Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071482.t1 | CAD10807.1 | 92.7 | 901 | 12 | 4 | 1 | 847 | 25 | 925 | 0.00E+00 | 1533.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071482.t1 | Q8L4H4 | 90.6 | 901 | 30 | 5 | 1 | 847 | 26 | 925 | 0.0e+00 | 1500.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071482.t1 | Q8L6K7 | 92.7 | 901 | 12 | 4 | 1 | 847 | 25 | 925 | 0.0e+00 | 1533.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049549 | MS.gene071482 | 0.801439 | 9.00E-49 | -1.69E-46 |
MS.gene049634 | MS.gene071482 | 0.81411 | 1.82E-51 | -1.69E-46 |
MS.gene050612 | MS.gene071482 | -0.806831 | 6.80E-50 | -1.69E-46 |
MS.gene050675 | MS.gene071482 | -0.816698 | 4.84E-52 | -1.69E-46 |
MS.gene051138 | MS.gene071482 | 0.819432 | 1.17E-52 | -1.69E-46 |
MS.gene051651 | MS.gene071482 | 0.808258 | 3.38E-50 | -1.69E-46 |
MS.gene052211 | MS.gene071482 | 0.811676 | 6.22E-51 | -1.69E-46 |
MS.gene05240 | MS.gene071482 | 0.808027 | 3.79E-50 | -1.69E-46 |
MS.gene052702 | MS.gene071482 | 0.811608 | 6.43E-51 | -1.69E-46 |
MS.gene053031 | MS.gene071482 | 0.804712 | 1.89E-49 | -1.69E-46 |
MS.gene054181 | MS.gene071482 | 0.860954 | 1.44E-63 | -1.69E-46 |
MS.gene05483 | MS.gene071482 | 0.813177 | 2.92E-51 | -1.69E-46 |
MS.gene055154 | MS.gene071482 | 0.801312 | 9.55E-49 | -1.69E-46 |
MS.gene055240 | MS.gene071482 | 0.80265 | 5.07E-49 | -1.69E-46 |
MS.gene055977 | MS.gene071482 | 0.805572 | 1.25E-49 | -1.69E-46 |
MS.gene056697 | MS.gene071482 | 0.815894 | 7.32E-52 | -1.69E-46 |
MS.gene056748 | MS.gene071482 | 0.805124 | 1.55E-49 | -1.69E-46 |
MS.gene056856 | MS.gene071482 | 0.82432 | 8.60E-54 | -1.69E-46 |
MS.gene058099 | MS.gene071482 | 0.801681 | 8.03E-49 | -1.69E-46 |
MS.gene058603 | MS.gene071482 | 0.803887 | 2.81E-49 | -1.69E-46 |
MS.gene059402 | MS.gene071482 | 0.834087 | 3.67E-56 | -1.69E-46 |
MS.gene059953 | MS.gene071482 | 0.826208 | 3.08E-54 | -1.69E-46 |
MS.gene059955 | MS.gene071482 | 0.83768 | 4.50E-57 | -1.69E-46 |
MS.gene060405 | MS.gene071482 | 0.813092 | 3.05E-51 | -1.69E-46 |
MS.gene060593 | MS.gene071482 | 0.822028 | 2.95E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 196 sgRNAs with CRISPR-Local
Find 389 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGATTTATTTCCAGATATTT+TGG | 0.142767 | 5.2:+20903842 | MS.gene071482:intron |
TGAGAACCTGGTGCCTCTTC+TGG | 0.178944 | 5.2:+20905053 | MS.gene071482:CDS |
AAAGGAGAAGTTTGATGTTT+TGG | 0.204828 | 5.2:+20902175 | MS.gene071482:CDS |
GCAGTACAGTATTTGTAAAT+TGG | 0.258358 | 5.2:-20903022 | None:intergenic |
CTCCACTTTCTTGAACTAAA+TGG | 0.261835 | 5.2:+20902098 | MS.gene071482:CDS |
GTTTCCAGATTCTATCATTT+TGG | 0.270025 | 5.2:-20901896 | None:intergenic |
TGTGCTAAGGTTGCAGATTT+TGG | 0.281399 | 5.2:+20905991 | MS.gene071482:CDS |
CAAGGCAGTGTAACTGTTCT+TGG | 0.285412 | 5.2:-20902207 | None:intergenic |
GTATCTTCGTCCTTCATATA+TGG | 0.299830 | 5.2:-20903872 | None:intergenic |
TCAATTACTTTGGAAGGATT+TGG | 0.300093 | 5.2:+20904141 | MS.gene071482:CDS |
AAGAGGAACTGCAGGGTATC+TGG | 0.305174 | 5.2:+20906065 | MS.gene071482:CDS |
TTGATAGGTGAAGGAGGATT+TGG | 0.316015 | 5.2:+20904768 | MS.gene071482:CDS |
GCATATCTTCACACATTTCC+AGG | 0.322612 | 5.2:+20905910 | MS.gene071482:CDS |
GTTGAGGGTGTGTCAAGGTT+TGG | 0.328015 | 5.2:-20906980 | None:intergenic |
TGTGATCTGTTGTATAAGTT+AGG | 0.329358 | 5.2:-20900816 | None:intergenic |
TCTAAACAATGAGATTAAAA+AGG | 0.329454 | 5.2:+20902157 | MS.gene071482:CDS |
ACCTTTGATGCTCTTATGTA+TGG | 0.335506 | 5.2:-20906678 | None:intergenic |
TAAATGTGGCAGTGAGATAA+TGG | 0.340835 | 5.2:-20903714 | None:intergenic |
TTGAGGGTGTGTCAAGGTTT+GGG | 0.342531 | 5.2:-20906979 | None:intergenic |
GTGACACAAATGATGATATA+AGG | 0.357026 | 5.2:+20901256 | MS.gene071482:CDS |
GGATCCTCCAAGGCTGTCTA+TGG | 0.367205 | 5.2:-20906883 | None:intergenic |
TATTTGTAAATTGGTCATCT+TGG | 0.370606 | 5.2:-20903013 | None:intergenic |
TATACTTGATCCTTGATTGT+TGG | 0.382010 | 5.2:-20900956 | None:intergenic |
ATGACCAAAATGATAGAATC+TGG | 0.394181 | 5.2:+20901892 | MS.gene071482:CDS |
GAACAGTACAAAACTTTGAT+AGG | 0.397064 | 5.2:+20904753 | MS.gene071482:CDS |
GAGAACCTGGTGCCTCTTCT+GGG | 0.402397 | 5.2:+20905054 | MS.gene071482:CDS |
AAGGCATCTGGATCTGAGTT+TGG | 0.403130 | 5.2:+20902269 | MS.gene071482:CDS |
GGCAGTGAGATAATGGATTC+TGG | 0.404870 | 5.2:-20903707 | None:intergenic |
GCCTTGAACATTTCAGCAAA+TGG | 0.406670 | 5.2:+20902224 | MS.gene071482:CDS |
AAACCATGTAGGTATTCTTC+AGG | 0.407432 | 5.2:-20901192 | None:intergenic |
CTGCAGTTCCTCTTACTTCA+AGG | 0.413108 | 5.2:-20906056 | None:intergenic |
AAATGCCTACTTGTTGCCAT+TGG | 0.417206 | 5.2:-20904177 | None:intergenic |
TTTGGACAAGTATTCGTGAT+TGG | 0.417715 | 5.2:+20904044 | MS.gene071482:CDS |
AATATCTCCCTTGAGATCAT+TGG | 0.420306 | 5.2:-20902977 | None:intergenic |
AATCGAACTGGTTGTGGCTC+AGG | 0.421051 | 5.2:-20903148 | None:intergenic |
AGGATCAAGTATATTTGATA+AGG | 0.429085 | 5.2:+20900966 | MS.gene071482:CDS |
ATCGTCTAGACTCGAGGACT+TGG | 0.430688 | 5.2:+20901063 | MS.gene071482:CDS |
CATCGACCCATTTACTATCT+CGG | 0.433144 | 5.2:-20907002 | None:intergenic |
CAACCGCTACTCAATTGTTA+TGG | 0.433738 | 5.2:+20906905 | MS.gene071482:CDS |
CGAATATTTGAAATAGATGA+AGG | 0.435014 | 5.2:+20900914 | MS.gene071482:CDS |
CCGTGCCTGCAGGATTTCAT+AGG | 0.435211 | 5.2:-20902306 | None:intergenic |
GTGTATCCATTCATGTCTAA+TGG | 0.435304 | 5.2:+20905108 | MS.gene071482:CDS |
GGTGAGTAAGAGCTGTTTGT+AGG | 0.435408 | 5.2:-20902013 | None:intergenic |
CTGAGCTACAATGATCTTGA+TGG | 0.440022 | 5.2:+20903677 | MS.gene071482:CDS |
TCGAGTGGAGCTTGGTTGAA+TGG | 0.440331 | 5.2:+20906561 | MS.gene071482:CDS |
CCCATTTACTATCTCGGTTG+AGG | 0.441291 | 5.2:-20906996 | None:intergenic |
ACGAATACTTGTCCAAACTT+TGG | 0.442561 | 5.2:-20904038 | None:intergenic |
CACAAGTCAATTACTTTGGA+AGG | 0.442912 | 5.2:+20904135 | MS.gene071482:intron |
TAGACACAAGTCAATTACTT+TGG | 0.444110 | 5.2:+20904131 | MS.gene071482:intron |
TACCTCGTTATCAAATTCCT+TGG | 0.446565 | 5.2:-20904868 | None:intergenic |
TTATACTTTGCCAACAATCA+AGG | 0.447603 | 5.2:+20900946 | MS.gene071482:CDS |
ATAACCTTAGTCAAGGCATC+TGG | 0.448095 | 5.2:+20902257 | MS.gene071482:CDS |
CATGTTGTATAGCTGAAAGT+AGG | 0.448216 | 5.2:-20905032 | None:intergenic |
GGATCAAGTATATTTGATAA+GGG | 0.449346 | 5.2:+20900967 | MS.gene071482:CDS |
ATCAGTTAAACCATTCACTT+TGG | 0.454134 | 5.2:+20904710 | MS.gene071482:CDS |
TATGTTTCCCTTGAAGTAAG+AGG | 0.454726 | 5.2:+20906048 | MS.gene071482:CDS |
GTCATCTTGGTGACAAAGTA+AGG | 0.457126 | 5.2:-20903000 | None:intergenic |
TCCATTTGCTGAAATGTTCA+AGG | 0.457745 | 5.2:-20902225 | None:intergenic |
ATGAAGAAATCGTCTTTGCT+TGG | 0.461998 | 5.2:-20904678 | None:intergenic |
CACAGTTATGGGAGATGCAA+AGG | 0.462360 | 5.2:+20904008 | MS.gene071482:intron |
CAATTCAATCTGAGAAATGA+AGG | 0.463019 | 5.2:-20901160 | None:intergenic |
TGCCATTTAGTTCAAGAAAG+TGG | 0.463293 | 5.2:-20902100 | None:intergenic |
CCATTTACTATCTCGGTTGA+GGG | 0.463649 | 5.2:-20906995 | None:intergenic |
CTCAATTGTTATGGACAAAC+GGG | 0.464498 | 5.2:+20906914 | MS.gene071482:CDS |
