Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069199.t1 | XP_013444839.1 | 87.1 | 363 | 47 | 0 | 7 | 369 | 1 | 363 | 4.40E-167 | 597.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069199.t1 | Q9M2C9 | 46.9 | 343 | 173 | 5 | 31 | 369 | 21 | 358 | 7.1e-81 | 302.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069199.t1 | A0A072TN21 | 87.1 | 363 | 47 | 0 | 7 | 369 | 1 | 363 | 3.2e-167 | 597.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene069199 | 0.820264 | 7.52E-53 | -1.69E-46 |
| MS.gene04917 | MS.gene069199 | 0.81782 | 2.71E-52 | -1.69E-46 |
| MS.gene049861 | MS.gene069199 | 0.826207 | 3.08E-54 | -1.69E-46 |
| MS.gene04991 | MS.gene069199 | -0.809263 | 2.06E-50 | -1.69E-46 |
| MS.gene050114 | MS.gene069199 | 0.808039 | 3.77E-50 | -1.69E-46 |
| MS.gene050288 | MS.gene069199 | 0.809235 | 2.09E-50 | -1.69E-46 |
| MS.gene050317 | MS.gene069199 | 0.824533 | 7.67E-54 | -1.69E-46 |
| MS.gene051184 | MS.gene069199 | 0.813769 | 2.16E-51 | -1.69E-46 |
| MS.gene051757 | MS.gene069199 | 0.802501 | 5.45E-49 | -1.69E-46 |
| MS.gene052434 | MS.gene069199 | 0.815903 | 7.28E-52 | -1.69E-46 |
| MS.gene05344 | MS.gene069199 | -0.8149 | 1.22E-51 | -1.69E-46 |
| MS.gene05469 | MS.gene069199 | 0.81169 | 6.17E-51 | -1.69E-46 |
| MS.gene056752 | MS.gene069199 | 0.813367 | 2.65E-51 | -1.69E-46 |
| MS.gene056849 | MS.gene069199 | 0.82688 | 2.13E-54 | -1.69E-46 |
| MS.gene057999 | MS.gene069199 | 0.817542 | 3.12E-52 | -1.69E-46 |
| MS.gene059360 | MS.gene069199 | 0.80758 | 4.72E-50 | -1.69E-46 |
| MS.gene06010 | MS.gene069199 | 0.815821 | 7.60E-52 | -1.69E-46 |
| MS.gene06011 | MS.gene069199 | 0.826952 | 2.05E-54 | -1.69E-46 |
| MS.gene060702 | MS.gene069199 | 0.807829 | 4.18E-50 | -1.69E-46 |
| MS.gene060869 | MS.gene069199 | 0.813009 | 3.18E-51 | -1.69E-46 |
| MS.gene060870 | MS.gene069199 | 0.801755 | 7.75E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAATATTGTAAAAGAAAA+TGG | + | 56974:7676-7695 | None:intergenic | 15.0% |
| !! | TGAATGAAAATTGAAAATAA+GGG | - | 56974:7940-7959 | MS.gene069199:intron | 15.0% |
| !! | TTTACTTGGAAATAAATATT+TGG | - | 56974:7900-7919 | MS.gene069199:intron | 15.0% |
| !! | AACTATTGAATCTTCAATTT+CGG | + | 56974:9077-9096 | None:intergenic | 20.0% |
| !! | AATTGAAGATTCAATAGTTA+TGG | - | 56974:9078-9097 | MS.gene069199:CDS | 20.0% |
| !! | AGCATTTATATTATTGGAAA+AGG | - | 56974:9382-9401 | MS.gene069199:CDS | 20.0% |
| !! | ATAAATATGAAAGGAACAAA+TGG | + | 56974:8053-8072 | None:intergenic | 20.0% |
| !! | ATATTTAACTAGCACAAAAA+AGG | + | 56974:8324-8343 | None:intergenic | 20.0% |
