AlfalfaGEDB | MS.gene073397

M. sativa cultivar XinJiangDaYe / MS.gene073397

KEGG: -
GO: -
PFAM: PF16913.8

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073397.t1	XP_013463315.1	97.5	317	8	0	44	360	98	414	3.70E-150	541.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073397.t1	Q9SY29	60.3	302	114	3	47	346	56	353	1.2e-93	344.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073397.t1	A0A072V6T6	97.5	317	8	0	44	360	98	414	2.6e-150	541.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050670	MS.gene073397	0.826012	3.43E-54	-1.69E-46
MS.gene052188	MS.gene073397	0.846469	2.13E-59	-1.69E-46
MS.gene052340	MS.gene073397	0.846279	2.40E-59	-1.69E-46
MS.gene053928	MS.gene073397	0.836561	8.71E-57	-1.69E-46
MS.gene054349	MS.gene073397	0.834682	2.60E-56	-1.69E-46
MS.gene055116	MS.gene073397	0.820393	7.02E-53	-1.69E-46
MS.gene05553	MS.gene073397	0.836358	9.81E-57	-1.69E-46
MS.gene056659	MS.gene073397	0.833965	3.94E-56	-1.69E-46
MS.gene056723	MS.gene073397	0.818987	1.47E-52	-1.69E-46
MS.gene057396	MS.gene073397	0.816445	5.51E-52	-1.69E-46
MS.gene057749	MS.gene073397	0.814785	1.29E-51	-1.69E-46
MS.gene057823	MS.gene073397	0.812549	4.01E-51	-1.69E-46
MS.gene058007	MS.gene073397	0.816039	6.79E-52	-1.69E-46
MS.gene058949	MS.gene073397	0.827435	1.57E-54	-1.69E-46
MS.gene05907	MS.gene073397	0.806698	7.25E-50	-1.69E-46
MS.gene059420	MS.gene073397	0.824771	6.74E-54	-1.69E-46
MS.gene059462	MS.gene073397	0.801281	9.70E-49	-1.69E-46
MS.gene059692	MS.gene073397	0.810884	9.23E-51	-1.69E-46
MS.gene059695	MS.gene073397	0.813695	2.25E-51	-1.69E-46
MS.gene05984	MS.gene073397	0.802212	6.25E-49	-1.69E-46
MS.gene060247	MS.gene073397	0.804252	2.36E-49	-1.69E-46
MS.gene061049	MS.gene073397	0.814257	1.69E-51	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073397.t1	MTR_2g437590	97.476	317	8	0	44	360	98	414	0.0	634
MS.gene073397.t1	MTR_2g437580	83.974	312	48	2	44	354	78	388	0.0	516
MS.gene073397.t1	MTR_3g099740	38.585	311	172	4	45	337	45	354	7.01e-67	215
MS.gene073397.t1	MTR_3g099750	37.143	315	171	4	45	337	44	353	3.56e-64	208
MS.gene073397.t1	MTR_5g065080	35.220	318	184	5	45	349	48	356	1.08e-60	199
MS.gene073397.t1	MTR_7g080750	33.442	308	184	5	45	345	57	350	1.48e-48	167
MS.gene073397.t1	MTR_2g015470	33.121	314	197	5	45	351	70	377	1.90e-48	168
MS.gene073397.t1	MTR_3g058660	35.350	314	178	8	45	343	43	346	5.04e-42	150
