Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073006.t1 | AES73782.1 | 100 | 357 | 0 | 0 | 1 | 357 | 1 | 357 | 1.70E-203 | 718.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073006.t1 | Q8LAZ7 | 84.5 | 355 | 50 | 3 | 7 | 357 | 4 | 357 | 2.7e-170 | 599.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073006.t1 | G7JCC9 | 100.0 | 357 | 0 | 0 | 1 | 357 | 1 | 357 | 1.2e-203 | 718.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene85661 | MS.gene073006 | PPI |
| MS.gene073006 | MS.gene85661 | PPI |
| MS.gene030686 | MS.gene073006 | PPI |
| MS.gene28454 | MS.gene073006 | PPI |
| MS.gene79126 | MS.gene073006 | PPI |
| MS.gene70283 | MS.gene073006 | PPI |
| MS.gene030685 | MS.gene073006 | PPI |
| MS.gene067039 | MS.gene073006 | PPI |
| MS.gene70282 | MS.gene073006 | PPI |
| MS.gene58136 | MS.gene073006 | PPI |
| MS.gene58134 | MS.gene073006 | PPI |
| MS.gene75567 | MS.gene073006 | PPI |
| MS.gene28183 | MS.gene073006 | PPI |
| MS.gene014733 | MS.gene073006 | PPI |
| MS.gene33131 | MS.gene073006 | PPI |
| MS.gene045227 | MS.gene073006 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073006.t1 | MTR_3g108790 | 100.000 | 357 | 0 | 0 | 1 | 357 | 1 | 357 | 0.0 | 746 |
| MS.gene073006.t1 | MTR_8g006650 | 93.421 | 76 | 5 | 0 | 282 | 357 | 2 | 77 | 4.82e-44 | 147 |
| MS.gene073006.t1 | MTR_2g017680 | 42.029 | 207 | 107 | 9 | 58 | 256 | 29 | 230 | 5.05e-38 | 138 |
| MS.gene073006.t1 | MTR_1g019930 | 42.029 | 207 | 107 | 9 | 58 | 256 | 33 | 234 | 5.14e-38 | 138 |
| MS.gene073006.t1 | MTR_8g006645 | 94.828 | 58 | 3 | 0 | 300 | 357 | 90 | 147 | 3.52e-30 | 113 |
| MS.gene073006.t1 | MTR_8g006640 | 100.000 | 28 | 0 | 0 | 132 | 159 | 33 | 60 | 1.45e-15 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073006.t1 | AT1G22920 | 84.507 | 355 | 50 | 3 | 7 | 357 | 4 | 357 | 0.0 | 595 |
| MS.gene073006.t1 | AT1G71230 | 82.720 | 353 | 57 | 3 | 7 | 355 | 4 | 356 | 0.0 | 582 |
| MS.gene073006.t1 | AT1G22920 | 85.714 | 329 | 42 | 3 | 7 | 331 | 4 | 331 | 0.0 | 558 |
| MS.gene073006.t1 | AT1G71230 | 71.429 | 84 | 22 | 1 | 7 | 88 | 4 | 87 | 9.91e-39 | 133 |
| MS.gene073006.t1 | AT5G23540 | 42.029 | 207 | 107 | 9 | 58 | 256 | 28 | 229 | 2.67e-38 | 139 |
| MS.gene073006.t1 | AT5G23540 | 40.541 | 185 | 97 | 9 | 80 | 256 | 1 | 180 | 1.26e-30 | 117 |
Find 82 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTATGGTTGCTGGCTTTC+TGG | 0.019953 | 3.4:+94207339 | MS.gene073006:CDS |
| ACTTTCATCTTCTCCTTTAT+TGG | 0.129137 | 3.4:+94207754 | MS.gene073006:CDS |
| CTTAATAAGATTGAAGATTT+TGG | 0.150257 | 3.4:+94207537 | MS.gene073006:CDS |
| TCACTCACTTCTTTCTTTCT+AGG | 0.165471 | 3.4:-94208013 | None:intergenic |
| TTCTCTTGATTCACACCTTT+TGG | 0.168423 | 3.4:+94207700 | MS.gene073006:CDS |
| CACATCCTGGTTATGGTTGC+TGG | 0.217349 | 3.4:+94207331 | MS.gene073006:CDS |
| CAACTTTCAATCATTGGTTC+AGG | 0.253740 | 3.4:-94210263 | None:intergenic |
| ATCTTCTGTGGAACAAATAT+TGG | 0.263054 | 3.4:+94207723 | MS.gene073006:CDS |
| ATGGTTGTTCACGCGCGTTC+TGG | 0.288201 | 3.4:+94206362 | MS.gene073006:CDS |
| CTTTCATCTTCTCCTTTATT+GGG | 0.292334 | 3.4:+94207755 | MS.gene073006:CDS |
| CAAAATCAACTTTCAATCAT+TGG | 0.293926 | 3.4:-94210269 | None:intergenic |
| GCTGGACAAATCTCGGATTT+AGG | 0.296056 | 3.4:+94207794 | MS.gene073006:CDS |
| AATTGGCACACTCGCGTTTC+GGG | 0.311696 | 3.4:+94207972 | MS.gene073006:CDS |
| GTTATGGTTGCTGGCTTTCT+GGG | 0.313990 | 3.4:+94207340 | MS.gene073006:CDS |
| AAGTGGAGATTGGGGCCTTC+AGG | 0.317098 | 3.4:+94207454 | MS.gene073006:CDS |
| CTGCTGGGAAAGTGGAGATT+GGG | 0.317739 | 3.4:+94207445 | MS.gene073006:CDS |
| GATGTTGAATCAGCAATTTC+AGG | 0.320865 | 3.4:+94207380 | MS.gene073006:CDS |
| TGGCTTATCGCGTTGGAATT+CGG | 0.334958 | 3.4:-94206279 | None:intergenic |
| CAATTGGCACACTCGCGTTT+CGG | 0.340334 | 3.4:+94207971 | MS.gene073006:CDS |
| ATAGTTTGATACTCAGAAAT+AGG | 0.343139 | 3.4:-94207510 | None:intergenic |
| TCAGCAGGCTTATAACCTTC+AGG | 0.347284 | 3.4:-94207483 | None:intergenic |
| TATCATTCACATCCTGGTTA+TGG | 0.365703 | 3.4:+94207324 | MS.gene073006:CDS |
| TAGTCTCCATTGCCCAATAA+AGG | 0.383654 | 3.4:-94207767 | None:intergenic |
| TCTGCTGGGAAAGTGGAGAT+TGG | 0.394695 | 3.4:+94207444 | MS.gene073006:CDS |
| CTTGATGAACAGAGTTGAAC+AGG | 0.395941 | 3.4:-94210211 | None:intergenic |
| AAATCTTCAATCTTATTAAG+AGG | 0.397996 | 3.4:-94207534 | None:intergenic |
| TGGTGGAACAATCGAAGTTA+TGG | 0.402025 | 3.4:+94206382 | MS.gene073006:CDS |
| CCAGCAGAAACAGTTCTTGT+CGG | 0.420083 | 3.4:-94207429 | None:intergenic |
| TGCTGATTCCATCATCGTTA+TGG | 0.425530 | 3.4:+94206427 | MS.gene073006:CDS |
| CGAGTTTCAGTACCTTCAAC+AGG | 0.455152 | 3.4:-94206464 | None:intergenic |
