AlfalfaGEDB | MS.gene33131

M. sativa cultivar XinJiangDaYe / MS.gene33131

KEGG: -
GO: -
PFAM: PF01133.20

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene33131.t1	XP_003588876.1	94.2	104	6	0	1	104	1	104	4.00E-49	203.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene33131.t1	Q96319	74.3	101	26	0	3	103	5	105	1.9e-39	162.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene33131.t1	G7I895	94.2	104	6	0	1	104	1	104	2.9e-49	203.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049254	MS.gene33131	0.856653	2.78E-62	-1.69E-46
MS.gene049343	MS.gene33131	0.810261	1.26E-50	-1.69E-46
MS.gene049567	MS.gene33131	0.840492	8.42E-58	-1.69E-46
MS.gene049666	MS.gene33131	0.807383	5.19E-50	-1.69E-46
MS.gene049669	MS.gene33131	0.822356	2.47E-53	-1.69E-46
MS.gene049824	MS.gene33131	0.821056	4.94E-53	-1.69E-46
MS.gene049825	MS.gene33131	0.857103	2.05E-62	-1.69E-46
MS.gene049873	MS.gene33131	0.86133	1.11E-63	-1.69E-46
MS.gene050026	MS.gene33131	0.831803	1.36E-55	-1.69E-46
MS.gene050201	MS.gene33131	0.815578	8.60E-52	-1.69E-46
MS.gene050287	MS.gene33131	-0.801774	7.68E-49	-1.69E-46
MS.gene050303	MS.gene33131	0.823579	1.28E-53	-1.69E-46
MS.gene050355	MS.gene33131	0.86227	5.71E-64	-1.69E-46
MS.gene050559	MS.gene33131	0.854317	1.33E-61	-1.69E-46
MS.gene050561	MS.gene33131	0.849119	3.97E-60	-1.69E-46
MS.gene050562	MS.gene33131	0.831864	1.31E-55	-1.69E-46
MS.gene050719	MS.gene33131	0.819962	8.82E-53	-1.69E-46
MS.gene050721	MS.gene33131	0.8173	3.54E-52	-1.69E-46
MS.gene050724	MS.gene33131	0.800814	1.21E-48	-1.69E-46
MS.gene050780	MS.gene33131	0.819147	1.35E-52	-1.69E-46
MS.gene050799	MS.gene33131	0.823916	1.07E-53	-1.69E-46
MS.gene050844	MS.gene33131	0.803202	3.90E-49	-1.69E-46
MS.gene050953	MS.gene33131	0.802823	4.67E-49	-1.69E-46
MS.gene051181	MS.gene33131	0.80651	7.94E-50	-1.69E-46
MS.gene051207	MS.gene33131	0.803246	3.82E-49	-1.69E-46
MS.gene051247	MS.gene33131	0.80423	2.39E-49	-1.69E-46
MS.gene051594	MS.gene33131	0.813028	3.15E-51	-1.69E-46
MS.gene051678	MS.gene33131	0.80845	3.08E-50	-1.69E-46
MS.gene051744	MS.gene33131	0.854385	1.27E-61	-1.69E-46
MS.gene051957	MS.gene33131	0.802224	6.21E-49	-1.69E-46
MS.gene052176	MS.gene33131	0.82838	9.29E-55	-1.69E-46
MS.gene052190	MS.gene33131	0.814181	1.76E-51	-1.69E-46
MS.gene052208	MS.gene33131	0.870951	9.90E-67	-1.69E-46
MS.gene052333	MS.gene33131	0.822851	1.90E-53	-1.69E-46
MS.gene052358	MS.gene33131	-0.834191	3.46E-56	-1.69E-46
MS.gene052519	MS.gene33131	0.84756	1.07E-59	-1.69E-46
MS.gene052582	MS.gene33131	0.829695	4.46E-55	-1.69E-46
MS.gene052584	MS.gene33131	0.833989	3.88E-56	-1.69E-46
MS.gene052685	MS.gene33131	0.809537	1.80E-50	-1.69E-46
MS.gene052773	MS.gene33131	0.807547	4.79E-50	-1.69E-46
