Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070813.t1 | XP_003606163.2 | 98 | 492 | 10 | 0 | 1 | 492 | 1 | 492 | 6.30E-278 | 966.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070813.t1 | Q93ZB9 | 58.6 | 486 | 200 | 1 | 6 | 491 | 9 | 493 | 1.5e-171 | 604.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070813.t1 | G7JJM0 | 98.0 | 492 | 10 | 0 | 1 | 492 | 1 | 492 | 4.5e-278 | 966.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049255 | MS.gene070813 | 0.805406 | 1.36E-49 | -1.69E-46 |
MS.gene049821 | MS.gene070813 | 0.829525 | 4.90E-55 | -1.69E-46 |
MS.gene049887 | MS.gene070813 | 0.804082 | 2.56E-49 | -1.69E-46 |
MS.gene050689 | MS.gene070813 | 0.815535 | 8.80E-52 | -1.69E-46 |
MS.gene050838 | MS.gene070813 | 0.848979 | 4.34E-60 | -1.69E-46 |
MS.gene051003 | MS.gene070813 | 0.805945 | 1.04E-49 | -1.69E-46 |
MS.gene051233 | MS.gene070813 | 0.839538 | 1.49E-57 | -1.69E-46 |
MS.gene051234 | MS.gene070813 | 0.817599 | 3.03E-52 | -1.69E-46 |
MS.gene051328 | MS.gene070813 | 0.80457 | 2.03E-49 | -1.69E-46 |
MS.gene052133 | MS.gene070813 | 0.844057 | 9.57E-59 | -1.69E-46 |
MS.gene052335 | MS.gene070813 | 0.822895 | 1.85E-53 | -1.69E-46 |
MS.gene052947 | MS.gene070813 | 0.803964 | 2.71E-49 | -1.69E-46 |
MS.gene053058 | MS.gene070813 | 0.814327 | 1.63E-51 | -1.69E-46 |
MS.gene053563 | MS.gene070813 | 0.800773 | 1.23E-48 | -1.69E-46 |
MS.gene053564 | MS.gene070813 | 0.805667 | 1.20E-49 | -1.69E-46 |
MS.gene053581 | MS.gene070813 | 0.848513 | 5.84E-60 | -1.69E-46 |
MS.gene05364 | MS.gene070813 | 0.806804 | 6.89E-50 | -1.69E-46 |
MS.gene056043 | MS.gene070813 | -0.802654 | 5.06E-49 | -1.69E-46 |
MS.gene057694 | MS.gene070813 | 0.80558 | 1.25E-49 | -1.69E-46 |
MS.gene057705 | MS.gene070813 | 0.856949 | 2.28E-62 | -1.69E-46 |
MS.gene058261 | MS.gene070813 | 0.807529 | 4.83E-50 | -1.69E-46 |
MS.gene058852 | MS.gene070813 | 0.817227 | 3.68E-52 | -1.69E-46 |
MS.gene058976 | MS.gene070813 | 0.805506 | 1.29E-49 | -1.69E-46 |
MS.gene05978 | MS.gene070813 | 0.801162 | 1.03E-48 | -1.69E-46 |
MS.gene059787 | MS.gene070813 | 0.808441 | 3.09E-50 | -1.69E-46 |
MS.gene060587 | MS.gene070813 | 0.810372 | 1.19E-50 | -1.69E-46 |
MS.gene061006 | MS.gene070813 | 0.812762 | 3.60E-51 | -1.69E-46 |
MS.gene061100 | MS.gene070813 | 0.811525 | 6.70E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070813.t1 | MTR_4g053880 | 97.967 | 492 | 10 | 0 | 1 | 492 | 1 | 492 | 0.0 | 1001 |
MS.gene070813.t1 | MTR_2g086070 | 72.041 | 490 | 137 | 0 | 3 | 492 | 2 | 491 | 0.0 | 764 |
MS.gene070813.t1 | MTR_2g086090 | 68.980 | 490 | 151 | 1 | 3 | 492 | 4 | 492 | 0.0 | 729 |
MS.gene070813.t1 | MTR_4g053785 | 68.367 | 490 | 155 | 0 | 3 | 492 | 2 | 491 | 0.0 | 726 |
MS.gene070813.t1 | MTR_4g053900 | 47.967 | 492 | 252 | 2 | 5 | 492 | 4 | 495 | 2.14e-170 | 489 |
MS.gene070813.t1 | MTR_4g054820 | 48.871 | 487 | 241 | 6 | 10 | 489 | 6 | 491 | 6.11e-169 | 486 |
MS.gene070813.t1 | MTR_5g072540 | 46.138 | 492 | 258 | 4 | 5 | 492 | 4 | 492 | 3.11e-165 | 476 |
MS.gene070813.t1 | MTR_5g045330 | 46.247 | 493 | 246 | 3 | 3 | 492 | 2 | 478 | 5.93e-160 | 462 |
MS.gene070813.t1 | MTR_1g054635 | 39.279 | 499 | 292 | 6 | 1 | 492 | 114 | 608 | 5.43e-123 | 372 |
MS.gene070813.t1 | MTR_6g034620 | 45.429 | 361 | 160 | 5 | 135 | 492 | 1 | 327 | 2.56e-104 | 315 |
MS.gene070813.t1 | MTR_4g054220 | 51.625 | 277 | 131 | 1 | 10 | 283 | 6 | 282 | 3.60e-101 | 305 |
MS.gene070813.t1 | MTR_5g072550 | 44.444 | 252 | 134 | 3 | 244 | 492 | 1 | 249 | 1.20e-71 | 228 |
MS.gene070813.t1 | MTR_6g039280 | 40.161 | 249 | 116 | 2 | 244 | 492 | 1 | 216 | 4.50e-51 | 173 |
MS.gene070813.t1 | MTR_4g054240 | 40.566 | 212 | 123 | 3 | 283 | 492 | 20 | 230 | 2.59e-46 | 161 |
MS.gene070813.t1 | MTR_6g034660 | 49.219 | 128 | 65 | 0 | 3 | 130 | 2 | 129 | 1.85e-36 | 131 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070813.t1 | AT4G33790 | 58.642 | 486 | 200 | 1 | 6 | 491 | 9 | 493 | 0.0 | 619 |
MS.gene070813.t1 | AT3G44540 | 54.321 | 486 | 220 | 2 | 9 | 492 | 7 | 492 | 0.0 | 554 |
MS.gene070813.t1 | AT5G22500 | 52.263 | 486 | 228 | 3 | 9 | 492 | 7 | 490 | 0.0 | 543 |
MS.gene070813.t1 | AT3G44550 | 52.449 | 490 | 226 | 4 | 9 | 492 | 7 | 495 | 0.0 | 525 |
MS.gene070813.t1 | AT3G44560 | 51.318 | 493 | 233 | 4 | 6 | 492 | 4 | 495 | 2.02e-175 | 502 |
MS.gene070813.t1 | AT4G33790 | 58.530 | 381 | 157 | 1 | 111 | 491 | 1 | 380 | 2.25e-173 | 493 |
MS.gene070813.t1 | AT3G44560 | 52.834 | 441 | 204 | 3 | 6 | 443 | 4 | 443 | 1.14e-159 | 461 |
MS.gene070813.t1 | AT5G22500 | 54.592 | 392 | 175 | 2 | 9 | 399 | 7 | 396 | 3.12e-159 | 457 |
MS.gene070813.t1 | AT3G44560 | 54.135 | 399 | 179 | 3 | 6 | 401 | 4 | 401 | 4.96e-148 | 429 |
MS.gene070813.t1 | AT3G44550 | 51.421 | 387 | 182 | 3 | 111 | 492 | 1 | 386 | 2.11e-140 | 409 |
MS.gene070813.t1 | AT3G44540 | 58.689 | 305 | 125 | 1 | 9 | 312 | 7 | 311 | 3.75e-130 | 380 |
MS.gene070813.t1 | AT3G44540 | 58.689 | 305 | 125 | 1 | 9 | 312 | 7 | 311 | 3.75e-130 | 380 |
MS.gene070813.t1 | AT5G22420 | 50.959 | 365 | 174 | 4 | 116 | 479 | 6 | 366 | 9.57e-130 | 381 |
MS.gene070813.t1 | AT3G11980 | 40.361 | 498 | 277 | 8 | 7 | 492 | 124 | 613 | 2.00e-125 | 379 |
MS.gene070813.t1 | AT5G22420 | 48.257 | 373 | 188 | 4 | 108 | 479 | 34 | 402 | 1.17e-122 | 365 |
MS.gene070813.t1 | AT5G22420 | 62.000 | 50 | 19 | 0 | 9 | 58 | 7 | 56 | 4.51e-13 | 71.2 |
MS.gene070813.t1 | AT5G22420 | 50.284 | 352 | 170 | 4 | 129 | 479 | 3 | 350 | 1.97e-122 | 362 |
MS.gene070813.t1 | AT5G22420 | 50.284 | 352 | 170 | 4 | 129 | 479 | 3 | 350 | 1.97e-122 | 362 |
MS.gene070813.t1 | AT5G22420 | 48.734 | 316 | 157 | 4 | 165 | 479 | 4 | 315 | 2.65e-103 | 312 |
MS.gene070813.t1 | AT3G56700 | 36.646 | 483 | 285 | 7 | 7 | 488 | 77 | 539 | 4.42e-103 | 319 |
