Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073315.t1 | XP_003610056.2 | 96.9 | 579 | 18 | 0 | 1 | 579 | 1 | 579 | 1.40E-281 | 978.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073315.t1 | Q9LVD8 | 68.9 | 524 | 132 | 10 | 1 | 500 | 1 | 517 | 3.6e-164 | 579.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073315.t1 | G7JUA8 | 96.9 | 579 | 18 | 0 | 1 | 579 | 1 | 579 | 1.0e-281 | 978.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049633 | MS.gene073315 | 0.803055 | 4.18E-49 | -1.69E-46 |
| MS.gene05080 | MS.gene073315 | 0.800846 | 1.19E-48 | -1.69E-46 |
| MS.gene052164 | MS.gene073315 | 0.817198 | 3.74E-52 | -1.69E-46 |
| MS.gene052872 | MS.gene073315 | 0.801587 | 8.39E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene073315 | 0.80778 | 4.28E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene073315 | 0.810346 | 1.21E-50 | -1.69E-46 |
| MS.gene055577 | MS.gene073315 | 0.822902 | 1.85E-53 | -1.69E-46 |
| MS.gene055748 | MS.gene073315 | 0.804472 | 2.13E-49 | -1.69E-46 |
| MS.gene055751 | MS.gene073315 | 0.803247 | 3.82E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene073315 | 0.804859 | 1.76E-49 | -1.69E-46 |
| MS.gene056283 | MS.gene073315 | 0.802324 | 5.92E-49 | -1.69E-46 |
| MS.gene056387 | MS.gene073315 | 0.811568 | 6.56E-51 | -1.69E-46 |
| MS.gene056692 | MS.gene073315 | 0.811648 | 6.30E-51 | -1.69E-46 |
| MS.gene059718 | MS.gene073315 | 0.803993 | 2.67E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene073315 | 0.838296 | 3.13E-57 | -1.69E-46 |
| MS.gene060982 | MS.gene073315 | 0.812166 | 4.86E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073315.t1 | MTR_4g127440 | 97.064 | 579 | 17 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1177 |
| MS.gene073315.t1 | MTR_2g037980 | 68.509 | 597 | 165 | 7 | 1 | 579 | 1 | 592 | 0.0 | 755 |
| MS.gene073315.t1 | MTR_4g115420 | 50.000 | 514 | 225 | 8 | 2 | 511 | 4 | 489 | 3.48e-158 | 464 |
| MS.gene073315.t1 | MTR_0530s0020 | 37.363 | 546 | 293 | 12 | 21 | 559 | 6 | 509 | 1.59e-98 | 310 |
| MS.gene073315.t1 | MTR_4g114960 | 30.314 | 574 | 330 | 16 | 6 | 528 | 5 | 559 | 4.98e-71 | 239 |
| MS.gene073315.t1 | MTR_8g008860 | 31.429 | 595 | 325 | 18 | 6 | 543 | 5 | 573 | 1.00e-66 | 228 |
| MS.gene073315.t1 | MTR_3g106900 | 30.484 | 620 | 309 | 14 | 3 | 527 | 2 | 594 | 1.24e-63 | 221 |
| MS.gene073315.t1 | MTR_2g008170 | 32.302 | 582 | 317 | 16 | 8 | 527 | 7 | 573 | 2.23e-62 | 216 |
| MS.gene073315.t1 | MTR_3g080490 | 32.372 | 312 | 194 | 5 | 8 | 312 | 6 | 307 | 2.34e-52 | 193 |
| MS.gene073315.t1 | MTR_8g106040 | 28.205 | 312 | 204 | 8 | 7 | 308 | 5 | 306 | 3.96e-31 | 126 |
| MS.gene073315.t1 | MTR_6g059380 | 24.105 | 419 | 262 | 14 | 8 | 399 | 10 | 399 | 6.91e-21 | 96.7 |
| MS.gene073315.t1 | MTR_1g033880 | 26.036 | 338 | 199 | 13 | 1 | 324 | 1 | 301 | 7.25e-19 | 89.4 |
| MS.gene073315.t1 | MTR_3g086670 | 32.258 | 155 | 98 | 4 | 8 | 159 | 6 | 156 | 9.45e-17 | 82.0 |
| MS.gene073315.t1 | MTR_8g089850 | 28.877 | 187 | 119 | 6 | 34 | 217 | 31 | 206 | 1.73e-15 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073315.t1 | AT5G57200 | 63.894 | 529 | 160 | 10 | 1 | 505 | 1 | 522 | 0.0 | 626 |
| MS.gene073315.t1 | AT4G25940 | 61.163 | 533 | 174 | 10 | 1 | 505 | 1 | 528 | 0.0 | 615 |
| MS.gene073315.t1 | AT2G01600 | 51.771 | 593 | 229 | 11 | 1 | 576 | 1 | 553 | 0.0 | 540 |
| MS.gene073315.t1 | AT1G14910 | 51.908 | 524 | 208 | 10 | 1 | 505 | 1 | 499 | 8.51e-179 | 521 |
| MS.gene073315.t1 | AT1G14910 | 50.954 | 524 | 208 | 11 | 1 | 505 | 1 | 494 | 5.69e-171 | 501 |
| MS.gene073315.t1 | AT5G35200 | 48.162 | 517 | 233 | 9 | 8 | 520 | 12 | 497 | 2.46e-152 | 449 |
| MS.gene073315.t1 | AT5G35200 | 48.162 | 517 | 233 | 9 | 8 | 520 | 12 | 497 | 2.46e-152 | 449 |
| MS.gene073315.t1 | AT1G03050 | 33.013 | 624 | 313 | 18 | 1 | 545 | 1 | 598 | 4.10e-82 | 269 |
| MS.gene073315.t1 | AT4G02650 | 30.272 | 588 | 326 | 16 | 8 | 528 | 7 | 577 | 7.78e-65 | 223 |
| MS.gene073315.t1 | AT4G32285 | 28.983 | 590 | 329 | 12 | 6 | 517 | 4 | 581 | 1.28e-64 | 223 |
| MS.gene073315.t1 | AT4G32285 | 28.983 | 590 | 329 | 12 | 6 | 517 | 4 | 581 | 1.28e-64 | 223 |
| MS.gene073315.t1 | AT1G05020 | 32.308 | 325 | 196 | 7 | 8 | 310 | 6 | 328 | 6.00e-50 | 183 |
| MS.gene073315.t1 | AT2G25430 | 43.182 | 176 | 87 | 5 | 8 | 179 | 6 | 172 | 2.33e-34 | 138 |
| MS.gene073315.t1 | AT2G25430 | 27.978 | 361 | 224 | 7 | 184 | 517 | 249 | 600 | 6.64e-27 | 115 |
| MS.gene073315.t1 | AT1G33340 | 26.861 | 309 | 201 | 9 | 7 | 306 | 9 | 301 | 4.80e-25 | 107 |
| MS.gene073315.t1 | AT4G40080 | 30.769 | 208 | 130 | 6 | 1 | 200 | 1 | 202 | 3.07e-20 | 93.2 |
| MS.gene073315.t1 | AT1G68110 | 27.778 | 324 | 181 | 11 | 5 | 308 | 2 | 292 | 1.64e-19 | 91.3 |
