCTGG+TGG 0.607696 7.3:+1751643 MS.gene050577:CDS
CAGAAGAAGCCACTGAATGA+GGG 0.609592 7.3:-1748403 None:intergenic
AGATGCTGGTTGACGGAGAG+AGG 0.610130 7.3:-1750140 None:intergenic
TTTGGTAAAAGACCGTTCGT+CGG 0.610276 7.3:-1748356 None:intergenic
GATGCAGGCAATGCAGGACA+AGG 0.611195 7.3:+1748816 MS.gene050577:intron
AAGACCGTTCGTCGGAGATG+CGG 0.611771 7.3:-1748348 None:intergenic
TTGCAGGAAGAACAGGTCAT+GGG 0.620825 7.3:+1751987 MS.gene050577:intron
AATGAAACCGGAGGGCGAAG+TGG 0.622641 7.3:+1751077 MS.gene050577:CDS
AAACAGTCGACTCTTCCAGC+GGG 0.624900 7.3:+1751737 MS.gene050577:CDS
GATGAACATCAAGCTATGGG+TGG 0.627293 7.3:+1751778 MS.gene050577:CDS
CACCTCCCAGGTCTACAGAG+TGG 0.633953 7.3:+1751839 MS.gene050577:CDS
ATGTTGCCTCCTGAAGATGC+TGG 0.639283 7.3:-1750154 None:intergenic
TGAATGAGGGTAAAGTATGT+GGG 0.641240 7.3:-1748390 None:intergenic
TGATGGCAACTTACCAGCAG+AGG 0.643200 7.3:-1751677 None:intergenic
GGTAAGTTGCCATCACCAGT+TGG 0.643376 7.3:+1751685 MS.gene050577:CDS
ACTGGACCAGCAGCTTTAAG+GGG 0.646372 7.3:-1751161 None:intergenic
GATGGCAACTTACCAGCAGA+GGG 0.646608 7.3:-1751676 None:intergenic
CACCAGTCTCCCGAGAATGG+AGG 0.648200 7.3:+1752013 MS.gene050577:CDS
ACCACCGCATCTCCGACGAA+CGG 0.651866 7.3:+1748344 MS.gene050577:CDS
CCTCCCAGGTCTACAGAGTG+GGG 0.652955 7.3:+1751841 MS.gene050577:CDS
TCTGATGGACAAATCATAGG+TGG 0.664275 7.3:+1751125 MS.gene050577:CDS
TCCAGCGGGAATCCAATCCG+AGG 0.670950 7.3:+1751751 MS.gene050577:CDS
GATGGACAAATCATAGGTGG+TGG 0.676431 7.3:+1751128 MS.gene050577:CDS
ATGTCCGTAATGAAACCGGA+GGG 0.676572 7.3:+1751069 MS.gene050577:CDS
CGTCAACCAGCATCTTCAGG+AGG 0.676685 7.3:+1750148 MS.gene050577:CDS
TATGTCCGTAATGAAACCGG+AGG 0.677990 7.3:+1751068 MS.gene050577:CDS
CTCCCAGGTCTACAGAGTGG+GGG 0.684142 7.3:+1751842 MS.gene050577:CDS
CAAACAGTCGACTCTTCCAG+CGG 0.690163 7.3:+1751736 MS.gene050577:CDS
CCCCACTCTGTAGACCTGGG+AGG 0.709027 7.3:-1751841 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTCAAAGTAATATAAAT+AGG - chr7.3:1750357-1750376 None:intergenic 10.0%
!! AAGAGAAAAATAAAAAAATA+TGG - chr7.3:1750598-1750617 None:intergenic 10.0%
!! TGTTATAAATATAGATATTT+CGG + chr7.3:1751476-1751495 MS.gene050577:intron 10.0%
!! TTATTATTTATTATAAAAGG+AGG + chr7.3:1749211-1749230 MS.gene050577:intron 10.0%
!! TTTAATAATCTTAAACAAAA+TGG - chr7.3:1749025-1749044 None:intergenic 10.0%
!!! AAATTATATTTGTTTTTCAA+TGG - chr7.3:1749423-1749442 None:intergenic 10.0%
!! AAAAATAAAAAAATATGGAC+GGG - chr7.3:1750593-1750612 None:intergenic 15.0%
!! ATTTATCAAAAATAACTTCT+TGG - chr7.3:1751578-1751597 None:intergenic 15.0%
!! GAAAAATAAAAAAATATGGA+CGG - chr7.3:1750594-1750613 None:intergenic 15.0%
!!! AAATTGTTTCTATATTAGAT+TGG + chr7.3:1750834-1750853 MS.gene050577:intron 15.0%
!!! CTTAATTTTATTTAGTTTGA+TGG + chr7.3:1748778-1748797 MS.gene050577:intron 15.0%
!!! GTTGATCTTTTTAATTTTTT+AGG + chr7.3:1750945-1750964 MS.gene050577:intron 15.0%
!!! TTATTGATTATCATAATTCA+AGG + chr7.3:1748739-1748758 MS.gene050577:intron 15.0%
!!! TTTTAACAAACTTAAACAAA+CGG + chr7.3:1749368-1749387 MS.gene050577:intron 15.0%
!! AAAATAAAAAAATATGGACG+GGG - chr7.3:1750592-1750611 None:intergenic 20.0%
!! AGAAATATTCTTATAAGAAG+TGG - chr7.3:1750779-1750798 None:intergenic 20.0%
!! GAAATATTCTTATAAGAAGT+GGG - chr7.3:1750778-1750797 None:intergenic 20.0%
!! TAAAATGTAAAGATAAACCT+TGG - chr7.3:1750453-1750472 None:intergenic 20.0%
!! TTGGAGAAATAATCAATTAT+TGG + chr7.3:1749461-1749480 MS.gene050577:intron 20.0%
!! TTTAACAAACTTAAACAAAC+GGG + chr7.3:1749369-1749388 MS.gene050577:intron 20.0%
!!! AATTTTTTAGGTGTATGATT+TGG + chr7.3:1750957-1750976 MS.gene050577:intron 20.0%
!!! TTTATTTAGTTTGATGGTTA+TGG + chr7.3:1748784-1748803 MS.gene050577:intron 20.0%