MS.gene070813.t1 | AT5G22420 | 48.000 | 300 | 151 | 4 | 181 | 479 | 1 | 296 | 7.54e-96 | 292 |
MS.gene070813.t1 | AT5G22420 | 48.000 | 300 | 151 | 4 | 181 | 479 | 1 | 296 | 7.54e-96 | 292 |
MS.gene070813.t1 | AT3G56700 | 34.990 | 483 | 272 | 8 | 7 | 488 | 77 | 518 | 7.65e-92 | 289 |
Find 96 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCGTTACTTGCTTCCTTTAA+AGG | 0.098124 | 4.1:-44646313 | MS.gene070813:intron |
AGAAATTGAATAACCTTTAA+AGG | 0.182202 | 4.1:+44646300 | None:intergenic |
CAACTTGGTGTTTCACTAAA+TGG | 0.185971 | 4.1:-44647758 | MS.gene070813:CDS |
TAAAATTGCCATGAAGGATT+TGG | 0.220004 | 4.1:-44647645 | MS.gene070813:CDS |
TGCGGTTGGTTGAACTTTAC+AGG | 0.263042 | 4.1:-44645708 | MS.gene070813:CDS |
ATGCTTCCTTGCAGACTTAG+AGG | 0.301520 | 4.1:-44647133 | MS.gene070813:CDS |
TTCATGAACATTCATATTCC+TGG | 0.304377 | 4.1:-44645389 | MS.gene070813:CDS |
TTCCATTCCCAAATCCTTCA+TGG | 0.309189 | 4.1:+44647637 | None:intergenic |
CCAAGAAAATTTCAATTTGA+AGG | 0.310827 | 4.1:-44648898 | MS.gene070813:CDS |
TTTCCACCAATGGATCAATT+TGG | 0.317863 | 4.1:-44651744 | None:intergenic |
GACAGTTTAATTGTTGCATA+TGG | 0.320149 | 4.1:-44647171 | MS.gene070813:CDS |
TGCAACAATTAAACTGTCTA+TGG | 0.329367 | 4.1:+44647176 | None:intergenic |
CCTTGAGCATAAGAATGTTT+TGG | 0.340479 | 4.1:-44651706 | MS.gene070813:CDS |
GGTAACTTTGCCAACTTTGA+TGG | 0.345674 | 4.1:+44646377 | None:intergenic |
AACGAATGTACATGTATCTT+TGG | 0.350065 | 4.1:+44646331 | None:intergenic |
AAAATTGCCATGAAGGATTT+GGG | 0.357512 | 4.1:-44647644 | MS.gene070813:CDS |
GCATTGGGTTTAAATACATT+TGG | 0.366725 | 4.1:-44648659 | MS.gene070813:CDS |
AGATAAAGTTTCTTCACATT+TGG | 0.367398 | 4.1:+44651507 | None:intergenic |
CAGAATATAGTTTCACTTGA+AGG | 0.368930 | 4.1:+44645352 | None:intergenic |
CAAAGAACCTTTCCCTGGTT+GGG | 0.394468 | 4.1:-44647336 | MS.gene070813:CDS |
CTTCCTTCCTTGTCAAAACA+TGG | 0.404754 | 4.1:+44646402 | None:intergenic |
GTATAACTCTTGAAGTAGAT+TGG | 0.417054 | 4.1:+44648872 | None:intergenic |
AGTTGGCAAAGTTACCGTAT+TGG | 0.425068 | 4.1:-44646370 | MS.gene070813:CDS |
TAAGTGCTGGTAATGATTGT+AGG | 0.428342 | 4.1:+44647359 | None:intergenic |
GTGCTTGTCCACGTATCAAC+AGG | 0.430498 | 4.1:-44648590 | MS.gene070813:intron |
GAAGCAGATCCCTGCTGATA+TGG | 0.433499 | 4.1:-44646568 | MS.gene070813:intron |
TTAATTGTTGCATATGGTAA+AGG | 0.436186 | 4.1:-44647165 | MS.gene070813:CDS |
CAACCAACCGCATCACAGTA+TGG | 0.442539 | 4.1:+44645719 | None:intergenic |
AAGGAATATTTGACAATGCC+AGG | 0.451920 | 4.1:+44645371 | None:intergenic |
CCTTTCCCTGGTTGGGTCGA+AGG | 0.461087 | 4.1:-44647329 | MS.gene070813:CDS |
AGGCCCTATGTGTTCTTCAA+TGG | 0.461502 | 4.1:-44645688 | MS.gene070813:CDS |
ATCACGTGGGTTCATCTGTT+GGG | 0.467939 | 4.1:-44646482 | MS.gene070813:CDS |
TTTGTAAAGACATATGTGTT+TGG | 0.467992 | 4.1:+44647443 | None:intergenic |
TCAGAGCAAAATTATATGGT+TGG | 0.482019 | 4.1:-44647466 | MS.gene070813:intron |
CTTACTCCTTCGACCCAACC+AGG | 0.485945 | 4.1:+44647323 | None:intergenic |
TATCACGTGGGTTCATCTGT+TGG | 0.489042 | 4.1:-44646483 | MS.gene070813:CDS |
CTGGTTGGGTCGAAGGAGTA+AGG | 0.490574 | 4.1:-44647322 | MS.gene070813:intron |
AGTGAAACACCAAGTTGGTA+TGG | 0.494139 | 4.1:+44647764 | None:intergenic |
TGAGGAAAAGAGAGTAGTTG+AGG | 0.494819 | 4.1:-44647714 | MS.gene070813:CDS |
GCATTCACCACCATATCAGC+AGG | 0.497234 | 4.1:+44646558 | None:intergenic |
GGATACTAAAATTGCCATGA+AGG | 0.498148 | 4.1:-44647651 | MS.gene070813:CDS |
ACAAAGAACCTTTCCCTGGT+TGG | 0.498389 | 4.1:-44647337 | MS.gene070813:CDS |
GAAAGGTTCTTTGTAAGTGC+TGG | 0.505594 | 4.1:+44647346 | None:intergenic |
TGCCATGAAGGATTTGGGAA+TGG | 0.510799 | 4.1:-44647639 | MS.gene070813:CDS |
AATGCTAGTGGGAACTATGA+AGG | 0.527078 | 4.1:-44647408 | MS.gene070813:CDS |
TATGTCTTTACAAAGGCAAT+GGG | 0.529172 | 4.1:-44647434 | MS.gene070813:CDS |
GGACTTGTTCAAATTGCTGA+AGG | 0.533109 | 4.1:-44648988 | MS.gene070813:CDS |
ACAAGAGGGAGCTACTGAAA+AGG | 0.533743 | 4.1:-44647672 | MS.gene070813:CDS |
GAAGGAAGAGCCATCAAAGT+TGG | 0.538912 | 4.1:-44646387 | MS.gene070813:CDS |
ATACTGCCAAATTGATCCAT+TGG | 0.540433 | 4.1:+44651738 | None:intergenic |
CTAAGACTCTCATATCTCAC+TGG | 0.540860 | 4.1:+44646456 | None:intergenic |
TGCAGATATGATGTAGCATT+GGG | 0.544440 | 4.1:-44648674 | MS.gene070813:intron |
AAAGAGAGTTACTCTTTGCA+AGG | 0.545203 | 4.1:+44651664 | None:intergenic |
ACTTACAAAGAACCTTTCCC+TGG | 0.545331 | 4.1:-44647341 | MS.gene070813:CDS |
CCAAAACATTCTTATGCTCA+AGG | 0.551300 | 4.1:+44651706 | None:intergenic |
AAGACAAAGTGGAGTAGAGA+TGG | 0.553343 | 4.1:-44645456 | MS.gene070813:CDS |
ATGCAGATATGATGTAGCAT+TGG | 0.559269 | 4.1:-44648675 | MS.gene070813:intron |
ATTGAACATGCTTCAACAAG+AGG | 0.567383 | 4.1:-44647687 | MS.gene070813:CDS |
GAATGCAATGCTAGTGGCCA+TGG | 0.569856 | 4.1:-44646541 | MS.gene070813:CDS |
CAAATAGCAGCAAGACAAAG+TGG | 0.573597 | 4.1:-44645467 | MS.gene070813:CDS |
CAACAACTAACTTTGATGAA+AGG | 0.576712 | 4.1:-44648818 | MS.gene070813:intron |
ATATGTCTTTACAAAGGCAA+TGG | 0.586877 | 4.1:-44647435 | MS.gene070813:CDS |
ACGCCATTGAAGAACACATA+GGG | 0.595025 | 4.1:+44645685 | None:intergenic |
GAGAGGAGGACTGATAGTAG+AGG | 0.600345 | 4.1:-44647789 | MS.gene070813:CDS |
GGCAATGGGAGAAATGCTAG+TGG | 0.600756 | 4.1:-44647420 | MS.gene070813:CDS |
CATTTAGTGAAACACCAAGT+TGG | 0.601093 | 4.1:+44647759 | None:intergenic |
TGAAGGATTTGGGAATGGAA+AGG | 0.604642 | 4.1:-44647634 | MS.gene070813:intron |
CCTTCGACCCAACCAGGGAA+AGG | 0.605631 | 4.1:+44647329 | None:intergenic |
TTAAATGTAGCATACGTATG+TGG | 0.610970 | 4.1:-44647815 | MS.gene070813:intron |
AAACTGCCTCTAAGTCTGCA+AGG | 0.617704 | 4.1:+44647127 | None:intergenic |
AAATTGCTGAAGGAAAATCA+TGG | 0.619305 | 4.1:-44648978 | MS.gene070813:CDS |
