Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85661.t1 | AES73782.1 | 100 | 357 | 0 | 0 | 1 | 357 | 1 | 357 | 1.70E-203 | 718.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85661.t1 | Q8LAZ7 | 84.5 | 355 | 50 | 3 | 7 | 357 | 4 | 357 | 2.7e-170 | 599.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85661.t1 | G7JCC9 | 100.0 | 357 | 0 | 0 | 1 | 357 | 1 | 357 | 1.2e-203 | 718.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene75567 | MS.gene85661 | PPI |
| MS.gene85661 | MS.gene073006 | PPI |
| MS.gene073006 | MS.gene85661 | PPI |
| MS.gene28183 | MS.gene85661 | PPI |
| MS.gene014733 | MS.gene85661 | PPI |
| MS.gene33131 | MS.gene85661 | PPI |
| MS.gene045227 | MS.gene85661 | PPI |
| MS.gene030686 | MS.gene85661 | PPI |
| MS.gene28454 | MS.gene85661 | PPI |
| MS.gene79126 | MS.gene85661 | PPI |
| MS.gene70283 | MS.gene85661 | PPI |
| MS.gene030685 | MS.gene85661 | PPI |
| MS.gene067039 | MS.gene85661 | PPI |
| MS.gene70282 | MS.gene85661 | PPI |
| MS.gene58136 | MS.gene85661 | PPI |
| MS.gene58134 | MS.gene85661 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85661.t1 | MTR_3g108790 | 100.000 | 357 | 0 | 0 | 1 | 357 | 1 | 357 | 0.0 | 746 |
| MS.gene85661.t1 | MTR_8g006650 | 93.421 | 76 | 5 | 0 | 282 | 357 | 2 | 77 | 4.82e-44 | 147 |
| MS.gene85661.t1 | MTR_2g017680 | 42.029 | 207 | 107 | 9 | 58 | 256 | 29 | 230 | 5.05e-38 | 138 |
| MS.gene85661.t1 | MTR_1g019930 | 42.029 | 207 | 107 | 9 | 58 | 256 | 33 | 234 | 5.14e-38 | 138 |
| MS.gene85661.t1 | MTR_8g006645 | 94.828 | 58 | 3 | 0 | 300 | 357 | 90 | 147 | 3.52e-30 | 113 |
| MS.gene85661.t1 | MTR_8g006640 | 100.000 | 28 | 0 | 0 | 132 | 159 | 33 | 60 | 1.45e-15 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85661.t1 | AT1G22920 | 84.507 | 355 | 50 | 3 | 7 | 357 | 4 | 357 | 0.0 | 595 |
| MS.gene85661.t1 | AT1G71230 | 82.720 | 353 | 57 | 3 | 7 | 355 | 4 | 356 | 0.0 | 582 |
| MS.gene85661.t1 | AT1G22920 | 85.714 | 329 | 42 | 3 | 7 | 331 | 4 | 331 | 0.0 | 558 |
| MS.gene85661.t1 | AT1G71230 | 71.429 | 84 | 22 | 1 | 7 | 88 | 4 | 87 | 9.91e-39 | 133 |
| MS.gene85661.t1 | AT5G23540 | 42.029 | 207 | 107 | 9 | 58 | 256 | 28 | 229 | 2.67e-38 | 139 |
| MS.gene85661.t1 | AT5G23540 | 40.541 | 185 | 97 | 9 | 80 | 256 | 1 | 180 | 1.26e-30 | 117 |
Find 82 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTATGGTTGCTGGCTTTC+TGG | 0.019953 | 3.3:+88896761 | MS.gene85661:CDS |
| ACTTTCATCTTCTCCTTTAT+TGG | 0.129137 | 3.3:+88897177 | MS.gene85661:CDS |
| CTTAATAAGATTGAAGATTT+TGG | 0.150257 | 3.3:+88896959 | MS.gene85661:CDS |
| TCACTCACTTCTTTCTTTCT+AGG | 0.165471 | 3.3:-88897436 | None:intergenic |
| TTCTCTTGATTCACACCTTT+TGG | 0.168423 | 3.3:+88897123 | MS.gene85661:CDS |
| CACATCCTGGTTATGGTTGC+TGG | 0.217349 | 3.3:+88896753 | MS.gene85661:CDS |
| CAACTTTCAATCATTGGTTC+AGG | 0.253740 | 3.3:-88899687 | None:intergenic |
| ATCTTCTGTGGAACAAATAT+TGG | 0.263054 | 3.3:+88897146 | MS.gene85661:CDS |
| ATGGTTGTTCACGCGCGTTC+TGG | 0.288201 | 3.3:+88895784 | MS.gene85661:CDS |
| CTTTCATCTTCTCCTTTATT+GGG | 0.292334 | 3.3:+88897178 | MS.gene85661:CDS |
| CAAAATCAACTTTCAATCAT+TGG | 0.293926 | 3.3:-88899693 | None:intergenic |
| GCTGGACAAATCTCGGATTT+AGG | 0.296056 | 3.3:+88897217 | MS.gene85661:CDS |
| AATTGGCACACTCGCGTTTC+GGG | 0.311696 | 3.3:+88897395 | MS.gene85661:CDS |
| GTTATGGTTGCTGGCTTTCT+GGG | 0.313990 | 3.3:+88896762 | MS.gene85661:CDS |
| AAGTGGAGATTGGGGCCTTC+AGG | 0.317098 | 3.3:+88896876 | MS.gene85661:CDS |
| CTGCTGGGAAAGTGGAGATT+GGG | 0.317739 | 3.3:+88896867 | MS.gene85661:CDS |
| GATGTTGAATCAGCAATTTC+AGG | 0.320865 | 3.3:+88896802 | MS.gene85661:CDS |
| TGGCTTATCGCGTTGGAATT+CGG | 0.334958 | 3.3:-88895701 | None:intergenic |
| CAATTGGCACACTCGCGTTT+CGG | 0.340334 | 3.3:+88897394 | MS.gene85661:CDS |
| ATAGTTTGATACTCAGAAAT+AGG | 0.343139 | 3.3:-88896932 | None:intergenic |
| TCAGCAGGCTTATAACCTTC+AGG | 0.347284 | 3.3:-88896905 | None:intergenic |
| TATCATTCACATCCTGGTTA+TGG | 0.365703 | 3.3:+88896746 | MS.gene85661:CDS |
| TAGTCTCCATTGCCCAATAA+AGG | 0.383654 | 3.3:-88897190 | None:intergenic |
| TCTGCTGGGAAAGTGGAGAT+TGG | 0.394695 | 3.3:+88896866 | MS.gene85661:CDS |
| CTTGATGAACAGAGTTGAAC+AGG | 0.395941 | 3.3:-88899635 | None:intergenic |
| AAATCTTCAATCTTATTAAG+AGG | 0.397996 | 3.3:-88896956 | None:intergenic |
| TGGTGGAACAATCGAAGTTA+TGG | 0.402025 | 3.3:+88895804 | MS.gene85661:CDS |
| CCAGCAGAAACAGTTCTTGT+CGG | 0.420083 | 3.3:-88896851 | None:intergenic |
| TGCTGATTCCATCATCGTTA+TGG | 0.425530 | 3.3:+88895849 | MS.gene85661:CDS |
| CGAGTTTCAGTACCTTCAAC+AGG | 0.455152 | 3.3:-88895886 | None:intergenic |
