Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074420.t1 | XP_003601304.1 | 99 | 289 | 3 | 0 | 1 | 289 | 1 | 289 | 5.00E-150 | 540.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074420.t1 | F4IK01 | 74.5 | 282 | 71 | 1 | 5 | 285 | 13 | 294 | 2.8e-109 | 396.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074420.t1 | G7J611 | 99.0 | 289 | 3 | 0 | 1 | 289 | 1 | 289 | 3.6e-150 | 540.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050071 | MS.gene074420 | 0.810082 | 1.38E-50 | -1.69E-46 |
| MS.gene052275 | MS.gene074420 | 0.845943 | 2.96E-59 | -1.69E-46 |
| MS.gene055331 | MS.gene074420 | 0.806929 | 6.48E-50 | -1.69E-46 |
| MS.gene055616 | MS.gene074420 | 0.810233 | 1.28E-50 | -1.69E-46 |
| MS.gene056266 | MS.gene074420 | -0.839466 | 1.56E-57 | -1.69E-46 |
| MS.gene061044 | MS.gene074420 | 0.816681 | 4.88E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene24383 | MS.gene074420 | PPI |
| MS.gene35150 | MS.gene074420 | PPI |
| MS.gene074420 | MS.gene67108 | PPI |
| MS.gene023147 | MS.gene074420 | PPI |
| MS.gene062778 | MS.gene074420 | PPI |
| MS.gene074420 | MS.gene028307 | PPI |
| MS.gene074420 | MS.gene36485 | PPI |
| MS.gene074420 | MS.gene044021 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074420.t1 | MTR_3g079220 | 98.962 | 289 | 3 | 0 | 1 | 289 | 1 | 289 | 0.0 | 584 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074420.t1 | AT2G41350 | 74.733 | 281 | 71 | 0 | 5 | 285 | 13 | 293 | 7.72e-154 | 432 |
| MS.gene074420.t1 | AT2G41350 | 74.468 | 282 | 71 | 1 | 5 | 285 | 13 | 294 | 4.76e-152 | 427 |
| MS.gene074420.t1 | AT2G21980 | 79.310 | 58 | 12 | 0 | 228 | 285 | 1 | 58 | 1.14e-24 | 94.4 |
Find 73 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTGCAACTTCGAAGGTTT+TGG | 0.267923 | 3.4:+75397183 | None:intergenic |
| GAGACGAGCGGCTTCGTCTT+TGG | 0.285848 | 3.4:+75397087 | None:intergenic |
| TCAGTCTCCACAGAAGTTTC+TGG | 0.296590 | 3.4:-75397232 | MS.gene074420:CDS |
| TGCAAGGATTAGAGAGATTC+TGG | 0.305262 | 3.4:-75396929 | MS.gene074420:CDS |
| AGAGATTAGCCATAGGGTTT+TGG | 0.308633 | 3.4:-75393799 | MS.gene074420:CDS |
| TCCAAAACCTTCGAAGTTGC+AGG | 0.358974 | 3.4:-75397184 | MS.gene074420:CDS |
| GCGTGGTGTGTATTCGAATT+CGG | 0.370925 | 3.4:+75397150 | None:intergenic |
| ATCTATATTCTGCGGCTTTG+AGG | 0.378929 | 3.4:+75397047 | None:intergenic |
| GAGCTACTTCATCTTCCAAT+TGG | 0.383390 | 3.4:+75396236 | None:intergenic |
| TTTAGCTTTCTTGTGGCAAT+GGG | 0.405983 | 3.4:-75396721 | MS.gene074420:intron |