| MS.gene073315.t1 | AT1G25240 | 27.616 | 344 | 190 | 12 | 5 | 337 | 3 | 298 | 1.15e-16 | 82.4 |
| MS.gene073315.t1 | AT1G25240 | 27.616 | 344 | 190 | 12 | 5 | 337 | 2 | 297 | 1.31e-16 | 82.4 |
Find 123 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATATATGCAAAGCATTTA+TGG | 0.131077 | 8.4:+7083892 | None:intergenic |
| TCCTCTAGTTCTTGAGCTTT+TGG | 0.164263 | 8.4:+7082990 | None:intergenic |
| CATATCCATAACCTGCATTT+TGG | 0.171662 | 8.4:+7082226 | None:intergenic |
| GACCACAATCAATGTCTTTA+TGG | 0.184505 | 8.4:+7084897 | None:intergenic |
| CAAAATGCAGGTTATGGATA+TGG | 0.219437 | 8.4:-7082225 | MS.gene073315:CDS |
| AGGACTTACTATCCAATTTC+GGG | 0.252832 | 8.4:+7085260 | None:intergenic |
| AAGGACTTACTATCCAATTT+CGG | 0.269647 | 8.4:+7085259 | None:intergenic |
| CGTAGGCCTTTCTCCATGTT+TGG | 0.285097 | 8.4:+7085891 | None:intergenic |
| AATCCCATTTGTACGTTAGA+TGG | 0.309239 | 8.4:+7082126 | None:intergenic |
| CTTGCTTTGACTGATATAAC+TGG | 0.327035 | 8.4:-7082677 | MS.gene073315:CDS |
| CAAAGAACCTGTCTCAAAAC+TGG | 0.336881 | 8.4:+7083689 | None:intergenic |
| GCTTGTTCCTCAATTACTTC+AGG | 0.340855 | 8.4:+7083221 | None:intergenic |
| GGAACATCATTTGCTGTTGC+TGG | 0.351614 | 8.4:+7082079 | None:intergenic |
| CAACTCCAAAATGCAGGTTA+TGG | 0.355009 | 8.4:-7082231 | MS.gene073315:CDS |
| CTTCGAACGTGACGTTCCTT+AGG | 0.359965 | 8.4:+7085620 | None:intergenic |
| CCATCATTGTGTTGTGTTGT+TGG | 0.367456 | 8.4:+7082058 | None:intergenic |
| CCTGTACCTAGCTATTCTTA+TGG | 0.378000 | 8.4:-7081949 | MS.gene073315:CDS |
| TTGTTGAAAGCTGCTCCTTC+AGG | 0.378488 | 8.4:+7084243 | None:intergenic |
| TCGGGTCTTTAAAAGTCTCT+TGG | 0.403288 | 8.4:+7085278 | None:intergenic |
| CTTGGCTAGGCCAACCTTTG+TGG | 0.410064 | 8.4:+7085853 | None:intergenic |
| AAAATGCAGGTTATGGATAT+GGG | 0.415543 | 8.4:-7082224 | MS.gene073315:CDS |
| TGTTGAGGGTAATGAGTATA+TGG | 0.423576 | 8.4:+7082015 | None:intergenic |
| GCTTCCATCTAACGTACAAA+TGG | 0.433869 | 8.4:-7082130 | MS.gene073315:CDS |
| GCTTGAGTCATCTTTGAAGT+TGG | 0.438170 | 8.4:+7084792 | None:intergenic |
| TCCATTGTGGCAACAAAAGA+AGG | 0.438298 | 8.4:+7083588 | None:intergenic |
| TGAGCTGTTGGAGCAGTTAC+CGG | 0.447693 | 8.4:-7084420 | MS.gene073315:CDS |
| CACCCTCTCTCAATATCCTA+TGG | 0.449857 | 8.4:+7084875 | None:intergenic |
| GCTTGGCGGGTGTGGTTGCT+TGG | 0.456794 | 8.4:+7082620 | None:intergenic |
| ATATAAAAGAGCTGGCCAAC+AGG | 0.457370 | 8.4:-7083873 | MS.gene073315:intron |
| GAAATTGAAAATTTCTTGCA+AGG | 0.463221 | 8.4:+7083711 | None:intergenic |
| ACATTATATTGTAGCTCCCT+TGG | 0.463935 | 8.4:+7081914 | None:intergenic |
| AATGATGGAATCATAAAACT+TGG | 0.466717 | 8.4:-7084031 | MS.gene073315:CDS |
| GTAGCTCCCTTGGTGGGGCA+TGG | 0.468303 | 8.4:+7081924 | None:intergenic |
| AGCTTGGGATTGTTCTGCAT+GGG | 0.472936 | 8.4:-7084681 | MS.gene073315:CDS |
| TTATATTGTAGCTCCCTTGG+TGG | 0.482489 | 8.4:+7081917 | None:intergenic |
| AATCATAAAACTTGGGGATG+TGG | 0.485534 | 8.4:-7084023 | MS.gene073315:intron |
| GGAGGAAGAACCTGTTGAAA+AGG | 0.487082 | 8.4:-7083186 | MS.gene073315:CDS |
| TATGGCTGCTGCTGCTGGTA+AGG | 0.487312 | 8.4:+7082033 | None:intergenic |
| ATATATAGTTCCCTCAATGA+TGG | 0.487443 | 8.4:-7084046 | MS.gene073315:CDS |
| GAGTATATGGCTGCTGCTGC+TGG | 0.488868 | 8.4:+7082028 | None:intergenic |
| TACCAAGCTCTTAACACTGC+CGG | 0.491863 | 8.4:+7083536 | None:intergenic |
| ACGTTATTCGATACTGCAAA+TGG | 0.496974 | 8.4:+7082156 | None:intergenic |
| CAGCTTGGGATTGTTCTGCA+TGG | 0.497130 | 8.4:-7084682 | MS.gene073315:CDS |
| AACAAGTGCAAGTTCCCAAC+CGG | 0.499520 | 8.4:+7082649 | None:intergenic |
| AAAGATGACTCAAGCCCTCT+AGG | 0.500214 | 8.4:-7084784 | MS.gene073315:intron |
| CTTAAAGATTCCACAAAGGT+TGG | 0.501161 | 8.4:-7085863 | MS.gene073315:CDS |
| AATACAGTATGCATTGGCCT+TGG | 0.502727 | 8.4:-7084214 | MS.gene073315:intron |
| TATATTGTAGCTCCCTTGGT+GGG | 0.503564 | 8.4:+7081918 | None:intergenic |
| ACAGGTAAAGGATCTGCAAA+TGG | 0.505096 | 8.4:+7081967 | None:intergenic |
| TAAACTACTCACACAGAGTA+CGG | 0.506289 | 8.4:-7084828 | MS.gene073315:CDS |
| GATCTGACGCTTGGCGGGTG+TGG | 0.507629 | 8.4:+7082612 | None:intergenic |
| ATGATGGAATCATAAAACTT+GGG | 0.507727 | 8.4:-7084030 | MS.gene073315:CDS |
| ATCCGGCAGTGTTAAGAGCT+TGG | 0.509275 | 8.4:-7083538 | MS.gene073315:intron |
| CTTGTATTCGCTATTGACCT+TGG | 0.509420 | 8.4:+7085835 | None:intergenic |
| AACCAATTAATTTACCTAGA+GGG | 0.510144 | 8.4:+7084770 | None:intergenic |
| ACTAGAGGATAGCAATGCTT+TGG | 0.510779 | 8.4:-7082976 | MS.gene073315:CDS |
| CTTTAAAAGTCTCTTGGAAA+GGG | 0.510839 | 8.4:+7085284 | None:intergenic |
| TAAAGAGCCTGAAGTAATTG+AGG | 0.518081 | 8.4:-7083228 | MS.gene073315:CDS |
| CCATAAGAATAGCTAGGTAC+AGG | 0.520449 | 8.4:+7081949 | None:intergenic |
| TTCAACAAAATTATCATCGC+CGG | 0.521419 | 8.4:-7084582 | MS.gene073315:CDS |