| AACTGTTTCTGCTGGGAAAG+TGG | 0.456029 | 3.3:+88896859 | MS.gene85661:CDS |
| GGTGGAACAATCGAAGTTAT+GGG | 0.457084 | 3.3:+88895805 | MS.gene85661:CDS |
| TTGTTGGATGCAGGTAATCA+AGG | 0.461466 | 3.3:+88899608 | MS.gene85661:intron |
| CCGACAAGAACTGTTTCTGC+TGG | 0.464062 | 3.3:+88896851 | MS.gene85661:CDS |
| CGTCTGAAGGAGTTTCCATT+GGG | 0.464772 | 3.3:-88895645 | None:intergenic |
| ACAAAGACGAACCTGTTTGT+TGG | 0.470842 | 3.3:-88895959 | None:intergenic |
| TCGCCCATGGCTTATCGCGT+TGG | 0.472321 | 3.3:-88895708 | None:intergenic |
| TCTTCTCCTTTATTGGGCAA+TGG | 0.485148 | 3.3:+88897184 | MS.gene85661:CDS |
| ACTTCTTTCTTTCTAGGTGT+AGG | 0.490673 | 3.3:-88897430 | None:intergenic |
| CTATGTAGCTGGACAAATCT+CGG | 0.498092 | 3.3:+88897210 | MS.gene85661:CDS |
| CAGCAGGCTTATAACCTTCA+GGG | 0.500444 | 3.3:-88896904 | None:intergenic |
| TGCACTCGCTCTTCTCAAGA+TGG | 0.503881 | 3.3:+88895765 | MS.gene85661:CDS |
| TCTTCTGTGGAACAAATATT+GGG | 0.505161 | 3.3:+88897147 | MS.gene85661:CDS |
| TTATTCTCAGACCAACAAAC+AGG | 0.505190 | 3.3:+88895948 | MS.gene85661:CDS |
| AACTTTCAATCATTGGTTCA+GGG | 0.506922 | 3.3:-88899686 | None:intergenic |
| GGCAATGGAGACTATGTAGC+TGG | 0.507362 | 3.3:+88897199 | MS.gene85661:CDS |
| CAGCGATAGCACAACAAACA+TGG | 0.519296 | 3.3:+88895602 | MS.gene85661:CDS |
| AAAAGCATCCATAACGATGA+TGG | 0.520346 | 3.3:-88895857 | None:intergenic |
| GTTGTTCACGCGCGTTCTGG+TGG | 0.524621 | 3.3:+88895787 | MS.gene85661:CDS |
| GTGTGTGTAGGCTGGGAGGT+TGG | 0.525878 | 3.3:+88896706 | MS.gene85661:intron |
| TCGTCTGAAGGAGTTTCCAT+TGG | 0.528372 | 3.3:-88895646 | None:intergenic |
| AATTCCAACGCGATAAGCCA+TGG | 0.531498 | 3.3:+88895704 | MS.gene85661:CDS |
| AGAACAAGCAGAGAATCAAT+TGG | 0.538558 | 3.3:+88897378 | MS.gene85661:CDS |
| ACACTCGCGTTTCGGGCCAC+TGG | 0.541532 | 3.3:+88897402 | MS.gene85661:CDS |
| AGCTGATGCTTATGAATACA+TGG | 0.546058 | 3.3:+88895921 | MS.gene85661:CDS |
| GGATGGTATCATTCACATCC+TGG | 0.547109 | 3.3:+88896740 | MS.gene85661:CDS |
| TGCTGGGAAAGTGGAGATTG+GGG | 0.547636 | 3.3:+88896868 | MS.gene85661:CDS |
| CTTGTCCTGCTTCGTCGTAG+TGG | 0.547793 | 3.3:-88895678 | None:intergenic |
| ATCTTCCACTACGACGAAGC+AGG | 0.552852 | 3.3:+88895673 | MS.gene85661:CDS |
| GGTTGGAGAATGTCGTGGGA+TGG | 0.560107 | 3.3:+88896723 | MS.gene85661:CDS |
| AGTGCATGGTTTAATGTCAC+AGG | 0.563487 | 3.3:+88899503 | MS.gene85661:CDS |
| CGACAAGAACTGTTTCTGCT+GGG | 0.564055 | 3.3:+88896852 | MS.gene85661:CDS |
| GAAAGCCAGCAACCATAACC+AGG | 0.566264 | 3.3:-88896758 | None:intergenic |
| GGGAGGTTGGAGAATGTCGT+GGG | 0.567445 | 3.3:+88896719 | MS.gene85661:CDS |
| TGTTCCACAGAAGATCCAAA+AGG | 0.567458 | 3.3:-88897138 | None:intergenic |
| ACCTTCAGGGTAAGTCCTGA+AGG | 0.577000 | 3.3:-88896891 | None:intergenic |
| GAAGTTATGGGTCTTATGCA+AGG | 0.593430 | 3.3:+88895817 | MS.gene85661:CDS |
| ATAACTGTTGAACAAGTGCA+TGG | 0.600293 | 3.3:+88899489 | MS.gene85661:CDS |
| TAGTGAGGATCGTTCGCCCA+TGG | 0.605646 | 3.3:-88895721 | None:intergenic |
| TCAGAAATAGGATCATCAGC+AGG | 0.608578 | 3.3:-88896920 | None:intergenic |
| TCACGAGTGATCTTAGCAAG+TGG | 0.611123 | 3.3:-88899456 | None:intergenic |
| ATTCCAACGCGATAAGCCAT+GGG | 0.616421 | 3.3:+88895705 | MS.gene85661:CDS |
| TGGGAGGTTGGAGAATGTCG+TGG | 0.620298 | 3.3:+88896718 | MS.gene85661:CDS |
| GCCTTCAGGACTTACCCTGA+AGG | 0.623505 | 3.3:+88896890 | MS.gene85661:CDS |
| TGGAAGATTGAATCGTCTGA+AGG | 0.625354 | 3.3:-88895658 | None:intergenic |
| AGAGAACAACATAATCCCAA+TGG | 0.625568 | 3.3:+88895630 | MS.gene85661:CDS |
| GAATAGAAACCTGTTTACAA+TGG | 0.626299 | 3.3:-88896985 | None:intergenic |
| CTTAAAGTAAGTGATATCCA+AGG | 0.627727 | 3.3:-88897098 | None:intergenic |
| ATTTGTGTGTGTAGGCTGGG+AGG | 0.631889 | 3.3:+88896702 | MS.gene85661:intron |
| AGCGATAGCACAACAAACAT+GGG | 0.650776 | 3.3:+88895603 | MS.gene85661:CDS |
| CTAGGTGTAGGTGCTACCAG+TGG | 0.656542 | 3.3:-88897418 | None:intergenic |
| TTGACACGCTTGAAGTAGTG+AGG | 0.659789 | 3.3:-88895736 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATCAAAATTGTAATT+AGG | - | chr3.3:88896497-88896516 | None:intergenic | 10.0% |
| !! | AAAAATCAAAATTGTAATTA+GGG | - | chr3.3:88896114-88896133 | None:intergenic | 10.0% |
| !! | AAAAATCAATATTGTAATTA+GGG | - | chr3.3:88896595-88896614 | None:intergenic | 10.0% |
| !!! | TTTAAGATATTAGAATTTAA+AGG | - | chr3.3:88898830-88898849 | None:intergenic | 10.0% |
| !! | AAATAAGTTCAATAAGATTT+GGG | - | chr3.3:88896202-88896221 | None:intergenic | 15.0% |
| !! | AATTATCGCATAAAAAATAA+TGG | - | chr3.3:88897255-88897274 | None:intergenic | 15.0% |
| !! | ATCAAATATATTGTATCATT+TGG | - | chr3.3:88896321-88896340 | None:intergenic | 15.0% |
| !! | GAAAAATCAAAATTGTAATT+AGG | - | chr3.3:88896115-88896134 | None:intergenic | 15.0% |