MS.gene073397.t1	MTR_4g098900	33.227	313	172	9	45	343	63	352	2.28e-41	150
MS.gene073397.t1	MTR_8g024620	32.069	290	180	8	45	326	70	350	8.32e-37	136
MS.gene073397.t1	MTR_8g024620	32.069	290	180	8	45	326	81	361	8.57e-37	136
MS.gene073397.t1	MTR_8g024620	32.069	290	180	8	45	326	82	362	8.73e-37	136
MS.gene073397.t1	MTR_6g082540	30.994	171	109	5	182	348	4	169	3.31e-18	81.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene073397.t1	AT1G30840	68.662	284	87	2	45	326	54	337	2.64e-131	380
MS.gene073397.t1	AT1G30840	68.662	284	87	2	45	326	54	337	2.64e-131	380
MS.gene073397.t1	AT1G28220	36.424	302	182	4	45	338	32	331	7.97e-66	212
MS.gene073397.t1	AT1G28230	36.503	326	187	4	45	355	32	352	2.63e-63	206
MS.gene073397.t1	AT2G33750	37.829	304	178	5	42	337	31	331	1.20e-59	196
MS.gene073397.t1	AT2G33750	36.508	315	178	6	42	337	31	342	2.39e-56	188
MS.gene073397.t1	AT4G08700	34.471	293	183	4	45	333	64	351	1.17e-45	160
MS.gene073397.t1	AT1G44750	33.333	294	192	2	45	335	60	352	5.41e-44	155
MS.gene073397.t1	AT1G44750	33.333	294	192	2	45	335	60	352	5.41e-44	155
MS.gene073397.t1	AT1G44750	33.333	294	192	2	45	335	72	364	5.76e-44	156
MS.gene073397.t1	AT4G18220	35.117	299	177	6	42	330	70	361	1.20e-43	155
MS.gene073397.t1	AT1G44750	34.008	247	159	2	92	335	43	288	1.79e-42	150
MS.gene073397.t1	AT1G44750	34.008	247	159	2	92	335	43	288	1.79e-42	150
MS.gene073397.t1	AT1G44750	34.008	247	159	2	92	335	43	288	1.79e-42	150
MS.gene073397.t1	AT1G44750	34.008	247	159	2	92	335	43	288	1.79e-42	150
MS.gene073397.t1	AT1G44750	34.008	247	159	2	92	335	43	288	1.79e-42	150
MS.gene073397.t1	AT5G41160	32.423	293	192	4	45	333	64	354	1.16e-39	144
MS.gene073397.t1	AT4G18190	32.609	322	192	9	45	348	64	378	5.46e-39	143
MS.gene073397.t1	AT4G18210	32.911	316	193	7	45	348	73	381	1.28e-37	139
MS.gene073397.t1	AT4G18195	32.026	306	186	8	42	335	71	366	5.17e-32	124
MS.gene073397.t1	AT4G18205	29.667	300	201	5	42	335	65	360	6.67e-32	124
MS.gene073397.t1	AT2G24220	29.032	279	191	3	45	320	84	358	1.60e-27	112
MS.gene073397.t1	AT2G24220	29.032	279	191	3	45	320	66	340	1.88e-27	111
MS.gene073397.t1	AT4G18197	28.333	300	205	5	42	335	68	363	5.03e-27	110
MS.gene073397.t1	AT1G57990	25.312	320	214	8	42	344	76	387	8.46e-17	81.3
MS.gene073397.t1	AT1G57980	27.469	324	202	11	42	346	80	389	2.84e-16	79.7