| AACTGTTTCTGCTGGGAAAG+TGG | 0.456029 | 3.4:+94207437 | MS.gene073006:CDS |
| GGTGGAACAATCGAAGTTAT+GGG | 0.457084 | 3.4:+94206383 | MS.gene073006:CDS |
| TTGTTGGATGCAGGTAATCA+AGG | 0.461466 | 3.4:+94210184 | MS.gene073006:intron |
| CCGACAAGAACTGTTTCTGC+TGG | 0.464062 | 3.4:+94207429 | MS.gene073006:CDS |
| CGTCTGAAGGAGTTTCCATT+GGG | 0.464772 | 3.4:-94206223 | None:intergenic |
| ACAAAGACGAACCTGTTTGT+TGG | 0.470842 | 3.4:-94206537 | None:intergenic |
| TCGCCCATGGCTTATCGCGT+TGG | 0.472321 | 3.4:-94206286 | None:intergenic |
| TCTTCTCCTTTATTGGGCAA+TGG | 0.485148 | 3.4:+94207761 | MS.gene073006:CDS |
| ACTTCTTTCTTTCTAGGTGT+AGG | 0.490673 | 3.4:-94208007 | None:intergenic |
| CTATGTAGCTGGACAAATCT+CGG | 0.498092 | 3.4:+94207787 | MS.gene073006:CDS |
| CAGCAGGCTTATAACCTTCA+GGG | 0.500444 | 3.4:-94207482 | None:intergenic |
| TGCACTCGCTCTTCTCAAGA+TGG | 0.503881 | 3.4:+94206343 | MS.gene073006:CDS |
| TCTTCTGTGGAACAAATATT+GGG | 0.505161 | 3.4:+94207724 | MS.gene073006:CDS |
| TTATTCTCAGACCAACAAAC+AGG | 0.505190 | 3.4:+94206526 | MS.gene073006:CDS |
| AACTTTCAATCATTGGTTCA+GGG | 0.506922 | 3.4:-94210262 | None:intergenic |
| GGCAATGGAGACTATGTAGC+TGG | 0.507362 | 3.4:+94207776 | MS.gene073006:CDS |
| CAGCGATAGCACAACAAACA+TGG | 0.519296 | 3.4:+94206180 | MS.gene073006:CDS |
| AAAAGCATCCATAACGATGA+TGG | 0.520346 | 3.4:-94206435 | None:intergenic |
| GTTGTTCACGCGCGTTCTGG+TGG | 0.524621 | 3.4:+94206365 | MS.gene073006:CDS |
| GTGTGTGTAGGCTGGGAGGT+TGG | 0.525878 | 3.4:+94207284 | MS.gene073006:intron |
| TCGTCTGAAGGAGTTTCCAT+TGG | 0.528372 | 3.4:-94206224 | None:intergenic |
| AATTCCAACGCGATAAGCCA+TGG | 0.531498 | 3.4:+94206282 | MS.gene073006:CDS |
| AGAACAAGCAGAGAATCAAT+TGG | 0.538558 | 3.4:+94207955 | MS.gene073006:CDS |
| ACACTCGCGTTTCGGGCCAC+TGG | 0.541532 | 3.4:+94207979 | MS.gene073006:CDS |
| AGCTGATGCTTATGAATACA+TGG | 0.546058 | 3.4:+94206499 | MS.gene073006:CDS |
| GGATGGTATCATTCACATCC+TGG | 0.547109 | 3.4:+94207318 | MS.gene073006:CDS |
| TGCTGGGAAAGTGGAGATTG+GGG | 0.547636 | 3.4:+94207446 | MS.gene073006:CDS |
| CTTGTCCTGCTTCGTCGTAG+TGG | 0.547793 | 3.4:-94206256 | None:intergenic |
| ATCTTCCACTACGACGAAGC+AGG | 0.552852 | 3.4:+94206251 | MS.gene073006:CDS |
| GGTTGGAGAATGTCGTGGGA+TGG | 0.560107 | 3.4:+94207301 | MS.gene073006:CDS |
| AGTGCATGGTTTAATGTCAC+AGG | 0.563487 | 3.4:+94210079 | MS.gene073006:CDS |
| CGACAAGAACTGTTTCTGCT+GGG | 0.564055 | 3.4:+94207430 | MS.gene073006:CDS |
| GAAAGCCAGCAACCATAACC+AGG | 0.566264 | 3.4:-94207336 | None:intergenic |
| GGGAGGTTGGAGAATGTCGT+GGG | 0.567445 | 3.4:+94207297 | MS.gene073006:CDS |
| TGTTCCACAGAAGATCCAAA+AGG | 0.567458 | 3.4:-94207715 | None:intergenic |
| ACCTTCAGGGTAAGTCCTGA+AGG | 0.577000 | 3.4:-94207469 | None:intergenic |
| GAAGTTATGGGTCTTATGCA+AGG | 0.593430 | 3.4:+94206395 | MS.gene073006:CDS |
| ATAACTGTTGAACAAGTGCA+TGG | 0.600293 | 3.4:+94210065 | MS.gene073006:CDS |
| TAGTGAGGATCGTTCGCCCA+TGG | 0.605646 | 3.4:-94206299 | None:intergenic |
| TCAGAAATAGGATCATCAGC+AGG | 0.608578 | 3.4:-94207498 | None:intergenic |
| TCACGAGTGATCTTAGCAAG+TGG | 0.611123 | 3.4:-94210032 | None:intergenic |
| ATTCCAACGCGATAAGCCAT+GGG | 0.616421 | 3.4:+94206283 | MS.gene073006:CDS |
| TGGGAGGTTGGAGAATGTCG+TGG | 0.620298 | 3.4:+94207296 | MS.gene073006:CDS |
| GCCTTCAGGACTTACCCTGA+AGG | 0.623505 | 3.4:+94207468 | MS.gene073006:CDS |
| TGGAAGATTGAATCGTCTGA+AGG | 0.625354 | 3.4:-94206236 | None:intergenic |
| AGAGAACAACATAATCCCAA+TGG | 0.625568 | 3.4:+94206208 | MS.gene073006:CDS |
| GAATAGAAACCTGTTTACAA+TGG | 0.626299 | 3.4:-94207563 | None:intergenic |
| CTTAAAGTAAGTGATATCCA+AGG | 0.627727 | 3.4:-94207675 | None:intergenic |
| ATTTGTGTGTGTAGGCTGGG+AGG | 0.631889 | 3.4:+94207280 | MS.gene073006:intron |
| AGCGATAGCACAACAAACAT+GGG | 0.650776 | 3.4:+94206181 | MS.gene073006:CDS |
| CTAGGTGTAGGTGCTACCAG+TGG | 0.656542 | 3.4:-94207995 | None:intergenic |
| TTGACACGCTTGAAGTAGTG+AGG | 0.659789 | 3.4:-94206314 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATCAAAATTGTAATT+AGG | - | chr3.4:94207075-94207094 | None:intergenic | 10.0% |
| !! | AAAAATCAAAATTGTAATTA+GGG | - | chr3.4:94206692-94206711 | None:intergenic | 10.0% |
| !! | AAAAATCAATATTGTAATTA+GGG | - | chr3.4:94207173-94207192 | None:intergenic | 10.0% |
| !!! | TTTAAGATATTAGAATTTAA+AGG | - | chr3.4:94209406-94209425 | None:intergenic | 10.0% |
| !! | AAATAAGTTCAATAAGATTT+GGG | - | chr3.4:94206780-94206799 | None:intergenic | 15.0% |
| !! | AATTATCGCATAAAAAATAA+TGG | - | chr3.4:94207832-94207851 | None:intergenic | 15.0% |
| !! | ATCAAATATATTGTATCATT+TGG | - | chr3.4:94206899-94206918 | None:intergenic | 15.0% |
| !! | GAAAAATCAAAATTGTAATT+AGG | - | chr3.4:94206693-94206712 | None:intergenic | 15.0% |