| !! | GAAAAATCAATATTGTAATT+AGG | - | chr3.3:88896596-88896615 | None:intergenic | 15.0% |
| !! | TAAATAAGTTCAATAAGATT+TGG | - | chr3.3:88896203-88896222 | None:intergenic | 15.0% |
| !! | TAATTATGAATATCTCAATT+GGG | + | chr3.3:88897327-88897346 | MS.gene85661:intron | 15.0% |
| !!! | TAGATAAATGTTTTTTAGTT+CGG | + | chr3.3:88899280-88899299 | MS.gene85661:intron | 15.0% |
| !!! | TTGTTTGACTTTTTTTTATT+GGG | + | chr3.3:88898312-88898331 | MS.gene85661:intron | 15.0% |
| !!! | TTTCTAACATCAAAATATTT+TGG | + | chr3.3:88898272-88898291 | MS.gene85661:intron | 15.0% |
| !! | AAAAATCACAATTGTAATCA+GGG | - | chr3.3:88896533-88896552 | None:intergenic | 20.0% |
| !! | AAATCTTCAATCTTATTAAG+AGG | - | chr3.3:88896959-88896978 | None:intergenic | 20.0% |
| !! | AAGAAAGTAAAGTACAATTT+AGG | - | chr3.3:88898875-88898894 | None:intergenic | 20.0% |
| !! | ATGTTGATGTTAGAAAATAT+TGG | - | chr3.3:88898194-88898213 | None:intergenic | 20.0% |
| !! | CAAAATCACAGTTATAATTA+GGG | - | chr3.3:88896667-88896686 | None:intergenic | 20.0% |
| !! | CCAAAATAAAGAAGTTAAAA+AGG | - | chr3.3:88898241-88898260 | None:intergenic | 20.0% |
| !! | GAAGATAAACAGATAAATAA+TGG | - | chr3.3:88898061-88898080 | None:intergenic | 20.0% |
| !! | GTAATTATGAATATCTCAAT+TGG | + | chr3.3:88897326-88897345 | MS.gene85661:intron | 20.0% |
| !! | TATCTTAAAAAAACAGTCAT+TGG | + | chr3.3:88898841-88898860 | MS.gene85661:intron | 20.0% |
| !! | TATGTTAAGAAAACAATAGT+GGG | + | chr3.3:88897789-88897808 | MS.gene85661:intron | 20.0% |
| !! | TCAAAATCACAGTTATAATT+AGG | - | chr3.3:88896668-88896687 | None:intergenic | 20.0% |
| !! | TTACAAAATATAACATTGAC+AGG | - | chr3.3:88897310-88897329 | None:intergenic | 20.0% |
| !! | TTATGTTAAGAAAACAATAG+TGG | + | chr3.3:88897788-88897807 | MS.gene85661:intron | 20.0% |
| !!! | AAAAAGTGTTAAGTTTTGTT+GGG | + | chr3.3:88897865-88897884 | MS.gene85661:intron | 20.0% |
| !!! | ACTTTTTGTTCATAAATGTT+TGG | + | chr3.3:88897721-88897740 | MS.gene85661:intron | 20.0% |
| !!! | ATATTTTTTCTCTTTTTGGT+AGG | - | chr3.3:88899548-88899567 | None:intergenic | 20.0% |
| !!! | CCTTTTTAACTTCTTTATTT+TGG | + | chr3.3:88898238-88898257 | MS.gene85661:intron | 20.0% |
| !!! | CTGTTGTTTAAAACTTTTTA+GGG | - | chr3.3:88896145-88896164 | None:intergenic | 20.0% |
| !!! | CTTAATAAGATTGAAGATTT+TGG | + | chr3.3:88896959-88896978 | MS.gene85661:CDS | 20.0% |
| !!! | GGATAGAATATGATTTTTTA+GGG | - | chr3.3:88898446-88898465 | None:intergenic | 20.0% |
| !!! | GTTGTTTGACTTTTTTTTAT+TGG | + | chr3.3:88898311-88898330 | MS.gene85661:intron | 20.0% |
| !!! | TAAAAAGTGTTAAGTTTTGT+TGG | + | chr3.3:88897864-88897883 | MS.gene85661:intron | 20.0% |
| !!! | TAAAACTTTTTAGGGTTTAA+GGG | - | chr3.3:88896137-88896156 | None:intergenic | 20.0% |
| !!! | TCACATATTTTTTCTCTTTT+TGG | - | chr3.3:88899552-88899571 | None:intergenic | 20.0% |
| !!! | TGGATAGAATATGATTTTTT+AGG | - | chr3.3:88898447-88898466 | None:intergenic | 20.0% |
| !!! | TGTTTGACTTTTTTTTATTG+GGG | + | chr3.3:88898313-88898332 | MS.gene85661:intron | 20.0% |
| !!! | TTAAAACTTTTTAGGGTTTA+AGG | - | chr3.3:88896138-88896157 | None:intergenic | 20.0% |
| !!! | TTTTATGCGATAATTTGTTT+TGG | + | chr3.3:88897260-88897279 | MS.gene85661:intron | 20.0% |
| !!! | TTTTCTAACATCAACATAAT+AGG | + | chr3.3:88898197-88898216 | MS.gene85661:intron | 20.0% |
| !!! | TTTTTTTCAGTATTATTCCT+TGG | + | chr3.3:88897081-88897100 | MS.gene85661:intron | 20.0% |
| ! | AAATTCAGAGAAAACTAATC+AGG | - | chr3.3:88898966-88898985 | None:intergenic | 25.0% |
| ! | AATATACTCTAATTAGGGTT+AGG | - | chr3.3:88896013-88896032 | None:intergenic | 25.0% |
| ! | AATGTACTCTGTCTAATTAT+TGG | + | chr3.3:88897483-88897502 | MS.gene85661:intron | 25.0% |
| ! | ACAAAAAACAAGAGTTTGTA+GGG | - | chr3.3:88897033-88897052 | None:intergenic | 25.0% |
| ! | AGATATACATATCTAGTCAT+TGG | + | chr3.3:88897651-88897670 | MS.gene85661:intron | 25.0% |
| ! | AGGACAGTTACAATTATAAA+AGG | + | chr3.3:88898772-88898791 | MS.gene85661:intron | 25.0% |
| ! | ATAGTTTGATACTCAGAAAT+AGG | - | chr3.3:88896935-88896954 | None:intergenic | 25.0% |
| ! | ATATACTCTAATTAGGGTTA+GGG | - | chr3.3:88896012-88896031 | None:intergenic | 25.0% |
| ! | ATTGTACTTTACTTTCTTCA+TGG | + | chr3.3:88898877-88898896 | MS.gene85661:intron | 25.0% |
| ! | CAAAATTGTAATTAGGGTTA+GGG | - | chr3.3:88896108-88896127 | None:intergenic | 25.0% |
| ! | CAATATTGTAATTAGGGTTA+GGG | - | chr3.3:88896589-88896608 | None:intergenic | 25.0% |
| ! | CACACAAATATCAACTAATT+AGG | - | chr3.3:88896691-88896710 | None:intergenic | 25.0% |
| ! | GAAAAATCACAATTGTAATC+AGG | - | chr3.3:88896534-88896553 | None:intergenic | 25.0% |