| CGAACGTGACGTTCCTTAGG+TGG | 0.523533 | 8.4:+7085623 | None:intergenic |
| CTTCCATCTAACGTACAAAT+GGG | 0.525118 | 8.4:-7082129 | MS.gene073315:CDS |
| GCGGGTGTGGTTGCTTGGCG+TGG | 0.527690 | 8.4:+7082625 | None:intergenic |
| GAATAGCTAGGTACAGGTAA+AGG | 0.532228 | 8.4:+7081955 | None:intergenic |
| CAATTTCAACTCCAAAATGC+AGG | 0.534331 | 8.4:-7082237 | MS.gene073315:CDS |
| ATTCGCTATTGACCTTGGCT+AGG | 0.534898 | 8.4:+7085840 | None:intergenic |
| TAAAGAAGTTGCTGCAGCGC+CGG | 0.535135 | 8.4:+7084401 | None:intergenic |
| CAAGGTCAATAGCGAATACA+AGG | 0.535569 | 8.4:-7085834 | MS.gene073315:intron |
| CCTCCTTTGATATTGACTGA+TGG | 0.535897 | 8.4:-7083140 | MS.gene073315:CDS |
| AAAGAATTAGCACCTACATC+CGG | 0.539766 | 8.4:-7083555 | MS.gene073315:CDS |
| CTCTTAACACTGCCGGATGT+AGG | 0.539870 | 8.4:+7083543 | None:intergenic |
| AACGTTCCAAACATGGAGAA+AGG | 0.540341 | 8.4:-7085897 | MS.gene073315:CDS |
| AAGATACATCTGTCCTTGGT+TGG | 0.540758 | 8.4:+7085319 | None:intergenic |
| AGACATTGATTGTGGTCCAT+AGG | 0.541032 | 8.4:-7084891 | MS.gene073315:CDS |
| GAATGGGAACGTTCCAAACA+TGG | 0.543086 | 8.4:-7085904 | MS.gene073315:CDS |
| CAGTAAGATACATCTGTCCT+TGG | 0.544316 | 8.4:+7085315 | None:intergenic |
| TCTTTAAAAGTCTCTTGGAA+AGG | 0.544834 | 8.4:+7085283 | None:intergenic |
| ATATTGTAGCTCCCTTGGTG+GGG | 0.545509 | 8.4:+7081919 | None:intergenic |
| GGAACAAGCTGAAGAAATCA+AGG | 0.545522 | 8.4:-7083207 | MS.gene073315:CDS |
| CGCATAACTGACATCTGTTG+AGG | 0.547138 | 8.4:+7082000 | None:intergenic |
| TATAACTGGAACTACCGGTT+GGG | 0.551154 | 8.4:-7082663 | MS.gene073315:CDS |
| ACTGATATAACTGGAACTAC+CGG | 0.551332 | 8.4:-7082668 | MS.gene073315:CDS |
| TTGCATATATATAAAAGAGC+TGG | 0.556713 | 8.4:-7083881 | MS.gene073315:CDS |
| GATTTCTATGAATACTGCAA+GGG | 0.562059 | 8.4:-7083740 | MS.gene073315:CDS |
| CCAACAACACAACACAATGA+TGG | 0.562567 | 8.4:-7082058 | MS.gene073315:CDS |
| ATATAACTGGAACTACCGGT+TGG | 0.562685 | 8.4:-7082664 | MS.gene073315:CDS |
| TTATCTAATACAGTATGCAT+TGG | 0.563712 | 8.4:-7084220 | MS.gene073315:CDS |
| GTACACACTTTAGTTGAAGC+CGG | 0.565892 | 8.4:+7084563 | None:intergenic |
| TTTAATGTATTCTTCCATTG+TGG | 0.566798 | 8.4:+7083575 | None:intergenic |
| GTTGACTAGTGATGAGCTGT+TGG | 0.572215 | 8.4:-7084432 | MS.gene073315:CDS |
| TAACCATCAGTCAATATCAA+AGG | 0.572753 | 8.4:+7083137 | None:intergenic |
| TGATTTCTATGAATACTGCA+AGG | 0.574437 | 8.4:-7083741 | MS.gene073315:CDS |
| TTTAATATATTGCAGCCTGA+AGG | 0.575503 | 8.4:-7084258 | MS.gene073315:intron |
| GCATAACTGACATCTGTTGA+GGG | 0.576695 | 8.4:+7082001 | None:intergenic |
| CTTATGTTGAGTCAGGCTGG+TGG | 0.578694 | 8.4:-7082312 | MS.gene073315:intron |
| TGATGGAATCATAAAACTTG+GGG | 0.581076 | 8.4:-7084029 | MS.gene073315:CDS |
| TCCAAAAGCTCAAGAACTAG+AGG | 0.581217 | 8.4:-7082991 | MS.gene073315:CDS |
| TGCCATAAAGACATTGATTG+TGG | 0.582804 | 8.4:-7084899 | MS.gene073315:CDS |
| AAATGCAGGTTATGGATATG+GGG | 0.588854 | 8.4:-7082223 | MS.gene073315:CDS |
| TATGGCTCCATGCCCCACCA+AGG | 0.592209 | 8.4:-7081931 | MS.gene073315:CDS |
| TCACGTAGAATATCCACCTA+AGG | 0.594813 | 8.4:-7085636 | MS.gene073315:CDS |
| CACAAAGGTTGGCCTAGCCA+AGG | 0.595430 | 8.4:-7085852 | MS.gene073315:CDS |
| GCACTTGCAATCATACCACC+TGG | 0.601842 | 8.4:-7082954 | MS.gene073315:CDS |
| TGCTGATTATAACTATTGAA+CGG | 0.604102 | 8.4:+7082183 | None:intergenic |
| GGAATCTTTAAGAGCTCCGT+AGG | 0.604329 | 8.4:+7085874 | None:intergenic |
| ATGGAGCCATAAGAATAGCT+AGG | 0.606959 | 8.4:+7081943 | None:intergenic |
| ATGGCTCCATGCCCCACCAA+GGG | 0.615353 | 8.4:-7081930 | MS.gene073315:CDS |
| CCATCAGTCAATATCAAAGG+AGG | 0.615938 | 8.4:+7083140 | None:intergenic |
| TGTATGAAGATGAAAATGCA+AGG | 0.616696 | 8.4:-7082263 | MS.gene073315:CDS |
| GTCCATAGGATATTGAGAGA+GGG | 0.628415 | 8.4:-7084877 | MS.gene073315:CDS |
| CTACATCAGCTCACCAACCA+AGG | 0.628734 | 8.4:-7085332 | MS.gene073315:CDS |
| TGAAAAGGAACAAACAGAGA+AGG | 0.638172 | 8.4:-7083171 | MS.gene073315:CDS |
| GGTCCATAGGATATTGAGAG+AGG | 0.643905 | 8.4:-7084878 | MS.gene073315:CDS |
| CCAAGCGTCAGATCAAAACA+TGG | 0.646274 | 8.4:-7082603 | MS.gene073315:intron |
| AATGCAGGTTATGGATATGG+GGG | 0.651296 | 8.4:-7082222 | MS.gene073315:CDS |
| CAAACATGGAGAAAGGCCTA+CGG | 0.670628 | 8.4:-7085890 | MS.gene073315:CDS |
| GTGGCAACAAAAGAAGGTGG+TGG | 0.682709 | 8.4:+7083594 | None:intergenic |
| ATTGTGGCAACAAAAGAAGG+TGG | 0.687309 | 8.4:+7083591 | None:intergenic |
| ATCTAGGCCTTACCACCAGG+TGG | 0.699605 | 8.4:+7082939 | None:intergenic |
| ATACTTGACAGCAAACAAGT+CGG | 0.715673 | 8.4:+7084378 | None:intergenic |
| ACAAGCTGAAGAAATCAAGG+AGG | 0.720996 | 8.4:-7083204 | MS.gene073315:CDS |
| AGCTCTTAAAGATTCCACAA+AGG | 0.721390 | 8.4:-7085867 | MS.gene073315:CDS |