| !! | ATGATTCTTATATTACAGTA+GGG | + | 56974:8886-8905 | None:intergenic | 20.0% |
| !! | GCATTTATATTATTGGAAAA+GGG | - | 56974:9383-9402 | MS.gene069199:CDS | 20.0% |
| !! | GTGAATGAAAATTGAAAATA+AGG | - | 56974:7939-7958 | MS.gene069199:intron | 20.0% |
| !! | TAACTATTTACTATCTGTTT+GGG | - | 56974:8596-8615 | MS.gene069199:intron | 20.0% |
| !! | TTAACTATTTACTATCTGTT+TGG | - | 56974:8595-8614 | MS.gene069199:intron | 20.0% |
| !!! | AAAACAGATCTAACATTTTT+CGG | - | 56974:7695-7714 | MS.gene069199:intron | 20.0% |
| !!! | AAATGTTATTTGAGTAAACA+TGG | - | 56974:7868-7887 | MS.gene069199:intron | 20.0% |
| !!! | GATTTTCATAAACAATGTTT+TGG | + | 56974:7735-7754 | None:intergenic | 20.0% |
| !!! | GGTAAAAGCATTTATATTAT+TGG | - | 56974:9376-9395 | MS.gene069199:CDS | 20.0% |
| ! | AAGATGAATTAGAAAAAGAC+AGG | + | 56974:8533-8552 | None:intergenic | 25.0% |
| ! | ACTATTGAATCTTCAATTTC+GGG | + | 56974:9076-9095 | None:intergenic | 25.0% |
| ! | AGTTCCTAGAAAATATCATT+CGG | - | 56974:7209-7228 | MS.gene069199:CDS | 25.0% |
| ! | CATGATTCTTATATTACAGT+AGG | + | 56974:8887-8906 | None:intergenic | 25.0% |
| ! | TATTGTAAAAGAAAATGGTG+AGG | + | 56974:7671-7690 | None:intergenic | 25.0% |
| ! | TGATTCTTATATTACAGTAG+GGG | + | 56974:8885-8904 | None:intergenic | 25.0% |
| ! | TTGGCAAAATATCATTAATG+AGG | - | 56974:8412-8431 | MS.gene069199:intron | 25.0% |
| !! | AAAACCGAATGATATTTTCT+AGG | + | 56974:7216-7235 | None:intergenic | 25.0% |
| !! | GATTTTCCTTCTCTTTTTTT+GGG | - | 56974:8268-8287 | MS.gene069199:intron | 25.0% |
| !! | GTTTTATATTACTACTATCG+AGG | - | 56974:8476-8495 | MS.gene069199:intron | 25.0% |
| !! | TGATTTTCCTTCTCTTTTTT+TGG | - | 56974:8267-8286 | MS.gene069199:intron | 25.0% |
| !!! | AAAATATCATTCGGTTTTGA+AGG | - | 56974:7218-7237 | MS.gene069199:CDS | 25.0% |
| !!! | ATGCAATTTTAGCTTTGAAT+AGG | + | 56974:8841-8860 | None:intergenic | 25.0% |
| !!! | ATTTTCCTTCTCTTTTTTTG+GGG | - | 56974:8269-8288 | MS.gene069199:intron | 25.0% |
| AAAATAAGGGTAGTGAGAAT+AGG | - | 56974:7953-7972 | MS.gene069199:intron | 30.0% | |
| AAAGAGAAATATCATCTGGA+AGG | + | 56974:7176-7195 | None:intergenic | 30.0% | |
| AAATAAGGGTAGTGAGAATA+GGG | - | 56974:7954-7973 | MS.gene069199:intron | 30.0% | |
| AACTCTGATCCAAAACAAAA+GGG | + | 56974:9252-9271 | None:intergenic | 30.0% | |
| AATATGAAAGGAACAAATGG+AGG | + | 56974:8050-8069 | None:intergenic | 30.0% | |
| AATTGTGATAGAGAGAACAT+GGG | + | 56974:7777-7796 | None:intergenic | 30.0% | |
| ACATGCTTGTATATTTGACT+TGG | - | 56974:8393-8412 | MS.gene069199:intron | 30.0% | |
| ACCTGGAAAAAAAAATGTGA+AGG | + | 56974:8913-8932 | None:intergenic | 30.0% | |