| ! | GGCAAAATATACTCTAATTA+GGG | - | chr3.3:88896018-88896037 | None:intergenic | 25.0% |
| ! | TACAAAAAACAAGAGTTTGT+AGG | - | chr3.3:88897034-88897053 | None:intergenic | 25.0% |
| ! | TAGTGATAGATAACATCAAA+TGG | - | chr3.3:88899376-88899395 | None:intergenic | 25.0% |
| ! | TCAAAATTGTAATTAGGGTT+AGG | - | chr3.3:88896109-88896128 | None:intergenic | 25.0% |
| ! | TCAATATTGTAATTAGGGTT+AGG | - | chr3.3:88896590-88896609 | None:intergenic | 25.0% |
| ! | TCTAGATGGCTAAAATATTA+CGG | + | chr3.3:88899579-88899598 | MS.gene85661:intron | 25.0% |
| ! | TCTGTTAAAACAGAGAAAAA+CGG | + | chr3.3:88896401-88896420 | MS.gene85661:intron | 25.0% |
| ! | TTATCTATATCTGTTCGTAA+TGG | - | chr3.3:88899267-88899286 | None:intergenic | 25.0% |
| !! | AATATTACGGTGAATTTTGT+TGG | + | chr3.3:88899592-88899611 | MS.gene85661:intron | 25.0% |
| !! | ATTTAGTGTTTCTGTAATCT+GGG | + | chr3.3:88898082-88898101 | MS.gene85661:intron | 25.0% |
| !! | TATGAACAAAAAGTATACTG+TGG | - | chr3.3:88897715-88897734 | None:intergenic | 25.0% |
| !! | TGTAACTGTCCTTTTATAAT+AGG | - | chr3.3:88898764-88898783 | None:intergenic | 25.0% |
| !! | TTGCAGTTATCTTTTACTTT+TGG | + | chr3.3:88898013-88898032 | MS.gene85661:intron | 25.0% |
| !!! | ACTTTTTTTTATTGGGGAAT+GGG | + | chr3.3:88898319-88898338 | MS.gene85661:intron | 25.0% |
| !!! | CCTAAAAAGTTTTAAACAAC+AGG | + | chr3.3:88896143-88896162 | MS.gene85661:intron | 25.0% |
| !!! | CCTGTTGTTTAAAACTTTTT+AGG | - | chr3.3:88896146-88896165 | None:intergenic | 25.0% |
| !!! | GAATATGATTTTTTAGGGTT+TGG | - | chr3.3:88898441-88898460 | None:intergenic | 25.0% |
| AACAGAGTGAACAAAAATCA+CGG | - | chr3.3:88896387-88896406 | None:intergenic | 30.0% | |
| ACTTTCATCTTCTCCTTTAT+TGG | + | chr3.3:88897177-88897196 | MS.gene85661:CDS | 30.0% | |
| AGAAGTTAAAAAGGAGACAT+AGG | - | chr3.3:88898232-88898251 | None:intergenic | 30.0% | |
| AGGTACAATAAACAAGTAGA+GGG | - | chr3.3:88898946-88898965 | None:intergenic | 30.0% | |
| ATAATTAGGGTTAGGGTTAA+AGG | - | chr3.3:88896654-88896673 | None:intergenic | 30.0% | |
| ATCACATTTGTAATCAGTGT+TGG | - | chr3.3:88896626-88896645 | None:intergenic | 30.0% | |
| ATCTTCTGTGGAACAAATAT+TGG | + | chr3.3:88897146-88897165 | MS.gene85661:CDS | 30.0% | |
| CACAGTTATAATTAGGGTTA+GGG | - | chr3.3:88896661-88896680 | None:intergenic | 30.0% | |
| CAGATTACAGAAACACTAAA+TGG | - | chr3.3:88898083-88898102 | None:intergenic | 30.0% | |
| CATGGCTGAATATTATAAAC+AGG | - | chr3.3:88897686-88897705 | None:intergenic | 30.0% | |
| CTCTAAACAAAAACACAACA+TGG | - | chr3.3:88898698-88898717 | None:intergenic | 30.0% | |
| CTTAAAGTAAGTGATATCCA+AGG | - | chr3.3:88897101-88897120 | None:intergenic | 30.0% | |
| CTTTCATCTTCTCCTTTATT+GGG | + | chr3.3:88897178-88897197 | MS.gene85661:CDS | 30.0% | |
| GAATAGAAACCTGTTTACAA+TGG | - | chr3.3:88896988-88897007 | None:intergenic | 30.0% | |
| GGGCAAAATATACTCTAATT+AGG | - | chr3.3:88896019-88896038 | None:intergenic | 30.0% | |
| GGTTTACGGGATTATAATTA+CGG | - | chr3.3:88896052-88896071 | None:intergenic | 30.0% | |
| GTGCAAAATATCAACTGATA+AGG | - | chr3.3:88896556-88896575 | None:intergenic | 30.0% | |
| TAATATGAGAGAATGTGTGA+TGG | - | chr3.3:88899110-88899129 | None:intergenic | 30.0% | |
| TAATTAGGGTTAGGGTTTAA+GGG | - | chr3.3:88896100-88896119 | None:intergenic | 30.0% | |
| TATAATAGGAACCAATGGAT+GGG | - | chr3.3:88898750-88898769 | None:intergenic | 30.0% | |
| TATAATTACGGCAGCTAATT+GGG | - | chr3.3:88896040-88896059 | None:intergenic | 30.0% | |
| TCACAGTTATAATTAGGGTT+AGG | - | chr3.3:88896662-88896681 | None:intergenic | 30.0% | |
| TCTTCTGTGGAACAAATATT+GGG | + | chr3.3:88897147-88897166 | MS.gene85661:CDS | 30.0% | |
| TCTTTATTGAGAGTTTCAGA+TGG | + | chr3.3:88897510-88897529 | MS.gene85661:intron | 30.0% | |
| TTATAATAGGAACCAATGGA+TGG | - | chr3.3:88898751-88898770 | None:intergenic | 30.0% | |
| TTATAATTACGGCAGCTAAT+TGG | - | chr3.3:88896041-88896060 | None:intergenic | 30.0% | |
| TTCCTAAAATCACGTTACAA+TGG | - | chr3.3:88898467-88898486 | None:intergenic | 30.0% | |
| ! | AGTAAATCTAAGATGACATG+AGG | - | chr3.3:88899017-88899036 | None:intergenic | 30.0% |
| ! | ATCCATTGTAACGTGATTTT+AGG | + | chr3.3:88898462-88898481 | MS.gene85661:intron | 30.0% |
| ! | ATCTTTTGGCGTTAGTTATA+TGG | + | chr3.3:88897931-88897950 | MS.gene85661:intron | 30.0% |
| ! | CAAATTCTCAAATGATTTGC+AGG | + | chr3.3:88899425-88899444 | MS.gene85661:intron | 30.0% |
| ! | CATTTAGTGTTTCTGTAATC+TGG | + | chr3.3:88898081-88898100 | MS.gene85661:intron | 30.0% |
| ! | CCTTTTATAATAGGAACCAA+TGG | - | chr3.3:88898755-88898774 | None:intergenic | 30.0% |
| ! | TAGTTGATATTTGTGTGTGT+AGG | + | chr3.3:88896694-88896713 | MS.gene85661:intron | 30.0% |