MS.gene052866	MS.gene33131	0.80223	6.19E-49	-1.69E-46
MS.gene052867	MS.gene33131	0.829197	5.89E-55	-1.69E-46
MS.gene052926	MS.gene33131	0.810075	1.38E-50	-1.69E-46
MS.gene053006	MS.gene33131	0.867358	1.45E-65	-1.69E-46
MS.gene053054	MS.gene33131	-0.814643	1.39E-51	-1.69E-46
MS.gene053145	MS.gene33131	0.829746	4.33E-55	-1.69E-46
MS.gene053226	MS.gene33131	0.862078	6.54E-64	-1.69E-46
MS.gene053294	MS.gene33131	0.832179	1.10E-55	-1.69E-46
MS.gene05365	MS.gene33131	0.826867	2.14E-54	-1.69E-46
MS.gene053883	MS.gene33131	0.800494	1.40E-48	-1.69E-46
MS.gene053900	MS.gene33131	0.812176	4.84E-51	-1.69E-46
MS.gene053963	MS.gene33131	0.811299	7.50E-51	-1.69E-46
MS.gene053995	MS.gene33131	0.84548	3.96E-59	-1.69E-46
MS.gene053998	MS.gene33131	0.813521	2.45E-51	-1.69E-46
MS.gene05414	MS.gene33131	0.813393	2.62E-51	-1.69E-46
MS.gene05415	MS.gene33131	0.83994	1.17E-57	-1.69E-46
MS.gene054222	MS.gene33131	0.801192	1.01E-48	-1.69E-46
MS.gene054291	MS.gene33131	-0.811261	7.65E-51	-1.69E-46
MS.gene054651	MS.gene33131	0.827848	1.25E-54	-1.69E-46
MS.gene055166	MS.gene33131	0.818498	1.90E-52	-1.69E-46
MS.gene055227	MS.gene33131	0.804545	2.05E-49	-1.69E-46
MS.gene055374	MS.gene33131	0.803128	4.04E-49	-1.69E-46
MS.gene05548	MS.gene33131	0.8234	1.41E-53	-1.69E-46
MS.gene055586	MS.gene33131	0.830661	2.59E-55	-1.69E-46
MS.gene055589	MS.gene33131	0.854283	1.36E-61	-1.69E-46
MS.gene055778	MS.gene33131	0.847284	1.27E-59	-1.69E-46
MS.gene055808	MS.gene33131	0.844533	7.13E-59	-1.69E-46
MS.gene055818	MS.gene33131	0.842545	2.42E-58	-1.69E-46
MS.gene056050	MS.gene33131	0.80604	9.98E-50	-1.69E-46
MS.gene056091	MS.gene33131	0.848677	5.26E-60	-1.69E-46
MS.gene056366	MS.gene33131	0.837068	6.46E-57	-1.69E-46
MS.gene056373	MS.gene33131	0.802455	5.56E-49	-1.69E-46
MS.gene056498	MS.gene33131	0.820146	8.00E-53	-1.69E-46
MS.gene056506	MS.gene33131	0.837243	5.83E-57	-1.69E-46
MS.gene05659	MS.gene33131	0.811433	7.02E-51	-1.69E-46
MS.gene056642	MS.gene33131	0.808812	2.58E-50	-1.69E-46
MS.gene05686	MS.gene33131	0.810827	9.50E-51	-1.69E-46
MS.gene057026	MS.gene33131	0.852085	5.82E-61	-1.69E-46
MS.gene057027	MS.gene33131	0.809106	2.23E-50	-1.69E-46
MS.gene057060	MS.gene33131	0.834517	2.86E-56	-1.69E-46
MS.gene057079	MS.gene33131	0.800633	1.32E-48	-1.69E-46
MS.gene057208	MS.gene33131	0.820045	8.44E-53	-1.69E-46
MS.gene057314	MS.gene33131	0.815919	7.22E-52	-1.69E-46
MS.gene057414	MS.gene33131	0.812262	4.63E-51	-1.69E-46
MS.gene057693	MS.gene33131	0.802439	5.61E-49	-1.69E-46
MS.gene05795	MS.gene33131	0.804169	2.46E-49	-1.69E-46
MS.gene058009	MS.gene33131	0.803644	3.16E-49	-1.69E-46
MS.gene058037	MS.gene33131	0.848019	8.00E-60	-1.69E-46