MS.gene073397.t1	AT1G57943	23.585	318	223	7	42	344	82	394	2.16e-15	77.4
MS.gene073397.t1	AT1G57943	23.585	318	223	7	42	344	83	395	2.19e-15	77.4
MS.gene073397.t1	AT1G09860	24.850	334	217	12	38	346	57	381	4.11e-14	73.2
MS.gene073397.t1	AT1G19770	25.000	276	182	8	73	328	116	386	8.76e-13	69.3
MS.gene073397.t1	AT1G47603	26.220	328	204	10	21	328	67	376	4.16e-12	67.4

Find 55 sgRNAs with CRISPR-Local

Find 99 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATAAGGGAAGTAGAGTTTAT+TGG	0.279865	2.4:-54305536	MS.gene073397:CDS
TTATAAACCTTCTCCATAAC+TGG	0.280738	2.4:+54305693	None:intergenic
TGGTGAGATTGAGGAGATAA+GGG	0.288450	2.4:+54306069	None:intergenic
TTCTTGACATCTTCATTAAC+TGG	0.298768	2.4:-54305450	MS.gene073397:CDS
TGCACTTTATTTACCAGTTA+TGG	0.308330	2.4:-54305706	MS.gene073397:CDS
AGTTTATTGGGTGACGGTTA+TGG	0.334506	2.4:-54305523	MS.gene073397:CDS
TAAGGGAAGTAGAGTTTATT+GGG	0.337303	2.4:-54305535	MS.gene073397:CDS
TTGGTGAGATTGAGGAGATA+AGG	0.343021	2.4:+54306068	None:intergenic
TGTTTCTTCTTGATGATCAA+TGG	0.353300	2.4:+54306340	None:intergenic
TCCACAAAGGTTCAAGCAAA+TGG	0.354436	2.4:-54306148	MS.gene073397:intron
CAAGCAAATGGGTCTCTACT+TGG	0.360905	2.4:-54306136	MS.gene073397:CDS
AATGGAAATGCAGCTTATAA+TGG	0.372098	2.4:-54305646	MS.gene073397:CDS
ATCAGTGAAAGGGTTTCTTT+TGG	0.372970	2.4:+54306049	None:intergenic
AAAAGTTTATTGTTACGAAA+TGG	0.388851	2.4:-54305670	MS.gene073397:CDS
GTTGTTTATAGAGATGAATT+TGG	0.416669	2.4:-54305378	MS.gene073397:CDS
TCTACTTGGGTTCAATGTGC+TGG	0.422043	2.4:-54306122	MS.gene073397:CDS
TTGAGTACTATGAGAAGAAG+TGG	0.434168	2.4:-54305228	MS.gene073397:CDS
AAAAGTGCTGAAGTTGAAAC+AGG	0.437415	2.4:+54305936	None:intergenic
TTATTGTTACGAAATGGTAA+TGG	0.444001	2.4:-54305664	MS.gene073397:CDS
GTTAAGATGTTGGAAGAGAA+AGG	0.463040	2.4:-54305288	MS.gene073397:CDS
TTGTTGTCTATGAATGTGTT+GGG	0.470612	2.4:-54305408	MS.gene073397:CDS
TTTGTTGTCTATGAATGTGT+TGG	0.476057	2.4:-54305409	MS.gene073397:CDS
AGAGAAAGGGAAGATCGTTA+AGG	0.485099	2.4:-54305274	MS.gene073397:CDS
CCACAAAGGTTCAAGCAAAT+GGG	0.489497	2.4:-54306147	MS.gene073397:intron
TTGGTGTGAAATCAGTGAAA+GGG	0.497171	2.4:+54306039	None:intergenic
TTAAGATGTTGGAAGAGAAA+GGG	0.499536	2.4:-54305287	MS.gene073397:CDS
TCTAGTAGTGAGAGACCAAA+AGG	0.503256	2.4:-54305789	MS.gene073397:CDS
TTTGATCATTTGCATGCAGG+TGG	0.522538	2.4:+54306273	None:intergenic
AGAAATGAAGAGAGAAAGTG+AGG	0.526851	2.4:-54305568	MS.gene073397:CDS