| !! | GAAAAATCAATATTGTAATT+AGG | - | chr3.4:94207174-94207193 | None:intergenic | 15.0% |
| !! | TAAATAAGTTCAATAAGATT+TGG | - | chr3.4:94206781-94206800 | None:intergenic | 15.0% |
| !! | TAATTATGAATATCTCAATT+GGG | + | chr3.4:94207904-94207923 | MS.gene073006:intron | 15.0% |
| !!! | TAGATAAATGTTTTTTAGTT+CGG | + | chr3.4:94209856-94209875 | MS.gene073006:intron | 15.0% |
| !!! | TTGTTTGACTTTTTTTTATT+GGG | + | chr3.4:94208888-94208907 | MS.gene073006:intron | 15.0% |
| !!! | TTTCTAACATCAAAATATTT+TGG | + | chr3.4:94208848-94208867 | MS.gene073006:intron | 15.0% |
| !! | AAAAATCACAATTGTAATCA+GGG | - | chr3.4:94207111-94207130 | None:intergenic | 20.0% |
| !! | AAATCTTCAATCTTATTAAG+AGG | - | chr3.4:94207537-94207556 | None:intergenic | 20.0% |
| !! | AAGAAAGTAAAGTACAATTT+AGG | - | chr3.4:94209451-94209470 | None:intergenic | 20.0% |
| !! | ATGTTGATGTTAGAAAATAT+TGG | - | chr3.4:94208770-94208789 | None:intergenic | 20.0% |
| !! | CAAAATCACAGTTATAATTA+GGG | - | chr3.4:94207245-94207264 | None:intergenic | 20.0% |
| !! | CCAAAATAAAGAAGTTAAAA+AGG | - | chr3.4:94208817-94208836 | None:intergenic | 20.0% |
| !! | GAAGATAAACAGATAAATAA+TGG | - | chr3.4:94208637-94208656 | None:intergenic | 20.0% |
| !! | GTAATTATGAATATCTCAAT+TGG | + | chr3.4:94207903-94207922 | MS.gene073006:intron | 20.0% |
| !! | TATCTTAAAAAAACAGTCAT+TGG | + | chr3.4:94209417-94209436 | MS.gene073006:intron | 20.0% |
| !! | TATGTTAAGAAAACAATAGT+GGG | + | chr3.4:94208365-94208384 | MS.gene073006:intron | 20.0% |
| !! | TCAAAATCACAGTTATAATT+AGG | - | chr3.4:94207246-94207265 | None:intergenic | 20.0% |
| !! | TTACAAAATATAACATTGAC+AGG | - | chr3.4:94207887-94207906 | None:intergenic | 20.0% |
| !! | TTATGTTAAGAAAACAATAG+TGG | + | chr3.4:94208364-94208383 | MS.gene073006:intron | 20.0% |
| !!! | AAAAAGTGTTAAGTTTTGTT+GGG | + | chr3.4:94208441-94208460 | MS.gene073006:intron | 20.0% |
| !!! | ACTTTTTGTTCATAAATGTT+TGG | + | chr3.4:94208297-94208316 | MS.gene073006:intron | 20.0% |
| !!! | ATATTTTTTCTCTTTTTGGT+AGG | - | chr3.4:94210124-94210143 | None:intergenic | 20.0% |
| !!! | CCTTTTTAACTTCTTTATTT+TGG | + | chr3.4:94208814-94208833 | MS.gene073006:intron | 20.0% |
| !!! | CTGTTGTTTAAAACTTTTTA+GGG | - | chr3.4:94206723-94206742 | None:intergenic | 20.0% |
| !!! | CTTAATAAGATTGAAGATTT+TGG | + | chr3.4:94207537-94207556 | MS.gene073006:CDS | 20.0% |
| !!! | GGATAGAATATGATTTTTTA+GGG | - | chr3.4:94209022-94209041 | None:intergenic | 20.0% |
| !!! | GTTGTTTGACTTTTTTTTAT+TGG | + | chr3.4:94208887-94208906 | MS.gene073006:intron | 20.0% |
| !!! | TAAAAAGTGTTAAGTTTTGT+TGG | + | chr3.4:94208440-94208459 | MS.gene073006:intron | 20.0% |
| !!! | TAAAACTTTTTAGGGTTTAA+GGG | - | chr3.4:94206715-94206734 | None:intergenic | 20.0% |
| !!! | TCACATATTTTTTCTCTTTT+TGG | - | chr3.4:94210128-94210147 | None:intergenic | 20.0% |
| !!! | TGGATAGAATATGATTTTTT+AGG | - | chr3.4:94209023-94209042 | None:intergenic | 20.0% |
| !!! | TGTTTGACTTTTTTTTATTG+GGG | + | chr3.4:94208889-94208908 | MS.gene073006:intron | 20.0% |
| !!! | TTAAAACTTTTTAGGGTTTA+AGG | - | chr3.4:94206716-94206735 | None:intergenic | 20.0% |
| !!! | TTTTATGCGATAATTTGTTT+TGG | + | chr3.4:94207837-94207856 | MS.gene073006:intron | 20.0% |
| !!! | TTTTCTAACATCAACATAAT+AGG | + | chr3.4:94208773-94208792 | MS.gene073006:intron | 20.0% |
| !!! | TTTTTTTCAGTATTATTCCT+TGG | + | chr3.4:94207658-94207677 | MS.gene073006:intron | 20.0% |
| ! | AAATTCAGAGAAAACTAATC+AGG | - | chr3.4:94209542-94209561 | None:intergenic | 25.0% |
| ! | AATATACTCTAATTAGGGTT+AGG | - | chr3.4:94206591-94206610 | None:intergenic | 25.0% |
| ! | AATGTACTCTGTCTAATTAT+TGG | + | chr3.4:94208059-94208078 | MS.gene073006:intron | 25.0% |
| ! | ACAAAAAACAAGAGTTTGTA+GGG | - | chr3.4:94207611-94207630 | None:intergenic | 25.0% |
| ! | AGATATACATATCTAGTCAT+TGG | + | chr3.4:94208227-94208246 | MS.gene073006:intron | 25.0% |
| ! | AGGACAGTTACAATTATAAA+AGG | + | chr3.4:94209348-94209367 | MS.gene073006:intron | 25.0% |
| ! | ATAGTTTGATACTCAGAAAT+AGG | - | chr3.4:94207513-94207532 | None:intergenic | 25.0% |
| ! | ATATACTCTAATTAGGGTTA+GGG | - | chr3.4:94206590-94206609 | None:intergenic | 25.0% |
| ! | ATTGTACTTTACTTTCTTCA+TGG | + | chr3.4:94209453-94209472 | MS.gene073006:intron | 25.0% |
| ! | CAAAATTGTAATTAGGGTTA+GGG | - | chr3.4:94206686-94206705 | None:intergenic | 25.0% |
| ! | CAATATTGTAATTAGGGTTA+GGG | - | chr3.4:94207167-94207186 | None:intergenic | 25.0% |
| ! | CACACAAATATCAACTAATT+AGG | - | chr3.4:94207269-94207288 | None:intergenic | 25.0% |
| ! | GAAAAATCACAATTGTAATC+AGG | - | chr3.4:94207112-94207131 | None:intergenic | 25.0% |