MS.gene058477	MS.gene33131	0.812783	3.56E-51	-1.69E-46
MS.gene058498	MS.gene33131	0.825248	5.20E-54	-1.69E-46
MS.gene058625	MS.gene33131	0.830739	2.48E-55	-1.69E-46
MS.gene058635	MS.gene33131	0.814307	1.65E-51	-1.69E-46
MS.gene058908	MS.gene33131	0.8014	9.17E-49	-1.69E-46
MS.gene058979	MS.gene33131	0.847491	1.12E-59	-1.69E-46
MS.gene059015	MS.gene33131	0.80507	1.59E-49	-1.69E-46
MS.gene059272	MS.gene33131	0.81012	1.35E-50	-1.69E-46
MS.gene05953	MS.gene33131	0.817083	3.96E-52	-1.69E-46
MS.gene05954	MS.gene33131	0.872883	2.26E-67	-1.69E-46
MS.gene059625	MS.gene33131	0.809143	2.19E-50	-1.69E-46
MS.gene059789	MS.gene33131	0.800294	1.54E-48	-1.69E-46
MS.gene059935	MS.gene33131	0.827953	1.18E-54	-1.69E-46
MS.gene060322	MS.gene33131	0.808064	3.72E-50	-1.69E-46
MS.gene060365	MS.gene33131	0.805563	1.26E-49	-1.69E-46
MS.gene060429	MS.gene33131	0.828558	8.41E-55	-1.69E-46
MS.gene060521	MS.gene33131	0.862756	4.05E-64	-1.69E-46
MS.gene060572	MS.gene33131	0.853772	1.92E-61	-1.69E-46
MS.gene060586	MS.gene33131	0.80366	3.14E-49	-1.69E-46
MS.gene060840	MS.gene33131	0.804215	2.40E-49	-1.69E-46
MS.gene060879	MS.gene33131	0.81741	3.35E-52	-1.69E-46
MS.gene061040	MS.gene33131	-0.842131	3.12E-58	-1.69E-46
MS.gene061266	MS.gene33131	0.847642	1.02E-59	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene014733	MS.gene33131	PPI
MS.gene33131	MS.gene85661	PPI
MS.gene33131	MS.gene073006	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene33131.t1	MTR_1g014230	94.231	104	6	0	1	104	1	104	4.15e-70	204

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene33131.t1	AT5G10810	74.257	101	26	0	3	103	5	105	1.40e-53	163

Find 18 sgRNAs with CRISPR-Local

Find 134 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTTCAACATTTGAAGAAAT+TGG	0.132075	1.3:+8384736	MS.gene33131:CDS
TAGAGCTACCAGAACTTTCA+TGG	0.334223	1.3:+8382975	MS.gene33131:CDS
CTTAATCCACTCTCGATCAT+AGG	0.344190	1.3:-8384705	None:intergenic
TTCTTTACTTGCAGTTATGA+TGG	0.351370	1.3:+8384662	MS.gene33131:intron
GTGAAAATCCATGAAAGTTC+TGG	0.356886	1.3:-8382983	None:intergenic
CTATGATCGAGAGTGGATTA+AGG	0.376363	1.3:+8384706	MS.gene33131:CDS
AGAAGTTTGAATTAGAATAA+TGG	0.430839	1.3:-8382947	None:intergenic
TAAGAGATATTTCTGACGGC+TGG	0.446674	1.3:-8383629	None:intergenic
AAATATCTCTTATGATATCA+TGG	0.475878	1.3:+8383640	MS.gene33131:CDS
CAATTTCTTCAAATGTTGAA+AGG	0.494842	1.3:-8384735	None:intergenic
TTAATCCACTCTCGATCATA+GGG	0.515090	1.3:-8384704	None:intergenic
TCCATCTCTCTTGCTATCGA+TGG	0.553990	1.3:+8383006	MS.gene33131:CDS
GCATATGTGGACTGTATGAA+AGG	0.565109	1.3:+8383588	MS.gene33131:CDS
ATCATAAGAGATATTTCTGA+CGG	0.580337	1.3:-8383633	None:intergenic
ACTTTCCCTATGATCGAGAG+TGG	0.592959	1.3:+8384699	MS.gene33131:CDS