TGACATCTTCATTAACTGGT+GGG	0.528350	2.4:-54305446	MS.gene073397:CDS
TTGTTGTTGACGAATGGTGA+TGG	0.531442	2.4:+54306299	None:intergenic
AGCGACAGTGGGAATGGCGT+GGG	0.535390	2.4:-54305604	MS.gene073397:CDS
TTGACATCTTCATTAACTGG+TGG	0.536861	2.4:-54305447	MS.gene073397:CDS
TTTGGTGTGAAATCAGTGAA+AGG	0.536940	2.4:+54306038	None:intergenic
AAGCAAATGGGTCTCTACTT+GGG	0.537370	2.4:-54306135	MS.gene073397:CDS
GGAAAGGAATGATTCTTCCA+TGG	0.538536	2.4:-54305253	MS.gene073397:CDS
AGAAGAAGTGGAGGTGCAGC+TGG	0.540825	2.4:-54305216	MS.gene073397:CDS
TGGTATGTATGTTAAGATGT+TGG	0.542161	2.4:-54305298	MS.gene073397:CDS
AAGTAGAGTTTATTGGGTGA+CGG	0.542295	2.4:-54305529	MS.gene073397:CDS
GTGGGAATGGCGTGGGACGG+CGG	0.550756	2.4:-54305597	MS.gene073397:CDS
AAGGGAAGATCGTTAAGGAA+AGG	0.560916	2.4:-54305269	MS.gene073397:CDS
ACAGTGGGAATGGCGTGGGA+CGG	0.571066	2.4:-54305600	MS.gene073397:CDS
TTATTTACCAGTTATGGAGA+AGG	0.571264	2.4:-54305700	MS.gene073397:CDS
TATAATGGAGATTGCAGCGA+CGG	0.573317	2.4:-54305631	MS.gene073397:CDS
TAGCGACAGTGGGAATGGCG+TGG	0.574181	2.4:-54305605	MS.gene073397:CDS
AAAATTGGGATAATTAAGAG+AGG	0.574293	2.4:+54306095	None:intergenic
AAATAACAACCCTGCACCAA+GGG	0.586933	2.4:+54305728	None:intergenic
GTTTATAGAGATGAATTTGG+TGG	0.600174	2.4:-54305375	MS.gene073397:CDS
TCTCATAGTACTCAACTCCA+TGG	0.606411	2.4:+54305236	None:intergenic
TTGTCTATGAATGTGTTGGG+TGG	0.612302	2.4:-54305405	MS.gene073397:CDS
AAATTGGGATAATTAAGAGA+GGG	0.621177	2.4:+54306096	None:intergenic
AATGAAGAGAGAAAGTGAGG+AGG	0.621575	2.4:-54305565	MS.gene073397:CDS
CAAATAACAACCCTGCACCA+AGG	0.641471	2.4:+54305727	None:intergenic
TTATGGCGAATGTCGTGACG+TGG	0.680193	2.4:-54305506	MS.gene073397:CDS
AGTACTATGAGAAGAAGTGG+AGG	0.697026	2.4:-54305225	MS.gene073397:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ACAAAAAAAGAATACTTTAT+TGG	-	chr2.4:54305814-54305833	MS.gene073397:CDS	15.0%
!!	AAAAGTTTATTGTTACGAAA+TGG	-	chr2.4:54305906-54305925	MS.gene073397:CDS	20.0%
!!!	TAACAATCTTTTAATCTCAT+GGG	-	chr2.4:54305603-54305622	MS.gene073397:CDS	20.0%
!!!	TTAACAATCTTTTAATCTCA+TGG	-	chr2.4:54305602-54305621	MS.gene073397:CDS	20.0%
!	AAAAATCCATCACAAACAAA+AGG	-	chr2.4:54305323-54305342	MS.gene073397:CDS	25.0%
!	AAAATTGGGATAATTAAGAG+AGG	+	chr2.4:54305484-54305503	None:intergenic	25.0%
!	AAATACTATTTCATCCACAA+AGG	-	chr2.4:54305415-54305434	MS.gene073397:CDS	25.0%