| ATTACTACTATCGAGGAATA+AGG | - | 56974:8483-8502 | MS.gene069199:intron | 30.0% | |
| ATTTGATCTTTCACATGCTT+AGG | - | 56974:8187-8206 | MS.gene069199:intron | 30.0% | |
| CACAAAAGAGAAATATCATC+TGG | + | 56974:7180-7199 | None:intergenic | 30.0% | |
| CACTTAATCAATACCTACTT+TGG | - | 56974:8751-8770 | MS.gene069199:intron | 30.0% | |
| GAAAAACTATATGCTATTGG+TGG | - | 56974:8959-8978 | MS.gene069199:intron | 30.0% | |
| GAAAATCTATTCTTCCTAAC+TGG | - | 56974:7748-7767 | MS.gene069199:intron | 30.0% | |
| GAAAATGGTGAGGAAAATAT+AGG | + | 56974:7661-7680 | None:intergenic | 30.0% | |
| GAAGATTCAATAGTTATGGA+CGG | - | 56974:9082-9101 | MS.gene069199:CDS | 30.0% | |
| GACGAAAAACTATATGCTAT+TGG | - | 56974:8956-8975 | MS.gene069199:intron | 30.0% | |
| GGAAATAAGCTCTTCTTATT+GGG | - | 56974:7465-7484 | MS.gene069199:CDS | 30.0% | |
| GTCTTCTGAATTAATTCCAA+TGG | - | 56974:7071-7090 | MS.gene069199:CDS | 30.0% | |
| GTTCCTTAACTTCAAAAATG+TGG | - | 56974:8230-8249 | MS.gene069199:intron | 30.0% | |
| TAATTGTGATAGAGAGAACA+TGG | + | 56974:7778-7797 | None:intergenic | 30.0% | |
| TATTTACTATCTGTTTGGGT+TGG | - | 56974:8600-8619 | MS.gene069199:intron | 30.0% | |
| TCAATTTCGGGAACTATATT+AGG | + | 56974:9064-9083 | None:intergenic | 30.0% | |
| TGATATTGGAAATATGGGAA+GGG | - | 56974:9432-9451 | MS.gene069199:CDS | 30.0% | |
| TGATTAACTTAGCTTCTGAA+GGG | + | 56974:7607-7626 | None:intergenic | 30.0% | |
| TTAAAGGAGATTTACCACAT+CGG | + | 56974:9120-9139 | None:intergenic | 30.0% | |
| TTCATTCACAGTAAAACTTG+TGG | + | 56974:7928-7947 | None:intergenic | 30.0% | |
| TTGTGATCAGAGACTAATTT+CGG | + | 56974:9478-9497 | None:intergenic | 30.0% | |
| ! | ATTTGATGGATCGTATACAA+CGG | + | 56974:9158-9177 | None:intergenic | 30.0% |
| ! | TCATGTTTACTGTTACGTTT+TGG | - | 56974:7353-7372 | MS.gene069199:CDS | 30.0% |
| ! | TGATATTTCTCTTTTGTGTC+TGG | - | 56974:7182-7201 | MS.gene069199:CDS | 30.0% |
| !! | CATGGTCTTAGTATTTTACT+TGG | - | 56974:7886-7905 | MS.gene069199:intron | 30.0% |
| !! | GTATTGATTAAGTGTGTGTT+TGG | + | 56974:8745-8764 | None:intergenic | 30.0% |
| !! | GTTGGTGATATTGGAAATAT+GGG | - | 56974:9427-9446 | MS.gene069199:CDS | 30.0% |
| !! | TGTTGGTGATATTGGAAATA+TGG | - | 56974:9426-9445 | MS.gene069199:CDS | 30.0% |
| !!! | GTACCACATTTTTGAAGTTA+AGG | + | 56974:8236-8255 | None:intergenic | 30.0% |
| !!! | TCCTTCACATTTTTTTTTCC+AGG | - | 56974:8909-8928 | MS.gene069199:intron | 30.0% |
| !!! | TTTTCCTTCTCTTTTTTTGG+GGG | - | 56974:8270-8289 | MS.gene069199:intron | 30.0% |
| !!! | TTTTGTTTTGGATCAGAGTT+CGG | - | 56974:9252-9271 | MS.gene069199:CDS | 30.0% |