| CGTGGTGTGTATTCGAATTC+GGG | 0.408134 | 3.4:+75397151 | None:intergenic |
| CGAGGTTAACATATTTGAAA+AGG | 0.410169 | 3.4:-75396603 | MS.gene074420:intron |
| AAAACCCTATGGCTAATCTC+TGG | 0.417355 | 3.4:+75393801 | None:intergenic |
| TCTTCTCGATTATACTAGAA+AGG | 0.427173 | 3.4:-75396632 | MS.gene074420:CDS |
| GTGCAGAACACTAGCCCAAT+TGG | 0.431088 | 3.4:-75396251 | MS.gene074420:intron |
| GTGTATTCGAATTCGGGAAC+GGG | 0.431311 | 3.4:+75397157 | None:intergenic |
| GATTCTGGAGAATGTAGGTT+TGG | 0.441568 | 3.4:-75396914 | MS.gene074420:CDS |
| AGAGAGATTCTGGAGAATGT+AGG | 0.442677 | 3.4:-75396919 | MS.gene074420:CDS |
| GAAATACCGGAGGCAAATCT+TGG | 0.443503 | 3.4:+75393706 | None:intergenic |
| CAATGTGGTTGCGTCGGCGC+AGG | 0.443838 | 3.4:-75396872 | MS.gene074420:CDS |
| AGACCGGTGTGGAGGAGAAA+AGG | 0.446370 | 3.4:-75396681 | MS.gene074420:CDS |
| GGTAACTTCTTAGAGTATCA+AGG | 0.454855 | 3.4:+75393727 | None:intergenic |
| AGCTACTTCATCTTCCAATT+GGG | 0.469118 | 3.4:+75396237 | None:intergenic |
| GAAAAGGGCTAAAGTGCATA+AGG | 0.474248 | 3.4:-75396665 | MS.gene074420:CDS |
| TGTGTATTCGAATTCGGGAA+CGG | 0.481161 | 3.4:+75397156 | None:intergenic |
| TAAGAGATACTGAACTTAGT+AGG | 0.497045 | 3.4:-75396819 | MS.gene074420:intron |
| AAACCCTATGGCTAATCTCT+GGG | 0.498715 | 3.4:+75393802 | None:intergenic |
| AAATAAACTAACCTCATAGT+TGG | 0.499847 | 3.4:+75396132 | None:intergenic |
| GGAGAATGTAGGTTTGGCTC+AGG | 0.504384 | 3.4:-75396908 | MS.gene074420:CDS |
| GATTATCCAGGATAAAGCTC+TGG | 0.506748 | 3.4:-75393597 | MS.gene074420:intron |
| ACCGTCCAATGTGGTTGCGT+CGG | 0.519517 | 3.4:-75396878 | MS.gene074420:CDS |
| GGCTGAGCATAGGAAGGAGC+TGG | 0.522874 | 3.4:-75393769 | MS.gene074420:CDS |
| GACCGGTGTGGAGGAGAAAA+GGG | 0.529132 | 3.4:-75396680 | MS.gene074420:CDS |
| CTGCGCCGACGCAACCACAT+TGG | 0.532875 | 3.4:+75396873 | None:intergenic |
| GCAAGCAGCTCTTCTAAATG+AGG | 0.535611 | 3.4:-75393507 | MS.gene074420:CDS |
| AGCTCCGTGTGAGGCTCAGA+TGG | 0.536186 | 3.4:-75396218 | MS.gene074420:CDS |
| GATATTTCATTGAGGAAGAC+CGG | 0.541804 | 3.4:-75396697 | MS.gene074420:CDS |
| GCAACAATGTGCCAACTATG+AGG | 0.550825 | 3.4:-75396143 | MS.gene074420:intron |
| CTTCTTAGAGTATCAAGGAT+GGG | 0.552403 | 3.4:+75393732 | None:intergenic |
| TACCCCAGAGATTAGCCATA+GGG | 0.553381 | 3.4:-75393805 | MS.gene074420:CDS |
| GGGTTTACCTGCAACTTCGA+AGG | 0.554455 | 3.4:+75397177 | None:intergenic |
| GTGAGGCTCAGATGGAAAGT+TGG | 0.555194 | 3.4:-75396210 | MS.gene074420:CDS |