| CTTGCAATCATACCACCTGG+TGG | 0.732489 | 8.4:-7082951 | MS.gene073315:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAAATGTGAATATT+GGG | + | chr8.4:7082072-7082091 | None:intergenic | 10.0% |
| !! | AGAAATAATTAACACAATAT+TGG | + | chr8.4:7082429-7082448 | None:intergenic | 15.0% |
| !! | AGCATAAATATAATTCAATT+TGG | + | chr8.4:7084005-7084024 | None:intergenic | 15.0% |
| !! | ATAAGTTTAATATTCCAATT+TGG | + | chr8.4:7082398-7082417 | None:intergenic | 15.0% |
| !! | ATATTTGAAAAATTTCTTGA+TGG | - | chr8.4:7082282-7082301 | MS.gene073315:CDS | 15.0% |
| !! | GAAAATAAAAATGTGAATAT+TGG | + | chr8.4:7082073-7082092 | None:intergenic | 15.0% |
| !! | TTATAAGAAAAAGTTAGATT+TGG | - | chr8.4:7083465-7083484 | MS.gene073315:intron | 15.0% |
| !!! | TCAAGAAATTTTTCAAATAT+TGG | + | chr8.4:7082282-7082301 | None:intergenic | 15.0% |
| !!! | TTTTTTCATTTTGTTATCAT+AGG | - | chr8.4:7082124-7082143 | MS.gene073315:CDS | 15.0% |
| !! | AAAACTAAATATTCATACCA+AGG | + | chr8.4:7083620-7083639 | None:intergenic | 20.0% |
| !! | AAGTAAGAAAATCTTAGAAT+TGG | + | chr8.4:7085093-7085112 | None:intergenic | 20.0% |
| !! | AATCAACTATCATATAATCT+AGG | + | chr8.4:7084894-7084913 | None:intergenic | 20.0% |
| !! | AATTACAAAATATGCTTGTT+TGG | - | chr8.4:7085019-7085038 | MS.gene073315:intron | 20.0% |
| !! | ACTTTGGTTATAAACTTATA+TGG | - | chr8.4:7084717-7084736 | MS.gene073315:intron | 20.0% |
| !! | AGAAATGAAAACAATACAAT+AGG | - | chr8.4:7082371-7082390 | MS.gene073315:intron | 20.0% |
| !! | ATGTACATGTATGTTAATAA+AGG | - | chr8.4:7084497-7084516 | MS.gene073315:intron | 20.0% |
| !! | ATTTCAAACATATACTAGTT+TGG | - | chr8.4:7082697-7082716 | MS.gene073315:CDS | 20.0% |
| !! | GAAATGAAAACAATACAATA+GGG | - | chr8.4:7082372-7082391 | MS.gene073315:intron | 20.0% |
| !! | GGAAAATTAACAAACATAAT+AGG | + | chr8.4:7082324-7082343 | None:intergenic | 20.0% |
| !! | GTTATAAACTTATATGGTAA+TGG | - | chr8.4:7084723-7084742 | MS.gene073315:intron | 20.0% |
| !! | TAACTGAATAATGAAATTAC+AGG | - | chr8.4:7082891-7082910 | MS.gene073315:intron | 20.0% |
| !! | TATTAACATACATGTACATT+GGG | + | chr8.4:7084496-7084515 | None:intergenic | 20.0% |
| !! | TGTTAGAAAATATAATATGC+TGG | - | chr8.4:7084770-7084789 | MS.gene073315:intron | 20.0% |
| !! | TTATTAACATACATGTACAT+TGG | + | chr8.4:7084497-7084516 | None:intergenic | 20.0% |
| !! | TTCATTTGAATGAATAAAGA+AGG | + | chr8.4:7082095-7082114 | None:intergenic | 20.0% |
| !!! | AAATTTTGTCAAAATTACAG+TGG | + | chr8.4:7082639-7082658 | None:intergenic | 20.0% |
| !!! | AAGATTTTCTTACTTTATGT+AGG | - | chr8.4:7085098-7085117 | MS.gene073315:intron | 20.0% |
| !!! | AGGTAAATTAATTGGTTTTA+TGG | - | chr8.4:7083050-7083069 | MS.gene073315:intron | 20.0% |
| !!! | ATATATATGCAAAGCATTTA+TGG | + | chr8.4:7083925-7083944 | None:intergenic | 20.0% |
| !!! | TAACAATACTTTTTCTTGTA+TGG | - | chr8.4:7083711-7083730 | MS.gene073315:CDS | 20.0% |
| ! | AAAAATGCAGTTCTTTGATA+TGG | - | chr8.4:7083887-7083906 | MS.gene073315:CDS | 25.0% |
| ! | AAACCAATTAATTTACCTAG+AGG | + | chr8.4:7083048-7083067 | None:intergenic | 25.0% |
| ! | AACCAATTAATTTACCTAGA+GGG | + | chr8.4:7083047-7083066 | None:intergenic | 25.0% |
| ! | AACCTACATTAAGTATGAAA+AGG | + | chr8.4:7082577-7082596 | None:intergenic | 25.0% |
| ! | AAGCATGGTTAAATAAATGA+TGG | + | chr8.4:7085049-7085068 | None:intergenic | 25.0% |
| ! | ATTAACATACATGTACATTG+GGG | + | chr8.4:7084495-7084514 | None:intergenic | 25.0% |
| ! | GAAATTGAAAATTTCTTGCA+AGG | + | chr8.4:7084106-7084125 | None:intergenic | 25.0% |
| ! | TGGAAAGATGAAATTGAAAT+AGG | + | chr8.4:7082262-7082281 | None:intergenic | 25.0% |
| ! | TTATCTAATACAGTATGCAT+TGG | - | chr8.4:7083594-7083613 | MS.gene073315:CDS | 25.0% |
| ! | TTGCATATATATAAAAGAGC+TGG | - | chr8.4:7083933-7083952 | MS.gene073315:intron | 25.0% |
| ! | TTTAATGTATTCTTCCATTG+TGG | + | chr8.4:7084242-7084261 | None:intergenic | 25.0% |
| ! | TTTGTAATTATTTGAGCATC+CGG | + | chr8.4:7085008-7085027 | None:intergenic | 25.0% |
| !! | AAATTCATTATCTAGTCTTC+CGG | - | chr8.4:7084986-7085005 | MS.gene073315:intron | 25.0% |
| !! | AATGATGGAATCATAAAACT+TGG | - | chr8.4:7083783-7083802 | MS.gene073315:intron | 25.0% |
| !! | ATAGAATATTTCTGCAAAGA+AGG | + | chr8.4:7082461-7082480 | None:intergenic | 25.0% |
| !! | ATGATGGAATCATAAAACTT+GGG | - | chr8.4:7083784-7083803 | MS.gene073315:intron | 25.0% |
| !! | CTAGTATATGTTTGAAATCA+CGG | + | chr8.4:7082695-7082714 | None:intergenic | 25.0% |
| !! | TAGAATATTTCTGCAAAGAA+GGG | + | chr8.4:7082460-7082479 | None:intergenic | 25.0% |
| !! | TGCTGATTATAACTATTGAA+CGG | + | chr8.4:7085634-7085653 | None:intergenic | 25.0% |
| !! | TTCTTCTAAAAATTGTGCAT+AGG | + | chr8.4:7083165-7083184 | None:intergenic | 25.0% |