| AATAAGCTCTTCTTATTGGG+TGG | - | 56974:7468-7487 | MS.gene069199:CDS | 35.0% | |
| AATTTCGGTATAGAAGAACC+CGG | + | 56974:9463-9482 | None:intergenic | 35.0% | |
| AGCATAAACTTGATGAGACA+TGG | - | 56974:7301-7320 | MS.gene069199:CDS | 35.0% | |
| ATTCAAGTGATCCTCATTCT+TGG | - | 56974:8993-9012 | MS.gene069199:intron | 35.0% | |
| GAACTCTGATCCAAAACAAA+AGG | + | 56974:9253-9272 | None:intergenic | 35.0% | |
| GATTAAGTGTGTGTTTGGAA+TGG | + | 56974:8740-8759 | None:intergenic | 35.0% | |
| GCTTAATTCTTTCAAAACGC+CGG | + | 56974:8718-8737 | None:intergenic | 35.0% | |
| GGGAAATAAGCTCTTCTTAT+TGG | - | 56974:7464-7483 | MS.gene069199:CDS | 35.0% | |
| GTCATGAAAAGGAAAGGAAT+GGG | - | 56974:7429-7448 | MS.gene069199:CDS | 35.0% | |
| GTGATATTGGAAATATGGGA+AGG | - | 56974:9431-9450 | MS.gene069199:CDS | 35.0% | |
| GTGATTAACTTAGCTTCTGA+AGG | + | 56974:7608-7627 | None:intergenic | 35.0% | |
| GTTGTATACGATCCATCAAA+TGG | - | 56974:9157-9176 | MS.gene069199:CDS | 35.0% | |
| TATTTACCTAGCAGTTGACA+AGG | + | 56974:7571-7590 | None:intergenic | 35.0% | |
| TTCAAGTGATCCTCATTCTT+GGG | - | 56974:8994-9013 | MS.gene069199:intron | 35.0% | |
| ! | ACTTTTGATCCTTCCACAAA+TGG | - | 56974:9019-9038 | MS.gene069199:CDS | 35.0% |
| ! | AGAAAAAGACAGGTGTGTTT+TGG | + | 56974:8523-8542 | None:intergenic | 35.0% |
| ! | GAAAAAGACAGGTGTGTTTT+GGG | + | 56974:8522-8541 | None:intergenic | 35.0% |
| !! | AGTAATACTCCACTGATTTG+TGG | - | 56974:7150-7169 | MS.gene069199:CDS | 35.0% |
| !! | GTTGTTGATGTTGGTGATAT+TGG | - | 56974:9418-9437 | MS.gene069199:CDS | 35.0% |
| !! | TCAAAAGTATCCCAAGAATG+AGG | + | 56974:9007-9026 | None:intergenic | 35.0% |
| !!! | TTTGTTTTGGATCAGAGTTC+GGG | - | 56974:9253-9272 | MS.gene069199:CDS | 35.0% |
| AAAACTTCCACTTTCCTAGC+AGG | + | 56974:8564-8583 | None:intergenic | 40.0% | |
| AAAGTAGCTCCTTGAAACGT+GGG | + | 56974:8642-8661 | None:intergenic | 40.0% | |
| AAATCCTGGAAGCTCATTCA+TGG | - | 56974:7393-7412 | MS.gene069199:CDS | 40.0% | |
| AACTCCCCCAAAAAAAGAGA+AGG | + | 56974:8277-8296 | None:intergenic | 40.0% | |
| AATCCTGGAAGCTCATTCAT+GGG | - | 56974:7394-7413 | MS.gene069199:CDS | 40.0% | |
| AATTCTTTCAAAACGCCGGT+AGG | + | 56974:8714-8733 | None:intergenic | 40.0% | |
| ACAATGCTTCTTTGAACTCG+TGG | - | 56974:7532-7551 | MS.gene069199:CDS | 40.0% | |
| ACAGTTGCATTCTACATAGG+CGG | - | 56974:8138-8157 | MS.gene069199:intron | 40.0% | |
| ACCATGATAACAAGAGAGCA+TGG | + | 56974:8779-8798 | None:intergenic | 40.0% | |
| ATGGATCTATGCTTTGTGCA+GGG | - | 56974:7320-7339 | MS.gene069199:CDS | 40.0% | |