TCTTTGCTAGATAGACTATA+CGG | 0.464758 | 5.2:+20905132 | MS.gene071482:CDS |
GGATTTCATAGGCATTCAAA+AGG | 0.465566 | 5.2:-20902295 | None:intergenic |
CTGATAAGCAGAAATAATCT+TGG | 0.466092 | 5.2:+20901234 | MS.gene071482:CDS |
CATCGGTCTCGAGGCCATCA+TGG | 0.466687 | 5.2:-20902055 | None:intergenic |
CTTATACAACAGATCACATC+TGG | 0.470658 | 5.2:+20900821 | MS.gene071482:CDS |
AATGCCTACTTGTTGCCATT+GGG | 0.472437 | 5.2:-20904176 | None:intergenic |
ACTCAATTGTTATGGACAAA+CGG | 0.473325 | 5.2:+20906913 | MS.gene071482:CDS |
TCAGCTTCTTCTGCAACTAA+AGG | 0.478391 | 5.2:+20900436 | MS.gene071482:CDS |
AAAATGAAGCATTGGAGAGT+TGG | 0.478523 | 5.2:+20902509 | MS.gene071482:CDS |
CGAAGAATTTAAACTATCAA+AGG | 0.480967 | 5.2:-20900999 | None:intergenic |
CGAGTGGAGCTTGGTTGAAT+GGG | 0.481621 | 5.2:+20906562 | MS.gene071482:CDS |
CACTTTGGAGTATATAGAGC+AGG | 0.482919 | 5.2:+20904725 | MS.gene071482:CDS |
GCGGTCATCCACATCAACTC+AGG | 0.485263 | 5.2:+20904842 | MS.gene071482:CDS |
CATTGCTGACATTGAAAGAC+AGG | 0.486566 | 5.2:-20901953 | None:intergenic |
TGGACGAACTCCAATCGCTC+AGG | 0.487148 | 5.2:-20902035 | None:intergenic |
GACAGGGGAAGGGCAGATGA+TGG | 0.491535 | 5.2:-20901936 | None:intergenic |
ATAACGAATCGAACTGGTTG+TGG | 0.493360 | 5.2:-20903154 | None:intergenic |
TGGCTGCAATCCATATATGA+AGG | 0.497624 | 5.2:+20903862 | MS.gene071482:CDS |
CAATCCACGACCGTGCCTGC+AGG | 0.497960 | 5.2:-20902316 | None:intergenic |
AAATCCTGCAGGCACGGTCG+TGG | 0.499359 | 5.2:+20902312 | MS.gene071482:CDS |
ATTACTTTGGAAGGATTTGG+TGG | 0.499806 | 5.2:+20904144 | MS.gene071482:CDS |
CTTGGTTCCCTGAGTTGATG+TGG | 0.500703 | 5.2:-20904850 | None:intergenic |
TGTAGGTATTCTTCAGGTAA+TGG | 0.502247 | 5.2:-20901186 | None:intergenic |
GTGGATGAAATTGTAGATCC+TGG | 0.502479 | 5.2:+20906699 | MS.gene071482:CDS |
CGTGGTCTCTTTATGTTGAG+AGG | 0.503044 | 5.2:-20906536 | None:intergenic |
AAAATCGAGCAATATACTGC+TGG | 0.505632 | 5.2:+20905957 | MS.gene071482:CDS |
TTTCTCAAAATACGCTCCTC+AGG | 0.506077 | 5.2:+20906014 | MS.gene071482:CDS |
CACTGTCAGAGCAGGACAAA+GGG | 0.506854 | 5.2:+20902121 | MS.gene071482:CDS |
ATAACATGTGATGATTCAAC+TGG | 0.511296 | 5.2:+20902567 | MS.gene071482:CDS |
CTTGAAGTAAGAGGAACTGC+AGG | 0.512081 | 5.2:+20906057 | MS.gene071482:CDS |
GTTCTACTTGAAATTGTAAG+TGG | 0.515263 | 5.2:+20906506 | MS.gene071482:CDS |
CAAGGAGGACGGTGGAAACG+AGG | 0.516962 | 5.2:-20903180 | None:intergenic |
GCATGGCCTATATGTTGAGT+AGG | 0.520964 | 5.2:-20906790 | None:intergenic |
TCTTTCTTCCAATGATCTCA+AGG | 0.521740 | 5.2:+20902969 | MS.gene071482:CDS |
AGATCCAGATGCCTTGACTA+AGG | 0.523607 | 5.2:-20902261 | None:intergenic |
TAGAACCCTACTCAACATAT+AGG | 0.523964 | 5.2:+20906784 | MS.gene071482:CDS |
TCTATATACTCCAAAGTGAA+TGG | 0.524077 | 5.2:-20904720 | None:intergenic |
GAGGTGTGACACTGTCTTTG+AGG | 0.524412 | 5.2:-20901980 | None:intergenic |
AGGGGAATAACGAATCGAAC+TGG | 0.525764 | 5.2:-20903160 | None:intergenic |
ACCACGGATCGAGTGGAGCT+TGG | 0.530340 | 5.2:+20906553 | MS.gene071482:CDS |
GATTTCATAGGCATTCAAAA+GGG | 0.531646 | 5.2:-20902294 | None:intergenic |
ACTTGAAATTGTAAGTGGAC+GGG | 0.532735 | 5.2:+20906511 | MS.gene071482:CDS |
TACTTGAAATTGTAAGTGGA+CGG | 0.532783 | 5.2:+20906510 | MS.gene071482:CDS |
AATTGTAGATCCTGGCATCA+AGG | 0.534326 | 5.2:+20906707 | MS.gene071482:CDS |
CAACCGAGAAAATGAAGCAT+TGG | 0.534615 | 5.2:+20902501 | MS.gene071482:CDS |
ACCATACATAAGAGCATCAA+AGG | 0.534866 | 5.2:+20906677 | MS.gene071482:CDS |
TCTTACTCACCCTGAGCGAT+TGG | 0.536491 | 5.2:+20902025 | MS.gene071482:CDS |
GAAGAATTTAAACTATCAAA+GGG | 0.537169 | 5.2:-20900998 | None:intergenic |
GGTTGATATTGTCCGCGAGT+TGG | 0.537850 | 5.2:+20906815 | MS.gene071482:CDS |
TGATATCCTCCCTTGATGCC+AGG | 0.537853 | 5.2:-20906717 | None:intergenic |
TATATCGGGGTAACAGAACT+AGG | 0.537938 | 5.2:+20901031 | MS.gene071482:CDS |
AGAGCAATAGAGAGTCTAGT+TGG | 0.540499 | 5.2:-20905258 | None:intergenic |
ATGAAATCCATAGACAGCCT+TGG | 0.547500 | 5.2:+20906876 | MS.gene071482:CDS |
AAGGAGGACGGTGGAAACGA+GGG | 0.548887 | 5.2:-20903179 | None:intergenic |
TGACATTGAAAGACAGGGGA+AGG | 0.549849 | 5.2:-20901947 | None:intergenic |
GTGATCTGTTGTATAAGTTA+GGG | 0.550371 | 5.2:-20900815 | None:intergenic |
TCATTTCTCAGATTGAATTG+AGG | 0.554741 | 5.2:+20901163 | MS.gene071482:CDS |
TGCAGTTCCTCTTACTTCAA+GGG | 0.554824 | 5.2:-20906055 | None:intergenic |
CTAAATGGCACTGTCAGAGC+AGG | 0.557078 | 5.2:+20902113 | MS.gene071482:CDS |
AAATCCATAGACAGCCTTGG+AGG | 0.559095 | 5.2:+20906879 | MS.gene071482:CDS |
TACAAAACTTTGATAGGTGA+AGG | 0.559294 | 5.2:+20904759 | MS.gene071482:CDS |
TGATATTGTCCGCGAGTTGG+AGG | 0.559974 | 5.2:+20906818 | MS.gene071482:CDS |
AAAGAGCCATTAGACATGAA+TGG | 0.560728 | 5.2:-20905114 | None:intergenic |
AAAATGATAGAATCTGGAAA+CGG | 0.561502 | 5.2:+20901898 | MS.gene071482:CDS |
CTGTGTATTACAGAACGTCC+TGG | 0.562671 | 5.2:-20905928 | None:intergenic |
CGATTGGAGTTCGTCCATGA+TGG | 0.564986 | 5.2:+20902041 | MS.gene071482:CDS |
CCTACTTGTTGCCATTGGGT+AGG | 0.566162 | 5.2:-20904172 | None:intergenic |
GCTGTTTGTAGGACTTGTAG+AGG | 0.570454 | 5.2:-20902002 | None:intergenic |
TCAAAATACGCTCCTCAGGA+AGG | 0.571651 | 5.2:+20906018 | MS.gene071482:CDS |
CACAGAGTATTCATAATCAT+CGG | 0.571691 | 5.2:-20902072 | None:intergenic |
GAATGCCTATGAAATCCTGC+AGG | 0.577482 | 5.2:+20902301 | MS.gene071482:CDS |
CATAACAATTGAGTAGCGGT+TGG | 0.577962 | 5.2:-20906904 | None:intergenic |
CATGGCCTATATGTTGAGTA+GGG | 0.580284 | 5.2:-20906789 | None:intergenic |
CTCGAGGACTTGGAAATCGA+GGG | 0.581541 | 5.2:+20901073 | MS.gene071482:CDS |
GTGATTGGAGCTATTACAAG+TGG | 0.581741 | 5.2:+20904059 | MS.gene071482:CDS |
CTTTCTTCCAATGATCTCAA+GGG | 0.582146 | 5.2:+20902970 | MS.gene071482:CDS |
ACTAGACTCTCTATTGCTCT+CGG | 0.587565 | 5.2:+20905261 | MS.gene071482:CDS |
ACTCGAGGACTTGGAAATCG+AGG | 0.591586 | 5.2:+20901072 | MS.gene071482:CDS |
ATTGTAGATCCTGGCATCAA+GGG | 0.595388 | 5.2:+20906708 | MS.gene071482:CDS |
AGGAGGACGGTGGAAACGAG+GGG | 0.596442 | 5.2:-20903178 | None:intergenic |
ATTCATAATCATCGGTCTCG+AGG | 0.596582 | 5.2:-20902064 | None:intergenic |
CTCAACATATAGGCCATGCA+TGG | 0.598047 | 5.2:+20906794 | MS.gene071482:CDS |
CCTATGAAATCCTGCAGGCA+CGG | 0.598420 | 5.2:+20902306 | MS.gene071482:CDS |
ACCAAGCTCCACTCGATCCG+TGG | 0.599353 | 5.2:-20906554 | None:intergenic |
TCATTACAGTAACCCAGAAG+AGG | 0.600934 | 5.2:-20905066 | None:intergenic |
GATATCATGCAGAAGCATTG+TGG | 0.602358 | 5.2:+20906733 | MS.gene071482:CDS |
ATTGCTCTCGGTGCAGCTCG+AGG | 0.603102 | 5.2:+20905273 | MS.gene071482:CDS |
GCACTGTCAGAGCAGGACAA+AGG | 0.604005 | 5.2:+20902120 | MS.gene071482:CDS |
TTACCTGAAGAATACCTACA+TGG | 0.606447 | 5.2:+20901189 | MS.gene071482:CDS |
GATCAAGTATATTTGATAAG+GGG | 0.606754 | 5.2:+20900968 | MS.gene071482:CDS |
GGATCAGAGCATGTGTGCTA+AGG | 0.606961 | 5.2:+20905978 | MS.gene071482:CDS |
CAGGACGTTCTGTAATACAC+AGG | 0.607997 | 5.2:+20905929 | MS.gene071482:CDS |
AGCTATACAACATGAGAACC+TGG | 0.610849 | 5.2:+20905041 | MS.gene071482:CDS |
ACTCAATATAACCTTAGTCA+AGG | 0.611924 | 5.2:+20902250 | MS.gene071482:CDS |