!!! TTTTTAAGATGCTAATTTCT+TGG + chr7.3:1749634-1749653 MS.gene050577:intron 20.0%
! AAACAATCTTCAAAAGGAAA+CGG + chr7.3:1750265-1750284 MS.gene050577:intron 25.0%
! ATTAAGATCCTAAAACATCT+TGG - chr7.3:1749901-1749920 None:intergenic 25.0%
! ATTGCTCAAGTTAATGTATT+TGG + chr7.3:1748992-1749011 MS.gene050577:intron 25.0%
! ATTTCTCCAAATCTAATCAA+GGG - chr7.3:1749451-1749470 None:intergenic 25.0%
! CAATTTATGCAACAAAATAG+GGG + chr7.3:1750076-1750095 MS.gene050577:CDS 25.0%
! CTCTTAATCATGAATTGATT+TGG + chr7.3:1748665-1748684 MS.gene050577:intron 25.0%
! GAAAAAGATGAAAACCAAAT+TGG - chr7.3:1749992-1750011 None:intergenic 25.0%
! GATTCTTTCTCTAATTTCTA+GGG + chr7.3:1748625-1748644 MS.gene050577:intron 25.0%
! GCAATTTATGCAACAAAATA+GGG + chr7.3:1750075-1750094 MS.gene050577:CDS 25.0%
! TATTTCTCCAAATCTAATCA+AGG - chr7.3:1749452-1749471 None:intergenic 25.0%
! TATTTGAGTATGCATTCAAT+AGG + chr7.3:1750033-1750052 MS.gene050577:intron 25.0%
! TATTTGTGTTAAAGAAACCA+AGG + chr7.3:1750433-1750452 MS.gene050577:intron 25.0%
! TCTTTAATGCTTTGATATCA+GGG + chr7.3:1751014-1751033 MS.gene050577:intron 25.0%
! TGAAAACCAAATTGGATAAA+TGG - chr7.3:1749984-1750003 None:intergenic 25.0%
! TGAAGATTGTTTGAAGAATA+GGG - chr7.3:1750257-1750276 None:intergenic 25.0%
! TGATTCTTTCTCTAATTTCT+AGG + chr7.3:1748624-1748643 MS.gene050577:intron 25.0%
! TGCAATTTATGCAACAAAAT+AGG + chr7.3:1750074-1750093 MS.gene050577:CDS 25.0%
! TGTGAATGTAATTCATTATC+AGG - chr7.3:1751555-1751574 None:intergenic 25.0%
! TTAATAAAAACACTGTACTG+CGG + chr7.3:1750913-1750932 MS.gene050577:intron 25.0%
! TTATACCATAAGAAAATCAG+TGG - chr7.3:1751941-1751960 None:intergenic 25.0%
! TTCTTCAAACAATCTTCAAA+AGG + chr7.3:1750259-1750278 MS.gene050577:intron 25.0%
! TTCTTTAATGCTTTGATATC+AGG + chr7.3:1751013-1751032 MS.gene050577:intron 25.0%
! TTGAAGATTGTTTGAAGAAT+AGG - chr7.3:1750258-1750277 None:intergenic 25.0%
! TTGCTCAAGTTAATGTATTT+GGG + chr7.3:1748993-1749012 MS.gene050577:intron 25.0%
! TTTAAGCAAAATATGCTTGT+AGG + chr7.3:1749830-1749849 MS.gene050577:intron 25.0%
!! AAGTTAATGTATTTGGGTTT+GGG + chr7.3:1748999-1749018 MS.gene050577:intron 25.0%
!! AGACAATAGCATTTTTCATA+TGG + chr7.3:1749602-1749621 MS.gene050577:intron 25.0%
!! ATCCAAGAATAATGCTTTTA+GGG + chr7.3:1749713-1749732 MS.gene050577:intron 25.0%
!! CTAACCAAAAAAACTTTTTG+TGG + chr7.3:1750706-1750725 MS.gene050577:intron 25.0%
!! TTATCTTTACATTTTACCCA+TGG + chr7.3:1750457-1750476 MS.gene050577:intron 25.0%
!!! AAAGCTATTTTGATTAGCTT+TGG - chr7.3:1749265-1749284 None:intergenic 25.0%
!!! ATTTTTTATGGACAACAAGA+AGG + chr7.3:1751627-1751646 MS.gene050577:CDS 25.0%
!!! TTGACCACAAAAAGTTTTTT+TGG - chr7.3:1750713-1750732 None:intergenic 25.0%
AAATCAACTTCTGCCAAAAA+AGG + chr7.3:1751366-1751385 MS.gene050577:intron 30.0%
AAATGATGAACATCAAGCTA+TGG + chr7.3:1751774-1751793 MS.gene050577:CDS 30.0%
AATCAACTTCTGCCAAAAAA+GGG + chr7.3:1751367-1751386 MS.gene050577:intron 30.0%
AATGATGAACATCAAGCTAT+GGG + chr7.3:1751775-1751794 MS.gene050577:CDS 30.0%
ACAGAAACTACAAAAGAAAC+AGG - chr7.3:1751297-1751316 None:intergenic 30.0%
ATAAATAGGAATATGAGCCT+TGG - chr7.3:1750343-1750362 None:intergenic 30.0%
CAAGTTGTTGAATCATGTAA+TGG - chr7.3:1751807-1751826 None:intergenic 30.0%
CATTACATGATTCAACAACT+TGG + chr7.3:1751805-1751824 MS.gene050577:CDS 30.0%
GAATGTAATTCATTATCAGG+TGG - chr7.3:1751552-1751571 None:intergenic 30.0%
GATAAATAGTTAATCCCTAC+AGG + chr7.3:1751591-1751610 MS.gene050577:intron 30.0%
GGATATACGTAGTAAATAAG+AGG - chr7.3:1749489-1749508 None:intergenic 30.0%
TAACTATGTAGTGAAATCAG+TGG + chr7.3:1751420-1751439 MS.gene050577:intron 30.0%
TAGCATATTCAATCAACATG+TGG - chr7.3:1750508-1750527 None:intergenic 30.0%