GATCTCTACAACTTCATAGA+CGG	0.620195	1.3:+8383662	MS.gene33131:CDS
ACCATCGATAGCAAGAGAGA+TGG	0.627765	1.3:-8383007	None:intergenic
ACTGTATGAAAGGAAACTGA+AGG	0.645635	1.3:+8383598	MS.gene33131:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAATACGAAAAAATAATAA+AGG	-	chr1.3:8383298-8383317	None:intergenic	10.0%
!!	ATTCTTTCAAATTTCAAATT+AGG	+	chr1.3:8382862-8382881	MS.gene33131:intron	15.0%
!!	AAATATCTCTTATGATATCA+TGG	+	chr1.3:8383640-8383659	MS.gene33131:CDS	20.0%
!!	AAGTATCAACAAAGAATAAA+GGG	-	chr1.3:8383514-8383533	None:intergenic	20.0%
!!	AATAACTTATTCTTGAATCA+TGG	-	chr1.3:8384112-8384131	None:intergenic	20.0%
!!	ACAAAAGAGAAAAAAGTAAA+TGG	+	chr1.3:8384044-8384063	MS.gene33131:intron	20.0%
!!	AGAAGTTTGAATTAGAATAA+TGG	-	chr1.3:8382950-8382969	None:intergenic	20.0%
!!	TAATTAATTGCTTTAATCAC+AGG	+	chr1.3:8382906-8382925	MS.gene33131:intron	20.0%
!!	TCAAATGAAAATTAAGAGTA+TGG	+	chr1.3:8384299-8384318	MS.gene33131:intron	20.0%
!!!	AAAGTATCAACAAAGAATAA+AGG	-	chr1.3:8383515-8383534	None:intergenic	20.0%
!!!	ATTCTTTGTTGATACTTTTA+GGG	+	chr1.3:8383318-8383337	MS.gene33131:intron	20.0%
!!!	CAAATGAAAATTAAGAGTAT+GGG	+	chr1.3:8384300-8384319	MS.gene33131:intron	20.0%
!!!	CTTAATTTTCATTTGATTCA+TGG	-	chr1.3:8384295-8384314	None:intergenic	20.0%
!!!	TATTCTTTGTTGATACTTTT+AGG	+	chr1.3:8383317-8383336	MS.gene33131:intron	20.0%
!!!	TATTTTCTAGGTTGTTAATA+GGG	+	chr1.3:8383212-8383231	MS.gene33131:intron	20.0%
!!!	TGATTGCTCTTTTATATATT+GGG	+	chr1.3:8384585-8384604	MS.gene33131:intron	20.0%
!!!	TTATTTTCTAGGTTGTTAAT+AGG	+	chr1.3:8383211-8383230	MS.gene33131:intron	20.0%
!!!	TTTTAATCATGTGTTTTTAC+AGG	+	chr1.3:8383566-8383585	MS.gene33131:intron	20.0%
!	AAAAGTAAATGGTAAAGGAA+AGG	+	chr1.3:8384055-8384074	MS.gene33131:intron	25.0%
!	ATAATAAAGGATGTAAATCC+CGG	-	chr1.3:8383285-8383304	None:intergenic	25.0%
!	CAATTTCTTCAAATGTTGAA+AGG	-	chr1.3:8384738-8384757	None:intergenic	25.0%
!	CTTTCAACATTTGAAGAAAT+TGG	+	chr1.3:8384736-8384755	MS.gene33131:CDS	25.0%
!	GAGAAAAAAGTAAATGGTAA+AGG	+	chr1.3:8384050-8384069	MS.gene33131:intron	25.0%
!	TACATAAGACAGTTGAATAA+AGG	-	chr1.3:8384563-8384582	None:intergenic	25.0%
!	TCATTATCAGCATTAAATAG+AGG	+	chr1.3:8383543-8383562	MS.gene33131:intron	25.0%
!!	ACATCTGGAAATTATTTTCT+AGG	+	chr1.3:8383200-8383219	MS.gene33131:intron	25.0%
!!	ATCATAAGAGATATTTCTGA+CGG	-	chr1.3:8383636-8383655	None:intergenic	25.0%
!!	ATTTTCTAGGTTGTTAATAG+GGG	+	chr1.3:8383213-8383232	MS.gene33131:intron	25.0%
!!	CTGTTTAAAACACTACAATT+TGG	+	chr1.3:8384201-8384220	MS.gene33131:intron	25.0%
!!	GTGATTGCTCTTTTATATAT+TGG	+	chr1.3:8384584-8384603	MS.gene33131:intron	25.0%
!!	TTCTTTGTTGATACTTTTAG+GGG	+	chr1.3:8383319-8383338	MS.gene33131:intron	25.0%
!!	TTTTAAACAGAACAGACTAA+CGG	-	chr1.3:8384191-8384210	None:intergenic	25.0%