| !! | TTGGGCTAGAAAATAAAAAT+TGG | + | chr8.4:7082054-7082073 | None:intergenic | 25.0% |
| !! | TTTTATGATTCCATCATTGA+GGG | + | chr8.4:7083781-7083800 | None:intergenic | 25.0% |
| !! | TTTTCGTATTAAGTTCAATG+AGG | - | chr8.4:7085422-7085441 | MS.gene073315:intron | 25.0% |
| !!! | ATTATTTTTGCTATGTATGC+AGG | - | chr8.4:7084037-7084056 | MS.gene073315:CDS | 25.0% |
| !!! | CATTTTGTTATCATAGGAAT+TGG | - | chr8.4:7082130-7082149 | MS.gene073315:CDS | 25.0% |
| !!! | TAAAGGTCATTTTTAACATC+AGG | - | chr8.4:7084514-7084533 | MS.gene073315:intron | 25.0% |
| !!! | TCTTTAGTTTCTTTTTCTTC+TGG | + | chr8.4:7084572-7084591 | None:intergenic | 25.0% |
| AAAATGCAGGTTATGGATAT+GGG | - | chr8.4:7085590-7085609 | MS.gene073315:intron | 30.0% | |
| AAAATTTCTTGATGGAGCAT+TGG | - | chr8.4:7082290-7082309 | MS.gene073315:CDS | 30.0% | |
| AAACATCATTATGAACCTGT+TGG | + | chr8.4:7083959-7083978 | None:intergenic | 30.0% | |
| AAGGACTTACTATCCAATTT+CGG | + | chr8.4:7082558-7082577 | None:intergenic | 30.0% | |
| AATTGTAATCTCAATCACAC+AGG | + | chr8.4:7084946-7084965 | None:intergenic | 30.0% | |
| ATAGCGTGTGATTAAAATTG+AGG | + | chr8.4:7083282-7083301 | None:intergenic | 30.0% | |
| ATATATAGTTCCCTCAATGA+TGG | - | chr8.4:7083768-7083787 | MS.gene073315:intron | 30.0% | |
| ATATATTACACGAAGAATGC+AGG | + | chr8.4:7082843-7082862 | None:intergenic | 30.0% | |
| ATTGTAATCTCAATCACACA+GGG | + | chr8.4:7084945-7084964 | None:intergenic | 30.0% | |
| GATTTCTATGAATACTGCAA+GGG | - | chr8.4:7084074-7084093 | MS.gene073315:intron | 30.0% | |
| GCTTTCATGTTTGTGAAATT+TGG | - | chr8.4:7084745-7084764 | MS.gene073315:intron | 30.0% | |
| TAACCATCAGTCAATATCAA+AGG | + | chr8.4:7084680-7084699 | None:intergenic | 30.0% | |
| TAGCGTGTGATTAAAATTGA+GGG | + | chr8.4:7083281-7083300 | None:intergenic | 30.0% | |
| TATCGAACAACAAAAAAGCA+TGG | + | chr8.4:7085064-7085083 | None:intergenic | 30.0% | |
| TGATGGAATCATAAAACTTG+GGG | - | chr8.4:7083785-7083804 | MS.gene073315:intron | 30.0% | |
| TGATTTCTATGAATACTGCA+AGG | - | chr8.4:7084073-7084092 | MS.gene073315:intron | 30.0% | |
| TGTATGAAGATGAAAATGCA+AGG | - | chr8.4:7085551-7085570 | MS.gene073315:intron | 30.0% | |
| TTCAACAAAATTATCATCGC+CGG | - | chr8.4:7083232-7083251 | MS.gene073315:CDS | 30.0% | |
| TTCTCATCTTACAGGTTTAA+AGG | + | chr8.4:7085459-7085478 | None:intergenic | 30.0% | |
| TTTAATATATTGCAGCCTGA+AGG | - | chr8.4:7083556-7083575 | MS.gene073315:CDS | 30.0% | |
| TTTCTAATTTCTTCTAACGC+AGG | + | chr8.4:7082356-7082375 | None:intergenic | 30.0% | |
| ! | CTTTAAAAGTCTCTTGGAAA+GGG | + | chr8.4:7082533-7082552 | None:intergenic | 30.0% |
| ! | GTCCTTTTCATACTTAATGT+AGG | - | chr8.4:7082572-7082591 | MS.gene073315:intron | 30.0% |
| ! | GTTTTATGATTCCATCATTG+AGG | + | chr8.4:7083782-7083801 | None:intergenic | 30.0% |
| ! | TCTTTAAAAGTCTCTTGGAA+AGG | + | chr8.4:7082534-7082553 | None:intergenic | 30.0% |
| ! | TGATGGTTATGATGATTTTC+TGG | - | chr8.4:7084691-7084710 | MS.gene073315:intron | 30.0% |
| !! | AGAAGTATACGCTTTTATAG+CGG | - | chr8.4:7084915-7084934 | MS.gene073315:intron | 30.0% |
| !! | GATGATTTTCTGGTATACTT+TGG | - | chr8.4:7084701-7084720 | MS.gene073315:intron | 30.0% |
| !!! | TTTTCTTCTGGTTCTTCTTT+CGG | + | chr8.4:7084560-7084579 | None:intergenic | 30.0% |
| AAAGAATTAGCACCTACATC+CGG | - | chr8.4:7084259-7084278 | MS.gene073315:intron | 35.0% | |
| AAATGCAGGTTATGGATATG+GGG | - | chr8.4:7085591-7085610 | MS.gene073315:intron | 35.0% | |
| AATCATAAAACTTGGGGATG+TGG | - | chr8.4:7083791-7083810 | MS.gene073315:intron | 35.0% | |
| AATCCCATTTGTACGTTAGA+TGG | + | chr8.4:7085691-7085710 | None:intergenic | 35.0% | |
| AATTATGTCAAATTCACCGC+CGG | + | chr8.4:7082608-7082627 | None:intergenic | 35.0% | |
| ACAATACAATAGGGCCAAAT+TGG | - | chr8.4:7082381-7082400 | MS.gene073315:intron | 35.0% | |
| ACATTATATTGTAGCTCCCT+TGG | + | chr8.4:7085903-7085922 | None:intergenic | 35.0% | |
| ACGTTATTCGATACTGCAAA+TGG | + | chr8.4:7085661-7085680 | None:intergenic | 35.0% | |
| ACTGATATAACTGGAACTAC+CGG | - | chr8.4:7085146-7085165 | MS.gene073315:intron | 35.0% | |
| AGCCCTCTAGGTAAATTAAT+TGG | - | chr8.4:7083042-7083061 | MS.gene073315:intron | 35.0% | |
| AGCTCTTAAAGATTCCACAA+AGG | - | chr8.4:7081947-7081966 | MS.gene073315:CDS | 35.0% | |
| AGGACTTACTATCCAATTTC+GGG | + | chr8.4:7082557-7082576 | None:intergenic | 35.0% | |
| ATACTTGACAGCAAACAAGT+CGG | + | chr8.4:7083439-7083458 | None:intergenic | 35.0% | |
| CAAAATGCAGGTTATGGATA+TGG | - | chr8.4:7085589-7085608 | MS.gene073315:intron | 35.0% | |
| CAATTTCAACTCCAAAATGC+AGG | - | chr8.4:7085577-7085596 | MS.gene073315:intron | 35.0% | |
| CATCAATGTTCTCATCTTAC+AGG | + | chr8.4:7085467-7085486 | None:intergenic | 35.0% | |
| CCAAACAGAACTCTTTATGT+TGG | + | chr8.4:7085289-7085308 | None:intergenic | 35.0% | |