TATGCATTCAATAGGATGTT+GGG + chr7.3:1750041-1750060 MS.gene050577:intron 30.0%
TTTACCTTGTGAATATTGAG+CGG + chr7.3:1751254-1751273 MS.gene050577:intron 30.0%
TTTCTTCCCTTGATTAGATT+TGG + chr7.3:1749442-1749461 MS.gene050577:intron 30.0%
TTTGATATCATTTCGCTTAC+TGG + chr7.3:1751041-1751060 MS.gene050577:CDS 30.0%
! AAACTTTTTGTGGTCAAATC+TGG + chr7.3:1750716-1750735 MS.gene050577:intron 30.0%
! AATTCTGATGGACAAATCAT+AGG + chr7.3:1751122-1751141 MS.gene050577:CDS 30.0%
! AGAATATTTCTACCTTCAAG+AGG + chr7.3:1750788-1750807 MS.gene050577:intron 30.0%
! AGTTTGATGGTTATGGTAAT+GGG + chr7.3:1748791-1748810 MS.gene050577:intron 30.0%
! CAAGTTAATGTATTTGGGTT+TGG + chr7.3:1748998-1749017 MS.gene050577:intron 30.0%
! CCTTAGTGAAAATAAGTTGA+TGG + chr7.3:1749667-1749686 MS.gene050577:intron 30.0%
! GATCCAAGAATAATGCTTTT+AGG + chr7.3:1749712-1749731 MS.gene050577:intron 30.0%
! TAGTTTGATGGTTATGGTAA+TGG + chr7.3:1748790-1748809 MS.gene050577:intron 30.0%
! TCCAAGAATAATGCTTTTAG+GGG + chr7.3:1749714-1749733 MS.gene050577:intron 30.0%
! TGTTTGCCATTTATCCAATT+TGG + chr7.3:1749975-1749994 MS.gene050577:intron 30.0%
! TTTCTGTTATAGCCTTTTTC+TGG + chr7.3:1751310-1751329 MS.gene050577:intron 30.0%
!! ATTCTTGTTGTTATCAAGAG+TGG - chr7.3:1748540-1748559 None:intergenic 30.0%
!! CCATCAACTTATTTTCACTA+AGG - chr7.3:1749670-1749689 None:intergenic 30.0%
!! TTCTTGTTGTTATCAAGAGT+GGG - chr7.3:1748539-1748558 None:intergenic 30.0%
!!! CATTGTCGGTACATTTTTTA+TGG + chr7.3:1751615-1751634 MS.gene050577:CDS 30.0%
!!! TTTTTGAGTGATGCTGTTAT+AGG - chr7.3:1749776-1749795 None:intergenic 30.0%
!!! TTTTTTGTTCTGCCAGAAAA+AGG - chr7.3:1751325-1751344 None:intergenic 30.0%
AAATCAGTGGAATGAAAAGC+AGG + chr7.3:1751433-1751452 MS.gene050577:intron 35.0%
AAATCTCATTCTCTCTCTCT+AGG + chr7.3:1748599-1748618 MS.gene050577:CDS 35.0%
AATCAGTGGAATGAAAAGCA+GGG + chr7.3:1751434-1751453 MS.gene050577:intron 35.0%
AGAGCTTAATTGGTTGTCAT+TGG - chr7.3:1748243-1748262 None:intergenic 35.0%
AGAGGTAGACCTAGAAAATA+TGG + chr7.3:1748461-1748480 MS.gene050577:CDS 35.0%
ATAAGAAAATCAGTGGAGGA+TGG - chr7.3:1751934-1751953 None:intergenic 35.0%
ATATGCATTATGTCTGCATC+TGG + chr7.3:1750103-1750122 MS.gene050577:CDS 35.0%
ATCAACTTCTGCCAAAAAAG+GGG + chr7.3:1751368-1751387 MS.gene050577:intron 35.0%
CAGTGGTAATAATGGCTTAT+GGG + chr7.3:1750878-1750897 MS.gene050577:intron 35.0%
CTGCAAATGAATTTGTAGGT+TGG + chr7.3:1751204-1751223 MS.gene050577:intron 35.0%
CTTGATGTTCATCATTTCCT+CGG - chr7.3:1751771-1751790 None:intergenic 35.0%
GAGAGAATGAGATTTCTTAG+AGG - chr7.3:1748594-1748613 None:intergenic 35.0%
GATTTCTTAGAGGTGAAAGA+AGG - chr7.3:1748584-1748603 None:intergenic 35.0%
GCTATTGTCTCAATGAGAAA+TGG - chr7.3:1749592-1749611 None:intergenic 35.0%
GGAACTGCAAATGAATTTGT+AGG + chr7.3:1751200-1751219 MS.gene050577:intron 35.0%
GTAAAACAAATGCAAGACAG+CGG - chr7.3:1751239-1751258 None:intergenic 35.0%
GTATGCATTCAATAGGATGT+TGG + chr7.3:1750040-1750059 MS.gene050577:intron 35.0%
GTATGCTTGTCTAATTCTGA+TGG + chr7.3:1751110-1751129 MS.gene050577:CDS 35.0%
GTTGAGTGTTATCATAACCA+AGG + chr7.3:1750323-1750342 MS.gene050577:intron 35.0%
TAATGCTTTGATATCAGGGT+CGG + chr7.3:1751018-1751037 MS.gene050577:intron 35.0%
TACCATAAGAAAATCAGTGG+AGG - chr7.3:1751938-1751957 None:intergenic 35.0%
TGAATGAGGGTAAAGTATGT+GGG - chr7.3:1748393-1748412 None:intergenic 35.0%
TTTGGAAGAAAACCCATAGA+GGG - chr7.3:1749247-1749266 None:intergenic 35.0%
! GTTTGATGGTTATGGTAATG+GGG + chr7.3:1748792-1748811 MS.gene050577:intron 35.0%
! TGTGAATTTTCCTGCATCAA+CGG + chr7.3:1749937-1749956 MS.gene050577:intron 35.0%
! TTTTCTCTTGTCGTAGAATC+AGG + chr7.3:1750396-1750415 MS.gene050577:intron 35.0%