| ! | GGCAAAATATACTCTAATTA+GGG | - | chr3.4:94206596-94206615 | None:intergenic | 25.0% |
| ! | TACAAAAAACAAGAGTTTGT+AGG | - | chr3.4:94207612-94207631 | None:intergenic | 25.0% |
| ! | TAGTGATAGATAACATCAAA+TGG | - | chr3.4:94209952-94209971 | None:intergenic | 25.0% |
| ! | TCAAAATTGTAATTAGGGTT+AGG | - | chr3.4:94206687-94206706 | None:intergenic | 25.0% |
| ! | TCAATATTGTAATTAGGGTT+AGG | - | chr3.4:94207168-94207187 | None:intergenic | 25.0% |
| ! | TCTAGATGGCTAAAATATTA+CGG | + | chr3.4:94210155-94210174 | MS.gene073006:intron | 25.0% |
| ! | TCTGTTAAAACAGAGAAAAA+CGG | + | chr3.4:94206979-94206998 | MS.gene073006:intron | 25.0% |
| ! | TTATCTATATCTGTTCGTAA+TGG | - | chr3.4:94209843-94209862 | None:intergenic | 25.0% |
| !! | AATATTACGGTGAATTTTGT+TGG | + | chr3.4:94210168-94210187 | MS.gene073006:intron | 25.0% |
| !! | ATTTAGTGTTTCTGTAATCT+GGG | + | chr3.4:94208658-94208677 | MS.gene073006:intron | 25.0% |
| !! | TATGAACAAAAAGTATACTG+TGG | - | chr3.4:94208291-94208310 | None:intergenic | 25.0% |
| !! | TGTAACTGTCCTTTTATAAT+AGG | - | chr3.4:94209340-94209359 | None:intergenic | 25.0% |
| !! | TTGCAGTTATCTTTTACTTT+TGG | + | chr3.4:94208589-94208608 | MS.gene073006:intron | 25.0% |
| !!! | ACTTTTTTTTATTGGGGAAT+GGG | + | chr3.4:94208895-94208914 | MS.gene073006:intron | 25.0% |
| !!! | CCTAAAAAGTTTTAAACAAC+AGG | + | chr3.4:94206721-94206740 | MS.gene073006:intron | 25.0% |
| !!! | CCTGTTGTTTAAAACTTTTT+AGG | - | chr3.4:94206724-94206743 | None:intergenic | 25.0% |
| !!! | GAATATGATTTTTTAGGGTT+TGG | - | chr3.4:94209017-94209036 | None:intergenic | 25.0% |
| AACAGAGTGAACAAAAATCA+CGG | - | chr3.4:94206965-94206984 | None:intergenic | 30.0% | |
| ACTTTCATCTTCTCCTTTAT+TGG | + | chr3.4:94207754-94207773 | MS.gene073006:CDS | 30.0% | |
| AGAAGTTAAAAAGGAGACAT+AGG | - | chr3.4:94208808-94208827 | None:intergenic | 30.0% | |
| AGGTACAATAAACAAGTAGA+GGG | - | chr3.4:94209522-94209541 | None:intergenic | 30.0% | |
| ATAATTAGGGTTAGGGTTAA+AGG | - | chr3.4:94207232-94207251 | None:intergenic | 30.0% | |
| ATCACATTTGTAATCAGTGT+TGG | - | chr3.4:94207204-94207223 | None:intergenic | 30.0% | |
| ATCTTCTGTGGAACAAATAT+TGG | + | chr3.4:94207723-94207742 | MS.gene073006:CDS | 30.0% | |
| CACAGTTATAATTAGGGTTA+GGG | - | chr3.4:94207239-94207258 | None:intergenic | 30.0% | |
| CAGATTACAGAAACACTAAA+TGG | - | chr3.4:94208659-94208678 | None:intergenic | 30.0% | |
| CATGGCTGAATATTATAAAC+AGG | - | chr3.4:94208262-94208281 | None:intergenic | 30.0% | |
| CTCTAAACAAAAACACAACA+TGG | - | chr3.4:94209274-94209293 | None:intergenic | 30.0% | |
| CTTAAAGTAAGTGATATCCA+AGG | - | chr3.4:94207678-94207697 | None:intergenic | 30.0% | |
| CTTTCATCTTCTCCTTTATT+GGG | + | chr3.4:94207755-94207774 | MS.gene073006:CDS | 30.0% | |
| GAATAGAAACCTGTTTACAA+TGG | - | chr3.4:94207566-94207585 | None:intergenic | 30.0% | |
| GGGCAAAATATACTCTAATT+AGG | - | chr3.4:94206597-94206616 | None:intergenic | 30.0% | |
| GGTTTACGGGATTATAATTA+CGG | - | chr3.4:94206630-94206649 | None:intergenic | 30.0% | |
| GTGCAAAATATCAACTGATA+AGG | - | chr3.4:94207134-94207153 | None:intergenic | 30.0% | |
| TAATATGAGAGAATGTGTGA+TGG | - | chr3.4:94209686-94209705 | None:intergenic | 30.0% | |
| TAATTAGGGTTAGGGTTTAA+GGG | - | chr3.4:94206678-94206697 | None:intergenic | 30.0% | |
| TATAATAGGAACCAATGGAT+GGG | - | chr3.4:94209326-94209345 | None:intergenic | 30.0% | |
| TATAATTACGGCAGCTAATT+GGG | - | chr3.4:94206618-94206637 | None:intergenic | 30.0% | |
| TCACAGTTATAATTAGGGTT+AGG | - | chr3.4:94207240-94207259 | None:intergenic | 30.0% | |
| TCTTCTGTGGAACAAATATT+GGG | + | chr3.4:94207724-94207743 | MS.gene073006:CDS | 30.0% | |
| TCTTTATTGAGAGTTTCAGA+TGG | + | chr3.4:94208086-94208105 | MS.gene073006:intron | 30.0% | |
| TTATAATAGGAACCAATGGA+TGG | - | chr3.4:94209327-94209346 | None:intergenic | 30.0% | |
| TTATAATTACGGCAGCTAAT+TGG | - | chr3.4:94206619-94206638 | None:intergenic | 30.0% | |
| TTCCTAAAATCACGTTACAA+TGG | - | chr3.4:94209043-94209062 | None:intergenic | 30.0% | |
| ! | AGTAAATCTAAGATGACATG+AGG | - | chr3.4:94209593-94209612 | None:intergenic | 30.0% |
| ! | ATCCATTGTAACGTGATTTT+AGG | + | chr3.4:94209038-94209057 | MS.gene073006:intron | 30.0% |
| ! | ATCTTTTGGCGTTAGTTATA+TGG | + | chr3.4:94208507-94208526 | MS.gene073006:intron | 30.0% |
| ! | CAAATTCTCAAATGATTTGC+AGG | + | chr3.4:94210001-94210020 | MS.gene073006:intron | 30.0% |
| ! | CATTTAGTGTTTCTGTAATC+TGG | + | chr3.4:94208657-94208676 | MS.gene073006:intron | 30.0% |
| ! | CCTTTTATAATAGGAACCAA+TGG | - | chr3.4:94209331-94209350 | None:intergenic | 30.0% |
| ! | TAGTTGATATTTGTGTGTGT+AGG | + | chr3.4:94207272-94207291 | MS.gene073006:intron | 30.0% |