| CAAGCAGCTCTTCTAAATGA+GGG | 0.558176 | 3.4:-75393506 | MS.gene074420:CDS |
| AGCATAGGAAGGAGCTGGAG+AGG | 0.563485 | 3.4:-75393764 | MS.gene074420:CDS |
| GAATCAGCGAAGTAAAAGAA+TGG | 0.564127 | 3.4:-75397210 | MS.gene074420:CDS |
| CCATGTCAACCAAAACCCTA+TGG | 0.565389 | 3.4:+75393790 | None:intergenic |
| ACCTTGGGATCTATATTCTG+CGG | 0.568417 | 3.4:+75397039 | None:intergenic |
| TGGTTGACATGGCTGAGCAT+AGG | 0.579448 | 3.4:-75393779 | MS.gene074420:CDS |
| GCAGACGAGGCTCAACCGTG+TGG | 0.588667 | 3.4:-75393832 | MS.gene074420:intron |
| AAGTTACCAAGATTTGCCTC+CGG | 0.589613 | 3.4:-75393712 | MS.gene074420:intron |
| GCCGCAGAATATAGATCCCA+AGG | 0.591800 | 3.4:-75397040 | MS.gene074420:intron |
| CTTTCCATCTGAGCCTCACA+CGG | 0.596528 | 3.4:+75396214 | None:intergenic |
| ACTTCTTAGAGTATCAAGGA+TGG | 0.600198 | 3.4:+75393731 | None:intergenic |
| GCCGACGCAACCACATTGGA+CGG | 0.603040 | 3.4:+75396877 | None:intergenic |
| GGAGACTGATGCTTCTTGAT+CGG | 0.607951 | 3.4:+75397246 | None:intergenic |
| ATTGAGGAAGACCGGTGTGG+AGG | 0.608171 | 3.4:-75396689 | MS.gene074420:CDS |
| ATACCCCAGAGATTAGCCAT+AGG | 0.609024 | 3.4:-75393806 | MS.gene074420:CDS |
| CTTTAGAGAGAGTAACGAGA+TGG | 0.609598 | 3.4:+75397110 | None:intergenic |
| GCTGATTCCAGAAACTTCTG+TGG | 0.613746 | 3.4:+75397225 | None:intergenic |
| TGACATGGCTGAGCATAGGA+AGG | 0.617304 | 3.4:-75393775 | MS.gene074420:CDS |
| CAATGGGTGATATTTCATTG+AGG | 0.630300 | 3.4:-75396705 | MS.gene074420:CDS |
| TTCAAGACGCTTCTCAGCAG+CGG | 0.631015 | 3.4:+75393538 | None:intergenic |
| CAGACGAGGCTCAACCGTGT+GGG | 0.631934 | 3.4:-75393831 | MS.gene074420:CDS |
| ATCACGAGCGACGAGACGAG+CGG | 0.645010 | 3.4:+75397075 | None:intergenic |
| GAGCAATTACTTGAATGTGA+TGG | 0.645492 | 3.4:-75396188 | MS.gene074420:CDS |
| TTCATTGAGGAAGACCGGTG+TGG | 0.650963 | 3.4:-75396692 | MS.gene074420:CDS |
| AACCCTATGGCTAATCTCTG+GGG | 0.660250 | 3.4:+75393803 | None:intergenic |
| ATACTAGAAAGGCTATTGCG+AGG | 0.667502 | 3.4:-75396621 | MS.gene074420:CDS |
| GGAGAGTTTACCGTCCAATG+TGG | 0.679839 | 3.4:-75396887 | MS.gene074420:CDS |
| AAGCAGCTCTTCTAAATGAG+GGG | 0.682093 | 3.4:-75393505 | MS.gene074420:CDS |
| AGATGAAGTAGCTCCGTGTG+AGG | 0.688922 | 3.4:-75396227 | MS.gene074420:CDS |
| TCTCTGGGGTATAGCCCACA+CGG | 0.692148 | 3.4:+75393817 | None:intergenic |
| TGCAAGTGAGAGACACTGCG+TGG | 0.791418 | 3.4:+75397133 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGGAAATATTAATTATTTT+AGG | - | chr3.4:75396379-75396398 | MS.gene074420:intron | 10.0% |