TCTGCTGTAGATGTAGTTGA+AGG | 0.614925 | 5.2:-20906942 | None:intergenic |
CACATCAACTCAGGGAACCA+AGG | 0.616225 | 5.2:+20904851 | MS.gene071482:CDS |
TAAAGAGACCACGGATCGAG+TGG | 0.618328 | 5.2:+20906546 | MS.gene071482:CDS |
GACATTGAAAGACAGGGGAA+GGG | 0.623039 | 5.2:-20901946 | None:intergenic |
ATTTCATAGGCATTCAAAAG+GGG | 0.623388 | 5.2:-20902293 | None:intergenic |
CGGACAATATCAACCATGCA+TGG | 0.623864 | 5.2:-20906807 | None:intergenic |
TCTCGGTTGAGGGTGTGTCA+AGG | 0.624558 | 5.2:-20906985 | None:intergenic |
AATTCAATCTGAGAAATGAA+GGG | 0.631420 | 5.2:-20901159 | None:intergenic |
AAAACTTTGATAGGTGAAGG+AGG | 0.631623 | 5.2:+20904762 | MS.gene071482:CDS |
AGTAACCCAGAAGAGGCACC+AGG | 0.633359 | 5.2:-20905059 | None:intergenic |
CGGTCATCCACATCAACTCA+GGG | 0.639022 | 5.2:+20904843 | MS.gene071482:CDS |
TCTAGACGATGGTCAAGAAG+TGG | 0.639436 | 5.2:+20904809 | MS.gene071482:CDS |
TGTCCATAACAATTGAGTAG+CGG | 0.640240 | 5.2:-20906908 | None:intergenic |
CTCTCAACATAAAGAGACCA+CGG | 0.644819 | 5.2:+20906537 | MS.gene071482:CDS |
AAGAAGTGGCAGTGAAAGTG+CGG | 0.648712 | 5.2:+20904823 | MS.gene071482:CDS |
GTTTGTAGGACTTGTAGAGG+AGG | 0.649103 | 5.2:-20901999 | None:intergenic |
GGATTTGGTTCTGTTTACAG+AGG | 0.650878 | 5.2:+20904783 | MS.gene071482:CDS |
AGAAGCATTGTGGAGAGTTG+TGG | 0.651373 | 5.2:+20906743 | MS.gene071482:CDS |
GTAGATCCTGGCATCAAGGG+AGG | 0.651462 | 5.2:+20906711 | MS.gene071482:CDS |
CACTAGTAGCGAAACCATGT+AGG | 0.654149 | 5.2:-20901203 | None:intergenic |
GGACGAACTCCAATCGCTCA+GGG | 0.655814 | 5.2:-20902034 | None:intergenic |
ATACATAAGAGCATCAAAGG+TGG | 0.662785 | 5.2:+20906680 | MS.gene071482:CDS |
ATTAAGATCGTCTAGACTCG+AGG | 0.663395 | 5.2:+20901057 | MS.gene071482:CDS |
AACCAAGGAATTTGATAACG+AGG | 0.666559 | 5.2:+20904866 | MS.gene071482:CDS |
AATGATATCAGCAAGGAGGA+CGG | 0.666972 | 5.2:-20903191 | None:intergenic |
GATATCAGCAAGGAGGACGG+TGG | 0.669075 | 5.2:-20903188 | None:intergenic |
AGTAGCGGTTGGATCCTCCA+AGG | 0.671631 | 5.2:-20906893 | None:intergenic |
ATTGCTGACATTGAAAGACA+GGG | 0.673971 | 5.2:-20901952 | None:intergenic |
TGGTGGAAAGACCTACCCAA+TGG | 0.675108 | 5.2:+20904161 | MS.gene071482:CDS |
GCTACAATGATCTTGATGGA+CGG | 0.676970 | 5.2:+20903681 | MS.gene071482:CDS |
ACATAACTGTCTCCTTCCTG+AGG | 0.680884 | 5.2:-20906030 | None:intergenic |
TAATTACAATGATATCAGCA+AGG | 0.685291 | 5.2:-20903198 | None:intergenic |
TACAGAGGCACTCTAGACGA+TGG | 0.685545 | 5.2:+20904798 | MS.gene071482:CDS |
TTGAAGTAAGAGGAACTGCA+GGG | 0.688272 | 5.2:+20906058 | MS.gene071482:CDS |
AGGACGTTCTGTAATACACA+GGG | 0.698331 | 5.2:+20905930 | MS.gene071482:CDS |
TGAGAGCATCCTCCAACTCG+CGG | 0.705970 | 5.2:-20906827 | None:intergenic |
TTGCTGACATTGAAAGACAG+GGG | 0.711429 | 5.2:-20901951 | None:intergenic |
TTACAATGATATCAGCAAGG+AGG | 0.769888 | 5.2:-20903195 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTAAAAGATTTTATGATTA+AGG | + | chr5.2:20903432-20903451 | MS.gene071482:intron | 10.0% |
!! | ACAATAATATCAATTGAAAT+AGG | + | chr5.2:20904499-20904518 | MS.gene071482:intron | 15.0% |
!! | ATTTAAACCAAAATAATTTG+AGG | + | chr5.2:20901485-20901504 | MS.gene071482:intron | 15.0% |
!!! | AACTTGTTTTTTTTTTTACA+AGG | + | chr5.2:20900592-20900611 | MS.gene071482:intron | 15.0% |
!!! | CATATTTTAATTAACATGAA+AGG | + | chr5.2:20900525-20900544 | MS.gene071482:intron | 15.0% |
!!! | TCTATTTGTTATTTAAATTC+AGG | - | chr5.2:20901635-20901654 | None:intergenic | 15.0% |
!!! | TGAAATTTAATTTCATAACA+GGG | + | chr5.2:20905205-20905224 | MS.gene071482:intron | 15.0% |
!! | AAATGATTGATCTACATTTA+TGG | + | chr5.2:20903645-20903664 | MS.gene071482:intron | 20.0% |
!! | AACGTTTCTAATTAAAACTT+TGG | + | chr5.2:20904933-20904952 | MS.gene071482:intron | 20.0% |
!! | ATCATTTGAAAATGATTTAG+TGG | - | chr5.2:20903632-20903651 | None:intergenic | 20.0% |
!! | ATGATATTAGTAAAACAAAG+AGG | - | chr5.2:20906600-20906619 | None:intergenic | 20.0% |
!! | GAAGAATTTAAACTATCAAA+GGG | - | chr5.2:20901001-20901020 | None:intergenic | 20.0% |
!! | GTAAAAATAAAACAACATCA+TGG | - | chr5.2:20905305-20905324 | None:intergenic | 20.0% |
!! | GTTACAACATTATTAACTAA+TGG | - | chr5.2:20903108-20903127 | None:intergenic | 20.0% |
!! | TATTAATTATGATCATCTCA+TGG | - | chr5.2:20900551-20900570 | None:intergenic | 20.0% |
!! | TCTAAACAATGAGATTAAAA+AGG | + | chr5.2:20902157-20902176 | MS.gene071482:CDS | 20.0% |
!! | TGAAATAGAAAATTAGTTGA+AGG | - | chr5.2:20902405-20902424 | None:intergenic | 20.0% |
!!! | AAATTCATTTTGTACGAAAT+TGG | - | chr5.2:20900718-20900737 | None:intergenic | 20.0% |
!!! | ACTTACAATGATTTTAAATG+TGG | - | chr5.2:20903731-20903750 | None:intergenic | 20.0% |
!!! | AGAAAGTTGATTTAATCTTA+GGG | - | chr5.2:20904350-20904369 | None:intergenic | 20.0% |
!!! | ATGTTGTTTTCTATGTTTAA+AGG | - | chr5.2:20900508-20900527 | None:intergenic | 20.0% |
!!! | ATTTAGTGGTAATTTTTCAA+TGG | - | chr5.2:20903618-20903637 | None:intergenic | 20.0% |
!!! | CTGAAATTTAATTTCATAAC+AGG | + | chr5.2:20905204-20905223 | MS.gene071482:intron | 20.0% |
!!! | GAAATTTAATTTCATAACAG+GGG | + | chr5.2:20905206-20905225 | MS.gene071482:intron | 20.0% |
!!! | GATGTTGTTTTATTTTTACT+AGG | + | chr5.2:20905306-20905325 | MS.gene071482:intron | 20.0% |
!!! | TAGAAAGTTGATTTAATCTT+AGG | - | chr5.2:20904351-20904370 | None:intergenic | 20.0% |
!!! | TCATATTCCTCAAATTATTT+TGG | - | chr5.2:20901495-20901514 | None:intergenic | 20.0% |
!!! | TCATTGTAAGTTTTATATGT+TGG | + | chr5.2:20903740-20903759 | MS.gene071482:intron | 20.0% |
!!! | TCTTCGTTTTATGTTTATAT+CGG | + | chr5.2:20901016-20901035 | MS.gene071482:CDS | 20.0% |
!!! | TGATTTATTTCCAGATATTT+TGG | + | chr5.2:20903842-20903861 | MS.gene071482:intron | 20.0% |
!!! | TGTGATCTTACTTTATTTTT+AGG | + | chr5.2:20901281-20901300 | MS.gene071482:intron | 20.0% |
!!! | TGTTGTTTTCTATGTTTAAA+GGG | - | chr5.2:20900507-20900526 | None:intergenic | 20.0% |
!!! | TTACTAATATCATTTTCAAG+TGG | + | chr5.2:20906607-20906626 | MS.gene071482:intron | 20.0% |
!!! | TTTTAATTAGAAACGTTTTG+TGG | - | chr5.2:20904930-20904949 | None:intergenic | 20.0% |
! | AAAATGATAGAATCTGGAAA+CGG | + | chr5.2:20901898-20901917 | MS.gene071482:CDS | 25.0% |
! | AAAGGAAAAAAACCAAAGTT+TGG | + | chr5.2:20904026-20904045 | MS.gene071482:CDS | 25.0% |
! | AAGAAATCAATATAGTCCTT+TGG | - | chr5.2:20901113-20901132 | None:intergenic | 25.0% |
! | AATCAAAATCTTTCTCTGTA+AGG | + | chr5.2:20901429-20901448 | MS.gene071482:intron | 25.0% |
! | AATTCAATCTGAGAAATGAA+GGG | - | chr5.2:20901162-20901181 | None:intergenic | 25.0% |
! | AGGATCAAGTATATTTGATA+AGG | + | chr5.2:20900966-20900985 | MS.gene071482:CDS | 25.0% |
! | ATATGGTAAAGATATTTGTG+AGG | + | chr5.2:20905608-20905627 | MS.gene071482:intron | 25.0% |
! | ATCAAAATCTTTCTCTGTAA+GGG | + | chr5.2:20901430-20901449 | MS.gene071482:intron | 25.0% |
! | ATGAGAATTATCTAGATAGA+TGG | + | chr5.2:20904443-20904462 | MS.gene071482:intron | 25.0% |
! | ATGTCAAAACATATTTCTCA+AGG | - | chr5.2:20903520-20903539 | None:intergenic | 25.0% |
! | ATTAGACATTCAGATTAAGA+CGG | - | chr5.2:20906114-20906133 | None:intergenic | 25.0% |