| ! | TTTGGATGCATGCTATTTAT+TGG | - | chr3.4:94208999-94209018 | None:intergenic | 30.0% |
| ! | TTTTGTTGGGATGAAATAGA+GGG | + | chr3.4:94208454-94208473 | MS.gene073006:intron | 30.0% |
| !! | AACTTTCAATCATTGGTTCA+GGG | - | chr3.4:94210265-94210284 | None:intergenic | 30.0% |
| !! | CCATTGGTTCCTATTATAAA+AGG | + | chr3.4:94209328-94209347 | MS.gene073006:intron | 30.0% |
| !! | GTATCTTTTGGAGAATCTTT+TGG | + | chr3.4:94208493-94208512 | MS.gene073006:intron | 30.0% |
| !! | TGTAATCAGTGTTGGTTTAA+GGG | - | chr3.4:94207196-94207215 | None:intergenic | 30.0% |
| !! | TGTTGTGTTTTTGTTTAGAG+AGG | + | chr3.4:94209274-94209293 | MS.gene073006:intron | 30.0% |
| !! | TTGTAATCAGTGTTGGTTTA+AGG | - | chr3.4:94207197-94207216 | None:intergenic | 30.0% |
| !!! | CTTCTTTATTTTGGTTGCAT+TGG | + | chr3.4:94208823-94208842 | MS.gene073006:intron | 30.0% |
| !!! | GACTTTTTTTTATTGGGGAA+TGG | + | chr3.4:94208894-94208913 | MS.gene073006:intron | 30.0% |
| !!! | GCAAACAACTTTTTTGTCAT+TGG | - | chr3.4:94209242-94209261 | None:intergenic | 30.0% |
| !!! | TTTTTTCTCTTTTTGGTAGG+AGG | - | chr3.4:94210121-94210140 | None:intergenic | 30.0% |
| AAAATGTGTCACCGCAAAAA+CGG | - | chr3.4:94207037-94207056 | None:intergenic | 35.0% | |
| AATACTACAAAGCCCATGTT+TGG | + | chr3.4:94209205-94209224 | MS.gene073006:intron | 35.0% | |
| AATCAACCGTGATTAGGATT+AGG | - | chr3.4:94206652-94206671 | None:intergenic | 35.0% | |
| ACTTCTTTCTTTCTAGGTGT+AGG | - | chr3.4:94208010-94208029 | None:intergenic | 35.0% | |
| AGAACAAGCAGAGAATCAAT+TGG | + | chr3.4:94207955-94207974 | MS.gene073006:CDS | 35.0% | |
| AGAGAACAACATAATCCCAA+TGG | + | chr3.4:94206208-94206227 | MS.gene073006:CDS | 35.0% | |
| AGAGTTTGTAGGGTTTGAAA+TGG | - | chr3.4:94207601-94207620 | None:intergenic | 35.0% | |
| AGCTGATGCTTATGAATACA+TGG | + | chr3.4:94206499-94206518 | MS.gene073006:CDS | 35.0% | |
| ATAACTGTTGAACAAGTGCA+TGG | + | chr3.4:94210065-94210084 | MS.gene073006:CDS | 35.0% | |
| ATAATTACGGCAGCTAATTG+GGG | - | chr3.4:94206617-94206636 | None:intergenic | 35.0% | |
| ATATATCCCTAGAGCATGAA+TGG | - | chr3.4:94208205-94208224 | None:intergenic | 35.0% | |
| ATCAACCGTGATTAGGATTA+GGG | - | chr3.4:94206651-94206670 | None:intergenic | 35.0% | |
| ATGGAAAATGAAGAATGACG+AGG | - | chr3.4:94209824-94209843 | None:intergenic | 35.0% | |
| ATTGTAATTAGGGTCAAGCA+AGG | - | chr3.4:94207064-94207083 | None:intergenic | 35.0% | |
| CACAATTGTAATCAGGGATA+GGG | - | chr3.4:94207105-94207124 | None:intergenic | 35.0% | |
| CAGGTACAATAAACAAGTAG+AGG | - | chr3.4:94209523-94209542 | None:intergenic | 35.0% | |
| CAGTTTATCGTGTATTTGCA+TGG | - | chr3.4:94209925-94209944 | None:intergenic | 35.0% | |
| CATGGCATCTTAGATTTACT+TGG | + | chr3.4:94209471-94209490 | MS.gene073006:intron | 35.0% | |
| CTCTCGAAGCATAAAAATGT+TGG | - | chr3.4:94208721-94208740 | None:intergenic | 35.0% | |
| GATGTTGAATCAGCAATTTC+AGG | + | chr3.4:94207380-94207399 | MS.gene073006:CDS | 35.0% | |
| GTAAACCCTAATCCTAATCA+CGG | + | chr3.4:94206643-94206662 | MS.gene073006:intron | 35.0% | |
| GTAATTAGGGTTAGGGTTTA+AGG | - | chr3.4:94206679-94206698 | None:intergenic | 35.0% | |
| GTGATTAGGATTAGGGTTTA+CGG | - | chr3.4:94206644-94206663 | None:intergenic | 35.0% | |
| TAGAATCCATTCATGCTCTA+GGG | + | chr3.4:94208196-94208215 | MS.gene073006:intron | 35.0% | |
| TATCATTCACATCCTGGTTA+TGG | + | chr3.4:94207324-94207343 | MS.gene073006:CDS | 35.0% | |
| TATTCTGATACAGCACTGTA+TGG | - | chr3.4:94209761-94209780 | None:intergenic | 35.0% | |
| TCACAATTGTAATCAGGGAT+AGG | - | chr3.4:94207106-94207125 | None:intergenic | 35.0% | |
| TCACTCACTTCTTTCTTTCT+AGG | - | chr3.4:94208016-94208035 | None:intergenic | 35.0% | |
| TGATTAGGATTAGGGTTTAC+GGG | - | chr3.4:94206643-94206662 | None:intergenic | 35.0% | |
| TGTATTTGCATGGTCAAGAT+TGG | - | chr3.4:94209915-94209934 | None:intergenic | 35.0% | |
| TTATTCTCAGACCAACAAAC+AGG | + | chr3.4:94206526-94206545 | MS.gene073006:CDS | 35.0% | |
| TTTGGAGGGAAAAATGCTTT+GGG | - | chr3.4:94209091-94209110 | None:intergenic | 35.0% | |
| ! | AAGAAAACAATAGTGGGAAG+AGG | + | chr3.4:94208371-94208390 | MS.gene073006:intron | 35.0% |
| ! | ACTTCATGCAAAAGCATGTT+TGG | - | chr3.4:94209109-94209128 | None:intergenic | 35.0% |
| ! | AGAAAACAATAGTGGGAAGA+GGG | + | chr3.4:94208372-94208391 | MS.gene073006:intron | 35.0% |
| ! | AGTTTGTAGGGTTTGAAATG+GGG | - | chr3.4:94207599-94207618 | None:intergenic | 35.0% |
| ! | AGTTTTCTCTGAATTTCTGC+TGG | + | chr3.4:94209546-94209565 | MS.gene073006:intron | 35.0% |
| ! | CACTTGTTCATTTGAAGTCT+AGG | + | chr3.4:94208124-94208143 | MS.gene073006:intron | 35.0% |
| ! | GAGTTTGTAGGGTTTGAAAT+GGG | - | chr3.4:94207600-94207619 | None:intergenic | 35.0% |