| !!! | TATTACTTTTTTATGAAATA+AGG | - | chr3.4:75395789-75395808 | MS.gene074420:intron | 10.0% |
| !!! | TGGAAATATTAATTATTTTA+GGG | - | chr3.4:75396380-75396399 | MS.gene074420:intron | 10.0% |
| !! | GTATATAAATAGGATAAATT+TGG | - | chr3.4:75395294-75395313 | MS.gene074420:intron | 15.0% |
| !! | TATTATTAATGAAATTCTCT+GGG | - | chr3.4:75395412-75395431 | MS.gene074420:intron | 15.0% |
| !!! | AAATGATGATAGTATTTTTT+AGG | - | chr3.4:75395666-75395685 | MS.gene074420:intron | 15.0% |
| !!! | AATGAATTTTATCACAAAAT+TGG | - | chr3.4:75396215-75396234 | MS.gene074420:CDS | 15.0% |
| !!! | ATGAATTTTATCACAAAATT+GGG | - | chr3.4:75396216-75396235 | MS.gene074420:CDS | 15.0% |
| !!! | GCATTGTTATTTTTATATAT+TGG | - | chr3.4:75396864-75396883 | MS.gene074420:CDS | 15.0% |
| !!! | TTTTGTGATAAAATTCATTT+TGG | + | chr3.4:75396214-75396233 | None:intergenic | 15.0% |
| !!! | TTTTGTTATTTCAATATTCT+AGG | + | chr3.4:75394850-75394869 | None:intergenic | 15.0% |
| !! | AAGAATATCATAACATAGAT+TGG | + | chr3.4:75396599-75396618 | None:intergenic | 20.0% |
| !! | AAGATCATCAAACATAAAAA+AGG | - | chr3.4:75395984-75396003 | MS.gene074420:intron | 20.0% |
| !! | AGAATATCATAACATAGATT+GGG | + | chr3.4:75396598-75396617 | None:intergenic | 20.0% |
| !! | AGATCATCAAACATAAAAAA+GGG | - | chr3.4:75395985-75396004 | MS.gene074420:intron | 20.0% |
| !! | ATAAATAGGATAAATTTGGA+TGG | - | chr3.4:75395298-75395317 | MS.gene074420:intron | 20.0% |
| !! | ATTTAGAAAATTTGTGTAGA+AGG | - | chr3.4:75395345-75395364 | MS.gene074420:intron | 20.0% |
| !! | GAGAATTTCATTAATAATAC+TGG | + | chr3.4:75395411-75395430 | None:intergenic | 20.0% |
| !! | GTAAAAATGTAAAATGAATG+TGG | - | chr3.4:75394349-75394368 | MS.gene074420:intron | 20.0% |
| !! | GTATTATTAATGAAATTCTC+TGG | - | chr3.4:75395411-75395430 | MS.gene074420:intron | 20.0% |
| !! | TAGCAATTGAAGATAAAAAA+AGG | - | chr3.4:75397184-75397203 | MS.gene074420:CDS | 20.0% |
| !! | TCTTAATTGAAAACAATTCT+GGG | + | chr3.4:75395237-75395256 | None:intergenic | 20.0% |
| !! | TGAATTTGATGTTAGATAAA+AGG | - | chr3.4:75394723-75394742 | MS.gene074420:intron | 20.0% |
| !! | TTAACATATTTGAAAAGGTA+TGG | - | chr3.4:75394154-75394173 | MS.gene074420:intron | 20.0% |
| !! | TTCTTAATTGAAAACAATTC+TGG | + | chr3.4:75395238-75395257 | None:intergenic | 20.0% |
| !!! | AAAGTTTGAATTTTGGAATT+GGG | - | chr3.4:75394003-75394022 | MS.gene074420:intron | 20.0% |
| !!! | AATTTAATTTGTCCAATCAA+AGG | + | chr3.4:75396307-75396326 | None:intergenic | 20.0% |