GTTTCACTAAATGGAGTGCA+AGG | 0.619534 | 4.1:-44647749 | MS.gene070813:CDS |
AATACAAACCTGTTGATACG+TGG | 0.632502 | 4.1:+44648582 | None:intergenic |
TGTAGGTCTCACAATAACAA+TGG | 0.633502 | 4.1:+44647376 | None:intergenic |
TTACTCCTTCGACCCAACCA+GGG | 0.637146 | 4.1:+44647324 | None:intergenic |
GCATACGTATGTGGAGAGAG+AGG | 0.637651 | 4.1:-44647806 | MS.gene070813:CDS |
CACGCCATTGAAGAACACAT+AGG | 0.641905 | 4.1:+44645684 | None:intergenic |
TGATGATAGCATATATCACG+TGG | 0.642564 | 4.1:-44646496 | MS.gene070813:CDS |
TTGAACATGCTTCAACAAGA+GGG | 0.645462 | 4.1:-44647686 | MS.gene070813:CDS |
GGTCCATACTGTGATGCGGT+TGG | 0.646323 | 4.1:-44645722 | MS.gene070813:CDS |
CACTAGAAGACTGCACAATG+AGG | 0.647867 | 4.1:-44651454 | MS.gene070813:intron |
AATATGTACTTTGAAAATAG+CGG | 0.651662 | 4.1:+44645761 | None:intergenic |
GCAAGGACTAGACATTGATG+AGG | 0.656577 | 4.1:-44647732 | MS.gene070813:CDS |
TTGATTTGCATGACTCACCA+TGG | 0.657844 | 4.1:+44646524 | None:intergenic |
GTAGAGGATCCATACCAACT+TGG | 0.659399 | 4.1:-44647773 | MS.gene070813:CDS |
TACGTATGTGGAGAGAGAGG+AGG | 0.668461 | 4.1:-44647803 | MS.gene070813:CDS |
AAACACATATGTCTTTACAA+AGG | 0.671076 | 4.1:-44647441 | MS.gene070813:CDS |
GCAGATCCCTGCTGATATGG+TGG | 0.671477 | 4.1:-44646565 | MS.gene070813:intron |
AAAAGTGACTCTAGTGCCTG+GGG | 0.681356 | 4.1:-44648928 | MS.gene070813:CDS |
GCAATGGGAGAAATGCTAGT+GGG | 0.681775 | 4.1:-44647419 | MS.gene070813:CDS |
TGATATATGCTATCATCACA+AGG | 0.681859 | 4.1:+44646501 | None:intergenic |
CATTCACCACCATATCAGCA+GGG | 0.685104 | 4.1:+44646559 | None:intergenic |
GGAAGGTCCATACTGTGATG+CGG | 0.690975 | 4.1:-44645726 | MS.gene070813:CDS |
GGTGGTGAATGCAATGCTAG+TGG | 0.712141 | 4.1:-44646547 | MS.gene070813:CDS |
GATGATAGCATATATCACGT+GGG | 0.729775 | 4.1:-44646495 | MS.gene070813:CDS |
ATACGTGGACAAGCACCCTG+AGG | 0.756197 | 4.1:+44648597 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAATATATATTT+AGG | + | chr4.1:44647904-44647923 | None:intergenic | 0.0% |
!! | TATATATATATATATAATAT+TGG | - | chr4.1:44648630-44648649 | MS.gene070813:CDS | 0.0% |
!! | AAAAAAATTATTTGTGTATA+AGG | - | chr4.1:44645727-44645746 | MS.gene070813:CDS | 10.0% |
!! | AAATATCTTGAATAATATAT+TGG | + | chr4.1:44646843-44646862 | None:intergenic | 10.0% |
!! | ATTAACTACAATAAAAAATT+TGG | + | chr4.1:44649814-44649833 | None:intergenic | 10.0% |
!! | TAAAAAATTTCTAAATTTGA+TGG | + | chr4.1:44648873-44648892 | None:intergenic | 10.0% |
!! | TGTATATTAATAGAAAAATA+CGG | + | chr4.1:44646740-44646759 | None:intergenic | 10.0% |
!!! | AAAAATTAAACTTGTTTTTT+AGG | - | chr4.1:44651154-44651173 | MS.gene070813:intron | 10.0% |
!!! | AAAATTGTATATTTTCAAAT+GGG | + | chr4.1:44646700-44646719 | None:intergenic | 10.0% |
!!! | TAGATTTTTATGTAATTTTA+CGG | + | chr4.1:44646051-44646070 | None:intergenic | 10.0% |
!!! | TATACACAAATAATTTTTTT+TGG | + | chr4.1:44645727-44645746 | None:intergenic | 10.0% |
!!! | TTTTAGTTAAATATGTTAAT+TGG | + | chr4.1:44646595-44646614 | None:intergenic | 10.0% |
!! | AAATAATTATGTGTTAACTT+TGG | + | chr4.1:44650887-44650906 | None:intergenic | 15.0% |
!! | AAATCACAAAAATATCTTAT+CGG | - | chr4.1:44646222-44646241 | MS.gene070813:intron | 15.0% |
!! | AAGTTATCTTAAATATAAGA+CGG | - | chr4.1:44647510-44647529 | MS.gene070813:intron | 15.0% |
!! | AATTCATGAAATTAATTATG+AGG | - | chr4.1:44647372-44647391 | MS.gene070813:CDS | 15.0% |
!! | ACATAACTAAATGTATAATT+AGG | - | chr4.1:44650470-44650489 | MS.gene070813:intron | 15.0% |
!! | AGAACCAATAAAATAAAATA+TGG | - | chr4.1:44649041-44649060 | MS.gene070813:intron | 15.0% |
!! | AGGTATTTAAAAAATTAACA+TGG | + | chr4.1:44650251-44650270 | None:intergenic | 15.0% |
!! | ATCTTCTTGAATTAAAAAAA+AGG | - | chr4.1:44650417-44650436 | MS.gene070813:intron | 15.0% |
!! | GTTTATTAAATTTGTGTATA+AGG | - | chr4.1:44645695-44645714 | MS.gene070813:CDS | 15.0% |
!! | TCTTCTTGAATTAAAAAAAA+GGG | - | chr4.1:44650418-44650437 | MS.gene070813:intron | 15.0% |
!! | TGAATGAAAATTATAATTAG+TGG | + | chr4.1:44647448-44647467 | None:intergenic | 15.0% |
!! | TTAATTAATTTCAATAAGCA+TGG | + | chr4.1:44649246-44649265 | None:intergenic | 15.0% |
!!! | AACTTTTATGATGTAAATTT+AGG | - | chr4.1:44646528-44646547 | MS.gene070813:CDS | 15.0% |
!!! | AATTTGATGGATATAAATAT+AGG | + | chr4.1:44648860-44648879 | None:intergenic | 15.0% |
!!! | ATATTTTATCCAAAGAATTT+GGG | - | chr4.1:44650157-44650176 | MS.gene070813:intron | 15.0% |
!!! | ATTAATTTGTGTTTTATAAC+AGG | - | chr4.1:44651287-44651306 | MS.gene070813:intron | 15.0% |
!!! | CAAAATTGTATATTTTCAAA+TGG | + | chr4.1:44646701-44646720 | None:intergenic | 15.0% |
!!! | CTATTATTCATTTCAAATTT+TGG | - | chr4.1:44651494-44651513 | MS.gene070813:CDS | 15.0% |
!!! | GTTATATTAGTCTTTTTTTA+AGG | - | chr4.1:44648564-44648583 | MS.gene070813:intron | 15.0% |
!!! | TAATTAAATCAATTTTGTCT+AGG | + | chr4.1:44650496-44650515 | None:intergenic | 15.0% |
!!! | TATTTTATTTTATTGGTTCT+AGG | + | chr4.1:44649041-44649060 | None:intergenic | 15.0% |
!!! | TTAATTTGTGTTTTATAACA+GGG | - | chr4.1:44651288-44651307 | MS.gene070813:intron | 15.0% |
!!! | TTTAGTTTATCTTCTTTAAA+AGG | - | chr4.1:44650014-44650033 | MS.gene070813:intron | 15.0% |
!!! | TTTGTTGTTAATTTGTTTAT+TGG | + | chr4.1:44649579-44649598 | None:intergenic | 15.0% |
!!! | TTTTTTCTAATACACAATTT+TGG | + | chr4.1:44650445-44650464 | None:intergenic | 15.0% |
!! | AATTATTTGTGTATAAGGTA+CGG | - | chr4.1:44645732-44645751 | MS.gene070813:CDS | 20.0% |
!! | AGAAATTGAATAACCTTTAA+AGG | + | chr4.1:44650802-44650821 | None:intergenic | 20.0% |
!! | ATAAAAAGTGATCAAAATTG+TGG | + | chr4.1:44650092-44650111 | None:intergenic | 20.0% |
!! | ATTAAAGGAACACATAATAA+AGG | + | chr4.1:44649849-44649868 | None:intergenic | 20.0% |
!! | CCAATAAAATAAAATATGGT+AGG | - | chr4.1:44649045-44649064 | MS.gene070813:intron | 20.0% |