| ! | TTTGGATGCATGCTATTTAT+TGG | - | chr3.3:88898423-88898442 | None:intergenic | 30.0% |
| ! | TTTTGTTGGGATGAAATAGA+GGG | + | chr3.3:88897878-88897897 | MS.gene85661:intron | 30.0% |
| !! | AACTTTCAATCATTGGTTCA+GGG | - | chr3.3:88899689-88899708 | None:intergenic | 30.0% |
| !! | CCATTGGTTCCTATTATAAA+AGG | + | chr3.3:88898752-88898771 | MS.gene85661:intron | 30.0% |
| !! | GTATCTTTTGGAGAATCTTT+TGG | + | chr3.3:88897917-88897936 | MS.gene85661:intron | 30.0% |
| !! | TGTAATCAGTGTTGGTTTAA+GGG | - | chr3.3:88896618-88896637 | None:intergenic | 30.0% |
| !! | TGTTGTGTTTTTGTTTAGAG+AGG | + | chr3.3:88898698-88898717 | MS.gene85661:intron | 30.0% |
| !! | TTGTAATCAGTGTTGGTTTA+AGG | - | chr3.3:88896619-88896638 | None:intergenic | 30.0% |
| !!! | CTTCTTTATTTTGGTTGCAT+TGG | + | chr3.3:88898247-88898266 | MS.gene85661:intron | 30.0% |
| !!! | GACTTTTTTTTATTGGGGAA+TGG | + | chr3.3:88898318-88898337 | MS.gene85661:intron | 30.0% |
| !!! | GCAAACAACTTTTTTGTCAT+TGG | - | chr3.3:88898666-88898685 | None:intergenic | 30.0% |
| !!! | TTTTTTCTCTTTTTGGTAGG+AGG | - | chr3.3:88899545-88899564 | None:intergenic | 30.0% |
| AAAATGTGTCACCGCAAAAA+CGG | - | chr3.3:88896459-88896478 | None:intergenic | 35.0% | |
| AATACTACAAAGCCCATGTT+TGG | + | chr3.3:88898629-88898648 | MS.gene85661:intron | 35.0% | |
| AATCAACCGTGATTAGGATT+AGG | - | chr3.3:88896074-88896093 | None:intergenic | 35.0% | |
| ACTTCTTTCTTTCTAGGTGT+AGG | - | chr3.3:88897433-88897452 | None:intergenic | 35.0% | |
| AGAACAAGCAGAGAATCAAT+TGG | + | chr3.3:88897378-88897397 | MS.gene85661:CDS | 35.0% | |
| AGAGAACAACATAATCCCAA+TGG | + | chr3.3:88895630-88895649 | MS.gene85661:CDS | 35.0% | |
| AGAGTTTGTAGGGTTTGAAA+TGG | - | chr3.3:88897023-88897042 | None:intergenic | 35.0% | |
| AGCTGATGCTTATGAATACA+TGG | + | chr3.3:88895921-88895940 | MS.gene85661:CDS | 35.0% | |
| ATAACTGTTGAACAAGTGCA+TGG | + | chr3.3:88899489-88899508 | MS.gene85661:CDS | 35.0% | |
| ATAATTACGGCAGCTAATTG+GGG | - | chr3.3:88896039-88896058 | None:intergenic | 35.0% | |
| ATATATCCCTAGAGCATGAA+TGG | - | chr3.3:88897629-88897648 | None:intergenic | 35.0% | |
| ATCAACCGTGATTAGGATTA+GGG | - | chr3.3:88896073-88896092 | None:intergenic | 35.0% | |
| ATGGAAAATGAAGAATGACG+AGG | - | chr3.3:88899248-88899267 | None:intergenic | 35.0% | |
| ATTGTAATTAGGGTCAAGCA+AGG | - | chr3.3:88896486-88896505 | None:intergenic | 35.0% | |
| CACAATTGTAATCAGGGATA+GGG | - | chr3.3:88896527-88896546 | None:intergenic | 35.0% | |
| CAGGTACAATAAACAAGTAG+AGG | - | chr3.3:88898947-88898966 | None:intergenic | 35.0% | |
| CAGTTTATCGTGTATTTGCA+TGG | - | chr3.3:88899349-88899368 | None:intergenic | 35.0% | |
| CATGGCATCTTAGATTTACT+TGG | + | chr3.3:88898895-88898914 | MS.gene85661:intron | 35.0% | |
| CTCTCGAAGCATAAAAATGT+TGG | - | chr3.3:88898145-88898164 | None:intergenic | 35.0% | |
| GATGTTGAATCAGCAATTTC+AGG | + | chr3.3:88896802-88896821 | MS.gene85661:CDS | 35.0% | |
| GTAAACCCTAATCCTAATCA+CGG | + | chr3.3:88896065-88896084 | MS.gene85661:intron | 35.0% | |
| GTAATTAGGGTTAGGGTTTA+AGG | - | chr3.3:88896101-88896120 | None:intergenic | 35.0% | |
| GTGATTAGGATTAGGGTTTA+CGG | - | chr3.3:88896066-88896085 | None:intergenic | 35.0% | |
| TAGAATCCATTCATGCTCTA+GGG | + | chr3.3:88897620-88897639 | MS.gene85661:intron | 35.0% | |
| TATCATTCACATCCTGGTTA+TGG | + | chr3.3:88896746-88896765 | MS.gene85661:CDS | 35.0% | |
| TATTCTGATACAGCACTGTA+TGG | - | chr3.3:88899185-88899204 | None:intergenic | 35.0% | |
| TCACAATTGTAATCAGGGAT+AGG | - | chr3.3:88896528-88896547 | None:intergenic | 35.0% | |
| TCACTCACTTCTTTCTTTCT+AGG | - | chr3.3:88897439-88897458 | None:intergenic | 35.0% | |
| TGATTAGGATTAGGGTTTAC+GGG | - | chr3.3:88896065-88896084 | None:intergenic | 35.0% | |
| TGTATTTGCATGGTCAAGAT+TGG | - | chr3.3:88899339-88899358 | None:intergenic | 35.0% | |
| TTATTCTCAGACCAACAAAC+AGG | + | chr3.3:88895948-88895967 | MS.gene85661:CDS | 35.0% | |
| TTTGGAGGGAAAAATGCTTT+GGG | - | chr3.3:88898515-88898534 | None:intergenic | 35.0% | |
| ! | AAGAAAACAATAGTGGGAAG+AGG | + | chr3.3:88897795-88897814 | MS.gene85661:intron | 35.0% |
| ! | ACTTCATGCAAAAGCATGTT+TGG | - | chr3.3:88898533-88898552 | None:intergenic | 35.0% |
| ! | AGAAAACAATAGTGGGAAGA+GGG | + | chr3.3:88897796-88897815 | MS.gene85661:intron | 35.0% |
| ! | AGTTTGTAGGGTTTGAAATG+GGG | - | chr3.3:88897021-88897040 | None:intergenic | 35.0% |
| ! | AGTTTTCTCTGAATTTCTGC+TGG | + | chr3.3:88898970-88898989 | MS.gene85661:intron | 35.0% |
| ! | CACTTGTTCATTTGAAGTCT+AGG | + | chr3.3:88897548-88897567 | MS.gene85661:intron | 35.0% |