| !!! | ACTTGAATTTGACAATTTTA+AGG | + | chr3.4:75395898-75395917 | None:intergenic | 20.0% |
| !!! | ATTTTAGCTGTAATTTTTGT+CGG | - | chr3.4:75395020-75395039 | MS.gene074420:intron | 20.0% |
| !!! | GATTAATACTTGTTAATGTT+CGG | - | chr3.4:75395929-75395948 | MS.gene074420:intron | 20.0% |
| !!! | TAAAGTTTGAATTTTGGAAT+TGG | - | chr3.4:75394002-75394021 | MS.gene074420:intron | 20.0% |
| !!! | TGAATTTTATCACAAAATTG+GGG | - | chr3.4:75396217-75396236 | MS.gene074420:CDS | 20.0% |
| !!! | TGGTTTTGAACTAAAAATTT+AGG | - | chr3.4:75394174-75394193 | MS.gene074420:intron | 20.0% |
| !!! | TTTTTTATCTTCAATTGCTA+AGG | + | chr3.4:75397184-75397203 | None:intergenic | 20.0% |
| ! | AAATAAACTAACCTCATAGT+TGG | + | chr3.4:75394623-75394642 | None:intergenic | 25.0% |
| ! | AATCAAGAAAGAATGAGATT+TGG | - | chr3.4:75395696-75395715 | MS.gene074420:intron | 25.0% |
| ! | ACGGATAACATATTATAAAC+TGG | - | chr3.4:75396815-75396834 | MS.gene074420:intron | 25.0% |
| ! | AGCTGTAAAAATTAATACTG+TGG | - | chr3.4:75394248-75394267 | MS.gene074420:intron | 25.0% |
| ! | ATAATAGATTGTAACACATG+TGG | + | chr3.4:75395772-75395791 | None:intergenic | 25.0% |
| ! | ATCAAGAAAGAATGAGATTT+GGG | - | chr3.4:75395697-75395716 | MS.gene074420:intron | 25.0% |
| ! | ATCATCAAACATAAAAAAGG+GGG | - | chr3.4:75395987-75396006 | MS.gene074420:intron | 25.0% |
| ! | ATGCAATAAAACCAGTTTAA+TGG | + | chr3.4:75394824-75394843 | None:intergenic | 25.0% |
| ! | CAAGAGATATAGTTAGAAAA+AGG | - | chr3.4:75394767-75394786 | MS.gene074420:intron | 25.0% |
| ! | GATCATCAAACATAAAAAAG+GGG | - | chr3.4:75395986-75396005 | MS.gene074420:intron | 25.0% |
| ! | GCATGAAAAATATGAAATAC+CGG | + | chr3.4:75397062-75397081 | None:intergenic | 25.0% |
| ! | TAATAGATTGTAACACATGT+GGG | + | chr3.4:75395771-75395790 | None:intergenic | 25.0% |
| ! | TAGTCAAATTAAAACTGTCT+AGG | + | chr3.4:75394388-75394407 | None:intergenic | 25.0% |
| ! | TCAGTGTCTATCTTATAAAT+GGG | + | chr3.4:75395547-75395566 | None:intergenic | 25.0% |
| ! | TGCAATAAAACCAGTTTAAT+GGG | + | chr3.4:75394823-75394842 | None:intergenic | 25.0% |
| !! | CTGTGTTAAAGTTTGAATTT+TGG | - | chr3.4:75393996-75394015 | MS.gene074420:intron | 25.0% |
| !! | TTTATGTTTGATGATCTTGA+TGG | + | chr3.4:75395982-75396001 | None:intergenic | 25.0% |
| !!! | AGGTTAGTTTATTTGTTTTG+AGG | - | chr3.4:75394629-75394648 | MS.gene074420:intron | 25.0% |
| !!! | CTTTCTATTTGTTTTAGTTC+TGG | - | chr3.4:75397081-75397100 | MS.gene074420:CDS | 25.0% |