!! | GTAATTAATGATGATTATGT+TGG | - | chr4.1:44645860-44645879 | MS.gene070813:intron | 20.0% |
!!! | AAAACTCTTAACATTCTTTT+TGG | - | chr4.1:44646023-44646042 | MS.gene070813:intron | 20.0% |
!!! | AATATGTACTTTGAAAATAG+CGG | + | chr4.1:44651341-44651360 | None:intergenic | 20.0% |
!!! | AATGACTACATTCAATTTTT+TGG | - | chr4.1:44646981-44647000 | MS.gene070813:intron | 20.0% |
!!! | ACTTAATAAATTGAGAGTTT+TGG | + | chr4.1:44645830-44645849 | None:intergenic | 20.0% |
!!! | ATTTTCAGAGCAAAATTATA+TGG | - | chr4.1:44649629-44649648 | MS.gene070813:intron | 20.0% |
!!! | CAAGTTTAATTTTTTTTCGT+AGG | + | chr4.1:44651148-44651167 | None:intergenic | 20.0% |
!!! | CATGCAATTTATTTTAGTAA+TGG | + | chr4.1:44646395-44646414 | None:intergenic | 20.0% |
!!! | CCTACCATATTTTATTTTAT+TGG | + | chr4.1:44649048-44649067 | None:intergenic | 20.0% |
!!! | CTTCAAATTGAAATTTTCTT+GGG | + | chr4.1:44648203-44648222 | None:intergenic | 20.0% |
!!! | CTTTTTGAGAATATCATAAT+TGG | - | chr4.1:44647413-44647432 | MS.gene070813:CDS | 20.0% |
!!! | GATATTTTATCCAAAGAATT+TGG | - | chr4.1:44650156-44650175 | MS.gene070813:intron | 20.0% |
!!! | TAATTTGTGTTTTATAACAG+GGG | - | chr4.1:44651289-44651308 | MS.gene070813:intron | 20.0% |
!!! | TTTTCCTCAATAAAAAAAGT+TGG | - | chr4.1:44647540-44647559 | MS.gene070813:intron | 20.0% |
! | AAAACTTTACCCAAATTCTT+TGG | + | chr4.1:44650169-44650188 | None:intergenic | 25.0% |
! | AAAGATGCATATTGGAATTT+AGG | + | chr4.1:44648735-44648754 | None:intergenic | 25.0% |
! | AAGAAGAAAAAAAACCCTAA+TGG | - | chr4.1:44646558-44646577 | MS.gene070813:CDS | 25.0% |
! | AATAATGCATATATATGCAG+GGG | - | chr4.1:44647595-44647614 | MS.gene070813:intron | 25.0% |
! | AATGATTATGACATATAGGT+AGG | + | chr4.1:44650331-44650350 | None:intergenic | 25.0% |
! | AATTTAATATGCTAAGATCC+AGG | + | chr4.1:44651095-44651114 | None:intergenic | 25.0% |
! | AGATAAAGTTTCTTCACATT+TGG | + | chr4.1:44645595-44645614 | None:intergenic | 25.0% |
! | AGGTATGTATAGACATTAAA+AGG | - | chr4.1:44645665-44645684 | MS.gene070813:intron | 25.0% |
! | ATCCTAAAGTATATTTGTGA+TGG | - | chr4.1:44647933-44647952 | MS.gene070813:intron | 25.0% |
! | ATGAATTAGATTAGACAAGT+GGG | + | chr4.1:44647359-44647378 | None:intergenic | 25.0% |
! | ATGAGAGGAGTAAAAAAAAA+AGG | + | chr4.1:44645993-44646012 | None:intergenic | 25.0% |
! | ATGTATCGAAATTAAACTCT+AGG | - | chr4.1:44650945-44650964 | MS.gene070813:intron | 25.0% |
! | CAAAAATATGAAGACCAAAA+GGG | + | chr4.1:44650063-44650082 | None:intergenic | 25.0% |
! | CAAAAATTGTATTAACCTCA+GGG | - | chr4.1:44648487-44648506 | MS.gene070813:intron | 25.0% |
! | CATTTAGTATCAATCAATGT+AGG | - | chr4.1:44649216-44649235 | MS.gene070813:intron | 25.0% |
! | CCAAGAAAATTTCAATTTGA+AGG | - | chr4.1:44648201-44648220 | MS.gene070813:intron | 25.0% |
! | GAATAATGCATATATATGCA+GGG | - | chr4.1:44647594-44647613 | MS.gene070813:intron | 25.0% |
! | GACAAATGATTATGACATAT+AGG | + | chr4.1:44650335-44650354 | None:intergenic | 25.0% |
! | GTAAGTATTTAAAAGTGGTA+GGG | - | chr4.1:44651063-44651082 | MS.gene070813:intron | 25.0% |
! | GTCAAAAAGTTGTTAGAAAA+TGG | - | chr4.1:44647176-44647195 | MS.gene070813:CDS | 25.0% |
! | TAAGATTAGTACACAAAAGA+CGG | + | chr4.1:44646480-44646499 | None:intergenic | 25.0% |
! | TACTTGACCAAAAAAAAAGT+TGG | - | chr4.1:44647683-44647702 | MS.gene070813:CDS | 25.0% |
! | TCAAAAATATGAAGACCAAA+AGG | + | chr4.1:44650064-44650083 | None:intergenic | 25.0% |
! | TCAATTGTGTCAAGTATTAT+GGG | - | chr4.1:44646898-44646917 | MS.gene070813:intron | 25.0% |
! | TGCATCTTAAGATAGTTATT+AGG | - | chr4.1:44648957-44648976 | MS.gene070813:CDS | 25.0% |
! | TGGAAAAATAGAAGTAATTG+AGG | + | chr4.1:44650828-44650847 | None:intergenic | 25.0% |
! | TGTAGCAGTCTATTTATTAT+AGG | - | chr4.1:44646955-44646974 | MS.gene070813:intron | 25.0% |
! | TGTATCGAAATTAAACTCTA+GGG | - | chr4.1:44650946-44650965 | MS.gene070813:intron | 25.0% |
! | TTAATAGATAACGAGTACAA+CGG | + | chr4.1:44650981-44651000 | None:intergenic | 25.0% |
! | TTAATTGTTGCATATGGTAA+AGG | - | chr4.1:44649934-44649953 | MS.gene070813:intron | 25.0% |
! | TTTGAAAAGCTCTCATTTAT+CGG | - | chr4.1:44648676-44648695 | MS.gene070813:intron | 25.0% |
!! | CCTTCAAATTGAAATTTTCT+TGG | + | chr4.1:44648204-44648223 | None:intergenic | 25.0% |
!! | GCTATTCATATTTTCCAATA+CGG | + | chr4.1:44650746-44650765 | None:intergenic | 25.0% |
!! | GTGTATATTTGTAGTTTTTG+TGG | - | chr4.1:44645549-44645568 | MS.gene070813:intron | 25.0% |
!! | GTTTAATTTCGATACATTGT+CGG | + | chr4.1:44650942-44650961 | None:intergenic | 25.0% |
!! | TTGATTTTCTCTCTTTTGAT+TGG | - | chr4.1:44647083-44647102 | MS.gene070813:intron | 25.0% |
!!! | ACTTCCAACTTTTTTTATTG+AGG | + | chr4.1:44647547-44647566 | None:intergenic | 25.0% |
!!! | AGATGAATTTTTCAATTACG+TGG | - | chr4.1:44648896-44648915 | MS.gene070813:CDS | 25.0% |
!!! | AGTTGATATTATTACCCTTT+TGG | - | chr4.1:44650046-44650065 | MS.gene070813:intron | 25.0% |
!!! | GAACGGTAACAATTTTTTAT+AGG | + | chr4.1:44647282-44647301 | None:intergenic | 25.0% |
!!! | GCATTTTCCAACTTTTTTTT+TGG | + | chr4.1:44647693-44647712 | None:intergenic | 25.0% |
!!! | GTTTTCTGTTAGTTTATTGT+AGG | + | chr4.1:44650229-44650248 | None:intergenic | 25.0% |
!!! | TTGGGTAAAGTTTTGATAAT+AGG | - | chr4.1:44650175-44650194 | MS.gene070813:intron | 25.0% |
AAAATAGCAGTTTAAACGGT+TGG | - | chr4.1:44647311-44647330 | MS.gene070813:intron | 30.0% | |
AAAATTGCCATGAAGGATTT+GGG | - | chr4.1:44649455-44649474 | MS.gene070813:intron | 30.0% | |
AAATACGGTCAAAGTAAGTT+AGG | + | chr4.1:44646725-44646744 | None:intergenic | 30.0% | |
AAATTGCTGAAGGAAAATCA+TGG | - | chr4.1:44648121-44648140 | MS.gene070813:intron | 30.0% | |
AACGAATGTACATGTATCTT+TGG | + | chr4.1:44650771-44650790 | None:intergenic | 30.0% | |