!! TCCCCTAAAAGCATTATTCT+TGG - chr7.3:1749718-1749737 None:intergenic 35.0%
!!! AGAAGCTTTTTTAGCAGCTA+GGG - chr7.3:1748501-1748520 None:intergenic 35.0%
!!! AGGTTTTGAATTTCCCTCTA+TGG + chr7.3:1749231-1749250 MS.gene050577:intron 35.0%
!!! ATCCTCCACTGATTTTCTTA+TGG + chr7.3:1751933-1751952 MS.gene050577:intron 35.0%
!!! GGTTTTGAATTTCCCTCTAT+GGG + chr7.3:1749232-1749251 MS.gene050577:intron 35.0%
!!! TAGAAGCTTTTTTAGCAGCT+AGG - chr7.3:1748502-1748521 None:intergenic 35.0%
!!! TCAGGAGTACCATATTTTCT+AGG - chr7.3:1748473-1748492 None:intergenic 35.0%
AAAAAAGGGGGAAATGAGGT+GGG + chr7.3:1751381-1751400 MS.gene050577:intron 40.0%
AATAAGTGCCAAAACAACCG+TGG - chr7.3:1749519-1749538 None:intergenic 40.0%
AGAACCGCTCAATATTCACA+AGG - chr7.3:1751261-1751280 None:intergenic 40.0%
AGATCCTAAAACATCTTGGC+TGG - chr7.3:1749897-1749916 None:intergenic 40.0%
AGCGAAGTTCTCAATATTGC+AGG + chr7.3:1751971-1751990 MS.gene050577:intron 40.0%
AGGAGGCAACATTATGTATG+AGG + chr7.3:1750165-1750184 MS.gene050577:CDS 40.0%
ATTCATTATCAGGTGGTGCT+TGG - chr7.3:1751545-1751564 None:intergenic 40.0%
CATACTTTACCCTCATTCAG+TGG + chr7.3:1748394-1748413 MS.gene050577:CDS 40.0%
CCAGTTCAGGTAATCTTAGA+AGG + chr7.3:1751179-1751198 MS.gene050577:intron 40.0%
CTCAATATTGCAGGAAGAAC+AGG + chr7.3:1751980-1751999 MS.gene050577:intron 40.0%
CTGAATGAGGGTAAAGTATG+TGG - chr7.3:1748394-1748413 None:intergenic 40.0%
CTGTTGAAACTTGCAGCATA+TGG + chr7.3:1750290-1750309 MS.gene050577:intron 40.0%
GCAGTGGTAATAATGGCTTA+TGG + chr7.3:1750877-1750896 MS.gene050577:intron 40.0%
GGATGGTATACCAAAATCAC+TGG - chr7.3:1751917-1751936 None:intergenic 40.0%
GGTGGAAGAAAGAGCTTAAT+TGG - chr7.3:1748253-1748272 None:intergenic 40.0%
TAACCAGCATGTCTTGAATC+TGG - chr7.3:1751874-1751893 None:intergenic 40.0%
TAATCCCTACAGGTCATTGT+CGG + chr7.3:1751601-1751620 MS.gene050577:intron 40.0%
TACCCATGGTGTTCCAAAAA+AGG + chr7.3:1750471-1750490 MS.gene050577:intron 40.0%
TCAAATCTGGATGTGGATGT+TGG + chr7.3:1750729-1750748 MS.gene050577:intron 40.0%
TCAACTTCTGCCAAAAAAGG+GGG + chr7.3:1751369-1751388 MS.gene050577:intron 40.0%
TCCTATGTCCGTAATGAAAC+CGG + chr7.3:1751065-1751084 MS.gene050577:CDS 40.0%
TGAGAAATGGCTGAGCATAT+CGG - chr7.3:1749579-1749598 None:intergenic 40.0%
TGGAAACCTAAACTTGATGC+TGG - chr7.3:1751715-1751734 None:intergenic 40.0%
TGGCGAACTTAAAGGAGAAA+GGG - chr7.3:1749874-1749893 None:intergenic 40.0%
TGTTCATCATTTCCTCGGAT+TGG - chr7.3:1751766-1751785 None:intergenic 40.0%
TTAATGTTAGTGCGTAGCAG+TGG + chr7.3:1750861-1750880 MS.gene050577:intron 40.0%
TTAGAGGTGAAAGAAGGAGA+AGG - chr7.3:1748578-1748597 None:intergenic 40.0%
TTAGTCCTAGACGAGATATC+AGG + chr7.3:1749537-1749556 MS.gene050577:intron 40.0%
TTTGGTAAAAGACCGTTCGT+CGG - chr7.3:1748359-1748378 None:intergenic 40.0%
TTTGTGGTCAAATCTGGATG+TGG + chr7.3:1750722-1750741 MS.gene050577:intron 40.0%
! CTTTGGAAGAAAACCCATAG+AGG - chr7.3:1749248-1749267 None:intergenic 40.0%
! GAACGGTCTTTTACCAAACA+CGG + chr7.3:1748361-1748380 MS.gene050577:CDS 40.0%
! GGTATGAAGTCCAGTGATTT+TGG + chr7.3:1751904-1751923 MS.gene050577:intron 40.0%
! GTCTTTTACCAAACACGGAT+GGG + chr7.3:1748366-1748385 MS.gene050577:CDS 40.0%
! TCTGATGGACAAATCATAGG+TGG + chr7.3:1751125-1751144 MS.gene050577:CDS 40.0%
! TTTTGAATTTCTGCACCACC+TGG + chr7.3:1748923-1748942 MS.gene050577:intron 40.0%
!! CAATGGATTGTCAGTGTGTT+TGG - chr7.3:1749406-1749425 None:intergenic 40.0%
!! CCTTCTAAGATTACCTGAAC+TGG - chr7.3:1751182-1751201 None:intergenic 40.0%
!!! TGCCTTTTTTGGAACACCAT+GGG - chr7.3:1750476-1750495 None:intergenic 40.0%
AACAAGAAGGACACTAGTGC+TGG + chr7.3:1751640-1751659 MS.gene050577:CDS 45.0%
AATCTGGATGTGGATGTTGG+AGG + chr7.3:1750732-1750751 MS.gene050577:intron 45.0%