| ! | GAGTTTGTAGGGTTTGAAAT+GGG | - | chr3.3:88897022-88897041 | None:intergenic | 35.0% |
| ! | TAGAGCATGAATGGATTCTA+CGG | - | chr3.3:88897620-88897639 | None:intergenic | 35.0% |
| ! | TTCTCTTGATTCACACCTTT+TGG | + | chr3.3:88897123-88897142 | MS.gene85661:CDS | 35.0% |
| !! | AAAAGCATCCATAACGATGA+TGG | - | chr3.3:88895860-88895879 | None:intergenic | 35.0% |
| !! | CAACTTTCAATCATTGGTTC+AGG | - | chr3.3:88899690-88899709 | None:intergenic | 35.0% |
| !! | GTTTTGTTGGGATGAAATAG+AGG | + | chr3.3:88897877-88897896 | MS.gene85661:intron | 35.0% |
| !!! | TTTTAGTTCGGAGCAATCTT+CGG | + | chr3.3:88899292-88899311 | MS.gene85661:intron | 35.0% |
| !!! | TTTTGGTGTCCATTGTAAAC+AGG | + | chr3.3:88896976-88896995 | MS.gene85661:CDS | 35.0% |
| AAATGTTTGGACTCCAACTG+TGG | + | chr3.3:88897734-88897753 | MS.gene85661:intron | 40.0% | |
| AATGTTTGGACTCCAACTGT+GGG | + | chr3.3:88897735-88897754 | MS.gene85661:intron | 40.0% | |
| ACAAAGACGAACCTGTTTGT+TGG | - | chr3.3:88895962-88895981 | None:intergenic | 40.0% | |
| AGCGATAGCACAACAAACAT+GGG | + | chr3.3:88895603-88895622 | MS.gene85661:CDS | 40.0% | |
| AGTATACTGTGGTACACTCA+TGG | - | chr3.3:88897704-88897723 | None:intergenic | 40.0% | |
| AGTGCATGGTTTAATGTCAC+AGG | + | chr3.3:88899503-88899522 | MS.gene85661:CDS | 40.0% | |
| ATGCATAGCACACTAGTAGA+GGG | - | chr3.3:88899068-88899087 | None:intergenic | 40.0% | |
| CAAAAACGGCTGCAACATAA+AGG | - | chr3.3:88896445-88896464 | None:intergenic | 40.0% | |
| CAGAGAATAGTGTTCTCTGT+AGG | + | chr3.3:88897955-88897974 | MS.gene85661:intron | 40.0% | |
| CTATGTAGCTGGACAAATCT+CGG | + | chr3.3:88897210-88897229 | MS.gene85661:CDS | 40.0% | |
| CTTGATGAACAGAGTTGAAC+AGG | - | chr3.3:88899638-88899657 | None:intergenic | 40.0% | |
| GATATTTGTGTGTGTAGGCT+GGG | + | chr3.3:88896699-88896718 | MS.gene85661:intron | 40.0% | |
| GCAAATGTTCAACATCCAGT+CGG | - | chr3.3:88898392-88898411 | None:intergenic | 40.0% | |
| GGGAAAAATCAACCGTGATT+AGG | - | chr3.3:88896080-88896099 | None:intergenic | 40.0% | |
| GGTGGAACAATCGAAGTTAT+GGG | + | chr3.3:88895805-88895824 | MS.gene85661:CDS | 40.0% | |
| GTAATCAGGGATAGGGTTTA+CGG | - | chr3.3:88896520-88896539 | None:intergenic | 40.0% | |
| GTAGAATCCATTCATGCTCT+AGG | + | chr3.3:88897619-88897638 | MS.gene85661:intron | 40.0% | |
| GTTGTTAATGTCCCATCCAT+TGG | + | chr3.3:88898736-88898755 | MS.gene85661:intron | 40.0% | |
| GTTTGGAGGGAAAAATGCTT+TGG | - | chr3.3:88898516-88898535 | None:intergenic | 40.0% | |
| TAGTCTCCATTGCCCAATAA+AGG | - | chr3.3:88897193-88897212 | None:intergenic | 40.0% | |
| TAGTGTTCTCTGTAGGAACT+TGG | + | chr3.3:88897962-88897981 | MS.gene85661:intron | 40.0% | |
| TATGCATAGCACACTAGTAG+AGG | - | chr3.3:88899069-88899088 | None:intergenic | 40.0% | |
| TCAATCACAACCGCCAAAAA+CGG | - | chr3.3:88896830-88896849 | None:intergenic | 40.0% | |
| TCAGAAATAGGATCATCAGC+AGG | - | chr3.3:88896923-88896942 | None:intergenic | 40.0% | |
| TCTTCTCCTTTATTGGGCAA+TGG | + | chr3.3:88897184-88897203 | MS.gene85661:CDS | 40.0% | |
| TGATATTTGTGTGTGTAGGC+TGG | + | chr3.3:88896698-88896717 | MS.gene85661:intron | 40.0% | |
| TGGAAGATTGAATCGTCTGA+AGG | - | chr3.3:88895661-88895680 | None:intergenic | 40.0% | |
| TGGTGGAACAATCGAAGTTA+TGG | + | chr3.3:88895804-88895823 | MS.gene85661:CDS | 40.0% | |
| TGTTCCACAGAAGATCCAAA+AGG | - | chr3.3:88897141-88897160 | None:intergenic | 40.0% | |
| TTGTTGGATGCAGGTAATCA+AGG | + | chr3.3:88899608-88899627 | MS.gene85661:intron | 40.0% | |
| ! | ATGCTATTTATTGGCTGAGC+TGG | - | chr3.3:88898414-88898433 | None:intergenic | 40.0% |
| ! | CAACATAAAGGTATAGGTGG+TGG | - | chr3.3:88896433-88896452 | None:intergenic | 40.0% |
| ! | CATGCAAAAGCATGTTTGGA+GGG | - | chr3.3:88898529-88898548 | None:intergenic | 40.0% |
| ! | CTGCAACATAAAGGTATAGG+TGG | - | chr3.3:88896436-88896455 | None:intergenic | 40.0% |
| ! | GAAGTTATGGGTCTTATGCA+AGG | + | chr3.3:88895817-88895836 | MS.gene85661:CDS | 40.0% |
| ! | GGTTCTAACTTCTATGCCAT+GGG | - | chr3.3:88899318-88899337 | None:intergenic | 40.0% |
| ! | TCATGCAAAAGCATGTTTGG+AGG | - | chr3.3:88898530-88898549 | None:intergenic | 40.0% |
| !! | TGCTGATTCCATCATCGTTA+TGG | + | chr3.3:88895849-88895868 | MS.gene85661:CDS | 40.0% |
| !! | TGGTTCTAACTTCTATGCCA+TGG | - | chr3.3:88899319-88899338 | None:intergenic | 40.0% |
| !! | TTCTCTTTTTGGTAGGAGGA+TGG | - | chr3.3:88899541-88899560 | None:intergenic | 40.0% |
| !!! | CTCTGCTTGTTCTAGCTTTT+CGG | - | chr3.3:88897371-88897390 | None:intergenic | 40.0% |
| !!! | TTATGTTGCAGCCGTTTTTG+CGG | + | chr3.3:88896445-88896464 | MS.gene85661:intron | 40.0% |
| AATTCCAACGCGATAAGCCA+TGG | + | chr3.3:88895704-88895723 | MS.gene85661:CDS | 45.0% | |