| ! | TAGAGCATGAATGGATTCTA+CGG | - | chr3.4:94208196-94208215 | None:intergenic | 35.0% |
| ! | TTCTCTTGATTCACACCTTT+TGG | + | chr3.4:94207700-94207719 | MS.gene073006:CDS | 35.0% |
| !! | AAAAGCATCCATAACGATGA+TGG | - | chr3.4:94206438-94206457 | None:intergenic | 35.0% |
| !! | CAACTTTCAATCATTGGTTC+AGG | - | chr3.4:94210266-94210285 | None:intergenic | 35.0% |
| !! | GTTTTGTTGGGATGAAATAG+AGG | + | chr3.4:94208453-94208472 | MS.gene073006:intron | 35.0% |
| !!! | TTTTAGTTCGGAGCAATCTT+CGG | + | chr3.4:94209868-94209887 | MS.gene073006:intron | 35.0% |
| !!! | TTTTGGTGTCCATTGTAAAC+AGG | + | chr3.4:94207554-94207573 | MS.gene073006:CDS | 35.0% |
| AAATGTTTGGACTCCAACTG+TGG | + | chr3.4:94208310-94208329 | MS.gene073006:intron | 40.0% | |
| AATGTTTGGACTCCAACTGT+GGG | + | chr3.4:94208311-94208330 | MS.gene073006:intron | 40.0% | |
| ACAAAGACGAACCTGTTTGT+TGG | - | chr3.4:94206540-94206559 | None:intergenic | 40.0% | |
| AGCGATAGCACAACAAACAT+GGG | + | chr3.4:94206181-94206200 | MS.gene073006:CDS | 40.0% | |
| AGTATACTGTGGTACACTCA+TGG | - | chr3.4:94208280-94208299 | None:intergenic | 40.0% | |
| AGTGCATGGTTTAATGTCAC+AGG | + | chr3.4:94210079-94210098 | MS.gene073006:CDS | 40.0% | |
| ATGCATAGCACACTAGTAGA+GGG | - | chr3.4:94209644-94209663 | None:intergenic | 40.0% | |
| CAAAAACGGCTGCAACATAA+AGG | - | chr3.4:94207023-94207042 | None:intergenic | 40.0% | |
| CAGAGAATAGTGTTCTCTGT+AGG | + | chr3.4:94208531-94208550 | MS.gene073006:intron | 40.0% | |
| CTATGTAGCTGGACAAATCT+CGG | + | chr3.4:94207787-94207806 | MS.gene073006:CDS | 40.0% | |
| CTTGATGAACAGAGTTGAAC+AGG | - | chr3.4:94210214-94210233 | None:intergenic | 40.0% | |
| GATATTTGTGTGTGTAGGCT+GGG | + | chr3.4:94207277-94207296 | MS.gene073006:intron | 40.0% | |
| GCAAATGTTCAACATCCAGT+CGG | - | chr3.4:94208968-94208987 | None:intergenic | 40.0% | |
| GGGAAAAATCAACCGTGATT+AGG | - | chr3.4:94206658-94206677 | None:intergenic | 40.0% | |
| GGTGGAACAATCGAAGTTAT+GGG | + | chr3.4:94206383-94206402 | MS.gene073006:CDS | 40.0% | |
| GTAATCAGGGATAGGGTTTA+CGG | - | chr3.4:94207098-94207117 | None:intergenic | 40.0% | |
| GTAGAATCCATTCATGCTCT+AGG | + | chr3.4:94208195-94208214 | MS.gene073006:intron | 40.0% | |
| GTTGTTAATGTCCCATCCAT+TGG | + | chr3.4:94209312-94209331 | MS.gene073006:intron | 40.0% | |
| GTTTGGAGGGAAAAATGCTT+TGG | - | chr3.4:94209092-94209111 | None:intergenic | 40.0% | |
| TAGTCTCCATTGCCCAATAA+AGG | - | chr3.4:94207770-94207789 | None:intergenic | 40.0% | |
| TAGTGTTCTCTGTAGGAACT+TGG | + | chr3.4:94208538-94208557 | MS.gene073006:intron | 40.0% | |
| TATGCATAGCACACTAGTAG+AGG | - | chr3.4:94209645-94209664 | None:intergenic | 40.0% | |
| TCAATCACAACCGCCAAAAA+CGG | - | chr3.4:94207408-94207427 | None:intergenic | 40.0% | |
| TCAGAAATAGGATCATCAGC+AGG | - | chr3.4:94207501-94207520 | None:intergenic | 40.0% | |
| TCTTCTCCTTTATTGGGCAA+TGG | + | chr3.4:94207761-94207780 | MS.gene073006:CDS | 40.0% | |
| TGATATTTGTGTGTGTAGGC+TGG | + | chr3.4:94207276-94207295 | MS.gene073006:intron | 40.0% | |
| TGGAAGATTGAATCGTCTGA+AGG | - | chr3.4:94206239-94206258 | None:intergenic | 40.0% | |
| TGGTGGAACAATCGAAGTTA+TGG | + | chr3.4:94206382-94206401 | MS.gene073006:CDS | 40.0% | |
| TGTTCCACAGAAGATCCAAA+AGG | - | chr3.4:94207718-94207737 | None:intergenic | 40.0% | |
| TTGTTGGATGCAGGTAATCA+AGG | + | chr3.4:94210184-94210203 | MS.gene073006:intron | 40.0% | |
| ! | ATGCTATTTATTGGCTGAGC+TGG | - | chr3.4:94208990-94209009 | None:intergenic | 40.0% |
| ! | CAACATAAAGGTATAGGTGG+TGG | - | chr3.4:94207011-94207030 | None:intergenic | 40.0% |
| ! | CATGCAAAAGCATGTTTGGA+GGG | - | chr3.4:94209105-94209124 | None:intergenic | 40.0% |
| ! | CTGCAACATAAAGGTATAGG+TGG | - | chr3.4:94207014-94207033 | None:intergenic | 40.0% |
| ! | GAAGTTATGGGTCTTATGCA+AGG | + | chr3.4:94206395-94206414 | MS.gene073006:CDS | 40.0% |
| ! | GGTTCTAACTTCTATGCCAT+GGG | - | chr3.4:94209894-94209913 | None:intergenic | 40.0% |
| ! | TCATGCAAAAGCATGTTTGG+AGG | - | chr3.4:94209106-94209125 | None:intergenic | 40.0% |
| !! | TGCTGATTCCATCATCGTTA+TGG | + | chr3.4:94206427-94206446 | MS.gene073006:CDS | 40.0% |
| !! | TGGTTCTAACTTCTATGCCA+TGG | - | chr3.4:94209895-94209914 | None:intergenic | 40.0% |
| !! | TTCTCTTTTTGGTAGGAGGA+TGG | - | chr3.4:94210117-94210136 | None:intergenic | 40.0% |
| !!! | CTCTGCTTGTTCTAGCTTTT+CGG | - | chr3.4:94207948-94207967 | None:intergenic | 40.0% |
| !!! | TTATGTTGCAGCCGTTTTTG+CGG | + | chr3.4:94207023-94207042 | MS.gene073006:intron | 40.0% |
| AATTCCAACGCGATAAGCCA+TGG | + | chr3.4:94206282-94206301 | MS.gene073006:CDS | 45.0% | |
| AGGAAATATGAGCCCACAGT+TGG | - | chr3.4:94208326-94208345 | None:intergenic | 45.0% | |