AGAATATCATAATTGGTGAG+TGG | - | chr4.1:44647420-44647439 | MS.gene070813:CDS | 30.0% | |
ATATGTCTTTACAAAGGCAA+TGG | - | chr4.1:44649664-44649683 | MS.gene070813:intron | 30.0% | |
CAACAACTAACTTTGATGAA+AGG | - | chr4.1:44648281-44648300 | MS.gene070813:intron | 30.0% | |
CACCATCACAAATATACTTT+AGG | + | chr4.1:44647938-44647957 | None:intergenic | 30.0% | |
CATGAATTAGATTAGACAAG+TGG | + | chr4.1:44647360-44647379 | None:intergenic | 30.0% | |
CCAAAAATTGTATTAACCTC+AGG | - | chr4.1:44648486-44648505 | MS.gene070813:intron | 30.0% | |
CGTAAGTATTTAAAAGTGGT+AGG | - | chr4.1:44651062-44651081 | MS.gene070813:intron | 30.0% | |
CTTGTCTATTACTCCATTTA+AGG | + | chr4.1:44649136-44649155 | None:intergenic | 30.0% | |
GAATACCACAAAAGTTTAGT+TGG | - | chr4.1:44649177-44649196 | MS.gene070813:intron | 30.0% | |
GACAGTTTAATTGTTGCATA+TGG | - | chr4.1:44649928-44649947 | MS.gene070813:intron | 30.0% | |
GCAACGTAAGTATTTAAAAG+TGG | - | chr4.1:44651058-44651077 | MS.gene070813:intron | 30.0% | |
GCATTGGGTTTAAATACATT+TGG | - | chr4.1:44648440-44648459 | MS.gene070813:intron | 30.0% | |
GGAATAATGCATATATATGC+AGG | - | chr4.1:44647593-44647612 | MS.gene070813:intron | 30.0% | |
GTACTATAAGTGAGTAAAGA+TGG | - | chr4.1:44645933-44645952 | MS.gene070813:intron | 30.0% | |
GTATAACTCTTGAAGTAGAT+TGG | + | chr4.1:44648230-44648249 | None:intergenic | 30.0% | |
GTCAATTGTGTCAAGTATTA+TGG | - | chr4.1:44646897-44646916 | MS.gene070813:intron | 30.0% | |
GTGATATTTGTACAACTCTT+TGG | - | chr4.1:44647041-44647060 | MS.gene070813:intron | 30.0% | |
TAAAATTGCCATGAAGGATT+TGG | - | chr4.1:44649454-44649473 | MS.gene070813:intron | 30.0% | |
TAATAGATAACGAGTACAAC+GGG | + | chr4.1:44650980-44650999 | None:intergenic | 30.0% | |
TATGTCTTTACAAAGGCAAT+GGG | - | chr4.1:44649665-44649684 | MS.gene070813:intron | 30.0% | |
TCACAAAAATATCTTATCGG+TGG | - | chr4.1:44646225-44646244 | MS.gene070813:intron | 30.0% | |
TCACCTTAAAAGTGAATAAG+TGG | + | chr4.1:44647644-44647663 | None:intergenic | 30.0% | |
TCAGAGCAAAATTATATGGT+TGG | - | chr4.1:44649633-44649652 | MS.gene070813:intron | 30.0% | |
TGACCCAAAAATGATTAACT+GGG | - | chr4.1:44651679-44651698 | MS.gene070813:CDS | 30.0% | |
TGATATATGCTATCATCACA+AGG | + | chr4.1:44650601-44650620 | None:intergenic | 30.0% | |
TGCAACAATTAAACTGTCTA+TGG | + | chr4.1:44649926-44649945 | None:intergenic | 30.0% | |
TGTGTCTTGAAAAATTCTTG+AGG | + | chr4.1:44647735-44647754 | None:intergenic | 30.0% | |
TTAAATGTAGCATACGTATG+TGG | - | chr4.1:44649284-44649303 | MS.gene070813:intron | 30.0% | |
TTATGTTGGTATCTTAAGTG+TGG | - | chr4.1:44645874-44645893 | MS.gene070813:intron | 30.0% | |
TTCATGAACATTCATATTCC+TGG | - | chr4.1:44651710-44651729 | MS.gene070813:CDS | 30.0% | |
TTGACCCAAAAATGATTAAC+TGG | - | chr4.1:44651678-44651697 | MS.gene070813:CDS | 30.0% | |
TTTATTGTAGGAGATGATGT+TGG | + | chr4.1:44650217-44650236 | None:intergenic | 30.0% | |
TTTCGTAGGTACAATTCATA+CGG | + | chr4.1:44651134-44651153 | None:intergenic | 30.0% | |
! | AGAGCTTTTCAAACAATCTT+GGG | + | chr4.1:44648669-44648688 | None:intergenic | 30.0% |
! | ATAGTGGAAAAGATGCATAT+TGG | + | chr4.1:44648743-44648762 | None:intergenic | 30.0% |
! | ATATTTTACTTGCACGTCAT+TGG | - | chr4.1:44650361-44650380 | MS.gene070813:intron | 30.0% |
! | ATCGGAAAGATAGTTTTTGA+TGG | - | chr4.1:44648694-44648713 | MS.gene070813:intron | 30.0% |
! | ATGCATTGACATGCTTAATA+AGG | - | chr4.1:44646875-44646894 | MS.gene070813:intron | 30.0% |
! | CCTGAGGTTAATACAATTTT+TGG | + | chr4.1:44648489-44648508 | None:intergenic | 30.0% |
! | CTACAGCTTCAGATATTTTA+CGG | - | chr4.1:44650669-44650688 | MS.gene070813:intron | 30.0% |
! | GAAAAATAGTTTGTCAGAAG+TGG | + | chr4.1:44648984-44649003 | None:intergenic | 30.0% |
! | GAATGTTAAGAGTTTTCTCT+TGG | + | chr4.1:44646019-44646038 | None:intergenic | 30.0% |
! | TCATATGTAGATTTTGCGAA+AGG | - | chr4.1:44648090-44648109 | MS.gene070813:intron | 30.0% |
! | TCTTTTCCACTATAATCTCT+CGG | - | chr4.1:44648750-44648769 | MS.gene070813:intron | 30.0% |
!! | ACTCCACTTATTCACTTTTA+AGG | - | chr4.1:44647638-44647657 | MS.gene070813:CDS | 30.0% |
!! | AGTCAATTGTTTTGCATGAA+TGG | + | chr4.1:44650848-44650867 | None:intergenic | 30.0% |
!! | CTATTTTTCGCAATTCAATG+TGG | - | chr4.1:44648995-44649014 | MS.gene070813:CDS | 30.0% |
!! | GAAATTAAACTCTAGGGTTT+GGG | - | chr4.1:44650952-44650971 | MS.gene070813:intron | 30.0% |
!! | TAGTTGGTGAACTTAATATG+TGG | - | chr4.1:44649193-44649212 | MS.gene070813:intron | 30.0% |
!! | TTATCTTCTTTTGAGAGCTA+CGG | - | chr4.1:44645609-44645628 | MS.gene070813:intron | 30.0% |
!! | TTTTTGAGCTTGAGCAATAT+AGG | - | chr4.1:44648810-44648829 | MS.gene070813:intron | 30.0% |
!!! | AACGTCACACTTTTTTGAAA+TGG | - | chr4.1:44650387-44650406 | MS.gene070813:intron | 30.0% |
!!! | ACCGTTTAAACTGCTATTTT+CGG | + | chr4.1:44647311-44647330 | None:intergenic | 30.0% |
!!! | ACGTCACACTTTTTTGAAAT+GGG | - | chr4.1:44650388-44650407 | MS.gene070813:intron | 30.0% |
!!! | AGAATTTTTCAAGACACATG+TGG | - | chr4.1:44647737-44647756 | MS.gene070813:CDS | 30.0% |
!!! | ATATTTTGATATCAGCAGGA+AGG | - | chr4.1:44651356-44651375 | MS.gene070813:intron | 30.0% |
!!! | CATAAGAATGTTTTGGTACT+TGG | - | chr4.1:44645400-44645419 | MS.gene070813:CDS | 30.0% |
!!! | GTACATATTTTGATATCAGC+AGG | - | chr4.1:44651352-44651371 | MS.gene070813:intron | 30.0% |
AAACACAAGGACAAAAAGAG+AGG | + | chr4.1:44645780-44645799 | None:intergenic | 35.0% | |
AAAGAGAGTTACTCTTTGCA+AGG | + | chr4.1:44645438-44645457 | None:intergenic | 35.0% | |
AACACAAGGACAAAAAGAGA+GGG | + | chr4.1:44645779-44645798 | None:intergenic | 35.0% | |
AAGGAATATTTGACAATGCC+AGG | + | chr4.1:44651731-44651750 | None:intergenic | 35.0% | |