| ATTCTTTCAAAACGCCGGTA+GGG | + | 56974:8713-8732 | None:intergenic | 40.0% | |
| CAATGCTTCTTTGAACTCGT+GGG | - | 56974:7533-7552 | MS.gene069199:CDS | 40.0% | |
| CCTACAGTTGCATTCTACAT+AGG | - | 56974:8135-8154 | MS.gene069199:intron | 40.0% | |
| CCTATGTAGAATGCAACTGT+AGG | + | 56974:8138-8157 | None:intergenic | 40.0% | |
| CGTCATGAAAAGGAAAGGAA+TGG | - | 56974:7428-7447 | MS.gene069199:CDS | 40.0% | |
| CTACTTTGCTTGTGAAGCAA+TGG | - | 56974:8934-8953 | MS.gene069199:intron | 40.0% | |
| GGCAAAATATACATCCGATG+TGG | - | 56974:9103-9122 | MS.gene069199:CDS | 40.0% | |
| TATACAACGGCATACACATG+AGG | + | 56974:9145-9164 | None:intergenic | 40.0% | |
| TGCTTTGTGCAGGGATAAAT+TGG | - | 56974:7329-7348 | MS.gene069199:CDS | 40.0% | |
| TTGATCCTTCCACAAATGGT+TGG | - | 56974:9023-9042 | MS.gene069199:CDS | 40.0% | |
| ! | CATGATAACAAGAGAGCATG+GGG | + | 56974:8777-8796 | None:intergenic | 40.0% |
| ! | CCATGATAACAAGAGAGCAT+GGG | + | 56974:8778-8797 | None:intergenic | 40.0% |
| ! | CTATATGCTATTGGTGGCAT+AGG | - | 56974:8965-8984 | MS.gene069199:intron | 40.0% |
| ! | GCATACACATGAGGTGTTAA+AGG | + | 56974:9136-9155 | None:intergenic | 40.0% |
| !! | CAACGGAATCCCTTTTGTTT+TGG | - | 56974:9240-9259 | MS.gene069199:CDS | 40.0% |
| !! | TTACTATCTGTTTGGGTTGG+CGG | - | 56974:8603-8622 | MS.gene069199:intron | 40.0% |
| !!! | AGGAATGGGTTTTGAAGCTT+TGG | - | 56974:7443-7462 | MS.gene069199:CDS | 40.0% |
| !!! | CATCTTTTTTGAAGCCTGCT+AGG | - | 56974:8547-8566 | MS.gene069199:intron | 40.0% |
| !!! | GGAATGGGTTTTGAAGCTTT+GGG | - | 56974:7444-7463 | MS.gene069199:CDS | 40.0% |
| !!! | TTCTCTTTTTTTGGGGGAGT+TGG | - | 56974:8276-8295 | MS.gene069199:intron | 40.0% |
| AAAGCCAAACCCACGTTTCA+AGG | - | 56974:8630-8649 | MS.gene069199:intron | 45.0% | |
| AAATATGGGAAGGGCGATAC+CGG | - | 56974:9441-9460 | MS.gene069199:CDS | 45.0% | |
| ACCAACTGCAACAAGTTTGC+AGG | + | 56974:9359-9378 | None:intergenic | 45.0% | |
| ACGATCCATCAAATGGCACA+TGG | - | 56974:9164-9183 | MS.gene069199:CDS | 45.0% | |
| AGCACTGTGGTTGTTGATGT+TGG | - | 56974:9409-9428 | MS.gene069199:CDS | 45.0% | |
| ATCCTGGAAGCTCATTCATG+GGG | - | 56974:7395-7414 | MS.gene069199:CDS | 45.0% | |
| ATTCCGTTGACAACAACTGC+AGG | + | 56974:9229-9248 | None:intergenic | 45.0% | |
| CATGGATCTATGCTTTGTGC+AGG | - | 56974:7319-7338 | MS.gene069199:CDS | 45.0% | |
| CCAACTGCAACAAGTTTGCA+GGG | + | 56974:9358-9377 | None:intergenic | 45.0% | |
| CCTCACGTCATGAAAAGGAA+AGG | - | 56974:7423-7442 | MS.gene069199:CDS | 45.0% | |
| CTACCTCGTCAAGAAAATCC+TGG | - | 56974:7379-7398 | MS.gene069199:CDS | 45.0% | |