! | ATTTAACTGTTTATCCAAAC+AGG | + | chr5.2:20902894-20902913 | MS.gene071482:intron | 25.0% |
! | CAAAGAGAAAAATATTAGAC+TGG | + | chr5.2:20905235-20905254 | MS.gene071482:CDS | 25.0% |
! | CAAATGAACAATGAAAAAAG+AGG | + | chr5.2:20905423-20905442 | MS.gene071482:intron | 25.0% |
! | CAATGATTATGTATTACAAC+AGG | + | chr5.2:20905454-20905473 | MS.gene071482:intron | 25.0% |
! | CGAAGAATTTAAACTATCAA+AGG | - | chr5.2:20901002-20901021 | None:intergenic | 25.0% |
! | CTATATGTAAAGTGAAACAT+AGG | - | chr5.2:20901551-20901570 | None:intergenic | 25.0% |
! | CTTCATATTAAATACCCTAA+AGG | + | chr5.2:20901725-20901744 | MS.gene071482:intron | 25.0% |
! | GATCAAGTATATTTGATAAG+GGG | + | chr5.2:20900968-20900987 | MS.gene071482:CDS | 25.0% |
! | GGATCAAGTATATTTGATAA+GGG | + | chr5.2:20900967-20900986 | MS.gene071482:CDS | 25.0% |
! | GTTGCTAAAATTTCTTTCAA+GGG | + | chr5.2:20900687-20900706 | MS.gene071482:intron | 25.0% |
! | TAATTACAATGATATCAGCA+AGG | - | chr5.2:20903201-20903220 | None:intergenic | 25.0% |
! | TATGGTAAAGATATTTGTGA+GGG | + | chr5.2:20905609-20905628 | MS.gene071482:intron | 25.0% |
! | TATTATTGTTACTGTACAGA+TGG | - | chr5.2:20904488-20904507 | None:intergenic | 25.0% |
! | TATTTCTCAAGGATTTCATA+TGG | - | chr5.2:20903509-20903528 | None:intergenic | 25.0% |
! | TATTTGTAAATTGGTCATCT+TGG | - | chr5.2:20903016-20903035 | None:intergenic | 25.0% |
! | TCACTTCAATAGAAAAACTA+AGG | - | chr5.2:20901768-20901787 | None:intergenic | 25.0% |
! | TCTATCTAGATAATTCTCAT+AGG | - | chr5.2:20904443-20904462 | None:intergenic | 25.0% |
! | TGTGAAGAATAAAGAACTTT+AGG | - | chr5.2:20905788-20905807 | None:intergenic | 25.0% |
! | TGTTGCTAAAATTTCTTTCA+AGG | + | chr5.2:20900686-20900705 | MS.gene071482:intron | 25.0% |
! | TTAGTGTCCTAAATATGTTA+TGG | - | chr5.2:20905857-20905876 | None:intergenic | 25.0% |
! | TTATTGTGATTAGAACGATA+TGG | + | chr5.2:20905591-20905610 | MS.gene071482:intron | 25.0% |
! | TTGTGAGTTGCATATTATAA+TGG | - | chr5.2:20901689-20901708 | None:intergenic | 25.0% |
!! | AAACATCCACATTAATTTTG+TGG | + | chr5.2:20903062-20903081 | MS.gene071482:intron | 25.0% |
!! | AACATCCACATTAATTTTGT+GGG | + | chr5.2:20903063-20903082 | MS.gene071482:intron | 25.0% |
!! | AATCTGACAACTAAGTATTT+TGG | + | chr5.2:20905712-20905731 | MS.gene071482:intron | 25.0% |
!! | CAGTAGTTTAAGAATTTGTT+TGG | + | chr5.2:20904961-20904980 | MS.gene071482:intron | 25.0% |
!! | CGAATATTTGAAATAGATGA+AGG | + | chr5.2:20900914-20900933 | MS.gene071482:CDS | 25.0% |
!! | CTTCGTTTTATGTTTATATC+GGG | + | chr5.2:20901017-20901036 | MS.gene071482:CDS | 25.0% |
!! | TAAAACAAAATTTCGGGTAT+TGG | - | chr5.2:20900871-20900890 | None:intergenic | 25.0% |
!! | TATCGGTATCTATCAATTTT+AGG | + | chr5.2:20901862-20901881 | MS.gene071482:intron | 25.0% |
!! | TTCGTTTTATGTTTATATCG+GGG | + | chr5.2:20901018-20901037 | MS.gene071482:CDS | 25.0% |
!! | TTTTCGTCCATAACATATTT+AGG | + | chr5.2:20905847-20905866 | MS.gene071482:intron | 25.0% |
!!! | ACTTTTTTCAGATAATTGCT+GGG | - | chr5.2:20906465-20906484 | None:intergenic | 25.0% |
!!! | AGTGGTTCATATATTTTAGT+AGG | + | chr5.2:20906625-20906644 | MS.gene071482:intron | 25.0% |
!!! | TAATTGACTTGTGTCTATAA+CGG | - | chr5.2:20904128-20904147 | None:intergenic | 25.0% |
!!! | TTATATCTGCATGTTTTTGT+TGG | - | chr5.2:20904647-20904666 | None:intergenic | 25.0% |
AAATCAATATAGTCCTTTGG+TGG | - | chr5.2:20901110-20901129 | None:intergenic | 30.0% | |
ACAGAAAGGTCTCATAATAT+CGG | + | chr5.2:20901845-20901864 | MS.gene071482:intron | 30.0% | |
ACTCAATATAACCTTAGTCA+AGG | + | chr5.2:20902250-20902269 | MS.gene071482:CDS | 30.0% | |
ACTCAATTGTTATGGACAAA+CGG | + | chr5.2:20906913-20906932 | MS.gene071482:CDS | 30.0% | |
AGTTATGACACTGTTTGAAA+GGG | + | chr5.2:20902686-20902705 | MS.gene071482:intron | 30.0% | |
ATAACATGTGATGATTCAAC+TGG | + | chr5.2:20902567-20902586 | MS.gene071482:CDS | 30.0% | |
ATACACTTCAGATTCAGAAT+AGG | - | chr5.2:20906240-20906259 | None:intergenic | 30.0% | |
ATCAGTTAAACCATTCACTT+TGG | + | chr5.2:20904710-20904729 | MS.gene071482:CDS | 30.0% | |
ATCATTTGTAGTCACAGATA+TGG | - | chr5.2:20906295-20906314 | None:intergenic | 30.0% | |
ATGACCAAAATGATAGAATC+TGG | + | chr5.2:20901892-20901911 | MS.gene071482:CDS | 30.0% | |
ATTTCATAGGCATTCAAAAG+GGG | - | chr5.2:20902296-20902315 | None:intergenic | 30.0% | |
CAATCATAAGACTAATCAGA+TGG | - | chr5.2:20904998-20905017 | None:intergenic | 30.0% | |
CAATTCAATCTGAGAAATGA+AGG | - | chr5.2:20901163-20901182 | None:intergenic | 30.0% | |
CATTCTACTTCATCCATATT+AGG | + | chr5.2:20903763-20903782 | MS.gene071482:intron | 30.0% | |
CTGATAAGCAGAAATAATCT+TGG | + | chr5.2:20901234-20901253 | MS.gene071482:CDS | 30.0% | |
CTGTAGCATGTGAAAAAAAT+GGG | - | chr5.2:20906376-20906395 | None:intergenic | 30.0% | |
CTGTGGCTAAAACAAAATTT+CGG | - | chr5.2:20900878-20900897 | None:intergenic | 30.0% | |
GAACAGTACAAAACTTTGAT+AGG | + | chr5.2:20904753-20904772 | MS.gene071482:CDS | 30.0% | |
GATTTCATAGGCATTCAAAA+GGG | - | chr5.2:20902297-20902316 | None:intergenic | 30.0% | |
GATTTCTTTCTGCTTATTGA+AGG | + | chr5.2:20901125-20901144 | MS.gene071482:intron | 30.0% | |
GCAGTACAGTATTTGTAAAT+TGG | - | chr5.2:20903025-20903044 | None:intergenic | 30.0% | |
GTGACACAAATGATGATATA+AGG | + | chr5.2:20901256-20901275 | MS.gene071482:CDS | 30.0% | |
GTGATCTGTTGTATAAGTTA+GGG | - | chr5.2:20900818-20900837 | None:intergenic | 30.0% | |
GTTATCTTTAACATAGTGCA+TGG | + | chr5.2:20904292-20904311 | MS.gene071482:intron | 30.0% | |
GTTCTACTTGAAATTGTAAG+TGG | + | chr5.2:20906506-20906525 | MS.gene071482:CDS | 30.0% | |
TACAAAACTTTGATAGGTGA+AGG | + | chr5.2:20904759-20904778 | MS.gene071482:CDS | 30.0% | |
TACTTGAAATTGTAAGTGGA+CGG | + | chr5.2:20906510-20906529 | MS.gene071482:CDS | 30.0% | |
TAGACACAAGTCAATTACTT+TGG | + | chr5.2:20904131-20904150 | MS.gene071482:intron | 30.0% | |
TATACTTGATCCTTGATTGT+TGG | - | chr5.2:20900959-20900978 | None:intergenic | 30.0% | |
TCATGTTTAACAAATGACCT+AGG | + | chr5.2:20903228-20903247 | MS.gene071482:intron | 30.0% | |
TCATTTCTCAGATTGAATTG+AGG | + | chr5.2:20901163-20901182 | MS.gene071482:CDS | 30.0% | |
TCATTTGTAGTCACAGATAT+GGG | - | chr5.2:20906294-20906313 | None:intergenic | 30.0% | |
TCGAAAATAGCTTCCTAATA+TGG | - | chr5.2:20903779-20903798 | None:intergenic | 30.0% | |
TCTCTACTGAACATATAAAC+TGG | + | chr5.2:20905510-20905529 | MS.gene071482:intron | 30.0% | |
TCTGTAGCATGTGAAAAAAA+TGG | - | chr5.2:20906377-20906396 | None:intergenic | 30.0% | |
TCTTTGCTAGATAGACTATA+CGG | + | chr5.2:20905132-20905151 | MS.gene071482:CDS | 30.0% | |
TGATCTACATTTATGGATCA+GGG | + | chr5.2:20903652-20903671 | MS.gene071482:intron | 30.0% | |
TGTGATCTGTTGTATAAGTT+AGG | - | chr5.2:20900819-20900838 | None:intergenic | 30.0% | |
TGTGGCTAAAACAAAATTTC+GGG | - | chr5.2:20900877-20900896 | None:intergenic | 30.0% | |
TTAGTAAAACAAAGAGGTCA+TGG | - | chr5.2:20906594-20906613 | None:intergenic | 30.0% | |
TTATACTTTGCCAACAATCA+AGG | + | chr5.2:20900946-20900965 | MS.gene071482:CDS | 30.0% | |