!!	TTTTTCATTAAGTAGTTGCT+TGG	+	chr1.3:8383936-8383955	MS.gene33131:intron	25.0%
!!!	TCCTAATATTTTTGTCAAGA+GGG	-	chr1.3:8384517-8384536	None:intergenic	25.0%
!!!	TTCCTAATATTTTTGTCAAG+AGG	-	chr1.3:8384518-8384537	None:intergenic	25.0%
	AAACACTACAATTTGGATCA+AGG	+	chr1.3:8384208-8384227	MS.gene33131:intron	30.0%
	AATGATGAAAGTGAAGTGAT+AGG	-	chr1.3:8383064-8383083	None:intergenic	30.0%
	ACCCTCTTGACAAAAATATT+AGG	+	chr1.3:8384513-8384532	MS.gene33131:intron	30.0%
	ATTGTTTCAATGTGACTGAA+AGG	+	chr1.3:8383364-8383383	MS.gene33131:intron	30.0%
	GAACATACTGTTTCAATATG+TGG	+	chr1.3:8383136-8383155	MS.gene33131:intron	30.0%
	TAGGAAAATGAAGTGAACTT+AGG	+	chr1.3:8384532-8384551	MS.gene33131:intron	30.0%
	TCACTTCACTTTCATCATTT+AGG	+	chr1.3:8383065-8383084	MS.gene33131:intron	30.0%
	TGGTCATATCTTGTTGAATT+TGG	+	chr1.3:8383956-8383975	MS.gene33131:intron	30.0%
	TTCTTTACTTGCAGTTATGA+TGG	+	chr1.3:8384662-8384681	MS.gene33131:intron	30.0%
	TTGATGTTAGAGAAAAAGTG+AGG	+	chr1.3:8383856-8383875	MS.gene33131:intron	30.0%
!	TCTCAAAATTTTGCATGCAT+AGG	+	chr1.3:8383724-8383743	MS.gene33131:intron	30.0%
!	TCTTTGTTGATACTTTTAGG+GGG	+	chr1.3:8383320-8383339	MS.gene33131:intron	30.0%
	AAAGAAGAGGAATCTAGAGA+GGG	-	chr1.3:8384428-8384447	None:intergenic	35.0%
	ACTGTATGAAAGGAAACTGA+AGG	+	chr1.3:8383598-8383617	MS.gene33131:CDS	35.0%
	AGCAATTGTGAGTTTGAAAG+AGG	+	chr1.3:8384336-8384355	MS.gene33131:intron	35.0%
	CATACAATACACCAAATGGT+GGG	+	chr1.3:8383440-8383459	MS.gene33131:intron	35.0%
	GATCTCTACAACTTCATAGA+CGG	+	chr1.3:8383662-8383681	MS.gene33131:CDS	35.0%
	GTGAAAATCCATGAAAGTTC+TGG	-	chr1.3:8382986-8383005	None:intergenic	35.0%
	GTGATATAGGACAATACATC+TGG	+	chr1.3:8383185-8383204	MS.gene33131:intron	35.0%
	GTTGCATACAATACACCAAA+TGG	+	chr1.3:8383436-8383455	MS.gene33131:intron	35.0%
	TAAAGAAGAGGAATCTAGAG+AGG	-	chr1.3:8384429-8384448	None:intergenic	35.0%
	TCATTGCTTCACAGTGATAT+AGG	+	chr1.3:8383172-8383191	MS.gene33131:intron	35.0%
	TCTTGTGTGAAAACAAGGTA+AGG	+	chr1.3:8383414-8383433	MS.gene33131:intron	35.0%
	TTAATCCACTCTCGATCATA+GGG	-	chr1.3:8384707-8384726	None:intergenic	35.0%
	TTCATTATGTCCTTAACTCC+AGG	-	chr1.3:8384452-8384471	None:intergenic	35.0%
!	ATTTTATGCTGAGCTAGAAC+TGG	+	chr1.3:8384164-8384183	MS.gene33131:intron	35.0%
!!	CTTTGTTGATACTTTTAGGG+GGG	+	chr1.3:8383321-8383340	MS.gene33131:intron	35.0%
!!	TGTGTTTTTACAGGCATATG+TGG	+	chr1.3:8383575-8383594	MS.gene33131:intron	35.0%
	AAACTTAACTGCCTCTCTGT+TGG	+	chr1.3:8384238-8384257	MS.gene33131:intron	40.0%
	AAGAAGAGGAATCTAGAGAG+GGG	-	chr1.3:8384427-8384446	None:intergenic	40.0%
	AAGAGGTCTTAAACCCTTGA+AGG	+	chr1.3:8384353-8384372	MS.gene33131:intron	40.0%
	CCAACACATTACTCCTTCAA+GGG	-	chr1.3:8384369-8384388	None:intergenic	40.0%