| GAAAGGAACAAATGGAGGAG+TGG | + | 56974:8045-8064 | None:intergenic | 45.0% | |
| GAAAGTAGCTCCTTGAAACG+TGG | + | 56974:8643-8662 | None:intergenic | 45.0% | |
| GATGTCCAACCATTTGTGGA+AGG | + | 56974:9031-9050 | None:intergenic | 45.0% | |
| GGTAGTGAGAATAGGGAAGA+AGG | - | 56974:7961-7980 | MS.gene069199:intron | 45.0% | |
| GTGAGATGTCCAACCATTTG+TGG | + | 56974:9035-9054 | None:intergenic | 45.0% | |
| TGAAGGCTGTCTCGAAAAGA+TGG | - | 56974:7235-7254 | MS.gene069199:CDS | 45.0% | |
| TTCACAAGCAAAGTAGCACC+TGG | + | 56974:8930-8949 | None:intergenic | 45.0% | |
| TTCCACCTCACGTCATGAAA+AGG | - | 56974:7418-7437 | MS.gene069199:CDS | 45.0% | |
| ! | CAGGATTTTCTTGACGAGGT+AGG | + | 56974:7381-7400 | None:intergenic | 45.0% |
| ! | CCAATGGAGCATTTAGACGA+CGG | - | 56974:7087-7106 | MS.gene069199:CDS | 45.0% |
| ! | CCCATGCTCTCTTGTTATCA+TGG | - | 56974:8775-8794 | MS.gene069199:intron | 45.0% |
| ! | CCTTTCCTTTTCATGACGTG+AGG | + | 56974:7426-7445 | None:intergenic | 45.0% |
| ! | CTTCCAGGATTTTCTTGACG+AGG | + | 56974:7385-7404 | None:intergenic | 45.0% |
| ! | GTTTCAAGGAGCTACTTTCG+TGG | - | 56974:8644-8663 | MS.gene069199:intron | 45.0% |
| ! | TTCCTTTTCATGACGTGAGG+TGG | + | 56974:7423-7442 | None:intergenic | 45.0% |
| ! | TTTGAAGCCTGCTAGGAAAG+TGG | - | 56974:8554-8573 | MS.gene069199:intron | 45.0% |
| !! | TGTTGCCATGTGCCATTTGA+TGG | + | 56974:9172-9191 | None:intergenic | 45.0% |
| !!! | TTCTAGCTTTTGCTGCAACG+TGG | - | 56974:8685-8704 | MS.gene069199:intron | 45.0% |
| !! | TAAAAAAATATAAATATGAA+AGG | + | 56974:8062-8081 | None:intergenic | 5.0% |
| AACCCCATGAATGAGCTTCC+AGG | + | 56974:7400-7419 | None:intergenic | 50.0% | |
| AATATGGGAAGGGCGATACC+GGG | - | 56974:9442-9461 | MS.gene069199:CDS | 50.0% | |
| ACTGCAACAAGTTTGCAGGG+TGG | + | 56974:9355-9374 | None:intergenic | 50.0% | |
| AGCTCCTTGAAACGTGGGTT+TGG | + | 56974:8637-8656 | None:intergenic | 50.0% | |
| AGGCTGTCTCGAAAAGATGG+AGG | - | 56974:7238-7257 | MS.gene069199:CDS | 50.0% | |
| CAGACACCGACATGGTTTCA+GGG | - | 56974:9194-9213 | MS.gene069199:CDS | 50.0% | |
| CCGTCGTCTAAATGCTCCAT+TGG | + | 56974:7090-7109 | None:intergenic | 50.0% | |
| CTCGAAAAGATGGAGGGACT+TGG | - | 56974:7245-7264 | MS.gene069199:CDS | 50.0% | |
| CTCTTCTTATTGGGTGGCTG+TGG | - | 56974:7474-7493 | MS.gene069199:CDS | 50.0% | |
| CTGCTTCCTTGTCAACTGCT+AGG | - | 56974:7562-7581 | MS.gene069199:CDS | 50.0% | |
| GAGAACATGGGAAGCCAGTT+AGG | + | 56974:7765-7784 | None:intergenic | 50.0% | |
| GGCTGTCTCGAAAAGATGGA+GGG | - | 56974:7239-7258 | MS.gene069199:CDS | 50.0% | |
| GGTCCTGCAGTTGTTGTCAA+CGG | - | 56974:9223-9242 | MS.gene069199:CDS | 50.0% | |