ACGTATATCCTTAGCCACCA+CGG + chr7.3:1749499-1749518 MS.gene050577:intron 45.0%
AGACGAGATATCAGGTTTGG+AGG + chr7.3:1749545-1749564 MS.gene050577:intron 45.0%
ATGTCCGTAATGAAACCGGA+GGG + chr7.3:1751069-1751088 MS.gene050577:CDS 45.0%
ATTATCAGGTGGTGCTTGGT+AGG - chr7.3:1751541-1751560 None:intergenic 45.0%
ATTGCAGGAAGAACAGGTCA+TGG + chr7.3:1751986-1752005 MS.gene050577:intron 45.0%
CAAAAAAGGGGGAAATGAGG+TGG + chr7.3:1751380-1751399 MS.gene050577:intron 45.0%
CAGAAGAAGCCACTGAATGA+GGG - chr7.3:1748406-1748425 None:intergenic 45.0%
CATCCAGATTCAAGACATGC+TGG + chr7.3:1751868-1751887 MS.gene050577:CDS 45.0%
CCAAACCTGATATCTCGTCT+AGG - chr7.3:1749545-1749564 None:intergenic 45.0%
CCTAGACGAGATATCAGGTT+TGG + chr7.3:1749542-1749561 MS.gene050577:intron 45.0%
CTACCTTCAAGAGGACAGAT+AGG + chr7.3:1750797-1750816 MS.gene050577:intron 45.0%
GATGAACATCAAGCTATGGG+TGG + chr7.3:1751778-1751797 MS.gene050577:CDS 45.0%
GATGGACAAATCATAGGTGG+TGG + chr7.3:1751128-1751147 MS.gene050577:CDS 45.0%
GTGCGTAGCAGTGGTAATAA+TGG + chr7.3:1750870-1750889 MS.gene050577:intron 45.0%
GTGGCGAACTTAAAGGAGAA+AGG - chr7.3:1749875-1749894 None:intergenic 45.0%
TAGTCAAACACCGTTGATGC+AGG - chr7.3:1749950-1749969 None:intergenic 45.0%
TATGTCCGTAATGAAACCGG+AGG + chr7.3:1751068-1751087 MS.gene050577:CDS 45.0%
TCCGGTTTCATTACGGACAT+AGG - chr7.3:1751069-1751088 None:intergenic 45.0%
TCCTAAAACATCTTGGCTGG+TGG - chr7.3:1749894-1749913 None:intergenic 45.0%
TGCCAAAAAAGGGGGAAATG+AGG + chr7.3:1751377-1751396 MS.gene050577:intron 45.0%
TTGCAGGAAGAACAGGTCAT+GGG + chr7.3:1751987-1752006 MS.gene050577:intron 45.0%
TTGGTCATAGCCTCCATTCT+CGG - chr7.3:1752026-1752045 None:intergenic 45.0%
! AACTGGACCAGCAGCTTTAA+GGG - chr7.3:1751165-1751184 None:intergenic 45.0%
! ATGTACCGACAATGACCTGT+AGG - chr7.3:1751609-1751628 None:intergenic 45.0%
! CAAATCATAGGTGGTGGTGT+TGG + chr7.3:1751134-1751153 MS.gene050577:CDS 45.0%
! GGTCTTTTACCAAACACGGA+TGG + chr7.3:1748365-1748384 MS.gene050577:CDS 45.0%
! TGTACCGACAATGACCTGTA+GGG - chr7.3:1751608-1751627 None:intergenic 45.0%
!! GTTGCTGGTGTTGTTGTTGT+TGG - chr7.3:1748286-1748305 None:intergenic 45.0%
!! GTTGTTGTTGTTGGTGGTTG+TGG - chr7.3:1748277-1748296 None:intergenic 45.0%
!! TTATGGTAATGGGGTGATGC+AGG + chr7.3:1748801-1748820 MS.gene050577:intron 45.0%
!!! CACCTCATTTCCCCCTTTTT+TGG - chr7.3:1751382-1751401 None:intergenic 45.0%
!!! GGATGCACAAGTGCCTTTTT+TGG - chr7.3:1750487-1750506 None:intergenic 45.0%
!!! GTGCCTTTTTTGGAACACCA+TGG - chr7.3:1750477-1750496 None:intergenic 45.0%
!!! TGGAGTTTTGTTGCTGTTGC+TGG - chr7.3:1748301-1748320 None:intergenic 45.0%
!! TGTTTATTATTTATTATAAA+AGG + chr7.3:1749208-1749227 MS.gene050577:intron 5.0%
!!! TTTTTTTTTTTTTTTTTTGA+GGG + chr7.3:1749072-1749091 MS.gene050577:intron 5.0%
!!! TTTTTTTTTTTTTTTTTTTG+AGG + chr7.3:1749071-1749090 MS.gene050577:intron 5.0%
AAGTGCCAAAACAACCGTGG+TGG - chr7.3:1749516-1749535 None:intergenic 50.0%
ACCTGGTAAGTACAGTGACG+CGG + chr7.3:1748940-1748959 MS.gene050577:intron 50.0%
ATGTTGCCTCCTGAAGATGC+TGG - chr7.3:1750157-1750176 None:intergenic 50.0%
CAAAACAACCGTGGTGGCTA+AGG - chr7.3:1749510-1749529 None:intergenic 50.0%
CACTGGACTTCATACCTGAC+AGG - chr7.3:1751900-1751919 None:intergenic 50.0%
CGTCCTATCTGTCCTCTTGA+AGG - chr7.3:1750803-1750822 None:intergenic 50.0%
CTACCTCTCTTCCTCTTAGC+TGG - chr7.3:1748449-1748468 None:intergenic 50.0%
CTCAGCTTGAACCAGCTAAG+AGG + chr7.3:1748435-1748454 MS.gene050577:CDS 50.0%
GAACCAGCTAAGAGGAAGAG+AGG + chr7.3:1748443-1748462 MS.gene050577:CDS 50.0%
GAACTGGACCAGCAGCTTTA+AGG - chr7.3:1751166-1751185 None:intergenic 50.0%
GATGGCAACTTACCAGCAGA+GGG - chr7.3:1751679-1751698 None:intergenic 50.0%