!	AAATTGGGATAATTAAGAGA+GGG	+	chr2.4:54305483-54305502	None:intergenic	25.0%
!	GATACCAACAAAAATTGATA+GGG	+	chr2.4:54305572-54305591	None:intergenic	25.0%
!	GTTGTTTATAGAGATGAATT+TGG	-	chr2.4:54306198-54306217	MS.gene073397:intron	25.0%
!	TGATACCAACAAAAATTGAT+AGG	+	chr2.4:54305573-54305592	None:intergenic	25.0%
!	TTATTGTTACGAAATGGTAA+TGG	-	chr2.4:54305912-54305931	MS.gene073397:CDS	25.0%
!!	AACAATCTTTTAATCTCATG+GGG	-	chr2.4:54305604-54305623	MS.gene073397:CDS	25.0%
!!	ATTGATAGGGTTAACATTTT+TGG	+	chr2.4:54305559-54305578	None:intergenic	25.0%
!!	ATTTTTGTTGGTATCATGTT+AGG	-	chr2.4:54305577-54305596	MS.gene073397:CDS	25.0%
!!	GGATTTTGTTCTTATGTTTA+TGG	-	chr2.4:54306258-54306277	MS.gene073397:CDS	25.0%
!!	TTAACCCTATCAATTTTTGT+TGG	-	chr2.4:54305565-54305584	MS.gene073397:CDS	25.0%
!!	TTTTTGTTGGTATCATGTTA+GGG	-	chr2.4:54305578-54305597	MS.gene073397:CDS	25.0%
!!!	TCTTTTTTTGTTAGTCCTTT+TGG	+	chr2.4:54305805-54305824	None:intergenic	25.0%
	AATGGAAATGCAGCTTATAA+TGG	-	chr2.4:54305930-54305949	MS.gene073397:CDS	30.0%
	AGAGGTAGTTGATTATCAAA+AGG	+	chr2.4:54305357-54305376	None:intergenic	30.0%
	AGGTAGTTGATTATCAAAAG+GGG	+	chr2.4:54305355-54305374	None:intergenic	30.0%
	ATAAGGGAAGTAGAGTTTAT+TGG	-	chr2.4:54306040-54306059	MS.gene073397:CDS	30.0%
	GAGGTAGTTGATTATCAAAA+GGG	+	chr2.4:54305356-54305375	None:intergenic	30.0%
	GTTTATAGAGATGAATTTGG+TGG	-	chr2.4:54306201-54306220	MS.gene073397:intron	30.0%
	TAAGGGAAGTAGAGTTTATT+GGG	-	chr2.4:54306041-54306060	MS.gene073397:CDS	30.0%
	TGGTATGTATGTTAAGATGT+TGG	-	chr2.4:54306278-54306297	MS.gene073397:CDS	30.0%
	TTAAGATGTTGGAAGAGAAA+GGG	-	chr2.4:54306289-54306308	MS.gene073397:CDS	30.0%
	TTATAAACCTTCTCCATAAC+TGG	+	chr2.4:54305886-54305905	None:intergenic	30.0%
	TTATTTACCAGTTATGGAGA+AGG	-	chr2.4:54305876-54305895	MS.gene073397:CDS	30.0%
	TTCTTGACATCTTCATTAAC+TGG	-	chr2.4:54306126-54306145	MS.gene073397:CDS	30.0%
	TTGTTGTCTATGAATGTGTT+GGG	-	chr2.4:54306168-54306187	MS.gene073397:intron	30.0%
!	ATTTTTGATCATTTGCATGC+AGG	+	chr2.4:54305309-54305328	None:intergenic	30.0%
!	TGCACTTTATTTACCAGTTA+TGG	-	chr2.4:54305870-54305889	MS.gene073397:CDS	30.0%
!	TGTTTCTTCTTGATGATCAA+TGG	+	chr2.4:54305239-54305258	None:intergenic	30.0%
!	TTCAACTGTTTTGTGTATGT+GGG	-	chr2.4:54306236-54306255	MS.gene073397:intron	30.0%
!	TTTCAACTGTTTTGTGTATG+TGG	-	chr2.4:54306235-54306254	MS.gene073397:intron	30.0%