| AGGAAATATGAGCCCACAGT+TGG | - | chr3.3:88897750-88897769 | None:intergenic | 45.0% | |
| ATTCCAACGCGATAAGCCAT+GGG | + | chr3.3:88895705-88895724 | MS.gene85661:CDS | 45.0% | |
| CAGCAGGCTTATAACCTTCA+GGG | - | chr3.3:88896907-88896926 | None:intergenic | 45.0% | |
| CAGCGATAGCACAACAAACA+TGG | + | chr3.3:88895602-88895621 | MS.gene85661:CDS | 45.0% | |
| CCAGCAGAAACAGTTCTTGT+CGG | - | chr3.3:88896854-88896873 | None:intergenic | 45.0% | |
| CGAGTTTCAGTACCTTCAAC+AGG | - | chr3.3:88895889-88895908 | None:intergenic | 45.0% | |
| CGTCTGAAGGAGTTTCCATT+GGG | - | chr3.3:88895648-88895667 | None:intergenic | 45.0% | |
| GATGAGCACTTGCCAAACAT+GGG | - | chr3.3:88898644-88898663 | None:intergenic | 45.0% | |
| GCTGGACAAATCTCGGATTT+AGG | + | chr3.3:88897217-88897236 | MS.gene85661:CDS | 45.0% | |
| GGATGGTATCATTCACATCC+TGG | + | chr3.3:88896740-88896759 | MS.gene85661:CDS | 45.0% | |
| GGCTCATATTTCCTAGCTCA+CGG | + | chr3.3:88897756-88897775 | MS.gene85661:intron | 45.0% | |
| TCACGAGTGATCTTAGCAAG+TGG | - | chr3.3:88899459-88899478 | None:intergenic | 45.0% | |
| TCAGCAGGCTTATAACCTTC+AGG | - | chr3.3:88896908-88896927 | None:intergenic | 45.0% | |
| TCGTCTGAAGGAGTTTCCAT+TGG | - | chr3.3:88895649-88895668 | None:intergenic | 45.0% | |
| TGGCTTATCGCGTTGGAATT+CGG | - | chr3.3:88895704-88895723 | None:intergenic | 45.0% | |
| TGGGATGAAATAGAGGGAGA+GGG | + | chr3.3:88897884-88897903 | MS.gene85661:intron | 45.0% | |
| TTGACACGCTTGAAGTAGTG+AGG | - | chr3.3:88895739-88895758 | None:intergenic | 45.0% | |
| TTGGGATGAAATAGAGGGAG+AGG | + | chr3.3:88897883-88897902 | MS.gene85661:intron | 45.0% | |
| ! | AACTTGGCTCTTGGGACATT+AGG | + | chr3.3:88897978-88897997 | MS.gene85661:intron | 45.0% |
| ! | CACACCTTTTGGATCTTCTG+TGG | + | chr3.3:88897134-88897153 | MS.gene85661:CDS | 45.0% |
| ! | CGGCTGCAACATAAAGGTAT+AGG | - | chr3.3:88896439-88896458 | None:intergenic | 45.0% |
| ! | CGGTGAATTTTGTTGGATGC+AGG | + | chr3.3:88899599-88899618 | MS.gene85661:intron | 45.0% |
| ! | CTTCGAGAGTGTGAAAGAGA+AGG | + | chr3.3:88898156-88898175 | MS.gene85661:intron | 45.0% |
| ! | GAGAGAATGTGTGATGGTGA+GGG | - | chr3.3:88899104-88899123 | None:intergenic | 45.0% |
| ! | TCTGTAGGAACTTGGCTCTT+GGG | + | chr3.3:88897970-88897989 | MS.gene85661:intron | 45.0% |
| ! | TGAGAGAATGTGTGATGGTG+AGG | - | chr3.3:88899105-88899124 | None:intergenic | 45.0% |
| ! | TTTTGGTAGGAGGATGGTGT+TGG | - | chr3.3:88899535-88899554 | None:intergenic | 45.0% |
| !! | AACTGTTTCTGCTGGGAAAG+TGG | + | chr3.3:88896859-88896878 | MS.gene85661:CDS | 45.0% |
| !! | CGACAAGAACTGTTTCTGCT+GGG | + | chr3.3:88896852-88896871 | MS.gene85661:CDS | 45.0% |
| !! | GCAATTTCAGGAGCCGTTTT+TGG | + | chr3.3:88896814-88896833 | MS.gene85661:CDS | 45.0% |
| !! | GTTATGGTTGCTGGCTTTCT+GGG | + | chr3.3:88896762-88896781 | MS.gene85661:CDS | 45.0% |
| !!! | ATTTCAGGAGCCGTTTTTGG+CGG | + | chr3.3:88896817-88896836 | MS.gene85661:CDS | 45.0% |
| AAATTTCCACGCCGTGAGCT+AGG | - | chr3.3:88897770-88897789 | None:intergenic | 50.0% | |
| AACAGCCTGTTTGTGTGCAC+TGG | + | chr3.3:88899159-88899178 | MS.gene85661:intron | 50.0% | |
| AATTGGCACACTCGCGTTTC+GGG | + | chr3.3:88897395-88897414 | MS.gene85661:CDS | 50.0% | |
| ACCTTCAGGGTAAGTCCTGA+AGG | - | chr3.3:88896894-88896913 | None:intergenic | 50.0% | |
| AGATTCATGAGTGCTCCGAC+TGG | + | chr3.3:88898374-88898393 | MS.gene85661:intron | 50.0% | |
| ATATTTCCTAGCTCACGGCG+TGG | + | chr3.3:88897761-88897780 | MS.gene85661:intron | 50.0% | |
| ATCTTCCACTACGACGAAGC+AGG | + | chr3.3:88895673-88895692 | MS.gene85661:CDS | 50.0% | |
| ATTTGTGTGTGTAGGCTGGG+AGG | + | chr3.3:88896702-88896721 | MS.gene85661:intron | 50.0% | |
| CAATTGGCACACTCGCGTTT+CGG | + | chr3.3:88897394-88897413 | MS.gene85661:CDS | 50.0% | |
| CACATCCTGGTTATGGTTGC+TGG | + | chr3.3:88896753-88896772 | MS.gene85661:CDS | 50.0% | |
| CTGCTGGGAAAGTGGAGATT+GGG | + | chr3.3:88896867-88896886 | MS.gene85661:CDS | 50.0% | |
| GAAAGCCAGCAACCATAACC+AGG | - | chr3.3:88896761-88896780 | None:intergenic | 50.0% | |
| GAAATAGAGGGAGAGGGAGA+GGG | + | chr3.3:88897890-88897909 | MS.gene85661:intron | 50.0% | |
| GGATGAGCACTTGCCAAACA+TGG | - | chr3.3:88898645-88898664 | None:intergenic | 50.0% | |
| GGCAATGGAGACTATGTAGC+TGG | + | chr3.3:88897199-88897218 | MS.gene85661:CDS | 50.0% | |
| TATGGCCAGTGCACACAAAC+AGG | - | chr3.3:88899167-88899186 | None:intergenic | 50.0% | |
| TCTGCTGGGAAAGTGGAGAT+TGG | + | chr3.3:88896866-88896885 | MS.gene85661:CDS | 50.0% | |
| TGAAATAGAGGGAGAGGGAG+AGG | + | chr3.3:88897889-88897908 | MS.gene85661:intron | 50.0% | |
| TGCACGGTGTATTGTCGTGT+CGG | + | chr3.3:88896358-88896377 | MS.gene85661:intron | 50.0% | |