| CCAACATAAAGAGTTCTGTT+TGG | - | chr8.4:7085286-7085305 | MS.gene073315:CDS | 35.0% | |
| CTTAAAGATTCCACAAAGGT+TGG | - | chr8.4:7081951-7081970 | MS.gene073315:CDS | 35.0% | |
| CTTCCATCTAACGTACAAAT+GGG | - | chr8.4:7085685-7085704 | MS.gene073315:intron | 35.0% | |
| CTTGCTTTGACTGATATAAC+TGG | - | chr8.4:7085137-7085156 | MS.gene073315:intron | 35.0% | |
| GACCACAATCAATGTCTTTA+TGG | + | chr8.4:7082920-7082939 | None:intergenic | 35.0% | |
| TAAACTACTCACACAGAGTA+CGG | - | chr8.4:7082986-7083005 | MS.gene073315:CDS | 35.0% | |
| TAAAGAGCCTGAAGTAATTG+AGG | - | chr8.4:7084586-7084605 | MS.gene073315:CDS | 35.0% | |
| TAATGTAGGTTTGTGTACAC+CGG | - | chr8.4:7082586-7082605 | MS.gene073315:intron | 35.0% | |
| TACCATTCAAAATTCAAGCG+AGG | + | chr8.4:7083857-7083876 | None:intergenic | 35.0% | |
| TGAAAAGGAACAAACAGAGA+AGG | - | chr8.4:7084643-7084662 | MS.gene073315:CDS | 35.0% | |
| TGTTGAGGGTAATGAGTATA+TGG | + | chr8.4:7085802-7085821 | None:intergenic | 35.0% | |
| TTGTAATCTCAATCACACAG+GGG | + | chr8.4:7084944-7084963 | None:intergenic | 35.0% | |
| ! | ATGTCAGAAAAGTGTAGGTA+AGG | - | chr8.4:7082806-7082825 | MS.gene073315:intron | 35.0% |
| ! | CATATCCATAACCTGCATTT+TGG | + | chr8.4:7085591-7085610 | None:intergenic | 35.0% |
| ! | TACCTACACTTTTCTGACAT+GGG | + | chr8.4:7082806-7082825 | None:intergenic | 35.0% |
| ! | TCTGTTTGTTCCTTTTCAAC+AGG | + | chr8.4:7084641-7084660 | None:intergenic | 35.0% |
| ! | TGCCATAAAGACATTGATTG+TGG | - | chr8.4:7082915-7082934 | MS.gene073315:intron | 35.0% |
| ! | TTACCTACACTTTTCTGACA+TGG | + | chr8.4:7082807-7082826 | None:intergenic | 35.0% |
| !! | GACTTTTAAAGACCCGAAAT+TGG | - | chr8.4:7082542-7082561 | MS.gene073315:intron | 35.0% |
| !!! | TCAATTTCCAGTTTTGAGAC+AGG | - | chr8.4:7084118-7084137 | MS.gene073315:intron | 35.0% |
| !!! | TTTTGAGACAGGTTCTTTGT+TGG | - | chr8.4:7084129-7084148 | MS.gene073315:intron | 35.0% |
| AACGTTCCAAACATGGAGAA+AGG | - | chr8.4:7081917-7081936 | MS.gene073315:CDS | 40.0% | |
| AAGATACATCTGTCCTTGGT+TGG | + | chr8.4:7082498-7082517 | None:intergenic | 40.0% | |
| AATGCAGGTTATGGATATGG+GGG | - | chr8.4:7085592-7085611 | MS.gene073315:intron | 40.0% | |
| ACAAGCTGAAGAAATCAAGG+AGG | - | chr8.4:7084610-7084629 | MS.gene073315:CDS | 40.0% | |
| ACAGGTAAAGGATCTGCAAA+TGG | + | chr8.4:7085850-7085869 | None:intergenic | 40.0% | |
| ACTAGAGGATAGCAATGCTT+TGG | - | chr8.4:7084838-7084857 | MS.gene073315:CDS | 40.0% | |
| ATATAAAAGAGCTGGCCAAC+AGG | - | chr8.4:7083941-7083960 | MS.gene073315:intron | 40.0% | |
| ATATAACTGGAACTACCGGT+TGG | - | chr8.4:7085150-7085169 | MS.gene073315:intron | 40.0% | |
| ATGGAGCCATAAGAATAGCT+AGG | + | chr8.4:7085874-7085893 | None:intergenic | 40.0% | |
| ATTGTGGCAACAAAAGAAGG+TGG | + | chr8.4:7084226-7084245 | None:intergenic | 40.0% | |
| ATTTCACTTAGACCCTGCAA+AGG | + | chr8.4:7084800-7084819 | None:intergenic | 40.0% | |
| CAAAGAACCTGTCTCAAAAC+TGG | + | chr8.4:7084128-7084147 | None:intergenic | 40.0% | |
| CAACTCCAAAATGCAGGTTA+TGG | - | chr8.4:7085583-7085602 | MS.gene073315:intron | 40.0% | |
| CAAGGTCAATAGCGAATACA+AGG | - | chr8.4:7081980-7081999 | MS.gene073315:CDS | 40.0% | |
| CAGTAAGATACATCTGTCCT+TGG | + | chr8.4:7082502-7082521 | None:intergenic | 40.0% | |
| CCAACAACACAACACAATGA+TGG | - | chr8.4:7085756-7085775 | MS.gene073315:intron | 40.0% | |
| CCATAAGAATAGCTAGGTAC+AGG | + | chr8.4:7085868-7085887 | None:intergenic | 40.0% | |
| CCATCAGTCAATATCAAAGG+AGG | + | chr8.4:7084677-7084696 | None:intergenic | 40.0% | |
| CCATCATTGTGTTGTGTTGT+TGG | + | chr8.4:7085759-7085778 | None:intergenic | 40.0% | |
| CCTGTACCTAGCTATTCTTA+TGG | - | chr8.4:7085865-7085884 | MS.gene073315:CDS | 40.0% | |
| CTGCATAGAGGAATCTGATT+AGG | + | chr8.4:7083115-7083134 | None:intergenic | 40.0% | |
| CTTCCTTCTTATGTTGAGTC+AGG | - | chr8.4:7085495-7085514 | MS.gene073315:intron | 40.0% | |
| CTTGTATTCGCTATTGACCT+TGG | + | chr8.4:7081982-7082001 | None:intergenic | 40.0% | |
| GAATAGCTAGGTACAGGTAA+AGG | + | chr8.4:7085862-7085881 | None:intergenic | 40.0% | |
| GCATAACTGACATCTGTTGA+GGG | + | chr8.4:7085816-7085835 | None:intergenic | 40.0% | |
| GCTTCCATCTAACGTACAAA+TGG | - | chr8.4:7085684-7085703 | MS.gene073315:intron | 40.0% | |
| GCTTGTTCCTCAATTACTTC+AGG | + | chr8.4:7084596-7084615 | None:intergenic | 40.0% | |
| GGAACAAGCTGAAGAAATCA+AGG | - | chr8.4:7084607-7084626 | MS.gene073315:CDS | 40.0% | |
| GTACACACTTTAGTTGAAGC+CGG | + | chr8.4:7083254-7083273 | None:intergenic | 40.0% | |
| GTCCATAGGATATTGAGAGA+GGG | - | chr8.4:7082937-7082956 | MS.gene073315:intron | 40.0% | |
| TATATTGTAGCTCCCTTGGT+GGG | + | chr8.4:7085899-7085918 | None:intergenic | 40.0% | |