!	TTTGTTGTCTATGAATGTGT+TGG	-	chr2.4:54306167-54306186	MS.gene073397:intron	30.0%
!!	GATCTTTTGTTTCACTATGA+TGG	+	chr2.4:54305704-54305723	None:intergenic	30.0%
	AACTACCTCTTACTCTTTGT+TGG	-	chr2.4:54305367-54305386	MS.gene073397:CDS	35.0%
	AAGTAGAGTTTATTGGGTGA+CGG	-	chr2.4:54306047-54306066	MS.gene073397:CDS	35.0%
	AGAAATGAAGAGAGAAAGTG+AGG	-	chr2.4:54306008-54306027	MS.gene073397:CDS	35.0%
	AGGAGATAAGGGAGAAAAAT+TGG	+	chr2.4:54305499-54305518	None:intergenic	35.0%
	GGAGATAAGGGAGAAAAATT+GGG	+	chr2.4:54305498-54305517	None:intergenic	35.0%
	GTTAAGATGTTGGAAGAGAA+AGG	-	chr2.4:54306288-54306307	MS.gene073397:CDS	35.0%
	TGACATCTTCATTAACTGGT+GGG	-	chr2.4:54306130-54306149	MS.gene073397:CDS	35.0%
	TTGAACCAACAAAGAGTAAG+AGG	+	chr2.4:54305375-54305394	None:intergenic	35.0%
	TTGACATCTTCATTAACTGG+TGG	-	chr2.4:54306129-54306148	MS.gene073397:CDS	35.0%
	TTGAGTACTATGAGAAGAAG+TGG	-	chr2.4:54306348-54306367	MS.gene073397:CDS	35.0%
	TTGGTGTGAAATCAGTGAAA+GGG	+	chr2.4:54305540-54305559	None:intergenic	35.0%
!	AAGTGAGGAGGTTTTTGATA+AGG	-	chr2.4:54306023-54306042	MS.gene073397:CDS	35.0%
!	AGTGAGGAGGTTTTTGATAA+GGG	-	chr2.4:54306024-54306043	MS.gene073397:CDS	35.0%
!	ATCAGTGAAAGGGTTTCTTT+TGG	+	chr2.4:54305530-54305549	None:intergenic	35.0%
!	TCAACTGTTTTGTGTATGTG+GGG	-	chr2.4:54306237-54306256	MS.gene073397:intron	35.0%
!	TTTGGTGTGAAATCAGTGAA+AGG	+	chr2.4:54305541-54305560	None:intergenic	35.0%
!!	AAAAGTGCTGAAGTTGAAAC+AGG	+	chr2.4:54305643-54305662	None:intergenic	35.0%
!!	CATGTACCTTTTGTTTGTGA+TGG	+	chr2.4:54305332-54305351	None:intergenic	35.0%
!!!	ACGTGGCAGTTTTGTTTTAT+GGG	-	chr2.4:54306087-54306106	MS.gene073397:CDS	35.0%
!!!	TGGTTTTTGTTGTTGACGAA+TGG	+	chr2.4:54305286-54305305	None:intergenic	35.0%
	AAATAACAACCCTGCACCAA+GGG	+	chr2.4:54305851-54305870	None:intergenic	40.0%
	AAGCAAATGGGTCTCTACTT+GGG	-	chr2.4:54305441-54305460	MS.gene073397:CDS	40.0%
	AAGGGAAGATCGTTAAGGAA+AGG	-	chr2.4:54306307-54306326	MS.gene073397:CDS	40.0%
	AATGAAGAGAGAAAGTGAGG+AGG	-	chr2.4:54306011-54306030	MS.gene073397:CDS	40.0%
	AGAGAAAGGGAAGATCGTTA+AGG	-	chr2.4:54306302-54306321	MS.gene073397:CDS	40.0%
	AGTACTATGAGAAGAAGTGG+AGG	-	chr2.4:54306351-54306370	MS.gene073397:CDS	40.0%
	CCACAAAGGTTCAAGCAAAT+GGG	-	chr2.4:54305429-54305448	MS.gene073397:CDS	40.0%
	GGAAAGGAATGATTCTTCCA+TGG	-	chr2.4:54306323-54306342	MS.gene073397:CDS	40.0%