AATACAAACCTGTTGATACG+TGG | + | chr4.1:44648520-44648539 | None:intergenic | 35.0% | |
ACTATAATCTCTCGGATTCT+AGG | - | chr4.1:44648758-44648777 | MS.gene070813:intron | 35.0% | |
ACTGCAACACATACCTTAAA+TGG | - | chr4.1:44649120-44649139 | MS.gene070813:intron | 35.0% | |
AGGTATGTGTTGCAGTATTA+TGG | + | chr4.1:44649116-44649135 | None:intergenic | 35.0% | |
ATGCAGATATGATGTAGCAT+TGG | - | chr4.1:44648424-44648443 | MS.gene070813:intron | 35.0% | |
ATGTCTCATGAAGAAACACA+AGG | + | chr4.1:44645793-44645812 | None:intergenic | 35.0% | |
ATTGAACATGCTTCAACAAG+AGG | - | chr4.1:44649412-44649431 | MS.gene070813:intron | 35.0% | |
CATTTAGTGAAACACCAAGT+TGG | + | chr4.1:44649343-44649362 | None:intergenic | 35.0% | |
CCAAAACATTCTTATGCTCA+AGG | + | chr4.1:44645396-44645415 | None:intergenic | 35.0% | |
CCCGAAAATAGCAGTTTAAA+CGG | - | chr4.1:44647307-44647326 | MS.gene070813:intron | 35.0% | |
CTACAAGTGTACAAGAAAAG+TGG | - | chr4.1:44648933-44648952 | MS.gene070813:CDS | 35.0% | |
GATGATAGCATATATCACGT+GGG | - | chr4.1:44650604-44650623 | MS.gene070813:intron | 35.0% | |
GATTATGACATATAGGTAGG+TGG | + | chr4.1:44650328-44650347 | None:intergenic | 35.0% | |
GGATACTAAAATTGCCATGA+AGG | - | chr4.1:44649448-44649467 | MS.gene070813:intron | 35.0% | |
TAGAATCCGAGAGATTATAG+TGG | + | chr4.1:44648759-44648778 | None:intergenic | 35.0% | |
TAGGTGGATGGGTATATTAT+AGG | + | chr4.1:44650312-44650331 | None:intergenic | 35.0% | |
TCATGCATATGCTCTTTCTT+TGG | - | chr4.1:44646312-44646331 | MS.gene070813:intron | 35.0% | |
TCCAAATCTACTGTTGTTGT+CGG | - | chr4.1:44646254-44646273 | MS.gene070813:intron | 35.0% | |
TCGTTACTTGCTTCCTTTAA+AGG | - | chr4.1:44650786-44650805 | MS.gene070813:intron | 35.0% | |
TGATGATAGCATATATCACG+TGG | - | chr4.1:44650603-44650622 | MS.gene070813:intron | 35.0% | |
TGCAGATATGATGTAGCATT+GGG | - | chr4.1:44648425-44648444 | MS.gene070813:intron | 35.0% | |
TGTAGGTCTCACAATAACAA+TGG | + | chr4.1:44649726-44649745 | None:intergenic | 35.0% | |
TTATGGTCATATGTTGAGCT+TGG | + | chr4.1:44649099-44649118 | None:intergenic | 35.0% | |
TTCAAATGGGTCATCTATTG+CGG | + | chr4.1:44646687-44646706 | None:intergenic | 35.0% | |
TTGAACATGCTTCAACAAGA+GGG | - | chr4.1:44649413-44649432 | MS.gene070813:intron | 35.0% | |
TTGTGTCAAGTATTATGGGA+TGG | - | chr4.1:44646902-44646921 | MS.gene070813:intron | 35.0% | |
! | ATGCTCTTTCTTTGGTAACA+TGG | - | chr4.1:44646320-44646339 | MS.gene070813:CDS | 35.0% |
! | ATGGAGGGAGTAACATTTTA+AGG | - | chr4.1:44646921-44646940 | MS.gene070813:intron | 35.0% |
! | CCTTGAGCATAAGAATGTTT+TGG | - | chr4.1:44645393-44645412 | MS.gene070813:CDS | 35.0% |
! | GAGAGCTTTTCAAACAATCT+TGG | + | chr4.1:44648670-44648689 | None:intergenic | 35.0% |
! | GTTCACCAACTAAACTTTTG+TGG | + | chr4.1:44649185-44649204 | None:intergenic | 35.0% |
! | TCCTCCCAGTTAATCATTTT+TGG | + | chr4.1:44651686-44651705 | None:intergenic | 35.0% |
!! | CAACTTGGTGTTTCACTAAA+TGG | - | chr4.1:44649341-44649360 | MS.gene070813:intron | 35.0% |
!! | CCTCCCAGTTAATCATTTTT+GGG | + | chr4.1:44651685-44651704 | None:intergenic | 35.0% |
!! | CGAAATTAAACTCTAGGGTT+TGG | - | chr4.1:44650951-44650970 | MS.gene070813:intron | 35.0% |
!! | GTACACAAAAGACGGATTTT+TGG | + | chr4.1:44646472-44646491 | None:intergenic | 35.0% |
!! | TAAGTGCTGGTAATGATTGT+AGG | + | chr4.1:44649743-44649762 | None:intergenic | 35.0% |
!! | TGGTGTCTTTTTCACCATTA+GGG | + | chr4.1:44646575-44646594 | None:intergenic | 35.0% |
!! | TTGGTGTCTTTTTCACCATT+AGG | + | chr4.1:44646576-44646595 | None:intergenic | 35.0% |
!! | TTTTTGGTCAAGTAGCCTAT+CGG | + | chr4.1:44647677-44647696 | None:intergenic | 35.0% |
!!! | AAACCATGTTTTGACAAGGA+AGG | - | chr4.1:44650694-44650713 | MS.gene070813:intron | 35.0% |
!!! | CCGTTTAAACTGCTATTTTC+GGG | + | chr4.1:44647310-44647329 | None:intergenic | 35.0% |
!!! | CGTCACACTTTTTTGAAATG+GGG | - | chr4.1:44650389-44650408 | MS.gene070813:intron | 35.0% |
AAAAAGTGACTCTAGTGCCT+GGG | - | chr4.1:44648170-44648189 | MS.gene070813:intron | 40.0% | |
AAGACAAAGTGGAGTAGAGA+TGG | - | chr4.1:44651643-44651662 | MS.gene070813:intron | 40.0% | |
AATGCTAGTGGGAACTATGA+AGG | - | chr4.1:44649691-44649710 | MS.gene070813:intron | 40.0% | |
ACCGACAACAACAGTAGATT+TGG | + | chr4.1:44646258-44646277 | None:intergenic | 40.0% | |
ACGCCATTGAAGAACACATA+GGG | + | chr4.1:44651417-44651436 | None:intergenic | 40.0% | |
ACTTACAAAGAACCTTTCCC+TGG | - | chr4.1:44649758-44649777 | MS.gene070813:intron | 40.0% | |
AGTTGGCAAAGTTACCGTAT+TGG | - | chr4.1:44650729-44650748 | MS.gene070813:intron | 40.0% | |
ATGACATATAGGTAGGTGGA+TGG | + | chr4.1:44650324-44650343 | None:intergenic | 40.0% | |
ATGCATATATATGCAGGGGT+CGG | - | chr4.1:44647599-44647618 | MS.gene070813:intron | 40.0% | |
CAAATAGCAGCAAGACAAAG+TGG | - | chr4.1:44651632-44651651 | MS.gene070813:intron | 40.0% | |
CCCAAAAATGATTAACTGGG+AGG | - | chr4.1:44651682-44651701 | MS.gene070813:CDS | 40.0% | |
CTAAGACTCTCATATCTCAC+TGG | + | chr4.1:44650646-44650665 | None:intergenic | 40.0% | |
CTCACCAATGTCATGTAGAA+CGG | - | chr4.1:44646285-44646304 | MS.gene070813:intron | 40.0% | |
CTTCCTTCCTTGTCAAAACA+TGG | + | chr4.1:44650700-44650719 | None:intergenic | 40.0% | |
GAAAGGTTCTTTGTAAGTGC+TGG | + | chr4.1:44649756-44649775 | None:intergenic | 40.0% | |
GAGGTGGGTGTGAAAATTAA+TGG | + | chr4.1:44647985-44648004 | None:intergenic | 40.0% | |
GCACTATTTGCCACAATTCA+AGG | + | chr4.1:44647816-44647835 | None:intergenic | 40.0% | |
GGCAAATAGTGCATTGTGAT+TGG | - | chr4.1:44647824-44647843 | MS.gene070813:intron | 40.0% | |
GGTAAATATCTCACGTTGGA+TGG | - | chr4.1:44645895-44645914 | MS.gene070813:intron | 40.0% | |
GGTAACTTTGCCAACTTTGA+TGG | + | chr4.1:44650725-44650744 | None:intergenic | 40.0% | |
GGTTAATCTTACGTGCTAGT+AGG | + | chr4.1:44649071-44649090 | None:intergenic | 40.0% | |