GCAGAAGAAGCCACTGAATG+AGG - chr7.3:1748407-1748426 None:intergenic 50.0%
GGGGACACTCTAGTAACATC+TGG + chr7.3:1749733-1749752 MS.gene050577:intron 50.0%
GGTAAGTTGCCATCACCAGT+TGG + chr7.3:1751685-1751704 MS.gene050577:CDS 50.0%
TAAAGCTGCTGGTCCAGTTC+AGG + chr7.3:1751166-1751185 MS.gene050577:CDS 50.0%
TAGGTGTGAAAGCAGGAAGG+TGG - chr7.3:1751522-1751541 None:intergenic 50.0%
TGATGGCAACTTACCAGCAG+AGG - chr7.3:1751680-1751699 None:intergenic 50.0%
TGCACGCATCTGTGTGCTTA+TGG + chr7.3:1750653-1750672 MS.gene050577:intron 50.0%
TGCTTGGTAGGTGTGAAAGC+AGG - chr7.3:1751529-1751548 None:intergenic 50.0%
TGGAAGAGTCGACTGTTTGG+TGG - chr7.3:1751735-1751754 None:intergenic 50.0%
TGGTAGGTGTGAAAGCAGGA+AGG - chr7.3:1751525-1751544 None:intergenic 50.0%
TGGTCATAGCCTCCATTCTC+GGG - chr7.3:1752025-1752044 None:intergenic 50.0%
TTCGCCCTCCGGTTTCATTA+CGG - chr7.3:1751076-1751095 None:intergenic 50.0%
! AAACAGTCGACTCTTCCAGC+GGG + chr7.3:1751737-1751756 MS.gene050577:CDS 50.0%
! AAGAAGGACACTAGTGCTGG+TGG + chr7.3:1751643-1751662 MS.gene050577:CDS 50.0%
! ATCATAGGTGGTGGTGTTGG+TGG + chr7.3:1751137-1751156 MS.gene050577:CDS 50.0%
! CAAACAGTCGACTCTTCCAG+CGG + chr7.3:1751736-1751755 MS.gene050577:CDS 50.0%
! CATGCTGGTTATGACCTGTC+AGG + chr7.3:1751883-1751902 MS.gene050577:CDS 50.0%
! CATGTCATTGCTGTTGCTGC+TGG + chr7.3:1748849-1748868 MS.gene050577:CDS 50.0%
! CTCCTGAAGATGCTGGTTGA+CGG - chr7.3:1750150-1750169 None:intergenic 50.0%
! CTTAGCCACCACGGTTGTTT+TGG + chr7.3:1749508-1749527 MS.gene050577:intron 50.0%
! GCCACCAGCCAAGATGTTTT+AGG + chr7.3:1749890-1749909 MS.gene050577:intron 50.0%
! TTAGCAGCTAGGGCTTGTTC+AGG - chr7.3:1748491-1748510 None:intergenic 50.0%
! TTGGCTGGTGGCGAACTTAA+AGG - chr7.3:1749882-1749901 None:intergenic 50.0%
!! ACGGAGAGAGGCATTAGAGA+TGG - chr7.3:1750131-1750150 None:intergenic 50.0%
!! ACTGGACCAGCAGCTTTAAG+GGG - chr7.3:1751164-1751183 None:intergenic 50.0%
!! GACACTAGTGCTGGTGGAAA+AGG + chr7.3:1751649-1751668 MS.gene050577:CDS 50.0%
!! GCTGGTGTTGTTGTTGTTGG+TGG - chr7.3:1748283-1748302 None:intergenic 50.0%
!! GTTGTTGTTGGTGGTTGTGG+TGG - chr7.3:1748274-1748293 None:intergenic 50.0%
!! TCATAGGTGGTGGTGTTGGT+GGG + chr7.3:1751138-1751157 MS.gene050577:CDS 50.0%
AAGACCGTTCGTCGGAGATG+CGG - chr7.3:1748351-1748370 None:intergenic 55.0%
AATGAAACCGGAGGGCGAAG+TGG + chr7.3:1751077-1751096 MS.gene050577:CDS 55.0%
ACCTCCCAGGTCTACAGAGT+GGG + chr7.3:1751840-1751859 MS.gene050577:CDS 55.0%
ATGTGGGACCCATCCGTGTT+TGG - chr7.3:1748377-1748396 None:intergenic 55.0%
CCTGGTAAGTACAGTGACGC+GGG + chr7.3:1748941-1748960 MS.gene050577:intron 55.0%
CGCTGGAAGAGTCGACTGTT+TGG - chr7.3:1751738-1751757 None:intergenic 55.0%
CGTCAACCAGCATCTTCAGG+AGG + chr7.3:1750148-1750167 MS.gene050577:CDS 55.0%
CTCCGTCAACCAGCATCTTC+AGG + chr7.3:1750145-1750164 MS.gene050577:CDS 55.0%
GATGCAGGCAATGCAGGACA+AGG + chr7.3:1748816-1748835 MS.gene050577:intron 55.0%
GCGTCACTGTACTTACCAGG+TGG - chr7.3:1748941-1748960 None:intergenic 55.0%
GGAAAAGGTGATCCCTCTGC+TGG + chr7.3:1751664-1751683 MS.gene050577:CDS 55.0%
GGCGAGCCAGCATCAAGTTT+AGG + chr7.3:1751706-1751725 MS.gene050577:CDS 55.0%
TCTCACCAGTCTCCCGAGAA+TGG + chr7.3:1752010-1752029 MS.gene050577:CDS 55.0%
! AGATGCTGGTTGACGGAGAG+AGG - chr7.3:1750143-1750162 None:intergenic 55.0%
! CATTGCTGTTGCTGCTGGTG+AGG + chr7.3:1748854-1748873 MS.gene050577:CDS 55.0%
!! GGTGGTGGTGGTTGTGGATA+CGG - chr7.3:1748327-1748346 None:intergenic 55.0%
!! GTTGTTGGTGGTTGTGGTGG+TGG - chr7.3:1748271-1748290 None:intergenic 55.0%
AAGACCACCACTTCGCCCTC+CGG - chr7.3:1751087-1751106 None:intergenic 60.0%
ACCACCGCATCTCCGACGAA+CGG + chr7.3:1748344-1748363 MS.gene050577:CDS 60.0%