| !!! | GGTTAGTTTATTTGTTTTGA+GGG | - | chr3.4:75394630-75394649 | MS.gene074420:intron | 25.0% |
| !!! | GTGATAAAATTCATTTTGGT+AGG | + | chr3.4:75396210-75396229 | None:intergenic | 25.0% |
| !!! | GTTAGTTTATTTGTTTTGAG+GGG | - | chr3.4:75394631-75394650 | MS.gene074420:intron | 25.0% |
| !!! | TAATTATTTTAGGGTCTGTT+CGG | - | chr3.4:75396389-75396408 | MS.gene074420:intron | 25.0% |
| !!! | TTAAGAGAGTCAGTTTTTTT+TGG | + | chr3.4:75396707-75396726 | None:intergenic | 25.0% |
| !!! | TTAGTTTATTTGTTTTGAGG+GGG | - | chr3.4:75394632-75394651 | MS.gene074420:intron | 25.0% |
| !!! | TTTAGCATTGATACATAACT+TGG | - | chr3.4:75394209-75394228 | MS.gene074420:intron | 25.0% |
| AAACTACAATAATGTGCTCA+AGG | - | chr3.4:75394412-75394431 | MS.gene074420:intron | 30.0% | |
| AAAGAATGAGATTTGGGAAT+TGG | - | chr3.4:75395703-75395722 | MS.gene074420:intron | 30.0% | |
| AACTACAATAATGTGCTCAA+GGG | - | chr3.4:75394413-75394432 | MS.gene074420:intron | 30.0% | |
| AAGGAGTAAATTTGATTCTG+AGG | - | chr3.4:75395837-75395856 | MS.gene074420:intron | 30.0% | |
| AATAAGGAAATGTTGTTCAG+TGG | - | chr3.4:75395805-75395824 | MS.gene074420:intron | 30.0% | |
| AATAGATTGTAACACATGTG+GGG | + | chr3.4:75395770-75395789 | None:intergenic | 30.0% | |
| AGAACACATAGAATTGAAGT+GGG | - | chr3.4:75395456-75395475 | MS.gene074420:intron | 30.0% | |
| AGAAGGATGTTAAGTAAATC+AGG | - | chr3.4:75395362-75395381 | MS.gene074420:intron | 30.0% | |
| AGATTTGGGAATTGGAAATT+GGG | - | chr3.4:75395711-75395730 | MS.gene074420:intron | 30.0% | |
| AGGAGTAAATTTGATTCTGA+GGG | - | chr3.4:75395838-75395857 | MS.gene074420:intron | 30.0% | |
| AGTTAGAAAAAGGACAGAAA+AGG | - | chr3.4:75394777-75394796 | MS.gene074420:intron | 30.0% | |
| ATAAGGAAATGTTGTTCAGT+GGG | - | chr3.4:75395806-75395825 | MS.gene074420:intron | 30.0% | |
| ATGTTAGATAAAAGGCTGTA+GGG | - | chr3.4:75394731-75394750 | MS.gene074420:intron | 30.0% | |
| ATGTTCGGTATAAAATTCTC+AGG | - | chr3.4:75395944-75395963 | MS.gene074420:intron | 30.0% | |
| ATTATCACCAATTAGGGTTA+GGG | - | chr3.4:75393751-75393770 | MS.gene074420:CDS | 30.0% | |
| CAAAGACTAAGAGTCAATTT+GGG | + | chr3.4:75396795-75396814 | None:intergenic | 30.0% | |
| CGAGGTTAACATATTTGAAA+AGG | - | chr3.4:75394149-75394168 | MS.gene074420:intron | 30.0% | |
| CTTGAACAAGAGAAACAAAA+AGG | - | chr3.4:75394874-75394893 | MS.gene074420:intron | 30.0% | |
| GGGTAAAAGATCATAAAGTT+TGG | - | chr3.4:75395731-75395750 | MS.gene074420:intron | 30.0% | |
| GTCAGTGTCTATCTTATAAA+TGG | + | chr3.4:75395548-75395567 | None:intergenic | 30.0% | |