| TCACGTAGAATATCCACCTA+AGG | - | chr8.4:7082178-7082197 | MS.gene073315:CDS | 40.0% | |
| TCCAAAAGCTCAAGAACTAG+AGG | - | chr8.4:7084823-7084842 | MS.gene073315:CDS | 40.0% | |
| TCCATTGTGGCAACAAAAGA+AGG | + | chr8.4:7084229-7084248 | None:intergenic | 40.0% | |
| TTATATTGTAGCTCCCTTGG+TGG | + | chr8.4:7085900-7085919 | None:intergenic | 40.0% | |
| ! | AATACAGTATGCATTGGCCT+TGG | - | chr8.4:7083600-7083619 | MS.gene073315:intron | 40.0% |
| ! | ACCTTCTTTTGTTGCCACAA+TGG | - | chr8.4:7084225-7084244 | MS.gene073315:CDS | 40.0% |
| ! | AGACATTGATTGTGGTCCAT+AGG | - | chr8.4:7082923-7082942 | MS.gene073315:intron | 40.0% |
| ! | CACCTCGCTTGAATTTTGAA+TGG | - | chr8.4:7083852-7083871 | MS.gene073315:intron | 40.0% |
| ! | CCTCCTTTGATATTGACTGA+TGG | - | chr8.4:7084674-7084693 | MS.gene073315:CDS | 40.0% |
| ! | TATAACTGGAACTACCGGTT+GGG | - | chr8.4:7085151-7085170 | MS.gene073315:intron | 40.0% |
| ! | TCGGGTCTTTAAAAGTCTCT+TGG | + | chr8.4:7082539-7082558 | None:intergenic | 40.0% |
| !! | GCTTGAGTCATCTTTGAAGT+TGG | + | chr8.4:7083025-7083044 | None:intergenic | 40.0% |
| !!! | TCCTCTAGTTCTTGAGCTTT+TGG | + | chr8.4:7084827-7084846 | None:intergenic | 40.0% |
| AAAGATGACTCAAGCCCTCT+AGG | - | chr8.4:7083030-7083049 | MS.gene073315:intron | 45.0% | |
| AACAAGTGCAAGTTCCCAAC+CGG | + | chr8.4:7085168-7085187 | None:intergenic | 45.0% | |
| AACAATCCCAAGCTGCATAG+AGG | + | chr8.4:7083127-7083146 | None:intergenic | 45.0% | |
| AATCATACCACCTGGTGGTA+AGG | - | chr8.4:7084868-7084887 | MS.gene073315:CDS | 45.0% | |
| AGCTTGGGATTGTTCTGCAT+GGG | - | chr8.4:7083133-7083152 | MS.gene073315:CDS | 45.0% | |
| AGGTTATGGATATGGGGGAA+CGG | - | chr8.4:7085597-7085616 | MS.gene073315:intron | 45.0% | |
| ATAATCTAGGCCTTACCACC+AGG | + | chr8.4:7084881-7084900 | None:intergenic | 45.0% | |
| ATATTGTAGCTCCCTTGGTG+GGG | + | chr8.4:7085898-7085917 | None:intergenic | 45.0% | |
| ATTCGCTATTGACCTTGGCT+AGG | + | chr8.4:7081977-7081996 | None:intergenic | 45.0% | |
| CAAACATGGAGAAAGGCCTA+CGG | - | chr8.4:7081924-7081943 | MS.gene073315:CDS | 45.0% | |
| CACCCTCTCTCAATATCCTA+TGG | + | chr8.4:7082942-7082961 | None:intergenic | 45.0% | |
| CAGATTCCTCTATGCAGCTT+GGG | - | chr8.4:7083118-7083137 | MS.gene073315:intron | 45.0% | |
| CAGCCTGACTCAACATAAGA+AGG | + | chr8.4:7085501-7085520 | None:intergenic | 45.0% | |
| CCAAGCGTCAGATCAAAACA+TGG | - | chr8.4:7085211-7085230 | MS.gene073315:intron | 45.0% | |
| CGCATAACTGACATCTGTTG+AGG | + | chr8.4:7085817-7085836 | None:intergenic | 45.0% | |
| CTTCTTATGTTGAGTCAGGC+TGG | - | chr8.4:7085499-7085518 | MS.gene073315:intron | 45.0% | |
| GGAGGAAGAACCTGTTGAAA+AGG | - | chr8.4:7084628-7084647 | MS.gene073315:CDS | 45.0% | |
| GGTCCATAGGATATTGAGAG+AGG | - | chr8.4:7082936-7082955 | MS.gene073315:intron | 45.0% | |
| GTTGACTAGTGATGAGCTGT+TGG | - | chr8.4:7083382-7083401 | MS.gene073315:intron | 45.0% | |
| TACCAAGCTCTTAACACTGC+CGG | + | chr8.4:7084281-7084300 | None:intergenic | 45.0% | |
| TCAGATTCCTCTATGCAGCT+TGG | - | chr8.4:7083117-7083136 | MS.gene073315:intron | 45.0% | |
| TTCTAACGCAGGCAATGTCA+TGG | + | chr8.4:7082345-7082364 | None:intergenic | 45.0% | |
| TTGTTGAAAGCTGCTCCTTC+AGG | + | chr8.4:7083574-7083593 | None:intergenic | 45.0% | |
| ! | AGGTGGTGGCTGTTTATTGT+AGG | + | chr8.4:7084209-7084228 | None:intergenic | 45.0% |
| ! | GGAATCTTTAAGAGCTCCGT+AGG | + | chr8.4:7081943-7081962 | None:intergenic | 45.0% |
| ! | TGCCCATGTCAGAAAAGTGT+AGG | - | chr8.4:7082801-7082820 | MS.gene073315:intron | 45.0% |
| !! | ATATGCTGGTTCACCTTTGC+AGG | - | chr8.4:7084784-7084803 | MS.gene073315:intron | 45.0% |
| !! | GGAACATCATTTGCTGTTGC+TGG | + | chr8.4:7085738-7085757 | None:intergenic | 45.0% |
| !! | TATGCTGGTTCACCTTTGCA+GGG | - | chr8.4:7084785-7084804 | MS.gene073315:CDS | 45.0% |
| !!! | CCATGTTTTGATCTGACGCT+TGG | + | chr8.4:7085214-7085233 | None:intergenic | 45.0% |
| !!! | TGTTTTGATCTGACGCTTGG+CGG | + | chr8.4:7085211-7085230 | None:intergenic | 45.0% |
| ATCCGGCAGTGTTAAGAGCT+TGG | - | chr8.4:7084276-7084295 | MS.gene073315:intron | 50.0% | |
| CAGCTTGGGATTGTTCTGCA+TGG | - | chr8.4:7083132-7083151 | MS.gene073315:CDS | 50.0% | |
| CGTAGGCCTTTCTCCATGTT+TGG | + | chr8.4:7081926-7081945 | None:intergenic | 50.0% | |
| CTACATCAGCTCACCAACCA+AGG | - | chr8.4:7082482-7082501 | MS.gene073315:intron | 50.0% | |
| CTCTTAACACTGCCGGATGT+AGG | + | chr8.4:7084274-7084293 | None:intergenic | 50.0% | |
| CTTATGTTGAGTCAGGCTGG+TGG | - | chr8.4:7085502-7085521 | MS.gene073315:intron | 50.0% | |
| CTTCGAACGTGACGTTCCTT+AGG | + | chr8.4:7082197-7082216 | None:intergenic | 50.0% | |
| CTTGCAATCATACCACCTGG+TGG | - | chr8.4:7084863-7084882 | MS.gene073315:CDS | 50.0% | |
| GCACTTGCAATCATACCACC+TGG | - | chr8.4:7084860-7084879 | MS.gene073315:CDS | 50.0% | |