| ATTCCAACGCGATAAGCCAT+GGG | + | chr3.4:94206283-94206302 | MS.gene073006:CDS | 45.0% | |
| CAGCAGGCTTATAACCTTCA+GGG | - | chr3.4:94207485-94207504 | None:intergenic | 45.0% | |
| CAGCGATAGCACAACAAACA+TGG | + | chr3.4:94206180-94206199 | MS.gene073006:CDS | 45.0% | |
| CCAGCAGAAACAGTTCTTGT+CGG | - | chr3.4:94207432-94207451 | None:intergenic | 45.0% | |
| CGAGTTTCAGTACCTTCAAC+AGG | - | chr3.4:94206467-94206486 | None:intergenic | 45.0% | |
| CGTCTGAAGGAGTTTCCATT+GGG | - | chr3.4:94206226-94206245 | None:intergenic | 45.0% | |
| GATGAGCACTTGCCAAACAT+GGG | - | chr3.4:94209220-94209239 | None:intergenic | 45.0% | |
| GCTGGACAAATCTCGGATTT+AGG | + | chr3.4:94207794-94207813 | MS.gene073006:CDS | 45.0% | |
| GGATGGTATCATTCACATCC+TGG | + | chr3.4:94207318-94207337 | MS.gene073006:CDS | 45.0% | |
| GGCTCATATTTCCTAGCTCA+CGG | + | chr3.4:94208332-94208351 | MS.gene073006:intron | 45.0% | |
| TCACGAGTGATCTTAGCAAG+TGG | - | chr3.4:94210035-94210054 | None:intergenic | 45.0% | |
| TCAGCAGGCTTATAACCTTC+AGG | - | chr3.4:94207486-94207505 | None:intergenic | 45.0% | |
| TCGTCTGAAGGAGTTTCCAT+TGG | - | chr3.4:94206227-94206246 | None:intergenic | 45.0% | |
| TGGCTTATCGCGTTGGAATT+CGG | - | chr3.4:94206282-94206301 | None:intergenic | 45.0% | |
| TGGGATGAAATAGAGGGAGA+GGG | + | chr3.4:94208460-94208479 | MS.gene073006:intron | 45.0% | |
| TTGACACGCTTGAAGTAGTG+AGG | - | chr3.4:94206317-94206336 | None:intergenic | 45.0% | |
| TTGGGATGAAATAGAGGGAG+AGG | + | chr3.4:94208459-94208478 | MS.gene073006:intron | 45.0% | |
| ! | AACTTGGCTCTTGGGACATT+AGG | + | chr3.4:94208554-94208573 | MS.gene073006:intron | 45.0% |
| ! | CACACCTTTTGGATCTTCTG+TGG | + | chr3.4:94207711-94207730 | MS.gene073006:CDS | 45.0% |
| ! | CGGCTGCAACATAAAGGTAT+AGG | - | chr3.4:94207017-94207036 | None:intergenic | 45.0% |
| ! | CGGTGAATTTTGTTGGATGC+AGG | + | chr3.4:94210175-94210194 | MS.gene073006:intron | 45.0% |
| ! | CTTCGAGAGTGTGAAAGAGA+AGG | + | chr3.4:94208732-94208751 | MS.gene073006:intron | 45.0% |
| ! | GAGAGAATGTGTGATGGTGA+GGG | - | chr3.4:94209680-94209699 | None:intergenic | 45.0% |
| ! | TCTGTAGGAACTTGGCTCTT+GGG | + | chr3.4:94208546-94208565 | MS.gene073006:intron | 45.0% |
| ! | TGAGAGAATGTGTGATGGTG+AGG | - | chr3.4:94209681-94209700 | None:intergenic | 45.0% |
| ! | TTTTGGTAGGAGGATGGTGT+TGG | - | chr3.4:94210111-94210130 | None:intergenic | 45.0% |
| !! | AACTGTTTCTGCTGGGAAAG+TGG | + | chr3.4:94207437-94207456 | MS.gene073006:CDS | 45.0% |
| !! | CGACAAGAACTGTTTCTGCT+GGG | + | chr3.4:94207430-94207449 | MS.gene073006:CDS | 45.0% |
| !! | GCAATTTCAGGAGCCGTTTT+TGG | + | chr3.4:94207392-94207411 | MS.gene073006:CDS | 45.0% |
| !! | GTTATGGTTGCTGGCTTTCT+GGG | + | chr3.4:94207340-94207359 | MS.gene073006:CDS | 45.0% |
| !!! | ATTTCAGGAGCCGTTTTTGG+CGG | + | chr3.4:94207395-94207414 | MS.gene073006:CDS | 45.0% |
| AAATTTCCACGCCGTGAGCT+AGG | - | chr3.4:94208346-94208365 | None:intergenic | 50.0% | |
| AACAGCCTGTTTGTGTGCAC+TGG | + | chr3.4:94209735-94209754 | MS.gene073006:intron | 50.0% | |
| AATTGGCACACTCGCGTTTC+GGG | + | chr3.4:94207972-94207991 | MS.gene073006:CDS | 50.0% | |
| ACCTTCAGGGTAAGTCCTGA+AGG | - | chr3.4:94207472-94207491 | None:intergenic | 50.0% | |
| AGATTCATGAGTGCTCCGAC+TGG | + | chr3.4:94208950-94208969 | MS.gene073006:intron | 50.0% | |
| ATATTTCCTAGCTCACGGCG+TGG | + | chr3.4:94208337-94208356 | MS.gene073006:intron | 50.0% | |
| ATCTTCCACTACGACGAAGC+AGG | + | chr3.4:94206251-94206270 | MS.gene073006:CDS | 50.0% | |
| ATTTGTGTGTGTAGGCTGGG+AGG | + | chr3.4:94207280-94207299 | MS.gene073006:intron | 50.0% | |
| CAATTGGCACACTCGCGTTT+CGG | + | chr3.4:94207971-94207990 | MS.gene073006:CDS | 50.0% | |
| CACATCCTGGTTATGGTTGC+TGG | + | chr3.4:94207331-94207350 | MS.gene073006:CDS | 50.0% | |
| CTGCTGGGAAAGTGGAGATT+GGG | + | chr3.4:94207445-94207464 | MS.gene073006:CDS | 50.0% | |
| GAAAGCCAGCAACCATAACC+AGG | - | chr3.4:94207339-94207358 | None:intergenic | 50.0% | |
| GAAATAGAGGGAGAGGGAGA+GGG | + | chr3.4:94208466-94208485 | MS.gene073006:intron | 50.0% | |
| GGATGAGCACTTGCCAAACA+TGG | - | chr3.4:94209221-94209240 | None:intergenic | 50.0% | |
| GGCAATGGAGACTATGTAGC+TGG | + | chr3.4:94207776-94207795 | MS.gene073006:CDS | 50.0% | |
| TATGGCCAGTGCACACAAAC+AGG | - | chr3.4:94209743-94209762 | None:intergenic | 50.0% | |
| TCTGCTGGGAAAGTGGAGAT+TGG | + | chr3.4:94207444-94207463 | MS.gene073006:CDS | 50.0% | |
| TGAAATAGAGGGAGAGGGAG+AGG | + | chr3.4:94208465-94208484 | MS.gene073006:intron | 50.0% | |
| TGCACGGTGTATTGTCGTGT+CGG | + | chr3.4:94206936-94206955 | MS.gene073006:intron | 50.0% | |