	CTAGATTCCTCTTCTTTACC+TGG	+	chr1.3:8384431-8384450	MS.gene33131:intron	40.0%
	CTCTTCTTTACCTGGAGTTA+AGG	+	chr1.3:8384439-8384458	MS.gene33131:intron	40.0%
	CTTAACTCCAGGTAAAGAAG+AGG	-	chr1.3:8384441-8384460	None:intergenic	40.0%
	CTTAATCCACTCTCGATCAT+AGG	-	chr1.3:8384708-8384727	None:intergenic	40.0%
	GCAAGTAAAGAACAACCAAC+CGG	-	chr1.3:8384654-8384673	None:intergenic	40.0%
	GCATACAATACACCAAATGG+TGG	+	chr1.3:8383439-8383458	MS.gene33131:intron	40.0%
	GTTTGCCTTGGAATTGGTTA+AGG	+	chr1.3:8384627-8384646	MS.gene33131:intron	40.0%
	TAGAGCTACCAGAACTTTCA+TGG	+	chr1.3:8382975-8382994	MS.gene33131:CDS	40.0%
	TCAATGTGACTGAAAGGTCA+CGG	+	chr1.3:8383370-8383389	MS.gene33131:intron	40.0%
	TCCAACACATTACTCCTTCA+AGG	-	chr1.3:8384370-8384389	None:intergenic	40.0%
	TTTGTCAAGAGGGTTACAAC+AGG	-	chr1.3:8384507-8384526	None:intergenic	40.0%
!	AAGAGTATGGGTGAGAACAT+TGG	+	chr1.3:8384312-8384331	MS.gene33131:intron	40.0%
!	ACAATTTTACCGTTGTGCCA+AGG	-	chr1.3:8383349-8383368	None:intergenic	40.0%
!	GCATATGTGGACTGTATGAA+AGG	+	chr1.3:8383588-8383607	MS.gene33131:CDS	40.0%
!	TAAGAGATATTTCTGACGGC+TGG	-	chr1.3:8383632-8383651	None:intergenic	40.0%
!!	CATTAGCTTTACCAACAGAG+AGG	-	chr1.3:8384252-8384271	None:intergenic	40.0%
!!	CTATGATCGAGAGTGGATTA+AGG	+	chr1.3:8384706-8384725	MS.gene33131:CDS	40.0%
	AACAATACGTGCCTCTATCC+GGG	+	chr1.3:8383264-8383283	MS.gene33131:intron	45.0%
	ACAAAGAATAAAGGGCAGCC+CGG	-	chr1.3:8383506-8383525	None:intergenic	45.0%
	ACCATCGATAGCAAGAGAGA+TGG	-	chr1.3:8383010-8383029	None:intergenic	45.0%
	ACTTTCCCTATGATCGAGAG+TGG	+	chr1.3:8384699-8384718	MS.gene33131:CDS	45.0%
	AGAAGAGGAATCTAGAGAGG+GGG	-	chr1.3:8384426-8384445	None:intergenic	45.0%
	AGGATGTAAATCCCGGATAG+AGG	-	chr1.3:8383278-8383297	None:intergenic	45.0%
	CAACAATACGTGCCTCTATC+CGG	+	chr1.3:8383263-8383282	MS.gene33131:intron	45.0%
	CAATGTGACTGAAAGGTCAC+GGG	+	chr1.3:8383371-8383390	MS.gene33131:intron	45.0%
	CAGGCTCTTGTGTGAAAACA+AGG	+	chr1.3:8383409-8383428	MS.gene33131:intron	45.0%
	CCCTTGAAGGAGTAATGTGT+TGG	+	chr1.3:8384366-8384385	MS.gene33131:intron	45.0%
	CCTTGGAATTGGTTAAGGAC+CGG	+	chr1.3:8384632-8384651	MS.gene33131:intron	45.0%
	CGTATTGTTGAGCACAATGG+CGG	-	chr1.3:8383253-8383272	None:intergenic	45.0%
	GAAGGAGTAATGTGTTGGAG+TGG	+	chr1.3:8384371-8384390	MS.gene33131:intron	45.0%
	GAGAAAAAGTGAGGTGAGAG+AGG	+	chr1.3:8383865-8383884	MS.gene33131:intron	45.0%
	GCACGTATTGTTGAGCACAA+TGG	-	chr1.3:8383256-8383275	None:intergenic	45.0%
	TGGTAAAGGAAAGGCAAGAG+AGG	+	chr1.3:8384064-8384083	MS.gene33131:intron	45.0%
!	CTGATGCTTCGAGCTTTTCA+TGG	+	chr1.3:8383893-8383912	MS.gene33131:intron	45.0%
!	TCCATCTCTCTTGCTATCGA+TGG	+	chr1.3:8383006-8383025	MS.gene33131:CDS	45.0%