TTATCCACGTGAATTTGAAT+GGG | + | chr5.2:20906324-20906343 | MS.gene071482:intron | 30.0% | |
TTATGTAACCAACATGAGTT+GGG | - | chr5.2:20903351-20903370 | None:intergenic | 30.0% | |
TTGATCTACATTTATGGATC+AGG | + | chr5.2:20903651-20903670 | MS.gene071482:intron | 30.0% | |
TTTATCCACGTGAATTTGAA+TGG | + | chr5.2:20906323-20906342 | MS.gene071482:intron | 30.0% | |
TTTCTCATACACAAGTTTGT+TGG | + | chr5.2:20906176-20906195 | MS.gene071482:intron | 30.0% | |
! | AAAAGTGATGTTTTCAGCTT+TGG | + | chr5.2:20906479-20906498 | MS.gene071482:CDS | 30.0% |
! | AAAGGAGAAGTTTGATGTTT+TGG | + | chr5.2:20902175-20902194 | MS.gene071482:CDS | 30.0% |
! | ACATGTATATAAGCTGTTTC+TGG | + | chr5.2:20902728-20902747 | MS.gene071482:intron | 30.0% |
! | ACATTTCTTCAGTTTTCTGA+TGG | - | chr5.2:20906204-20906223 | None:intergenic | 30.0% |
! | AGTGATTTGTGTTTAGAGTT+TGG | + | chr5.2:20901783-20901802 | MS.gene071482:intron | 30.0% |
! | CACAGAGTATTCATAATCAT+CGG | - | chr5.2:20902075-20902094 | None:intergenic | 30.0% |
! | GAACATTTTTATTGCTTCTG+TGG | - | chr5.2:20900895-20900914 | None:intergenic | 30.0% |
! | GAATGATGTGACTATAGTTT+TGG | - | chr5.2:20904239-20904258 | None:intergenic | 30.0% |
! | GTGTACACTTACAATCTTTT+TGG | - | chr5.2:20902352-20902371 | None:intergenic | 30.0% |
! | GTTTCCAGATTCTATCATTT+TGG | - | chr5.2:20901899-20901918 | None:intergenic | 30.0% |
! | GTTTCTGTTTTCACAGTTAT+GGG | + | chr5.2:20903997-20904016 | MS.gene071482:intron | 30.0% |
! | TCAATTACTTTGGAAGGATT+TGG | + | chr5.2:20904141-20904160 | MS.gene071482:CDS | 30.0% |
! | TGTGAAATTTGTTCATGTCA+TGG | - | chr5.2:20906406-20906425 | None:intergenic | 30.0% |
!! | AAAAGAAGTGTTAGTGTAAG+AGG | - | chr5.2:20902433-20902452 | None:intergenic | 30.0% |
!! | AAAGAAGTGTTAGTGTAAGA+GGG | - | chr5.2:20902432-20902451 | None:intergenic | 30.0% |
!! | ACACTTACAATCTTTTTGGT+TGG | - | chr5.2:20902348-20902367 | None:intergenic | 30.0% |
!! | ATTCTATCATTTTGGTCATC+TGG | - | chr5.2:20901891-20901910 | None:intergenic | 30.0% |
!! | GTATAAGTTAGGGTTGTTTT+TGG | - | chr5.2:20900808-20900827 | None:intergenic | 30.0% |
!! | GTTGTTTTCATAAGCTATCA+TGG | - | chr5.2:20902772-20902791 | None:intergenic | 30.0% |
!! | TGGATCACTTTTGATTACTT+TGG | + | chr5.2:20904079-20904098 | MS.gene071482:CDS | 30.0% |
!! | TGTTTCTGTTTTCACAGTTA+TGG | + | chr5.2:20903996-20904015 | MS.gene071482:intron | 30.0% |
!! | TTCTATCATTTTGGTCATCT+GGG | - | chr5.2:20901890-20901909 | None:intergenic | 30.0% |
!!! | CACTTTTTTCAGATAATTGC+TGG | - | chr5.2:20906466-20906485 | None:intergenic | 30.0% |
!!! | TGTTTTTGGATCTGTGTAAT+TGG | - | chr5.2:20900794-20900813 | None:intergenic | 30.0% |
AAAACTTTGATAGGTGAAGG+AGG | + | chr5.2:20904762-20904781 | MS.gene071482:CDS | 35.0% | |
AAAATCGAGCAATATACTGC+TGG | + | chr5.2:20905957-20905976 | MS.gene071482:CDS | 35.0% | |
AAACCATGTAGGTATTCTTC+AGG | - | chr5.2:20901195-20901214 | None:intergenic | 35.0% | |
AAACTAAGGCTACACTAGAT+TGG | - | chr5.2:20901754-20901773 | None:intergenic | 35.0% | |
AAACTGTAGTGAAGTCAGTT+AGG | - | chr5.2:20905830-20905849 | None:intergenic | 35.0% | |
AAAGAGCCATTAGACATGAA+TGG | - | chr5.2:20905117-20905136 | None:intergenic | 35.0% | |
AACTAAGGCTACACTAGATT+GGG | - | chr5.2:20901753-20901772 | None:intergenic | 35.0% | |
AATATCTCCCTTGAGATCAT+TGG | - | chr5.2:20902980-20902999 | None:intergenic | 35.0% | |
ACCTTTGATGCTCTTATGTA+TGG | - | chr5.2:20906681-20906700 | None:intergenic | 35.0% | |
ACGAATACTTGTCCAAACTT+TGG | - | chr5.2:20904041-20904060 | None:intergenic | 35.0% | |
ACTACTTCCATCATGATCAT+AGG | - | chr5.2:20904573-20904592 | None:intergenic | 35.0% | |
ACTTGAAATTGTAAGTGGAC+GGG | + | chr5.2:20906511-20906530 | MS.gene071482:CDS | 35.0% | |
ATCACATGTTATTCCTTTCC+AGG | - | chr5.2:20902559-20902578 | None:intergenic | 35.0% | |
ATGAAGAAATCGTCTTTGCT+TGG | - | chr5.2:20904681-20904700 | None:intergenic | 35.0% | |
ATGATTAAGGCTGTTCTCTA+CGG | + | chr5.2:20903445-20903464 | MS.gene071482:intron | 35.0% | |
ATTATGAGACCTTTCTGTCA+TGG | - | chr5.2:20901843-20901862 | None:intergenic | 35.0% | |
ATTGCTGACATTGAAAGACA+GGG | - | chr5.2:20901955-20901974 | None:intergenic | 35.0% | |
CAATCACAAGCAAAATGATG+AGG | + | chr5.2:20905536-20905555 | MS.gene071482:intron | 35.0% | |
CACAAGTCAATTACTTTGGA+AGG | + | chr5.2:20904135-20904154 | MS.gene071482:intron | 35.0% | |
CATAGGTTATGTCATGCATT+TGG | - | chr5.2:20901534-20901553 | None:intergenic | 35.0% | |
CATGTTGTATAGCTGAAAGT+AGG | - | chr5.2:20905035-20905054 | None:intergenic | 35.0% | |
CTAACACATAACTTTCATGC+AGG | + | chr5.2:20906650-20906669 | MS.gene071482:intron | 35.0% | |
CTCAATTGTTATGGACAAAC+GGG | + | chr5.2:20906914-20906933 | MS.gene071482:CDS | 35.0% | |
CTCCACTTTCTTGAACTAAA+TGG | + | chr5.2:20902098-20902117 | MS.gene071482:CDS | 35.0% | |
CTGAATTTCTTTCTTCACCA+TGG | + | chr5.2:20903556-20903575 | MS.gene071482:intron | 35.0% | |
CTGTTCCCACAAAATTAATG+TGG | - | chr5.2:20903071-20903090 | None:intergenic | 35.0% | |
CTTATACAACAGATCACATC+TGG | + | chr5.2:20900821-20900840 | MS.gene071482:CDS | 35.0% | |
CTTATGTAACCAACATGAGT+TGG | - | chr5.2:20903352-20903371 | None:intergenic | 35.0% | |
CTTTCTTCCAATGATCTCAA+GGG | + | chr5.2:20902970-20902989 | MS.gene071482:CDS | 35.0% | |
GAGTTATGACACTGTTTGAA+AGG | + | chr5.2:20902685-20902704 | MS.gene071482:intron | 35.0% | |
GCAAAACTTGTAAGCACATA+TGG | - | chr5.2:20902932-20902951 | None:intergenic | 35.0% | |
GCTCATATTAGTATCATCCT+AGG | - | chr5.2:20903248-20903267 | None:intergenic | 35.0% | |
GGATTTCATAGGCATTCAAA+AGG | - | chr5.2:20902298-20902317 | None:intergenic | 35.0% | |
GTATCTTCGTCCTTCATATA+TGG | - | chr5.2:20903875-20903894 | None:intergenic | 35.0% | |
GTGTATCCATTCATGTCTAA+TGG | + | chr5.2:20905108-20905127 | MS.gene071482:CDS | 35.0% | |
TAAAAGAGCGACTGATAGTT+CGG | + | chr5.2:20905644-20905663 | MS.gene071482:intron | 35.0% | |
TAAATGTGGCAGTGAGATAA+TGG | - | chr5.2:20903717-20903736 | None:intergenic | 35.0% | |
TACCTCGTTATCAAATTCCT+TGG | - | chr5.2:20904871-20904890 | None:intergenic | 35.0% | |
TAGAACCCTACTCAACATAT+AGG | + | chr5.2:20906784-20906803 | MS.gene071482:CDS | 35.0% | |
TATATAGTCCCAACTCATGT+TGG | + | chr5.2:20903340-20903359 | MS.gene071482:intron | 35.0% | |
TATGTTTCCCTTGAAGTAAG+AGG | + | chr5.2:20906048-20906067 | MS.gene071482:CDS | 35.0% | |
TCAATGGCACTAATAACTGT+AGG | - | chr5.2:20903602-20903621 | None:intergenic | 35.0% | |
TCACATGTTATTCCTTTCCA+GGG | - | chr5.2:20902558-20902577 | None:intergenic | 35.0% | |
TCTGAATAAGTTCCACTGAA+AGG | - | chr5.2:20902456-20902475 | None:intergenic | 35.0% | |
TCTTAACAGACCCTAAAAAG+TGG | - | chr5.2:20902624-20902643 | None:intergenic | 35.0% | |
TCTTTCTTCCAATGATCTCA+AGG | + | chr5.2:20902969-20902988 | MS.gene071482:CDS | 35.0% | |
TGGATTGAATAGTAGAGTTC+TGG | - | chr5.2:20901669-20901688 | None:intergenic | 35.0% | |
TGTAGGTATTCTTCAGGTAA+TGG | - | chr5.2:20901189-20901208 | None:intergenic | 35.0% | |
TGTCCATAACAATTGAGTAG+CGG | - | chr5.2:20906911-20906930 | None:intergenic | 35.0% | |