ACTCCCCCACTCTGTAGACC+TGG - chr7.3:1751848-1751867 None:intergenic 60.0%
AGCCTCCATTCTCGGGAGAC+TGG - chr7.3:1752018-1752037 None:intergenic 60.0%
CACCAGTCTCCCGAGAATGG+AGG + chr7.3:1752013-1752032 MS.gene050577:CDS 60.0%
CACCTCCCAGGTCTACAGAG+TGG + chr7.3:1751839-1751858 MS.gene050577:CDS 60.0%
CCCGCGTCACTGTACTTACC+AGG - chr7.3:1748944-1748963 None:intergenic 60.0%
CCTCCCAGGTCTACAGAGTG+GGG + chr7.3:1751841-1751860 MS.gene050577:CDS 60.0%
CTCCCAGGTCTACAGAGTGG+GGG + chr7.3:1751842-1751861 MS.gene050577:CDS 60.0%
CTCCCCCACTCTGTAGACCT+GGG - chr7.3:1751847-1751866 None:intergenic 60.0%
GGTGGTTGTGGATACGGTGG+TGG - chr7.3:1748321-1748340 None:intergenic 60.0%
GTTTGCACGTGACACCTCCC+AGG + chr7.3:1751827-1751846 MS.gene050577:CDS 60.0%
TCCAGCGGGAATCCAATCCG+AGG + chr7.3:1751751-1751770 MS.gene050577:CDS 60.0%
TGGGGTGATGCAGGCAATGC+AGG + chr7.3:1748810-1748829 MS.gene050577:intron 60.0%
! GGTGGTGGTTGTGGATACGG+TGG - chr7.3:1748324-1748343 None:intergenic 60.0%
! TCCTCGGATTGGATTCCCGC+TGG - chr7.3:1751755-1751774 None:intergenic 60.0%
!! CTTGATGCTGGCTCGCCAAC+TGG - chr7.3:1751703-1751722 None:intergenic 60.0%
ACCGTTCGTCGGAGATGCGG+TGG - chr7.3:1748348-1748367 None:intergenic 65.0%
CCCCACTCTGTAGACCTGGG+AGG - chr7.3:1751844-1751863 None:intergenic 65.0%
GAAACCGGAGGGCGAAGTGG+TGG + chr7.3:1751080-1751099 MS.gene050577:CDS 65.0%
GGTGGGCCCCTTAAAGCTGC+TGG + chr7.3:1751155-1751174 MS.gene050577:CDS 65.0%
GTTCGTCGGAGATGCGGTGG+TGG - chr7.3:1748345-1748364 None:intergenic 65.0%
!! GCTGGCTCGCCAACTGGTGA+TGG - chr7.3:1751697-1751716 None:intergenic 65.0%
!! TGCGGTGGTGGTGGTGGTTG+TGG - chr7.3:1748333-1748352 None:intergenic 65.0%
! CGTCGGAGATGCGGTGGTGG+TGG - chr7.3:1748342-1748361 None:intergenic 70.0%
!! CGGAGATGCGGTGGTGGTGG+TGG - chr7.3:1748339-1748358 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 1748233 1752057 1748233 ID=MS.gene050577
chr7.3 mRNA 1748233 1752057 1748233 ID=MS.gene050577.t1;Parent=MS.gene050577
chr7.3 exon 1748233 1748620 1748233 ID=MS.gene050577.t1.exon1;Parent=MS.gene050577.t1
chr7.3 CDS 1748233 1748620 1748233 ID=cds.MS.gene050577.t1;Parent=MS.gene050577.t1
chr7.3 exon 1748823 1748875 1748823 ID=MS.gene050577.t1.exon2;Parent=MS.gene050577.t1
chr7.3 CDS 1748823 1748875 1748823 ID=cds.MS.gene050577.t1;Parent=MS.gene050577.t1
chr7.3 exon 1750055 1750186 1750055 ID=MS.gene050577.t1.exon3;Parent=MS.gene050577.t1
chr7.3 CDS 1750055 1750186 1750055 ID=cds.MS.gene050577.t1;Parent=MS.gene050577.t1
chr7.3 exon 1751035 1751187 1751035 ID=MS.gene050577.t1.exon4;Parent=MS.gene050577.t1
chr7.3 CDS 1751035 1751187 1751035 ID=cds.MS.gene050577.t1;Parent=MS.gene050577.t1
chr7.3 exon 1751613 1751904 1751613 ID=MS.gene050577.t1.exon5;Parent=MS.gene050577.t1
chr7.3 CDS 1751613 1751904 1751613 ID=cds.MS.gene050577.t1;Parent=MS.gene050577.t1
chr7.3 exon 1751993 1752057 1751993 ID=MS.gene050577.t1.exon6;Parent=MS.gene050577.t1
chr7.3 CDS 1751993 1752057 1751993 ID=cds.MS.gene050577.t1;Parent=MS.gene050577.t1
Gene Sequence

>MS.gene050577

ATGGACTCCAATGACAACCAATTAAGCTCTTTCTTCCACCACCACAACCACCAACAACAACAACACCAGCAACAGCAACAAAACTCCACCACCGTATCCACAACCACCACCACCACCGCATCTCCGACGAACGGTCTTTTACCAAACACGGATGGGTCCCACATACTTTACCCTCATTCAGTGGCTTCTTCTGCTGTTTCTTCTCAGCTTGAACCAGCTAAGAGGAAGAGAGGTAGACCTAGAAAATATGGTACTCCTGAACAAGCCCTAGCTGCTAAAAAAGCTTCTACGTCGTCGTTTTCTCCCACTCTTGATAACAACAAGAATACTCACTCTTTCTCTCCTTCTCCTTCTTTCACCTCTAAGAAATCTCATTCTCTCTCTCTAGGTTTGATTCTTTCTCTAATTTCTAGGGTTTCTTTTTTTGTGCTTCTCTTAATCATGAATTGATTTGGCGCTTTTTTGTTATGTTATGAATTTTGTTGATTTATGCTTTTGAAACTATTTTATTGATTATCATAATTCAAGGTATCAACTATTAAGTGCTTAATTTTATTTAGTTTGATGGTTATGGTAATGGGGTGATGCAGGCAATGCAGGACAAGGTTTCAGTGCACATGTCATTGCTGTTGCTGCTGGTGAGGTATGCTTTATTATTATTATTCACTCACTTTCAATATTGATTCTTCATTTTGAATTTCTGCACCACCTGGTAAGTACAGTGACGCGGGTTCACATTCAGACTCAATTAGAGTCTTGATTGCTCAAGTTAATGTATTTGGGTTTGGGCCATTTTGTTTAAGATTATTAAAAAAAAAAAGTCATTTTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGGGAAAAAGTCATTTTAGTTATGTTTGTGTGAAGTTTCTTTTTCAATTCGTTTTGATATAAATAATTTAGAGTATTTTTTATAGAGATCTTTAAGAAAAGTATCTTATTTTGTGCTTGTTTATTATTTATTATAAAAGGAGGTTTTGAATTTCCCTCTATGGGTTTTCTTCCAAAGCTAATCAAAATAGCTTTTCATTTTTAGCATAAAAATCATTCTTTAAACAAAATGATTTTTTTTTTTACGCACATACATAACTAAAACATAAAAAATGATTTTTTAACAAACTTAAACAAACGGGTCTTGTATCTACCAAACACACTGACAATCCATTGAAAAACAAATATAATTTTTCTTCCCTTGATTAGATTTGGAGAAATAATCAATTATTGGTTCCTCTTATTTACTACGTATATCCTTAGCCACCACGGTTGTTTTGGCACTTATTAGTCCTAGACGAGATATCAGGTTTGGAGGATTGATTGCCGATATGCTCAGCCATTTCTCATTGAGACAATAGCATTTTTCATATGGATTTCAATATTTTTAAGATGCTAATTTCTTGGTATATTATGTCCTTAGTGAAAATAAGTTGATGGACAGAGATTTGATAAATAAATTGATCCAAGAATAATGCTTTTAGGGGACACTCTAGTAACATCTGGTCTCTTGCTGAAGTTCACCTATAACAGCATCACTCAAAAATAAATTTGTTTACATCTTTACAAATAACAATTTATTTAAGCAAAATATGCTTGTAGGTGTTTTTCTGATGTTAGTCCCTTTCTCCTTTAAGTTCGCCACCAGCCAAGATGTTTTAGGATCTTAATTGTCTTCTTCAGTCATTGTGAATTTTCCTGCATCAACGGTGTTTGACTATATCATGTTTGCCATTTATCCAATTTGGTTTTCATCTTTTTCTGTATGTCTTGCTTCTATAATTATTTGAGTATGCATTCAATAGGATGTTGGGCAGAAAATTATGCAATTTATGCAACAAAATAGGGGTGAGATATGCATTATGTCTGCATCTGGTTCCATCTCTAATGCCTCTCTCCGTCAACCAGCATCTTCAGGAGGCAACATTATGTATGAGGTGAAATATTAATAGCTGTTTTTTATCATTTTTTTATATATATATTTTTTTTATGTAATACTATGATCCCTATTCTTCAAACAATCTTCAAAAGGAAACGGAACTGTTGAAACTTGCAGCATATGGTTAAAAAATTGTTGAGTGTTATCATAACCAAGGCTCATATTCCTATTTATATTACTTTGAATTTTATCATTTTTATTTAATAATTTTCTCTTGTCGTAGAATCAGGTGATTAATCTTTTCTATTTGTGTTAAAGAAACCAAGGTTTATCTTTACATTTTACCCATGGTGTTCCAAAAAAGGCACTTGTGCATCCACATGTTGATTGAATATGCTAATAAAAAAATATTAGTATGTAAATGTTAATATAAAAAATACTATTAGCAATACATGATTGTCCCCGTCCATATTTTTTTATTTTTCTCTTATCTTATGTTCTCTTCATCTCTTTGATTTTATACATGCACGCATCTGTGTGCTTATGGCTAGTTTGTACGCACAACAGTTACTACTTACTAACCAAAAAAACTTTTTGTGGTCAAATCTGGATGTGGATGTTGGAGGTTCAAACAAAATAGTCTCATCCCACTTCTTATAAGAATATTTCTACCTTCAAGAGGACAGATAGGACGAACGTTTATGAAAATTGTTTCTATATTAGATTGGCAACTTAATGTTAGTGCGTAGCAGTGGTAATAATGGCTTATGGGTTAGTCTACTATTTAATAAAAACACTGTACTGCGGACAATAGTAGTTGATCTTTTTAATTTTTTAGGTGTATGATTTGGTCATGTGCTCATATTGTAGTTCTCATGTTTTAATTCTTTAATGCTTTGATATCAGGGTCGGTTTGATATCATTTCGCTTACTGGTTCCTATGTCCGTAATGAAACCGGAGGGCGAAGTGGTGGTCTTAGTGTATGCTTGTCTAATTCTGATGGACAAATCATAGGTGGTGGTGTTGGTGGGCCCCTTAAAGCTGCTGGTCCAGTTCAGGTAATCTTAGAAGGAACTGCAAATGAATTTGTAGGTTGGAAATATGAACCGCTGTCTTGCATTTGTTTTACCTTGTGAATATTGAGCGGTTCTCTACGTTGCATTTCCTGTTTCTTTTGTAGTTTCTGTTATAGCCTTTTTCTGGCAGAACAAAAAATATAATTCTGCACTTAATACAAAATCAACTTCTGCCAAAAAAGGGGGAAATGAGGTGGGCATCTAGAGTTGTGAGTAACTATGTAGTGAAATCAGTGGAATGAAAAGCAGGGATACATGTAGACTTTATATTGTTATAAATATAGATATTTCGGCAAAATCACTATTTTATTTTCCACCTTCCTGCTTTCACACCTACCAAGCACCACCTGATAATGAATTACATTCACACCAAGAAGTTATTTTTGATAAATAGTTAATCCCTACAGGTCATTGTCGGTACATTTTTTATGGACAACAAGAAGGACACTAGTGCTGGTGGAAAAGGTGATCCCTCTGCTGGTAAGTTGCCATCACCAGTTGGCGAGCCAGCATCAAGTTTAGGTTTCCACCAAACAGTCGACTCTTCCAGCGGGAATCCAATCCGAGGAAATGATGAACATCAAGCTATGGGTGGAAGCCATTACATGATTCAACAACTTGGTTTGCACGTGACACCTCCCAGGTCTACAGAGTGGGGGAGTCATCCAGATTCAAGACATGCTGGTTATGACCTGTCAGGTATGAAGTCCAGTGATTTTGGTATACCATCCTCCACTGATTTTCTTATGGTATAAAAGAGACTAAAGCGAAGTTCTCAATATTGCAGGAAGAACAGGTCATGGGTCTCACCAGTCTCCCGAGAATGGAGGCTATGACCAAATTCCTGATTGA

Protein sequence

>MS.gene050577.t1

MDSNDNQLSSFFHHHNHQQQQHQQQQQNSTTVSTTTTTTASPTNGLLPNTDGSHILYPHSVASSAVSSQLEPAKRKRGRPRKYGTPEQALAAKKASTSSFSPTLDNNKNTHSFSPSPSFTSKKSHSLSLGNAGQGFSAHVIAVAAGEDVGQKIMQFMQQNRGEICIMSASGSISNASLRQPASSGGNIMYEGRFDIISLTGSYVRNETGGRSGGLSVCLSNSDGQIIGGGVGGPLKAAGPVQVIVGTFFMDNKKDTSAGGKGDPSAGKLPSPVGEPASSLGFHQTVDSSSGNPIRGNDEHQAMGGSHYMIQQLGLHVTPPRSTEWGSHPDSRHAGYDLSGRTGHGSHQSPENGGYDQIPD