!	TGTGTGGTTTGCCTTGGAAT+TGG	+	chr1.3:8384621-8384640	MS.gene33131:intron	45.0%
!!	AAAAATATTGAAATTATATT+CGG	+	chr1.3:8384016-8384035	MS.gene33131:intron	5.0%
!!!	AGTATAATTTTATTATTTTT+TGG	-	chr1.3:8383815-8383834	None:intergenic	5.0%
	AAGAGGAATCTAGAGAGGGG+GGG	-	chr1.3:8384424-8384443	None:intergenic	50.0%
	AATCTAGAGAGGGGGGGTAA+GGG	-	chr1.3:8384418-8384437	None:intergenic	50.0%
	CCGGTCCTTAACCAATTCCA+AGG	-	chr1.3:8384635-8384654	None:intergenic	50.0%
	GAAGAGGAATCTAGAGAGGG+GGG	-	chr1.3:8384425-8384444	None:intergenic	50.0%
	GGAATTGGTTAAGGACCGGT+TGG	+	chr1.3:8384636-8384655	MS.gene33131:intron	50.0%
	GGGCTTTCTTTGTGCATGTG+TGG	+	chr1.3:8384605-8384624	MS.gene33131:intron	50.0%
	GTAATGTGTTGGAGTGGCAC+TGG	+	chr1.3:8384377-8384396	MS.gene33131:intron	50.0%
	TCACACAAGAGCCTGTTTCC+AGG	-	chr1.3:8383404-8383423	None:intergenic	50.0%
!	TGTGCATGTGTGGTTTGCCT+TGG	+	chr1.3:8384615-8384634	MS.gene33131:intron	50.0%
	AAGGTCACGGGTTCAAGTCC+TGG	+	chr1.3:8383383-8383402	MS.gene33131:intron	55.0%
	ACAAAAGCTCCCGCATACGC+AGG	-	chr1.3:8383480-8383499	None:intergenic	55.0%
	CAAAAGCTCCCGCATACGCA+GGG	-	chr1.3:8383479-8383498	None:intergenic	55.0%
	CGGGTTCAAGTCCTGGAAAC+AGG	+	chr1.3:8383390-8383409	MS.gene33131:intron	55.0%
	GAATCTAGAGAGGGGGGGTA+AGG	-	chr1.3:8384419-8384438	None:intergenic	55.0%
!	ATGCGGGAGCTTTTGTGCAC+CGG	+	chr1.3:8383484-8383503	MS.gene33131:intron	55.0%
!!!	ATACTTTTAGGGGGGCGCCT+TGG	+	chr1.3:8383329-8383348	MS.gene33131:intron	55.0%
	AGAGAGGGGGGGTAAGGGAA+AGG	-	chr1.3:8384413-8384432	None:intergenic	60.0%
	GAGAGGGGGGGTAAGGGAAA+GGG	-	chr1.3:8384412-8384431	None:intergenic	60.0%
!	CAAATGGTGGGACCCCTTCC+CGG	+	chr1.3:8383452-8383471	MS.gene33131:intron	60.0%
!	TGCGGGAGCTTTTGTGCACC+GGG	+	chr1.3:8383485-8383504	MS.gene33131:intron	60.0%
	CATACGCAGGGTCCGGGAAG+GGG	-	chr1.3:8383467-8383486	None:intergenic	65.0%
	CGGGAAGGGGTCCCACCATT+TGG	-	chr1.3:8383454-8383473	None:intergenic	65.0%
	CTTCCCGGACCCTGCGTATG+CGG	+	chr1.3:8383467-8383486	MS.gene33131:intron	65.0%
	GCATACGCAGGGTCCGGGAA+GGG	-	chr1.3:8383468-8383487	None:intergenic	65.0%
	TTCCCGGACCCTGCGTATGC+GGG	+	chr1.3:8383468-8383487	MS.gene33131:intron	65.0%
	CGCATACGCAGGGTCCGGGA+AGG	-	chr1.3:8383469-8383488	None:intergenic	70.0%
	CTCCCGCATACGCAGGGTCC+GGG	-	chr1.3:8383473-8383492	None:intergenic	70.0%
	GCTCCCGCATACGCAGGGTC+CGG	-	chr1.3:8383474-8383493	None:intergenic	70.0%
!!	AGGGGGGCGCCTTGGCACAA+CGG	+	chr1.3:8383337-8383356	MS.gene33131:intron	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.3	gene	8382833	8384766	8382833	ID=MS.gene33131
chr1.3	mRNA	8382833	8384766	8382833	ID=MS.gene33131.t1;Parent=MS.gene33131
chr1.3	exon	8382833	8382835	8382833	ID=MS.gene33131.t1.exon1;Parent=MS.gene33131.t1