TTACAATGATATCAGCAAGG+AGG | - | chr5.2:20903198-20903217 | None:intergenic | 35.0% | |
TTACCTGAAGAATACCTACA+TGG | + | chr5.2:20901189-20901208 | MS.gene071482:CDS | 35.0% | |
TTCCAGGGAAAATCATACAA+GGG | - | chr5.2:20902543-20902562 | None:intergenic | 35.0% | |
TTCCATCATGATCATAGGAA+TGG | - | chr5.2:20904568-20904587 | None:intergenic | 35.0% | |
TTTCCAGGGAAAATCATACA+AGG | - | chr5.2:20902544-20902563 | None:intergenic | 35.0% | |
TTTGGACAAGTATTCGTGAT+TGG | + | chr5.2:20904044-20904063 | MS.gene071482:CDS | 35.0% | |
! | AACACTTCTTTTCCTTTCAG+TGG | + | chr5.2:20902441-20902460 | MS.gene071482:intron | 35.0% |
! | AGATTCCACCTCTATTTTAC+AGG | + | chr5.2:20901305-20901324 | MS.gene071482:intron | 35.0% |
! | AGTTTTGCTCTATTTTCTGC+AGG | + | chr5.2:20902944-20902963 | MS.gene071482:intron | 35.0% |
! | ATTACTTTGGAAGGATTTGG+TGG | + | chr5.2:20904144-20904163 | MS.gene071482:CDS | 35.0% |
! | CAACTCATGTTGGTTACATA+AGG | + | chr5.2:20903350-20903369 | MS.gene071482:intron | 35.0% |
! | CATTAATTTTGTGGGAACAG+TGG | + | chr5.2:20903071-20903090 | MS.gene071482:intron | 35.0% |
! | GATTCCACCTCTATTTTACA+GGG | + | chr5.2:20901306-20901325 | MS.gene071482:intron | 35.0% |
! | GGATTTAAGTTCACTTACTC+AGG | - | chr5.2:20906093-20906112 | None:intergenic | 35.0% |
! | GTTTTGCTCTATTTTCTGCA+GGG | + | chr5.2:20902945-20902964 | MS.gene071482:intron | 35.0% |
! | TCCATTTGCTGAAATGTTCA+AGG | - | chr5.2:20902228-20902247 | None:intergenic | 35.0% |
! | TCTCCAATGCTTCATTTTCT+CGG | - | chr5.2:20902507-20902526 | None:intergenic | 35.0% |
! | TGCCATTTAGTTCAAGAAAG+TGG | - | chr5.2:20902103-20902122 | None:intergenic | 35.0% |
! | TTGTATGATTTTCCCTGGAA+AGG | + | chr5.2:20902543-20902562 | MS.gene071482:intron | 35.0% |
!! | AAAATGAAGCATTGGAGAGT+TGG | + | chr5.2:20902509-20902528 | MS.gene071482:CDS | 35.0% |
!! | AACCAAGGAATTTGATAACG+AGG | + | chr5.2:20904866-20904885 | MS.gene071482:CDS | 35.0% |
!! | ACCATACATAAGAGCATCAA+AGG | + | chr5.2:20906677-20906696 | MS.gene071482:CDS | 35.0% |
!! | ATACATAAGAGCATCAAAGG+TGG | + | chr5.2:20906680-20906699 | MS.gene071482:CDS | 35.0% |
!! | CTTTAGAATGCAGATAGACT+TGG | - | chr5.2:20904209-20904228 | None:intergenic | 35.0% |
!! | CTTTTGATTACTTTGGCTGT+TGG | + | chr5.2:20904086-20904105 | MS.gene071482:intron | 35.0% |
!! | GTAACAATTTTGTTATGCGC+AGG | + | chr5.2:20903123-20903142 | MS.gene071482:intron | 35.0% |
!! | TTTCTCTAAGATTCGAACCA+TGG | - | chr5.2:20903576-20903595 | None:intergenic | 35.0% |
!!! | AAGTTTGATGTTTTGGCTGT+AGG | + | chr5.2:20902182-20902201 | MS.gene071482:CDS | 35.0% |
!!! | AGTTTGATGTTTTGGCTGTA+GGG | + | chr5.2:20902183-20902202 | MS.gene071482:CDS | 35.0% |
!!! | GTAAGTCCTTCCACTTTTTA+GGG | + | chr5.2:20902611-20902630 | MS.gene071482:intron | 35.0% |
!!! | TGTAAGTCCTTCCACTTTTT+AGG | + | chr5.2:20902610-20902629 | MS.gene071482:intron | 35.0% |
AACAGACCCTAAAAAGTGGA+AGG | - | chr5.2:20902620-20902639 | None:intergenic | 40.0% | |
AAGCTTGCATCATATCAGAG+AGG | + | chr5.2:20905348-20905367 | MS.gene071482:intron | 40.0% | |
AATGATATCAGCAAGGAGGA+CGG | - | chr5.2:20903194-20903213 | None:intergenic | 40.0% | |
AATTGTAGATCCTGGCATCA+AGG | + | chr5.2:20906707-20906726 | MS.gene071482:CDS | 40.0% | |
ACACTAGATTGGGATCCTTT+AGG | - | chr5.2:20901743-20901762 | None:intergenic | 40.0% | |
ACACTCTCCCTGTAAAATAG+AGG | - | chr5.2:20901316-20901335 | None:intergenic | 40.0% | |
ACTAGACTCTCTATTGCTCT+CGG | + | chr5.2:20905261-20905280 | MS.gene071482:CDS | 40.0% | |
AGAGCAATAGAGAGTCTAGT+TGG | - | chr5.2:20905261-20905280 | None:intergenic | 40.0% | |
AGCTATACAACATGAGAACC+TGG | + | chr5.2:20905041-20905060 | MS.gene071482:CDS | 40.0% | |
AGGACGTTCTGTAATACACA+GGG | + | chr5.2:20905930-20905949 | MS.gene071482:CDS | 40.0% | |
ATAACGAATCGAACTGGTTG+TGG | - | chr5.2:20903157-20903176 | None:intergenic | 40.0% | |
ATGAAATCCATAGACAGCCT+TGG | + | chr5.2:20906876-20906895 | MS.gene071482:CDS | 40.0% | |
ATGTCATGCATTTGGCAGAA+AGG | - | chr5.2:20901526-20901545 | None:intergenic | 40.0% | |
ATTAAGATCGTCTAGACTCG+AGG | + | chr5.2:20901057-20901076 | MS.gene071482:CDS | 40.0% | |
ATTCATAATCATCGGTCTCG+AGG | - | chr5.2:20902067-20902086 | None:intergenic | 40.0% | |
ATTGTAGATCCTGGCATCAA+GGG | + | chr5.2:20906708-20906727 | MS.gene071482:CDS | 40.0% | |
CAACCGAGAAAATGAAGCAT+TGG | + | chr5.2:20902501-20902520 | MS.gene071482:CDS | 40.0% | |
CAACCGCTACTCAATTGTTA+TGG | + | chr5.2:20906905-20906924 | MS.gene071482:CDS | 40.0% | |
CACTAGATTGGGATCCTTTA+GGG | - | chr5.2:20901742-20901761 | None:intergenic | 40.0% | |
CAGGAAACCTAAAAGGCTTA+GGG | + | chr5.2:20901340-20901359 | MS.gene071482:intron | 40.0% | |
CATAACAATTGAGTAGCGGT+TGG | - | chr5.2:20906907-20906926 | None:intergenic | 40.0% | |
CATGGCCTATATGTTGAGTA+GGG | - | chr5.2:20906792-20906811 | None:intergenic | 40.0% | |
CATTGCTGACATTGAAAGAC+AGG | - | chr5.2:20901956-20901975 | None:intergenic | 40.0% | |
CTCTCAACATAAAGAGACCA+CGG | + | chr5.2:20906537-20906556 | MS.gene071482:CDS | 40.0% | |
CTGAGCTACAATGATCTTGA+TGG | + | chr5.2:20903677-20903696 | MS.gene071482:CDS | 40.0% | |
GACCATTCCTATGATCATGA+TGG | + | chr5.2:20904563-20904582 | MS.gene071482:intron | 40.0% | |
GACTAATCAGATGGTGTGAT+AGG | - | chr5.2:20904989-20905008 | None:intergenic | 40.0% | |
GCATATCTTCACACATTTCC+AGG | + | chr5.2:20905910-20905929 | MS.gene071482:CDS | 40.0% | |
GCCTTGAACATTTCAGCAAA+TGG | + | chr5.2:20902224-20902243 | MS.gene071482:CDS | 40.0% | |
GCTACAATGATCTTGATGGA+CGG | + | chr5.2:20903681-20903700 | MS.gene071482:CDS | 40.0% | |
GGATGCATTAAAGTCCTGTT+TGG | - | chr5.2:20902911-20902930 | None:intergenic | 40.0% | |
GTGATTGGAGCTATTACAAG+TGG | + | chr5.2:20904059-20904078 | MS.gene071482:CDS | 40.0% | |
GTGGATGAAATTGTAGATCC+TGG | + | chr5.2:20906699-20906718 | MS.gene071482:CDS | 40.0% | |
TATATCGGGGTAACAGAACT+AGG | + | chr5.2:20901031-20901050 | MS.gene071482:CDS | 40.0% | |
TATGTATTACAACAGGCGCA+GGG | + | chr5.2:20905461-20905480 | MS.gene071482:intron | 40.0% | |
TCAGCTTCTTCTGCAACTAA+AGG | + | chr5.2:20900436-20900455 | MS.gene071482:CDS | 40.0% | |
TCAGGAAACCTAAAAGGCTT+AGG | + | chr5.2:20901339-20901358 | MS.gene071482:intron | 40.0% | |
TCATCCCATTCAAATTCACG+TGG | - | chr5.2:20906331-20906350 | None:intergenic | 40.0% | |
TCATTACAGTAACCCAGAAG+AGG | - | chr5.2:20905069-20905088 | None:intergenic | 40.0% | |
TCTGCATGTGCACATTTACA+AGG | - | chr5.2:20903289-20903308 | None:intergenic | 40.0% | |
TCTGCTGTAGATGTAGTTGA+AGG | - | chr5.2:20906945-20906964 | None:intergenic | 40.0% | |
TGAGGCTATATTGATCGACA+AGG | + | chr5.2:20905554-20905573 | MS.gene071482:intron | 40.0% | |
TGATAGTTCGGATGTGCTAA+TGG | + | chr5.2:20905656-20905675 | MS.gene071482:intron | 40.0% | |
TGCAGTTCCTCTTACTTCAA+GGG | - | chr5.2:20906058-20906077 | None:intergenic | 40.0% | |
TGCATCATGCACACAGATAT+TGG | - | chr5.2:20903404-20903423 | None:intergenic | 40.0% | |
TGGATTGCAGCCAAAATATC+TGG | - | chr5.2:20903855-20903874 | None:intergenic | 40.0% | |
TGGCTGCAATCCATATATGA+AGG | + | chr5.2:20903862-20903881 | MS.gene071482:CDS | 40.0% | |