| TAAGAGATACTGAACTTAGT+AGG | - | chr3.4:75393933-75393952 | MS.gene074420:intron | 30.0% | |
| TACTATCATCATTTCGTCAA+TGG | + | chr3.4:75395660-75395679 | None:intergenic | 30.0% | |
| TAGAACACATAGAATTGAAG+TGG | - | chr3.4:75395455-75395474 | MS.gene074420:intron | 30.0% | |
| TATCATTCTCTACAAATGAC+AGG | - | chr3.4:75396656-75396675 | MS.gene074420:CDS | 30.0% | |
| TCAAAGACTAAGAGTCAATT+TGG | + | chr3.4:75396796-75396815 | None:intergenic | 30.0% | |
| TCATCAAACATAAAAAAGGG+GGG | - | chr3.4:75395988-75396007 | MS.gene074420:intron | 30.0% | |
| TCTTCTCGATTATACTAGAA+AGG | - | chr3.4:75394120-75394139 | MS.gene074420:intron | 30.0% | |
| TGAAAAATATGAAATACCGG+AGG | + | chr3.4:75397059-75397078 | None:intergenic | 30.0% | |
| TGGAAGAAATTGAAGAATCT+GGG | - | chr3.4:75396458-75396477 | MS.gene074420:intron | 30.0% | |
| TGTAAAATGAATGTGGAACT+TGG | - | chr3.4:75394356-75394375 | MS.gene074420:intron | 30.0% | |
| TTGTTAGGGTAAAGAAATGA+GGG | - | chr3.4:75395186-75395205 | MS.gene074420:intron | 30.0% | |
| TTTCGTATAGCAATTCAGTT+TGG | + | chr3.4:75395058-75395077 | None:intergenic | 30.0% | |
| ! | AATTGACTCTTAGTCTTTGA+CGG | - | chr3.4:75396796-75396815 | MS.gene074420:intron | 30.0% |
| ! | GAGCACATTATTGTAGTTTT+TGG | + | chr3.4:75394411-75394430 | None:intergenic | 30.0% |
| ! | TAACCCTAATTGGTGATAAT+GGG | + | chr3.4:75393751-75393770 | None:intergenic | 30.0% |
| !! | ATAATACTGGCTCTATTCAA+TGG | + | chr3.4:75395398-75395417 | None:intergenic | 30.0% |
| !! | GATCTTGATGGATTAAAGAT+AGG | + | chr3.4:75395970-75395989 | None:intergenic | 30.0% |
| !!! | AATTATTTTAGGGTCTGTTC+GGG | - | chr3.4:75396390-75396409 | MS.gene074420:intron | 30.0% |
| !!! | GGTTTTTTTTAGCTTTCTTG+TGG | - | chr3.4:75394024-75394043 | MS.gene074420:intron | 30.0% |
| !!! | TAGTTTATTTGTTTTGAGGG+GGG | - | chr3.4:75394633-75394652 | MS.gene074420:intron | 30.0% |
| AAAAAGGACAGAAAAGGAAG+CGG | - | chr3.4:75394783-75394802 | MS.gene074420:intron | 35.0% | |
| AACCACAGTATAGAATCTCA+TGG | - | chr3.4:75396360-75396379 | MS.gene074420:intron | 35.0% | |
| AACCTACATTTGCTCAAGAT+TGG | - | chr3.4:75395870-75395889 | MS.gene074420:intron | 35.0% | |
| AATTTGTCCAATCAAAGGTG+AGG | + | chr3.4:75396302-75396321 | None:intergenic | 35.0% | |
| ACTACAATAATGTGCTCAAG+GGG | - | chr3.4:75394414-75394433 | MS.gene074420:intron | 35.0% | |
| ACTCCCATTATCACCAATTA+GGG | - | chr3.4:75393745-75393764 | MS.gene074420:CDS | 35.0% | |