chr1.3	CDS	8382833	8382835	8382833	ID=cds.MS.gene33131.t1;Parent=MS.gene33131.t1
chr1.3	exon	8382928	8383027	8382928	ID=MS.gene33131.t1.exon2;Parent=MS.gene33131.t1
chr1.3	CDS	8382928	8383027	8382928	ID=cds.MS.gene33131.t1;Parent=MS.gene33131.t1
chr1.3	exon	8383588	8383708	8383588	ID=MS.gene33131.t1.exon3;Parent=MS.gene33131.t1
chr1.3	CDS	8383588	8383708	8383588	ID=cds.MS.gene33131.t1;Parent=MS.gene33131.t1
chr1.3	exon	8384676	8384766	8384676	ID=MS.gene33131.t1.exon4;Parent=MS.gene33131.t1
chr1.3	CDS	8384676	8384766	8384676	ID=cds.MS.gene33131.t1;Parent=MS.gene33131.t1

Gene Sequence

>MS.gene33131

ATGGTAAGAGTTTTCTTTCACTTGATTCAATTCTTTCAAATTTCAAATTAGGTCTTCATCGCTAATCACTTGTTAATTAATTGCTTTAATCACAGGCTAACAGTGATCGTCACACCATTATTCTAATTCAAACTTCTCACAGTAGAGCTACCAGAACTTTCATGGATTTTCACTCCATCTCTCTTGCTATCGATGGTAATAATCATCTACTTTACTTCTTTTTCTCAACCTATCACTTCACTTTCATCATTTAGGTTTTGTAGCTATAATCTTGTATTTTATTCTATAAGAAGTTTGAACATCGAACATACTGTTTCAATATGTGGATATTTTGATGATTCATTGCTTCACAGTGATATAGGACAATACATCTGGAAATTATTTTCTAGGTTGTTAATAGGGGAAGATAGCGTGTCGCCGCCATTGTGCTCAACAATACGTGCCTCTATCCGGGATTTACATCCTTTATTATTTTTTCGTATTATATTCTTTGTTGATACTTTTAGGGGGGCGCCTTGGCACAACGGTAAAATTGTTTCAATGTGACTGAAAGGTCACGGGTTCAAGTCCTGGAAACAGGCTCTTGTGTGAAAACAAGGTAAGGTTGCATACAATACACCAAATGGTGGGACCCCTTCCCGGACCCTGCGTATGCGGGAGCTTTTGTGCACCGGGCTGCCCTTTATTCTTTGTTGATACTTTGTATGTTTTCATTATCAGCATTAAATAGAGGTTTTAATCATGTGTTTTTACAGGCATATGTGGACTGTATGAAAGGAAACTGAAGGACTTGAATCCAGCCGTCAGAAATATCTCTTATGATATCATGGATCTCTACAACTTCATAGACGGTCTTGCAGACATGAGTGCTCTAGTGTATGTCTCTCTCTCTCTCAAAATTTTGCATGCATAGGTCTTTAATTTAGATCTATCTGTTAGTACAGAGTACGTACATTATTTGTCTGTGTTTTATGATTGTCCAAAAAATAATAAAATTATACTCTGATAAGAGAAGAGAAAAAATTGATGTTAGAGAAAAAGTGAGGTGAGAGAGGATATACTGATGCTTCGAGCTTTTCATGGTTCAAGAATAAGTTTTTTTTTTTTTCATTAAGTAGTTGCTTGGTCATATCTTGTTGAATTTGGAATAGATATATGATTTGACTGTATTTTATGATTTTAAAAAAATATTGAAATTATATTCGGTGAAAACAAAAGAGAAAAAAGTAAATGGTAAAGGAAAGGCAAGAGAGGATATACTGATGATTAGAGCTTTCCATGATTCAAGAATAAGTTATTTATTCAGTAATTGCGTGCTCATTTCTCATAGAATTTTATGCTGAGCTAGAACTGGACCGTTAGTCTGTTCTGTTTAAAACACTACAATTTGGATCAAGGAAAATAAAAACTTAACTGCCTCTCTGTTGGTAAAGCTAATGTAGACTGTCATTATTTTTCTCCATGAATCAAATGAAAATTAAGAGTATGGGTGAGAACATTGGTAGCAATTGTGAGTTTGAAAGAGGTCTTAAACCCTTGAAGGAGTAATGTGTTGGAGTGGCACTGGTTTGTAACTCCCTTTCCCTTACCCCCCCTCTCTAGATTCCTCTTCTTTACCTGGAGTTAAGGACATAATGAATTGATCATTTGCTGTGTCATAAGTTTGCTTTACCTGTTGTAACCCTCTTGACAAAAATATTAGGAAAATGAAGTGAACTTAGGTAATACCTTTATTCAACTGTCTTATGTATGTGATTGCTCTTTTATATATTGGGCTTTCTTTGTGCATGTGTGGTTTGCCTTGGAATTGGTTAAGGACCGGTTGGTTGTTCTTTACTTGCAGTTATGATGGTTCAAAGCATGCTTACTTTCCCTATGATCGAGAGTGGATTAAGGAACGAACCTTTCAACATTTGAAGAAATTGGCACGTTGA

Protein sequence

>MS.gene33131.t1

MANSDRHTIILIQTSHSRATRTFMDFHSISLAIDGICGLYERKLKDLNPAVRNISYDIMDLYNFIDGLADMSALVYDGSKHAYFPYDREWIKERTFQHLKKLAR