GTCAAGTATTATGGGATGGA+GGG | - | chr4.1:44646906-44646925 | MS.gene070813:intron | 40.0% | |
GTGTGGTAAATATCTCACGT+TGG | - | chr4.1:44645891-44645910 | MS.gene070813:intron | 40.0% | |
GTTTCACTAAATGGAGTGCA+AGG | - | chr4.1:44649350-44649369 | MS.gene070813:intron | 40.0% | |
TGAAGGATTTGGGAATGGAA+AGG | - | chr4.1:44649465-44649484 | MS.gene070813:intron | 40.0% | |
TGACATATAGGTAGGTGGAT+GGG | + | chr4.1:44650323-44650342 | None:intergenic | 40.0% | |
TGAGGAAAAGAGAGTAGTTG+AGG | - | chr4.1:44649385-44649404 | MS.gene070813:intron | 40.0% | |
TGTCAAGTATTATGGGATGG+AGG | - | chr4.1:44646905-44646924 | MS.gene070813:intron | 40.0% | |
TGTGGCTGAAAAATAGGAAG+TGG | + | chr4.1:44647790-44647809 | None:intergenic | 40.0% | |
TTAAGCGTATACCCGCAAAA+CGG | - | chr4.1:44651031-44651050 | MS.gene070813:intron | 40.0% | |
TTCCATTCCCAAATCCTTCA+TGG | + | chr4.1:44649465-44649484 | None:intergenic | 40.0% | |
! | AAAGTGGTAGGGTTTTTACC+TGG | - | chr4.1:44651074-44651093 | MS.gene070813:intron | 40.0% |
! | AAGTGAATAAGTGGAGTGTC+CGG | + | chr4.1:44647635-44647654 | None:intergenic | 40.0% |
! | AGGAAGTGTGGCTGAAAAAT+AGG | + | chr4.1:44647796-44647815 | None:intergenic | 40.0% |
! | CAGTTTTTGATGTGGTGAGA+AGG | - | chr4.1:44649989-44650008 | MS.gene070813:intron | 40.0% |
! | CATATGTTGAGCTTGGTTCT+AGG | + | chr4.1:44649092-44649111 | None:intergenic | 40.0% |
! | CTTAGAGGCAGTTTTTGATG+TGG | - | chr4.1:44649981-44650000 | MS.gene070813:intron | 40.0% |
! | GGACTTGTTCAAATTGCTGA+AGG | - | chr4.1:44648111-44648130 | MS.gene070813:intron | 40.0% |
! | GTTTTCTCTTGGATCATGAG+AGG | + | chr4.1:44646008-44646027 | None:intergenic | 40.0% |
!! | AGTGAAACACCAAGTTGGTA+TGG | + | chr4.1:44649338-44649357 | None:intergenic | 40.0% |
!! | GCTATTTTCGGGAAGATGAA+CGG | + | chr4.1:44647299-44647318 | None:intergenic | 40.0% |
!! | TTGATTTGCATGACTCACCA+TGG | + | chr4.1:44650578-44650597 | None:intergenic | 40.0% |
!!! | CTCGGATTCTAGGTTTTGTT+AGG | - | chr4.1:44648768-44648787 | MS.gene070813:intron | 40.0% |
!!! | GGCAAAACCATGTTTTGACA+AGG | - | chr4.1:44650690-44650709 | MS.gene070813:intron | 40.0% |
AAAAGTGACTCTAGTGCCTG+GGG | - | chr4.1:44648171-44648190 | MS.gene070813:intron | 45.0% | |
AAACTGCCTCTAAGTCTGCA+AGG | + | chr4.1:44649975-44649994 | None:intergenic | 45.0% | |
ACAAAGAACCTTTCCCTGGT+TGG | - | chr4.1:44649762-44649781 | MS.gene070813:intron | 45.0% | |
ACAAGAGGGAGCTACTGAAA+AGG | - | chr4.1:44649427-44649446 | MS.gene070813:intron | 45.0% | |
ACCAATGTCATGTAGAACGG+TGG | - | chr4.1:44646288-44646307 | MS.gene070813:intron | 45.0% | |
AGCCACACTTCCTTGAATTG+TGG | - | chr4.1:44647803-44647822 | MS.gene070813:CDS | 45.0% | |
AGGCCCTATGTGTTCTTCAA+TGG | - | chr4.1:44651411-44651430 | MS.gene070813:intron | 45.0% | |
ATCACGTGGGTTCATCTGTT+GGG | - | chr4.1:44650617-44650636 | MS.gene070813:intron | 45.0% | |
ATGCTTCCTTGCAGACTTAG+AGG | - | chr4.1:44649966-44649985 | MS.gene070813:intron | 45.0% | |
ATGGGTCATCTATTGCGGAA+CGG | + | chr4.1:44646682-44646701 | None:intergenic | 45.0% | |
CAAAGAACCTTTCCCTGGTT+GGG | - | chr4.1:44649763-44649782 | MS.gene070813:intron | 45.0% | |
CACGCCATTGAAGAACACAT+AGG | + | chr4.1:44651418-44651437 | None:intergenic | 45.0% | |
CACTAGAAGACTGCACAATG+AGG | - | chr4.1:44645645-44645664 | MS.gene070813:intron | 45.0% | |
CATTCACCACCATATCAGCA+GGG | + | chr4.1:44650543-44650562 | None:intergenic | 45.0% | |
CGTTCTACATGACATTGGTG+AGG | + | chr4.1:44646287-44646306 | None:intergenic | 45.0% | |
GAAAAAGTGACTCTAGTGCC+TGG | - | chr4.1:44648169-44648188 | MS.gene070813:intron | 45.0% | |
GAAGGAAGAGCCATCAAAGT+TGG | - | chr4.1:44650712-44650731 | MS.gene070813:intron | 45.0% | |
GCAAGGACTAGACATTGATG+AGG | - | chr4.1:44649367-44649386 | MS.gene070813:intron | 45.0% | |
GCAATGGGAGAAATGCTAGT+GGG | - | chr4.1:44649680-44649699 | MS.gene070813:intron | 45.0% | |
GGTGAATTTCTCTAGCCGAT+AGG | - | chr4.1:44647659-44647678 | MS.gene070813:CDS | 45.0% | |
GTAGAGGATCCATACCAACT+TGG | - | chr4.1:44649326-44649345 | MS.gene070813:intron | 45.0% | |
GTGACAAACGTTACGTCTCT+TGG | - | chr4.1:44646185-44646204 | MS.gene070813:intron | 45.0% | |
TACCAAGTGAGCTAAGCTCA+CGG | + | chr4.1:44647572-44647591 | None:intergenic | 45.0% | |
TATCACGTGGGTTCATCTGT+TGG | - | chr4.1:44650616-44650635 | MS.gene070813:intron | 45.0% | |
TCCACCGTTCTACATGACAT+TGG | + | chr4.1:44646292-44646311 | None:intergenic | 45.0% | |
TGAGCTTAGCTCACTTGGTA+AGG | - | chr4.1:44647572-44647591 | MS.gene070813:intron | 45.0% | |
TGCATATATATGCAGGGGTC+GGG | - | chr4.1:44647600-44647619 | MS.gene070813:intron | 45.0% | |
TGCCACAATTCAAGGAAGTG+TGG | + | chr4.1:44647808-44647827 | None:intergenic | 45.0% | |
TGCCATGAAGGATTTGGGAA+TGG | - | chr4.1:44649460-44649479 | MS.gene070813:intron | 45.0% | |
! | AGTGAATAAGTGGAGTGTCC+GGG | + | chr4.1:44647634-44647653 | None:intergenic | 45.0% |
! | TACGTTGCAAGTCCGTTTTG+CGG | + | chr4.1:44651046-44651065 | None:intergenic | 45.0% |
! | TGCGGTTGGTTGAACTTTAC+AGG | - | chr4.1:44651391-44651410 | MS.gene070813:intron | 45.0% |
! | TTTTCTTGGGAAATGTCCCC+AGG | + | chr4.1:44648190-44648209 | None:intergenic | 45.0% |
!! | TAATAATTAAAGAAAATTAA+AGG | + | chr4.1:44649864-44649883 | None:intergenic | 5.0% |
!!! | AAAAATATTAATATGATTTT+TGG | - | chr4.1:44650272-44650291 | MS.gene070813:intron | 5.0% |
!!! | AAATCATATTAATATTTTTT+AGG | + | chr4.1:44650271-44650290 | None:intergenic | 5.0% |
AAGATGGTGTCCACCCTTGT+CGG | - | chr4.1:44645949-44645968 | MS.gene070813:intron | 50.0% | |
ACCAAGTGAGCTAAGCTCAC+GGG | + | chr4.1:44647571-44647590 | None:intergenic | 50.0% | |
ATACCGAGAGTAACCCGACA+AGG | + | chr4.1:44645966-44645985 | None:intergenic | 50.0% | |
CAACCAACCGCATCACAGTA+TGG | + | chr4.1:44651383-44651402 | None:intergenic | 50.0% | |