| TCTCCACCCTGAAACCATGT+CGG | + | 56974:9203-9222 | None:intergenic | 50.0% | |
| TCTGGAAGGCCACAAATCAG+TGG | + | 56974:7162-7181 | None:intergenic | 50.0% | |
| TGGAAAAGGGCTTAGCACTG+TGG | - | 56974:9396-9415 | MS.gene069199:CDS | 50.0% | |
| TGGAGGAGTGGAAGTTGACA+AGG | + | 56974:8033-8052 | None:intergenic | 50.0% | |
| TGGATCAGAGTTCGGGTACT+AGG | - | 56974:9260-9279 | MS.gene069199:CDS | 50.0% | |
| ! | CTTCTGAAGGGAAAGTCGTG+AGG | + | 56974:7595-7614 | None:intergenic | 50.0% |
| !! | ACTTGGTTTGCAGCGAAGAG+TGG | - | 56974:7262-7281 | MS.gene069199:CDS | 50.0% |
| !! | AGGTGTGTTTTGGGCGTGAA+GGG | + | 56974:8513-8532 | None:intergenic | 50.0% |
| !! | CAGGGTGGTCTTGTAAGCAA+CGG | + | 56974:9340-9359 | None:intergenic | 50.0% |
| !! | CCCTGCAAACTTGTTGCAGT+TGG | - | 56974:9355-9374 | MS.gene069199:CDS | 50.0% |
| !! | TATCTGTTTGGGTTGGCGGT+GGG | - | 56974:8607-8626 | MS.gene069199:intron | 50.0% |
| ACACCGACATGGTTTCAGGG+TGG | - | 56974:9197-9216 | MS.gene069199:CDS | 55.0% | |
| AGACGCGAGTGGATACTGGT+CGG | - | 56974:9304-9323 | MS.gene069199:CDS | 55.0% | |
| AGAGAGACGCGAGTGGATAC+TGG | - | 56974:9300-9319 | MS.gene069199:CDS | 55.0% | |
| GACATGGTTTCAGGGTGGAG+AGG | - | 56974:9202-9221 | MS.gene069199:CDS | 55.0% | |
| GCAACATGCAGACACCGACA+TGG | - | 56974:9186-9205 | MS.gene069199:CDS | 55.0% | |
| GCAGACACCGACATGGTTTC+AGG | - | 56974:9193-9212 | MS.gene069199:CDS | 55.0% | |
| GGCATAAAGAGAGACGCGAG+TGG | - | 56974:9293-9312 | MS.gene069199:CDS | 55.0% | |
| TCTTATTGGGTGGCTGTGGC+TGG | - | 56974:7478-7497 | MS.gene069199:CDS | 55.0% | |
| ! | AGAGAGCATGGGGCCAAAGT+AGG | + | 56974:8767-8786 | None:intergenic | 55.0% |
| ! | CGGGTACTAGGTTGACGATG+TGG | - | 56974:9272-9291 | MS.gene069199:CDS | 55.0% |
| !! | CAGGTGTGTTTTGGGCGTGA+AGG | + | 56974:8514-8533 | None:intergenic | 55.0% |
| !! | CTATCTGTTTGGGTTGGCGG+TGG | - | 56974:8606-8625 | MS.gene069199:intron | 55.0% |
| GCTGCAACGTGGTTCCCTAC+CGG | - | 56974:8696-8715 | MS.gene069199:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 56974 | gene | 7071 | 9528 | 7071 | ID=MS.gene069199 |
| 56974 | mRNA | 7071 | 9528 | 7071 | ID=MS.gene069199.t1;Parent=MS.gene069199 |
| 56974 | exon | 9016 | 9528 | 9016 | ID=MS.gene069199.t1.exon1;Parent=MS.gene069199.t1 |
| 56974 | CDS | 9016 | 9528 | 9016 | ID=cds.MS.gene069199.t1;Parent=MS.gene069199.t1 |
| 56974 | exon | 7071 | 7668 | 7071 | ID=MS.gene069199.t1.exon2;Parent=MS.gene069199.t1 |
| 56974 | CDS | 7071 | 7668 | 7071 | ID=cds.MS.gene069199.t1;Parent=MS.gene069199.t1 |
| Gene Sequence |
| Protein sequence |