| TGCACTCGCTCTTCTCAAGA+TGG | + | chr3.4:94206343-94206362 | MS.gene073006:CDS | 50.0% | |
| TGCTGGGAAAGTGGAGATTG+GGG | + | chr3.4:94207446-94207465 | MS.gene073006:CDS | 50.0% | |
| ! | AGGGTTTGAAATGGGGAGCA+AGG | - | chr3.4:94207592-94207611 | None:intergenic | 50.0% |
| ! | CTCTGTAGGAACTTGGCTCT+TGG | + | chr3.4:94208545-94208564 | MS.gene073006:intron | 50.0% |
| ! | GCTTTTGCGCTACCTGTTGA+AGG | + | chr3.4:94206452-94206471 | MS.gene073006:CDS | 50.0% |
| !! | CCGACAAGAACTGTTTCTGC+TGG | + | chr3.4:94207429-94207448 | MS.gene073006:CDS | 50.0% |
| !! | GAAGAGGGTAAGTGCTGATG+TGG | + | chr3.4:94208387-94208406 | MS.gene073006:intron | 50.0% |
| !! | GGTTATGGTTGCTGGCTTTC+TGG | + | chr3.4:94207339-94207358 | MS.gene073006:CDS | 50.0% |
| !!! | GGAGAGGGAGAGGTATCTTT+TGG | + | chr3.4:94208481-94208500 | MS.gene073006:intron | 50.0% |
| AAGTGGAGATTGGGGCCTTC+AGG | + | chr3.4:94207454-94207473 | MS.gene073006:CDS | 55.0% | |
| ATGGTTGTTCACGCGCGTTC+TGG | + | chr3.4:94206362-94206381 | MS.gene073006:CDS | 55.0% | |
| CTTGTCCTGCTTCGTCGTAG+TGG | - | chr3.4:94206259-94206278 | None:intergenic | 55.0% | |
| GCCTTCAGGACTTACCCTGA+AGG | + | chr3.4:94207468-94207487 | MS.gene073006:CDS | 55.0% | |
| GGGAGGTTGGAGAATGTCGT+GGG | + | chr3.4:94207297-94207316 | MS.gene073006:CDS | 55.0% | |
| GGTTGGAGAATGTCGTGGGA+TGG | + | chr3.4:94207301-94207320 | MS.gene073006:CDS | 55.0% | |
| TACACCGTGCACACTGCACA+CGG | - | chr3.4:94206927-94206946 | None:intergenic | 55.0% | |
| TAGTGAGGATCGTTCGCCCA+TGG | - | chr3.4:94206302-94206321 | None:intergenic | 55.0% | |
| TGGGAGGTTGGAGAATGTCG+TGG | + | chr3.4:94207296-94207315 | MS.gene073006:CDS | 55.0% | |
| ! | CTAGGTGTAGGTGCTACCAG+TGG | - | chr3.4:94207998-94208017 | None:intergenic | 55.0% |
| !! | AGGGTAAGTGCTGATGTGGC+AGG | + | chr3.4:94208391-94208410 | MS.gene073006:intron | 55.0% |
| !! | GGGTAAGTGCTGATGTGGCA+GGG | + | chr3.4:94208392-94208411 | MS.gene073006:intron | 55.0% |
| ATGTGGCAGGGAGTGAGGGA+AGG | + | chr3.4:94208404-94208423 | MS.gene073006:intron | 60.0% | |
| CCTACCGTGTGCAGTGTGCA+CGG | + | chr3.4:94206920-94206939 | MS.gene073006:intron | 60.0% | |
| CGTGCACACTGCACACGGTA+GGG | - | chr3.4:94206922-94206941 | None:intergenic | 60.0% | |
| GCTGATGTGGCAGGGAGTGA+GGG | + | chr3.4:94208400-94208419 | MS.gene073006:intron | 60.0% | |
| GTGTGTGTAGGCTGGGAGGT+TGG | + | chr3.4:94207284-94207303 | MS.gene073006:intron | 60.0% | |
| GTTGTTCACGCGCGTTCTGG+TGG | + | chr3.4:94206365-94206384 | MS.gene073006:CDS | 60.0% | |
| TCGCCCATGGCTTATCGCGT+TGG | - | chr3.4:94206289-94206308 | None:intergenic | 60.0% | |
| TCGGAGCAATCTTCGGCCCA+TGG | + | chr3.4:94209875-94209894 | MS.gene073006:intron | 60.0% | |
| TGCTGATGTGGCAGGGAGTG+AGG | + | chr3.4:94208399-94208418 | MS.gene073006:intron | 60.0% | |
| TGTGGCAGGGAGTGAGGGAA+GGG | + | chr3.4:94208405-94208424 | MS.gene073006:intron | 60.0% | |
| ACACTCGCGTTTCGGGCCAC+TGG | + | chr3.4:94207979-94207998 | MS.gene073006:CDS | 65.0% | |
| AGAGGGAGAGGGAGAGGGAG+AGG | + | chr3.4:94208471-94208490 | MS.gene073006:intron | 65.0% | |
| CCGTGCACACTGCACACGGT+AGG | - | chr3.4:94206923-94206942 | None:intergenic | 65.0% | |
| GTGGCAGGGAGTGAGGGAAG+GGG | + | chr3.4:94208406-94208425 | MS.gene073006:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 94206155 | 94210286 | 94206155 | ID=MS.gene073006 |
| chr3.4 | mRNA | 94206155 | 94210286 | 94206155 | ID=MS.gene073006.t1;Parent=MS.gene073006 |
| chr3.4 | exon | 94206155 | 94206547 | 94206155 | ID=MS.gene073006.t1.exon1;Parent=MS.gene073006.t1 |
| chr3.4 | CDS | 94206155 | 94206547 | 94206155 | ID=cds.MS.gene073006.t1;Parent=MS.gene073006.t1 |
| chr3.4 | exon | 94207294 | 94207575 | 94207294 | ID=MS.gene073006.t1.exon2;Parent=MS.gene073006.t1 |
| chr3.4 | CDS | 94207294 | 94207575 | 94207294 | ID=cds.MS.gene073006.t1;Parent=MS.gene073006.t1 |
| chr3.4 | exon | 94207668 | 94207815 | 94207668 | ID=MS.gene073006.t1.exon3;Parent=MS.gene073006.t1 |
| chr3.4 | CDS | 94207668 | 94207815 | 94207668 | ID=cds.MS.gene073006.t1;Parent=MS.gene073006.t1 |
| chr3.4 | exon | 94207945 | 94208027 | 94207945 | ID=MS.gene073006.t1.exon4;Parent=MS.gene073006.t1 |
| chr3.4 | CDS | 94207945 | 94208027 | 94207945 | ID=cds.MS.gene073006.t1;Parent=MS.gene073006.t1 |
| chr3.4 | exon | 94210023 | 94210100 | 94210023 | ID=MS.gene073006.t1.exon5;Parent=MS.gene073006.t1 |
| chr3.4 | CDS | 94210023 | 94210100 | 94210023 | ID=cds.MS.gene073006.t1;Parent=MS.gene073006.t1 |
| chr3.4 | exon | 94210197 | 94210286 | 94210197 | ID=MS.gene073006.t1.exon6;Parent=MS.gene073006.t1 |
| chr3.4 | CDS | 94210197 | 94210286 | 94210197 | ID=cds.MS.gene073006.t1;Parent=MS.gene073006.t1 |
| Gene Sequence |
| Protein sequence |