| TGCACTCGCTCTTCTCAAGA+TGG | + | chr3.3:88895765-88895784 | MS.gene85661:CDS | 50.0% | |
| TGCTGGGAAAGTGGAGATTG+GGG | + | chr3.3:88896868-88896887 | MS.gene85661:CDS | 50.0% | |
| ! | AGGGTTTGAAATGGGGAGCA+AGG | - | chr3.3:88897014-88897033 | None:intergenic | 50.0% |
| ! | CTCTGTAGGAACTTGGCTCT+TGG | + | chr3.3:88897969-88897988 | MS.gene85661:intron | 50.0% |
| ! | GCTTTTGCGCTACCTGTTGA+AGG | + | chr3.3:88895874-88895893 | MS.gene85661:CDS | 50.0% |
| !! | CCGACAAGAACTGTTTCTGC+TGG | + | chr3.3:88896851-88896870 | MS.gene85661:CDS | 50.0% |
| !! | GAAGAGGGTAAGTGCTGATG+TGG | + | chr3.3:88897811-88897830 | MS.gene85661:intron | 50.0% |
| !! | GGTTATGGTTGCTGGCTTTC+TGG | + | chr3.3:88896761-88896780 | MS.gene85661:CDS | 50.0% |
| !!! | GGAGAGGGAGAGGTATCTTT+TGG | + | chr3.3:88897905-88897924 | MS.gene85661:intron | 50.0% |
| AAGTGGAGATTGGGGCCTTC+AGG | + | chr3.3:88896876-88896895 | MS.gene85661:CDS | 55.0% | |
| ATGGTTGTTCACGCGCGTTC+TGG | + | chr3.3:88895784-88895803 | MS.gene85661:CDS | 55.0% | |
| CTTGTCCTGCTTCGTCGTAG+TGG | - | chr3.3:88895681-88895700 | None:intergenic | 55.0% | |
| GCCTTCAGGACTTACCCTGA+AGG | + | chr3.3:88896890-88896909 | MS.gene85661:CDS | 55.0% | |
| GGGAGGTTGGAGAATGTCGT+GGG | + | chr3.3:88896719-88896738 | MS.gene85661:CDS | 55.0% | |
| GGTTGGAGAATGTCGTGGGA+TGG | + | chr3.3:88896723-88896742 | MS.gene85661:CDS | 55.0% | |
| TACACCGTGCACACTGCACA+CGG | - | chr3.3:88896349-88896368 | None:intergenic | 55.0% | |
| TAGTGAGGATCGTTCGCCCA+TGG | - | chr3.3:88895724-88895743 | None:intergenic | 55.0% | |
| TGGGAGGTTGGAGAATGTCG+TGG | + | chr3.3:88896718-88896737 | MS.gene85661:CDS | 55.0% | |
| ! | CTAGGTGTAGGTGCTACCAG+TGG | - | chr3.3:88897421-88897440 | None:intergenic | 55.0% |
| !! | AGGGTAAGTGCTGATGTGGC+AGG | + | chr3.3:88897815-88897834 | MS.gene85661:intron | 55.0% |
| !! | GGGTAAGTGCTGATGTGGCA+GGG | + | chr3.3:88897816-88897835 | MS.gene85661:intron | 55.0% |
| ATGTGGCAGGGAGTGAGGGA+AGG | + | chr3.3:88897828-88897847 | MS.gene85661:intron | 60.0% | |
| CCTACCGTGTGCAGTGTGCA+CGG | + | chr3.3:88896342-88896361 | MS.gene85661:intron | 60.0% | |
| CGTGCACACTGCACACGGTA+GGG | - | chr3.3:88896344-88896363 | None:intergenic | 60.0% | |
| GCTGATGTGGCAGGGAGTGA+GGG | + | chr3.3:88897824-88897843 | MS.gene85661:intron | 60.0% | |
| GTGTGTGTAGGCTGGGAGGT+TGG | + | chr3.3:88896706-88896725 | MS.gene85661:intron | 60.0% | |
| GTTGTTCACGCGCGTTCTGG+TGG | + | chr3.3:88895787-88895806 | MS.gene85661:CDS | 60.0% | |
| TCGCCCATGGCTTATCGCGT+TGG | - | chr3.3:88895711-88895730 | None:intergenic | 60.0% | |
| TCGGAGCAATCTTCGGCCCA+TGG | + | chr3.3:88899299-88899318 | MS.gene85661:intron | 60.0% | |
| TGCTGATGTGGCAGGGAGTG+AGG | + | chr3.3:88897823-88897842 | MS.gene85661:intron | 60.0% | |
| TGTGGCAGGGAGTGAGGGAA+GGG | + | chr3.3:88897829-88897848 | MS.gene85661:intron | 60.0% | |
| ACACTCGCGTTTCGGGCCAC+TGG | + | chr3.3:88897402-88897421 | MS.gene85661:CDS | 65.0% | |
| AGAGGGAGAGGGAGAGGGAG+AGG | + | chr3.3:88897895-88897914 | MS.gene85661:intron | 65.0% | |
| CCGTGCACACTGCACACGGT+AGG | - | chr3.3:88896345-88896364 | None:intergenic | 65.0% | |
| GTGGCAGGGAGTGAGGGAAG+GGG | + | chr3.3:88897830-88897849 | MS.gene85661:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 88895577 | 88899710 | 88895577 | ID=MS.gene85661 |
| chr3.3 | mRNA | 88895577 | 88899710 | 88895577 | ID=MS.gene85661.t1;Parent=MS.gene85661 |
| chr3.3 | exon | 88895577 | 88895969 | 88895577 | ID=MS.gene85661.t1.exon1;Parent=MS.gene85661.t1 |
| chr3.3 | CDS | 88895577 | 88895969 | 88895577 | ID=cds.MS.gene85661.t1;Parent=MS.gene85661.t1 |
| chr3.3 | exon | 88896716 | 88896997 | 88896716 | ID=MS.gene85661.t1.exon2;Parent=MS.gene85661.t1 |
| chr3.3 | CDS | 88896716 | 88896997 | 88896716 | ID=cds.MS.gene85661.t1;Parent=MS.gene85661.t1 |
| chr3.3 | exon | 88897091 | 88897238 | 88897091 | ID=MS.gene85661.t1.exon3;Parent=MS.gene85661.t1 |
| chr3.3 | CDS | 88897091 | 88897238 | 88897091 | ID=cds.MS.gene85661.t1;Parent=MS.gene85661.t1 |
| chr3.3 | exon | 88897368 | 88897450 | 88897368 | ID=MS.gene85661.t1.exon4;Parent=MS.gene85661.t1 |
| chr3.3 | CDS | 88897368 | 88897450 | 88897368 | ID=cds.MS.gene85661.t1;Parent=MS.gene85661.t1 |
| chr3.3 | exon | 88899447 | 88899524 | 88899447 | ID=MS.gene85661.t1.exon5;Parent=MS.gene85661.t1 |
| chr3.3 | CDS | 88899447 | 88899524 | 88899447 | ID=cds.MS.gene85661.t1;Parent=MS.gene85661.t1 |
| chr3.3 | exon | 88899621 | 88899710 | 88899621 | ID=MS.gene85661.t1.exon6;Parent=MS.gene85661.t1 |
| chr3.3 | CDS | 88899621 | 88899710 | 88899621 | ID=cds.MS.gene85661.t1;Parent=MS.gene85661.t1 |
| Gene Sequence |
| Protein sequence |