| GTGGCAACAAAAGAAGGTGG+TGG | + | chr8.4:7084223-7084242 | None:intergenic | 50.0% | |
| TAAAGAAGTTGCTGCAGCGC+CGG | + | chr8.4:7083416-7083435 | None:intergenic | 50.0% | |
| TGAGCTGTTGGAGCAGTTAC+CGG | - | chr8.4:7083394-7083413 | MS.gene073315:intron | 50.0% | |
| TGTAGGTTTGTGTACACCGG+CGG | - | chr8.4:7082589-7082608 | MS.gene073315:intron | 50.0% | |
| !! | GTTTTGATCTGACGCTTGGC+GGG | + | chr8.4:7085210-7085229 | None:intergenic | 50.0% |
| ATCTAGGCCTTACCACCAGG+TGG | + | chr8.4:7084878-7084897 | None:intergenic | 55.0% | |
| CGAACGTGACGTTCCTTAGG+TGG | + | chr8.4:7082194-7082213 | None:intergenic | 55.0% | |
| CTTGGCTAGGCCAACCTTTG+TGG | + | chr8.4:7081964-7081983 | None:intergenic | 55.0% | |
| GAGTATATGGCTGCTGCTGC+TGG | + | chr8.4:7085789-7085808 | None:intergenic | 55.0% | |
| TATGGCTGCTGCTGCTGGTA+AGG | + | chr8.4:7085784-7085803 | None:intergenic | 55.0% | |
| !! | CACAAAGGTTGGCCTAGCCA+AGG | - | chr8.4:7081962-7081981 | MS.gene073315:CDS | 55.0% |
| ATGGCTCCATGCCCCACCAA+GGG | - | chr8.4:7085884-7085903 | MS.gene073315:CDS | 60.0% | |
| TATGGCTCCATGCCCCACCA+AGG | - | chr8.4:7085883-7085902 | MS.gene073315:CDS | 60.0% | |
| GTAGCTCCCTTGGTGGGGCA+TGG | + | chr8.4:7085893-7085912 | None:intergenic | 65.0% | |
| ! | GATCTGACGCTTGGCGGGTG+TGG | + | chr8.4:7085205-7085224 | None:intergenic | 65.0% |
| ! | GCTTGGCGGGTGTGGTTGCT+TGG | + | chr8.4:7085197-7085216 | None:intergenic | 65.0% |
| GCGGGTGTGGTTGCTTGGCG+TGG | + | chr8.4:7085192-7085211 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 7081912 | 7085924 | 7081912 | ID=MS.gene073315 |
| chr8.4 | mRNA | 7081912 | 7085924 | 7081912 | ID=MS.gene073315.t1;Parent=MS.gene073315 |
| chr8.4 | exon | 7085835 | 7085924 | 7085835 | ID=MS.gene073315.t1.exon1;Parent=MS.gene073315.t1 |
| chr8.4 | CDS | 7085835 | 7085924 | 7085835 | ID=cds.MS.gene073315.t1;Parent=MS.gene073315.t1 |
| chr8.4 | exon | 7085621 | 7085690 | 7085621 | ID=MS.gene073315.t1.exon2;Parent=MS.gene073315.t1 |
| chr8.4 | CDS | 7085621 | 7085690 | 7085621 | ID=cds.MS.gene073315.t1;Parent=MS.gene073315.t1 |
| chr8.4 | exon | 7085269 | 7085366 | 7085269 | ID=MS.gene073315.t1.exon3;Parent=MS.gene073315.t1 |
| chr8.4 | CDS | 7085269 | 7085366 | 7085269 | ID=cds.MS.gene073315.t1;Parent=MS.gene073315.t1 |
| chr8.4 | exon | 7084785 | 7084923 | 7084785 | ID=MS.gene073315.t1.exon4;Parent=MS.gene073315.t1 |
| chr8.4 | CDS | 7084785 | 7084923 | 7084785 | ID=cds.MS.gene073315.t1;Parent=MS.gene073315.t1 |
| chr8.4 | exon | 7084571 | 7084701 | 7084571 | ID=MS.gene073315.t1.exon5;Parent=MS.gene073315.t1 |
| chr8.4 | CDS | 7084571 | 7084701 | 7084571 | ID=cds.MS.gene073315.t1;Parent=MS.gene073315.t1 |
| chr8.4 | exon | 7084382 | 7084474 | 7084382 | ID=MS.gene073315.t1.exon6;Parent=MS.gene073315.t1 |
| chr8.4 | CDS | 7084382 | 7084474 | 7084382 | ID=cds.MS.gene073315.t1;Parent=MS.gene073315.t1 |
| chr8.4 | exon | 7084215 | 7084265 | 7084215 | ID=MS.gene073315.t1.exon7;Parent=MS.gene073315.t1 |
| chr8.4 | CDS | 7084215 | 7084265 | 7084215 | ID=cds.MS.gene073315.t1;Parent=MS.gene073315.t1 |
| chr8.4 | exon | 7084024 | 7084089 | 7084024 | ID=MS.gene073315.t1.exon8;Parent=MS.gene073315.t1 |
| chr8.4 | CDS | 7084024 | 7084089 | 7084024 | ID=cds.MS.gene073315.t1;Parent=MS.gene073315.t1 |
| chr8.4 | exon | 7083874 | 7083939 | 7083874 | ID=MS.gene073315.t1.exon9;Parent=MS.gene073315.t1 |
| chr8.4 | CDS | 7083874 | 7083939 | 7083874 | ID=cds.MS.gene073315.t1;Parent=MS.gene073315.t1 |
| chr8.4 | exon | 7083697 | 7083777 | 7083697 | ID=MS.gene073315.t1.exon10;Parent=MS.gene073315.t1 |
| chr8.4 | CDS | 7083697 | 7083777 | 7083697 | ID=cds.MS.gene073315.t1;Parent=MS.gene073315.t1 |
| chr8.4 | exon | 7083539 | 7083616 | 7083539 | ID=MS.gene073315.t1.exon11;Parent=MS.gene073315.t1 |
| chr8.4 | CDS | 7083539 | 7083616 | 7083539 | ID=cds.MS.gene073315.t1;Parent=MS.gene073315.t1 |
| chr8.4 | exon | 7083124 | 7083300 | 7083124 | ID=MS.gene073315.t1.exon12;Parent=MS.gene073315.t1 |
| chr8.4 | CDS | 7083124 | 7083300 | 7083124 | ID=cds.MS.gene073315.t1;Parent=MS.gene073315.t1 |
| chr8.4 | exon | 7082952 | 7083030 | 7082952 | ID=MS.gene073315.t1.exon13;Parent=MS.gene073315.t1 |
| chr8.4 | CDS | 7082952 | 7083030 | 7082952 | ID=cds.MS.gene073315.t1;Parent=MS.gene073315.t1 |
| chr8.4 | exon | 7082604 | 7082716 | 7082604 | ID=MS.gene073315.t1.exon14;Parent=MS.gene073315.t1 |
| chr8.4 | CDS | 7082604 | 7082716 | 7082604 | ID=cds.MS.gene073315.t1;Parent=MS.gene073315.t1 |
| chr8.4 | exon | 7081912 | 7082319 | 7081912 | ID=MS.gene073315.t1.exon15;Parent=MS.gene073315.t1 |
| chr8.4 | CDS | 7081912 | 7082319 | 7081912 | ID=cds.MS.gene073315.t1;Parent=MS.gene073315.t1 |
| Gene Sequence |
| Protein sequence |