	TCCACAAAGGTTCAAGCAAA+TGG	-	chr2.4:54305428-54305447	MS.gene073397:CDS	40.0%
	TCTAGTAGTGAGAGACCAAA+AGG	-	chr2.4:54305787-54305806	MS.gene073397:CDS	40.0%
	TCTCATAGTACTCAACTCCA+TGG	+	chr2.4:54306343-54306362	None:intergenic	40.0%
	TGGTGAGATTGAGGAGATAA+GGG	+	chr2.4:54305510-54305529	None:intergenic	40.0%
	TTGGTGAGATTGAGGAGATA+AGG	+	chr2.4:54305511-54305530	None:intergenic	40.0%
	TTGTCTATGAATGTGTTGGG+TGG	-	chr2.4:54306171-54306190	MS.gene073397:intron	40.0%
	TTTGATCATTTGCATGCAGG+TGG	+	chr2.4:54305306-54305325	None:intergenic	40.0%
!	AGTTTATTGGGTGACGGTTA+TGG	-	chr2.4:54306053-54306072	MS.gene073397:CDS	40.0%
!	ATTGGATTCTTTTGCACCCT+TGG	-	chr2.4:54305832-54305851	MS.gene073397:CDS	40.0%
!	GGTTTCTTTTGGTGAGATTG+AGG	+	chr2.4:54305519-54305538	None:intergenic	40.0%
!	TATAATGGAGATTGCAGCGA+CGG	-	chr2.4:54305945-54305964	MS.gene073397:CDS	40.0%
!	TTGTTGTTGACGAATGGTGA+TGG	+	chr2.4:54305280-54305299	None:intergenic	40.0%
!!!	CGTGGCAGTTTTGTTTTATG+GGG	-	chr2.4:54306088-54306107	MS.gene073397:CDS	40.0%
!!!	GACGTGGCAGTTTTGTTTTA+TGG	-	chr2.4:54306086-54306105	MS.gene073397:CDS	40.0%
!!!	TTTGTTTTATGGGGACTGCT+GGG	-	chr2.4:54306097-54306116	MS.gene073397:CDS	40.0%
!!!	TTTTGTTTTATGGGGACTGC+TGG	-	chr2.4:54306096-54306115	MS.gene073397:CDS	40.0%
	CAAATAACAACCCTGCACCA+AGG	+	chr2.4:54305852-54305871	None:intergenic	45.0%
	CAAGCAAATGGGTCTCTACT+TGG	-	chr2.4:54305440-54305459	MS.gene073397:CDS	45.0%
	CCCATTTGCTTGAACCTTTG+TGG	+	chr2.4:54305432-54305451	None:intergenic	45.0%
	TCTACTTGGGTTCAATGTGC+TGG	-	chr2.4:54305454-54305473	MS.gene073397:CDS	45.0%
	TTATGGCGAATGTCGTGACG+TGG	-	chr2.4:54306070-54306089	MS.gene073397:CDS	50.0%
!	TTTTATGGGGACTGCTGGGA+TGG	-	chr2.4:54306101-54306120	MS.gene073397:CDS	50.0%
!!	GGTTTTAGCGACAGTGGGAA+TGG	-	chr2.4:54305966-54305985	MS.gene073397:CDS	50.0%
!!	TCTTTTGCACCCTTGGTGCA+GGG	-	chr2.4:54305839-54305858	MS.gene073397:CDS	50.0%
!!	TTCTTTTGCACCCTTGGTGC+AGG	-	chr2.4:54305838-54305857	MS.gene073397:CDS	50.0%
!	AGAAGAAGTGGAGGTGCAGC+TGG	-	chr2.4:54306360-54306379	MS.gene073397:CDS	55.0%
!!	AGCGACGGTTTTAGCGACAG+TGG	-	chr2.4:54305960-54305979	MS.gene073397:CDS	55.0%
!!	GCGACGGTTTTAGCGACAGT+GGG	-	chr2.4:54305961-54305980	MS.gene073397:CDS	55.0%
	ACAGTGGGAATGGCGTGGGA+CGG	-	chr2.4:54305976-54305995	MS.gene073397:CDS	60.0%
	AGCGACAGTGGGAATGGCGT+GGG	-	chr2.4:54305972-54305991	MS.gene073397:CDS	60.0%