TGTCTCTCAGGAAACCTAAA+AGG | + | chr5.2:20901333-20901352 | MS.gene071482:intron | 40.0% | |
TTATGTATTACAACAGGCGC+AGG | + | chr5.2:20905460-20905479 | MS.gene071482:intron | 40.0% | |
TTGAAGTAAGAGGAACTGCA+GGG | + | chr5.2:20906058-20906077 | MS.gene071482:CDS | 40.0% | |
TTGATAGGTGAAGGAGGATT+TGG | + | chr5.2:20904768-20904787 | MS.gene071482:CDS | 40.0% | |
TTGCTGACATTGAAAGACAG+GGG | - | chr5.2:20901954-20901973 | None:intergenic | 40.0% | |
TTTCTCAAAATACGCTCCTC+AGG | + | chr5.2:20906014-20906033 | MS.gene071482:CDS | 40.0% | |
! | AAATGCCTACTTGTTGCCAT+TGG | - | chr5.2:20904180-20904199 | None:intergenic | 40.0% |
! | AATGCCTACTTGTTGCCATT+GGG | - | chr5.2:20904179-20904198 | None:intergenic | 40.0% |
! | ATAACCTTAGTCAAGGCATC+TGG | + | chr5.2:20902257-20902276 | MS.gene071482:CDS | 40.0% |
! | CAGAAGTTTTCTGATTGAGC+AGG | + | chr5.2:20905883-20905902 | MS.gene071482:intron | 40.0% |
! | GTCATCTTGGTGACAAAGTA+AGG | - | chr5.2:20903003-20903022 | None:intergenic | 40.0% |
! | GTTTTCTGATTGAGCAGGTT+TGG | + | chr5.2:20905888-20905907 | MS.gene071482:intron | 40.0% |
! | TGACAAACCCTAAGCCTTTT+AGG | - | chr5.2:20901350-20901369 | None:intergenic | 40.0% |
! | TGTGCTAAGGTTGCAGATTT+TGG | + | chr5.2:20905991-20906010 | MS.gene071482:CDS | 40.0% |
!! | GATATCATGCAGAAGCATTG+TGG | + | chr5.2:20906733-20906752 | MS.gene071482:CDS | 40.0% |
!! | GGATTTGGTTCTGTTTACAG+AGG | + | chr5.2:20904783-20904802 | MS.gene071482:CDS | 40.0% |
!! | GGTTTTGTAGTACCTGCATA+TGG | - | chr5.2:20906444-20906463 | None:intergenic | 40.0% |
!! | TGATGTTTTCAGCTTTGGTG+TGG | + | chr5.2:20906484-20906503 | MS.gene071482:CDS | 40.0% |
!!! | ACTAAGTATTTTGGCTCTCG+TGG | + | chr5.2:20905721-20905740 | MS.gene071482:intron | 40.0% |
AAATCCATAGACAGCCTTGG+AGG | + | chr5.2:20906879-20906898 | MS.gene071482:CDS | 45.0% | |
AAGAAGTGGCAGTGAAAGTG+CGG | + | chr5.2:20904823-20904842 | MS.gene071482:CDS | 45.0% | |
ACATAACTGTCTCCTTCCTG+AGG | - | chr5.2:20906033-20906052 | None:intergenic | 45.0% | |
ACCTGTGACATTTGCCTTGT+AGG | + | chr5.2:20900739-20900758 | MS.gene071482:intron | 45.0% | |
AGATCCAGATGCCTTGACTA+AGG | - | chr5.2:20902264-20902283 | None:intergenic | 45.0% | |
AGGGGAATAACGAATCGAAC+TGG | - | chr5.2:20903163-20903182 | None:intergenic | 45.0% | |
CAAGGCAGTGTAACTGTTCT+TGG | - | chr5.2:20902210-20902229 | None:intergenic | 45.0% | |
CACAGTTATGGGAGATGCAA+AGG | + | chr5.2:20904008-20904027 | MS.gene071482:intron | 45.0% | |
CACTAGTAGCGAAACCATGT+AGG | - | chr5.2:20901206-20901225 | None:intergenic | 45.0% | |
CAGGACGTTCTGTAATACAC+AGG | + | chr5.2:20905929-20905948 | MS.gene071482:CDS | 45.0% | |
CCTGTGACATTTGCCTTGTA+GGG | + | chr5.2:20900740-20900759 | MS.gene071482:intron | 45.0% | |
CGGACAATATCAACCATGCA+TGG | - | chr5.2:20906810-20906829 | None:intergenic | 45.0% | |
CGTGGTCTCTTTATGTTGAG+AGG | - | chr5.2:20906539-20906558 | None:intergenic | 45.0% | |
CTATGCTCTCAAACCCTACA+AGG | - | chr5.2:20900756-20900775 | None:intergenic | 45.0% | |
CTCAACATATAGGCCATGCA+TGG | + | chr5.2:20906794-20906813 | MS.gene071482:CDS | 45.0% | |
CTCTCCCTGTAAAATAGAGG+TGG | - | chr5.2:20901313-20901332 | None:intergenic | 45.0% | |
CTGCAGTTCCTCTTACTTCA+AGG | - | chr5.2:20906059-20906078 | None:intergenic | 45.0% | |
CTGTGTATTACAGAACGTCC+TGG | - | chr5.2:20905931-20905950 | None:intergenic | 45.0% | |
CTTGAAGTAAGAGGAACTGC+AGG | + | chr5.2:20906057-20906076 | MS.gene071482:CDS | 45.0% | |
GAATGCCTATGAAATCCTGC+AGG | + | chr5.2:20902301-20902320 | MS.gene071482:CDS | 45.0% | |
GACATTGAAAGACAGGGGAA+GGG | - | chr5.2:20901949-20901968 | None:intergenic | 45.0% | |
GCATGGCCTATATGTTGAGT+AGG | - | chr5.2:20906793-20906812 | None:intergenic | 45.0% | |
GCTCTAATGCCATGACAGAA+AGG | + | chr5.2:20901831-20901850 | MS.gene071482:intron | 45.0% | |
GCTGACGTTTATCCATATGC+AGG | + | chr5.2:20906429-20906448 | MS.gene071482:intron | 45.0% | |
GCTGTTTGTAGGACTTGTAG+AGG | - | chr5.2:20902005-20902024 | None:intergenic | 45.0% | |
GCTTAGGGTTTGTCACTACT+TGG | + | chr5.2:20901355-20901374 | MS.gene071482:intron | 45.0% | |
GGTGAGTAAGAGCTGTTTGT+AGG | - | chr5.2:20902016-20902035 | None:intergenic | 45.0% | |
GTTTGTAGGACTTGTAGAGG+AGG | - | chr5.2:20902002-20902021 | None:intergenic | 45.0% | |
TCAAAATACGCTCCTCAGGA+AGG | + | chr5.2:20906018-20906037 | MS.gene071482:CDS | 45.0% | |
TCTAGACGATGGTCAAGAAG+TGG | + | chr5.2:20904809-20904828 | MS.gene071482:CDS | 45.0% | |
TGACATTGAAAGACAGGGGA+AGG | - | chr5.2:20901950-20901969 | None:intergenic | 45.0% | |
! | AAGGCATCTGGATCTGAGTT+TGG | + | chr5.2:20902269-20902288 | MS.gene071482:CDS | 45.0% |
! | GACCCTTGTATGATTTTCCC+TGG | + | chr5.2:20902538-20902557 | MS.gene071482:intron | 45.0% |
! | TTGAGGGTGTGTCAAGGTTT+GGG | - | chr5.2:20906982-20907001 | None:intergenic | 45.0% |
!! | AGAAGCATTGTGGAGAGTTG+TGG | + | chr5.2:20906743-20906762 | MS.gene071482:CDS | 45.0% |
!! | GGCAGTGAGATAATGGATTC+TGG | - | chr5.2:20903710-20903729 | None:intergenic | 45.0% |
!!! | GGAGTTTTTAGAGCCACCAA+AGG | + | chr5.2:20901094-20901113 | MS.gene071482:intron | 45.0% |
AATCGAACTGGTTGTGGCTC+AGG | - | chr5.2:20903151-20903170 | None:intergenic | 50.0% | |
ACTCGAGGACTTGGAAATCG+AGG | + | chr5.2:20901072-20901091 | MS.gene071482:CDS | 50.0% | |
ATCGTCTAGACTCGAGGACT+TGG | + | chr5.2:20901063-20901082 | MS.gene071482:CDS | 50.0% | |
CACATCAACTCAGGGAACCA+AGG | + | chr5.2:20904851-20904870 | MS.gene071482:CDS | 50.0% | |
CACTGTCAGAGCAGGACAAA+GGG | + | chr5.2:20902121-20902140 | MS.gene071482:CDS | 50.0% | |
CCCTACAAGGCAAATGTCAC+AGG | - | chr5.2:20900743-20900762 | None:intergenic | 50.0% | |
CCTACCCAATGGCAACAAGT+AGG | + | chr5.2:20904172-20904191 | MS.gene071482:intron | 50.0% | |
CCTATGAAATCCTGCAGGCA+CGG | + | chr5.2:20902306-20902325 | MS.gene071482:CDS | 50.0% | |
CGAGTGGAGCTTGGTTGAAT+GGG | + | chr5.2:20906562-20906581 | MS.gene071482:CDS | 50.0% | |
CGATTGGAGTTCGTCCATGA+TGG | + | chr5.2:20902041-20902060 | MS.gene071482:CDS | 50.0% | |
CGGTCATCCACATCAACTCA+GGG | + | chr5.2:20904843-20904862 | MS.gene071482:CDS | 50.0% | |
CTAAATGGCACTGTCAGAGC+AGG | + | chr5.2:20902113-20902132 | MS.gene071482:CDS | 50.0% | |
CTCGAGGACTTGGAAATCGA+GGG | + | chr5.2:20901073-20901092 | MS.gene071482:CDS | 50.0% | |
GAGGTGTGACACTGTCTTTG+AGG | - | chr5.2:20901983-20902002 | None:intergenic | 50.0% | |
GGATCAGAGCATGTGTGCTA+AGG | + | chr5.2:20905978-20905997 | MS.gene071482:CDS | 50.0% | |
GTTCTCTACGGCACTTCAGT+AGG | + | chr5.2:20903457-20903476 | MS.gene071482:intron | 50.0% | |
TAAAGAGACCACGGATCGAG+TGG | + | chr5.2:20906546-20906565 | MS.gene071482:CDS | 50.0% | |
TCGAGTGGAGCTTGGTTGAA+TGG | + | chr5.2:20906561-20906580 | MS.gene071482:CDS | 50.0% | |
TCTTACTCACCCTGAGCGAT+TGG | + | chr5.2:20902025-20902044 | MS.gene071482:CDS | 50.0% | |
TGATATCCTCCCTTGATGCC+AGG | - | chr5.2:20906720-20906739 | None:intergenic | 50.0% | |
TGGCTCTCGTGGATCTACTT+TGG | + | chr5.2:20905732-20905751 | MS.gene071482:intron | 50.0% | |
TGGTGGAAAGACCTACCCAA+TGG | + | chr5.2:20904161-20904180 | MS.gene071482:CDS | 50.0% | |