GAAGCAGATCCCTGCTGATA+TGG | - | chr4.1:44650531-44650550 | MS.gene070813:intron | 50.0% | |
GAATGCAATGCTAGTGGCCA+TGG | - | chr4.1:44650558-44650577 | MS.gene070813:intron | 50.0% | |
GAGAGGAGGACTGATAGTAG+AGG | - | chr4.1:44649310-44649329 | MS.gene070813:intron | 50.0% | |
GCATACGTATGTGGAGAGAG+AGG | - | chr4.1:44649293-44649312 | MS.gene070813:intron | 50.0% | |
GCATATATATGCAGGGGTCG+GGG | - | chr4.1:44647601-44647620 | MS.gene070813:intron | 50.0% | |
GCATTCACCACCATATCAGC+AGG | + | chr4.1:44650544-44650563 | None:intergenic | 50.0% | |
GGAAGGTCCATACTGTGATG+CGG | - | chr4.1:44651373-44651392 | MS.gene070813:intron | 50.0% | |
GGCAATGGGAGAAATGCTAG+TGG | - | chr4.1:44649679-44649698 | MS.gene070813:intron | 50.0% | |
GGTGGTGAATGCAATGCTAG+TGG | - | chr4.1:44650552-44650571 | MS.gene070813:intron | 50.0% | |
GTCATCTATTGCGGAACGGA+TGG | + | chr4.1:44646678-44646697 | None:intergenic | 50.0% | |
GTGCTTGTCCACGTATCAAC+AGG | - | chr4.1:44648509-44648528 | MS.gene070813:intron | 50.0% | |
TACCGAGAGTAACCCGACAA+GGG | + | chr4.1:44645965-44645984 | None:intergenic | 50.0% | |
TACGTATGTGGAGAGAGAGG+AGG | - | chr4.1:44649296-44649315 | MS.gene070813:intron | 50.0% | |
TTACTCCTTCGACCCAACCA+GGG | + | chr4.1:44649778-44649797 | None:intergenic | 50.0% | |
! | ACGTTGCAAGTCCGTTTTGC+GGG | + | chr4.1:44651045-44651064 | None:intergenic | 50.0% |
! | ATTTTCACACCCACCTCACG+TGG | - | chr4.1:44647988-44648007 | MS.gene070813:intron | 50.0% |
! | GTGAATAAGTGGAGTGTCCG+GGG | + | chr4.1:44647633-44647652 | None:intergenic | 50.0% |
! | TTTTCACACCCACCTCACGT+GGG | - | chr4.1:44647989-44648008 | MS.gene070813:intron | 50.0% |
!!! | GTTTTGGTACTTGGTGCTGC+TGG | - | chr4.1:44645409-44645428 | MS.gene070813:CDS | 50.0% |
AGATGGTGTCCACCCTTGTC+GGG | - | chr4.1:44645950-44645969 | MS.gene070813:intron | 55.0% | |
ATACGTGGACAAGCACCCTG+AGG | + | chr4.1:44648505-44648524 | None:intergenic | 55.0% | |
CACCCTTGTCGGGTTACTCT+CGG | - | chr4.1:44645960-44645979 | MS.gene070813:intron | 55.0% | |
CCAAGTGAGCTAAGCTCACG+GGG | + | chr4.1:44647570-44647589 | None:intergenic | 55.0% | |
CTGGTTGGGTCGAAGGAGTA+AGG | - | chr4.1:44649777-44649796 | MS.gene070813:intron | 55.0% | |
CTTACTCCTTCGACCCAACC+AGG | + | chr4.1:44649779-44649798 | None:intergenic | 55.0% | |
GCAGATCCCTGCTGATATGG+TGG | - | chr4.1:44650534-44650553 | MS.gene070813:intron | 55.0% | |
GGTCCATACTGTGATGCGGT+TGG | - | chr4.1:44651377-44651396 | MS.gene070813:intron | 55.0% | |
TTTCACACCCACCTCACGTG+GGG | - | chr4.1:44647990-44648009 | MS.gene070813:intron | 55.0% | |
CCCCGTGAGCTTAGCTCACT+TGG | - | chr4.1:44647567-44647586 | MS.gene070813:intron | 60.0% | |
CCTTCGACCCAACCAGGGAA+AGG | + | chr4.1:44649773-44649792 | None:intergenic | 60.0% | |
CCTTTCCCTGGTTGGGTCGA+AGG | - | chr4.1:44649770-44649789 | MS.gene070813:intron | 60.0% | |
CGAGAGTAACCCGACAAGGG+TGG | + | chr4.1:44645962-44645981 | None:intergenic | 60.0% | |
CAAGCCTCCCCACGTGAGGT+GGG | + | chr4.1:44648000-44648019 | None:intergenic | 65.0% | |
TAGCCAAGCCTCCCCACGTG+AGG | + | chr4.1:44648004-44648023 | None:intergenic | 65.0% | |
AGGGGTCGGGGTTCGAACCC+CGG | - | chr4.1:44647613-44647632 | MS.gene070813:intron | 70.0% | |
CACACCCACCTCACGTGGGG+AGG | - | chr4.1:44647993-44648012 | MS.gene070813:intron | 70.0% | |
CCAAGCCTCCCCACGTGAGG+TGG | + | chr4.1:44648001-44648020 | None:intergenic | 70.0% | |
CCACCTCACGTGGGGAGGCT+TGG | - | chr4.1:44647998-44648017 | MS.gene070813:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 44645364 | 44651757 | 44645364 | ID=MS.gene070813 |
chr4.1 | mRNA | 44645364 | 44651757 | 44645364 | ID=MS.gene070813.t1;Parent=MS.gene070813 |
chr4.1 | exon | 44651676 | 44651757 | 44651676 | ID=MS.gene070813.t1.exon1;Parent=MS.gene070813.t1 |
chr4.1 | CDS | 44651676 | 44651757 | 44651676 | ID=cds.MS.gene070813.t1;Parent=MS.gene070813.t1 |
chr4.1 | exon | 44651455 | 44651558 | 44651455 | ID=MS.gene070813.t1.exon2;Parent=MS.gene070813.t1 |
chr4.1 | CDS | 44651455 | 44651558 | 44651455 | ID=cds.MS.gene070813.t1;Parent=MS.gene070813.t1 |
chr4.1 | exon | 44648819 | 44649021 | 44648819 | ID=MS.gene070813.t1.exon3;Parent=MS.gene070813.t1 |
chr4.1 | CDS | 44648819 | 44649021 | 44648819 | ID=cds.MS.gene070813.t1;Parent=MS.gene070813.t1 |
chr4.1 | exon | 44648591 | 44648691 | 44648591 | ID=MS.gene070813.t1.exon4;Parent=MS.gene070813.t1 |
chr4.1 | CDS | 44648591 | 44648691 | 44648591 | ID=cds.MS.gene070813.t1;Parent=MS.gene070813.t1 |
chr4.1 | exon | 44647635 | 44647827 | 44647635 | ID=MS.gene070813.t1.exon5;Parent=MS.gene070813.t1 |
chr4.1 | CDS | 44647635 | 44647827 | 44647635 | ID=cds.MS.gene070813.t1;Parent=MS.gene070813.t1 |
chr4.1 | exon | 44647323 | 44647484 | 44647323 | ID=MS.gene070813.t1.exon6;Parent=MS.gene070813.t1 |
chr4.1 | CDS | 44647323 | 44647484 | 44647323 | ID=cds.MS.gene070813.t1;Parent=MS.gene070813.t1 |
chr4.1 | exon | 44647119 | 44647200 | 44647119 | ID=MS.gene070813.t1.exon7;Parent=MS.gene070813.t1 |
chr4.1 | CDS | 44647119 | 44647200 | 44647119 | ID=cds.MS.gene070813.t1;Parent=MS.gene070813.t1 |
chr4.1 | exon | 44646314 | 44646583 | 44646314 | ID=MS.gene070813.t1.exon8;Parent=MS.gene070813.t1 |
chr4.1 | CDS | 44646314 | 44646583 | 44646314 | ID=cds.MS.gene070813.t1;Parent=MS.gene070813.t1 |
chr4.1 | exon | 44645685 | 44645812 | 44645685 | ID=MS.gene070813.t1.exon9;Parent=MS.gene070813.t1 |
chr4.1 | CDS | 44645685 | 44645812 | 44645685 | ID=cds.MS.gene070813.t1;Parent=MS.gene070813.t1 |
chr4.1 | exon | 44645364 | 44645517 | 44645364 | ID=MS.gene070813.t1.exon10;Parent=MS.gene070813.t1 |
chr4.1 | CDS | 44645364 | 44645517 | 44645364 | ID=cds.MS.gene070813.t1;Parent=MS.gene070813.t1 |
Gene Sequence |
Protein sequence |