	TAGCGACAGTGGGAATGGCG+TGG	-	chr2.4:54305971-54305990	MS.gene073397:CDS	60.0%
	GTGGGAATGGCGTGGGACGG+CGG	-	chr2.4:54305979-54305998	MS.gene073397:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.4	gene	54305212	54306386	54305212	ID=MS.gene073397
chr2.4	mRNA	54305212	54306386	54305212	ID=MS.gene073397.t1;Parent=MS.gene073397
chr2.4	exon	54306254	54306386	54306254	ID=MS.gene073397.t1.exon1;Parent=MS.gene073397.t1
chr2.4	CDS	54306254	54306386	54306254	ID=cds.MS.gene073397.t1;Parent=MS.gene073397.t1
chr2.4	exon	54305212	54306161	54305212	ID=MS.gene073397.t1.exon2;Parent=MS.gene073397.t1
chr2.4	CDS	54305212	54306161	54305212	ID=cds.MS.gene073397.t1;Parent=MS.gene073397.t1

Gene Sequence

>MS.gene073397

ATGAAGACACAATTGACATTGAAGCCATTGATCATCAAGAAGAAACACAAAAACATCAAAATCAACCATCACCATTCGTCAACAACAAAAACCACCTGCATGCAAATGATCAAAAATCCATCACAAACAAAAGGTACATGCCCCTTTTGATAATCAACTACCTCTTACTCTTTGTTGGTTCAATCTCATCAAGTTTACTCTCAAAATACTATTTCATCCACAAAGGTTCAAGCAAATGGGTCTCTACTTGGGTTCAATGTGCTGGCTTCCCTCTCTTAATTATCCCAATTTTTCTCCCTTATCTCCTCAATCTCACCAAAAGAAACCCTTTCACTGATTTCACACCAAAAATGTTAACCCTATCAATTTTTGTTGGTATCATGTTAGGGTTTAACAATCTTTTAATCTCATGGGGTGTTGCATATCTACCTGTTTCAACTTCAGCACTTTTACTATCATCACAGCTTGTTTTTAATCTCATTCTCTCAGCCATCATAGTGAAACAAAAGATCACTTTTTCAAATCTCAATTGTGTTATTCTTCTCACATTGAGTTCAATCATTCTTGCATTGAATTCTAGTAGTGAGAGACCAAAAGGACTAACAAAAAAAGAATACTTTATTGGATTCTTTTGCACCCTTGGTGCAGGGTTGTTATTTGCACTTTATTTACCAGTTATGGAGAAGGTTTATAAAAAAGTTTATTGTTACGAAATGGTAATGGAAATGCAGCTTATAATGGAGATTGCAGCGACGGTTTTAGCGACAGTGGGAATGGCGTGGGACGGCGGATTTAAAGAAATGAAGAGAGAAAGTGAGGAGGTTTTTGATAAGGGAAGTAGAGTTTATTGGGTGACGGTTATGGCGAATGTCGTGACGTGGCAGTTTTGTTTTATGGGGACTGCTGGGATGGTTTTCTTGACATCTTCATTAACTGGTGGGATTTGTATGACAGCTTTGTTGTCTATGAATGTGTTGGGTGGTGTTGTTGTTTATAGAGATGAATTTGGTGGTTTGAAAGCTGTTTCAACTGTTTTGTGTATGTGGGGATTTTGTTCTTATGTTTATGGTATGTATGTTAAGATGTTGGAAGAGAAAGGGAAGATCGTTAAGGAAAGGAATGATTCTTCCATGGAGTTGAGTACTATGAGAAGAAGTGGAGGTGCAGCTGGTTGA

Protein sequence

>MS.gene073397.t1

MKTQLTLKPLIIKKKHKNIKINHHHSSTTKTTCMQMIKNPSQTKGSSKWVSTWVQCAGFPLLIIPIFLPYLLNLTKRNPFTDFTPKMLTLSIFVGIMLGFNNLLISWGVAYLPVSTSALLLSSQLVFNLILSAIIVKQKITFSNLNCVILLTLSSIILALNSSSERPKGLTKKEYFIGFFCTLGAGLLFALYLPVMEKVYKKVYCYEMVMEMQLIMEIAATVLATVGMAWDGGFKEMKRESEEVFDKGSRVYWVTVMANVVTWQFCFMGTAGMVFLTSSLTGGICMTALLSMNVLGGVVVYRDEFGGLKAVSTVLCMWGFCSYVYGMYVKMLEEKGKIVKERNDSSMELSTMRRSGGAAG