! | AAGAGGAACTGCAGGGTATC+TGG | + | chr5.2:20906065-20906084 | MS.gene071482:CDS | 50.0% |
! | CCTACTTGTTGCCATTGGGT+AGG | - | chr5.2:20904175-20904194 | None:intergenic | 50.0% |
! | GGTTGATATTGTCCGCGAGT+TGG | + | chr5.2:20906815-20906834 | MS.gene071482:CDS | 50.0% |
! | GTTGAGGGTGTGTCAAGGTT+TGG | - | chr5.2:20906983-20907002 | None:intergenic | 50.0% |
! | TGATATTGTCCGCGAGTTGG+AGG | + | chr5.2:20906818-20906837 | MS.gene071482:CDS | 50.0% |
!! | CTTGGTTCCCTGAGTTGATG+TGG | - | chr5.2:20904853-20904872 | None:intergenic | 50.0% |
!! | GAAGCATTGGAGAGTTGGAG+TGG | + | chr5.2:20902514-20902533 | MS.gene071482:intron | 50.0% |
!! | TACAGAGGCACTCTAGACGA+TGG | + | chr5.2:20904798-20904817 | MS.gene071482:CDS | 50.0% |
!! | TTACAGGGAGAGTGTCTCTC+AGG | + | chr5.2:20901321-20901340 | MS.gene071482:intron | 50.0% |
AAGGAGGACGGTGGAAACGA+GGG | - | chr5.2:20903182-20903201 | None:intergenic | 55.0% | |
AGTAGCGGTTGGATCCTCCA+AGG | - | chr5.2:20906896-20906915 | None:intergenic | 55.0% | |
CCGTGCCTGCAGGATTTCAT+AGG | - | chr5.2:20902309-20902328 | None:intergenic | 55.0% | |
GAGAACCTGGTGCCTCTTCT+GGG | + | chr5.2:20905054-20905073 | MS.gene071482:CDS | 55.0% | |
GATATCAGCAAGGAGGACGG+TGG | - | chr5.2:20903191-20903210 | None:intergenic | 55.0% | |
GCACTGTCAGAGCAGGACAA+AGG | + | chr5.2:20902120-20902139 | MS.gene071482:CDS | 55.0% | |
GCGGTCATCCACATCAACTC+AGG | + | chr5.2:20904842-20904861 | MS.gene071482:CDS | 55.0% | |
GGACGAACTCCAATCGCTCA+GGG | - | chr5.2:20902037-20902056 | None:intergenic | 55.0% | |
GGATCCTCCAAGGCTGTCTA+TGG | - | chr5.2:20906886-20906905 | None:intergenic | 55.0% | |
GTAGATCCTGGCATCAAGGG+AGG | + | chr5.2:20906711-20906730 | MS.gene071482:CDS | 55.0% | |
TGAGAACCTGGTGCCTCTTC+TGG | + | chr5.2:20905053-20905072 | MS.gene071482:CDS | 55.0% | |
TGGACGAACTCCAATCGCTC+AGG | - | chr5.2:20902038-20902057 | None:intergenic | 55.0% | |
! | TCTCGGTTGAGGGTGTGTCA+AGG | - | chr5.2:20906988-20907007 | None:intergenic | 55.0% |
!! | AGTAACCCAGAAGAGGCACC+AGG | - | chr5.2:20905062-20905081 | None:intergenic | 55.0% |
!! | TGAGAGCATCCTCCAACTCG+CGG | - | chr5.2:20906830-20906849 | None:intergenic | 55.0% |
AAATCCTGCAGGCACGGTCG+TGG | + | chr5.2:20902312-20902331 | MS.gene071482:CDS | 60.0% | |
ACCAAGCTCCACTCGATCCG+TGG | - | chr5.2:20906557-20906576 | None:intergenic | 60.0% | |
ACCACGGATCGAGTGGAGCT+TGG | + | chr5.2:20906553-20906572 | MS.gene071482:CDS | 60.0% | |
AGGAGGACGGTGGAAACGAG+GGG | - | chr5.2:20903181-20903200 | None:intergenic | 60.0% | |
CAAGGAGGACGGTGGAAACG+AGG | - | chr5.2:20903183-20903202 | None:intergenic | 60.0% | |
CATCGGTCTCGAGGCCATCA+TGG | - | chr5.2:20902058-20902077 | None:intergenic | 60.0% | |
GACAGGGGAAGGGCAGATGA+TGG | - | chr5.2:20901939-20901958 | None:intergenic | 60.0% | |
! | ATTGCTCTCGGTGCAGCTCG+AGG | + | chr5.2:20905273-20905292 | MS.gene071482:CDS | 60.0% |
CAATCCACGACCGTGCCTGC+AGG | - | chr5.2:20902319-20902338 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 20900435 | 20907010 | 20900435 | ID=MS.gene071482 |
chr5.2 | mRNA | 20900435 | 20907010 | 20900435 | ID=MS.gene071482.t1;Parent=MS.gene071482 |
chr5.2 | exon | 20900435 | 20900457 | 20900435 | ID=MS.gene071482.t1.exon1;Parent=MS.gene071482.t1 |
chr5.2 | CDS | 20900435 | 20900457 | 20900435 | ID=cds.MS.gene071482.t1;Parent=MS.gene071482.t1 |
chr5.2 | exon | 20900761 | 20900842 | 20900761 | ID=MS.gene071482.t1.exon2;Parent=MS.gene071482.t1 |
chr5.2 | CDS | 20900761 | 20900842 | 20900761 | ID=cds.MS.gene071482.t1;Parent=MS.gene071482.t1 |
chr5.2 | exon | 20900892 | 20901096 | 20900892 | ID=MS.gene071482.t1.exon3;Parent=MS.gene071482.t1 |
chr5.2 | CDS | 20900892 | 20901096 | 20900892 | ID=cds.MS.gene071482.t1;Parent=MS.gene071482.t1 |
chr5.2 | exon | 20901147 | 20901277 | 20901147 | ID=MS.gene071482.t1.exon4;Parent=MS.gene071482.t1 |
chr5.2 | CDS | 20901147 | 20901277 | 20901147 | ID=cds.MS.gene071482.t1;Parent=MS.gene071482.t1 |
chr5.2 | exon | 20901884 | 20902359 | 20901884 | ID=MS.gene071482.t1.exon5;Parent=MS.gene071482.t1 |
chr5.2 | CDS | 20901884 | 20902359 | 20901884 | ID=cds.MS.gene071482.t1;Parent=MS.gene071482.t1 |
chr5.2 | exon | 20902461 | 20902532 | 20902461 | ID=MS.gene071482.t1.exon6;Parent=MS.gene071482.t1 |
chr5.2 | CDS | 20902461 | 20902532 | 20902461 | ID=cds.MS.gene071482.t1;Parent=MS.gene071482.t1 |
chr5.2 | exon | 20902565 | 20902610 | 20902565 | ID=MS.gene071482.t1.exon7;Parent=MS.gene071482.t1 |
chr5.2 | CDS | 20902565 | 20902610 | 20902565 | ID=cds.MS.gene071482.t1;Parent=MS.gene071482.t1 |
chr5.2 | exon | 20902966 | 20903037 | 20902966 | ID=MS.gene071482.t1.exon8;Parent=MS.gene071482.t1 |
chr5.2 | CDS | 20902966 | 20903037 | 20902966 | ID=cds.MS.gene071482.t1;Parent=MS.gene071482.t1 |
chr5.2 | exon | 20903145 | 20903213 | 20903145 | ID=MS.gene071482.t1.exon9;Parent=MS.gene071482.t1 |
chr5.2 | CDS | 20903145 | 20903213 | 20903145 | ID=cds.MS.gene071482.t1;Parent=MS.gene071482.t1 |
chr5.2 | exon | 20903673 | 20903744 | 20903673 | ID=MS.gene071482.t1.exon10;Parent=MS.gene071482.t1 |
chr5.2 | CDS | 20903673 | 20903744 | 20903673 | ID=cds.MS.gene071482.t1;Parent=MS.gene071482.t1 |
chr5.2 | exon | 20903856 | 20903927 | 20903856 | ID=MS.gene071482.t1.exon11;Parent=MS.gene071482.t1 |
chr5.2 | CDS | 20903856 | 20903927 | 20903856 | ID=cds.MS.gene071482.t1;Parent=MS.gene071482.t1 |
chr5.2 | exon | 20904013 | 20904103 | 20904013 | ID=MS.gene071482.t1.exon12;Parent=MS.gene071482.t1 |
chr5.2 | CDS | 20904013 | 20904103 | 20904013 | ID=cds.MS.gene071482.t1;Parent=MS.gene071482.t1 |
chr5.2 | exon | 20904141 | 20904189 | 20904141 | ID=MS.gene071482.t1.exon13;Parent=MS.gene071482.t1 |
chr5.2 | CDS | 20904141 | 20904189 | 20904141 | ID=cds.MS.gene071482.t1;Parent=MS.gene071482.t1 |
chr5.2 | exon | 20904661 | 20904887 | 20904661 | ID=MS.gene071482.t1.exon14;Parent=MS.gene071482.t1 |
chr5.2 | CDS | 20904661 | 20904887 | 20904661 | ID=cds.MS.gene071482.t1;Parent=MS.gene071482.t1 |
chr5.2 | exon | 20905027 | 20905153 | 20905027 | ID=MS.gene071482.t1.exon15;Parent=MS.gene071482.t1 |
chr5.2 | CDS | 20905027 | 20905153 | 20905027 | ID=cds.MS.gene071482.t1;Parent=MS.gene071482.t1 |
chr5.2 | exon | 20905226 | 20905294 | 20905226 | ID=MS.gene071482.t1.exon16;Parent=MS.gene071482.t1 |
chr5.2 | CDS | 20905226 | 20905294 | 20905226 | ID=cds.MS.gene071482.t1;Parent=MS.gene071482.t1 |
chr5.2 | exon | 20905905 | 20906094 | 20905905 | ID=MS.gene071482.t1.exon17;Parent=MS.gene071482.t1 |
chr5.2 | CDS | 20905905 | 20906094 | 20905905 | ID=cds.MS.gene071482.t1;Parent=MS.gene071482.t1 |
chr5.2 | exon | 20906451 | 20906583 | 20906451 | ID=MS.gene071482.t1.exon18;Parent=MS.gene071482.t1 |
chr5.2 | CDS | 20906451 | 20906583 | 20906451 | ID=cds.MS.gene071482.t1;Parent=MS.gene071482.t1 |
chr5.2 | exon | 20906672 | 20907010 | 20906672 | ID=MS.gene071482.t1.exon19;Parent=MS.gene071482.t1 |
chr5.2 | CDS | 20906672 | 20907010 | 20906672 | ID=cds.MS.gene071482.t1;Parent=MS.gene071482.t1 |
Gene Sequence |
Protein sequence |