| AGAGAAGCTAAGTAGTTAGA+GGG | - | chr3.4:75395263-75395282 | MS.gene074420:intron | 35.0% | |
| AGATACTGAACTTAGTAGGT+GGG | - | chr3.4:75393937-75393956 | MS.gene074420:intron | 35.0% | |
| AGATTATTCAGAATCTCAGC+AGG | - | chr3.4:75396336-75396355 | MS.gene074420:intron | 35.0% | |
| AGCTACTTCATCTTCCAATT+GGG | + | chr3.4:75394518-75394537 | None:intergenic | 35.0% | |
| AGTCAATTTGGGAGATTGAA+GGG | + | chr3.4:75396784-75396803 | None:intergenic | 35.0% | |
| CAATGGGTGATATTTCATTG+AGG | - | chr3.4:75394047-75394066 | MS.gene074420:intron | 35.0% | |
| CATCAAACATAAAAAAGGGG+GGG | - | chr3.4:75395989-75396008 | MS.gene074420:intron | 35.0% | |
| CATTATCACCAATTAGGGTT+AGG | - | chr3.4:75393750-75393769 | MS.gene074420:CDS | 35.0% | |
| CGATTCATACTAAACTAGTG+AGG | + | chr3.4:75394475-75394494 | None:intergenic | 35.0% | |
| GAAAACAATTCTGGGTAAAC+TGG | + | chr3.4:75395229-75395248 | None:intergenic | 35.0% | |
| GAACTCAAAAAATGTACTGG+AGG | - | chr3.4:75396539-75396558 | MS.gene074420:intron | 35.0% | |
| GAATCAGCGAAGTAAAAGAA+TGG | - | chr3.4:75393542-75393561 | MS.gene074420:CDS | 35.0% | |
| GAGATTTGGGAATTGGAAAT+TGG | - | chr3.4:75395710-75395729 | MS.gene074420:intron | 35.0% | |
| GAGCAATTACTTGAATGTGA+TGG | - | chr3.4:75394564-75394583 | MS.gene074420:intron | 35.0% | |
| GATATTTCATTGAGGAAGAC+CGG | - | chr3.4:75394055-75394074 | MS.gene074420:intron | 35.0% | |
| GATGTTAGATAAAAGGCTGT+AGG | - | chr3.4:75394730-75394749 | MS.gene074420:intron | 35.0% | |
| GGAGGGTCATGTATATAAAT+AGG | - | chr3.4:75395284-75395303 | MS.gene074420:intron | 35.0% | |
| GGATAAATTTGGATGGAAGA+AGG | - | chr3.4:75395305-75395324 | MS.gene074420:intron | 35.0% | |
| GTCTATCTTATAAATGGGAG+AGG | + | chr3.4:75395542-75395561 | None:intergenic | 35.0% | |
| GTGGAAGAAATTGAAGAATC+TGG | - | chr3.4:75396457-75396476 | MS.gene074420:intron | 35.0% | |
| GTTGTTAGGGTAAAGAAATG+AGG | - | chr3.4:75395185-75395204 | MS.gene074420:intron | 35.0% | |
| TAAGGAAATGTTGTTCAGTG+GGG | - | chr3.4:75395807-75395826 | MS.gene074420:intron | 35.0% | |
| TAGAGAAGCTAAGTAGTTAG+AGG | - | chr3.4:75395262-75395281 | MS.gene074420:intron | 35.0% | |
| TATTTCGTAGCATGCAGATT+TGG | + | chr3.4:75396135-75396154 | None:intergenic | 35.0% | |
| TCAAAAAATGTACTGGAGGA+GGG | - | chr3.4:75396543-75396562 | MS.gene074420:intron | 35.0% | |
| TTATCCTGTACCCATTAAAC+TGG | - | chr3.4:75394810-75394829 | MS.gene074420:intron | 35.0% | |
| TTCCATGAGATTCTATACTG+TGG | + | chr3.4:75396365-75396384 | None:intergenic | 35.0% | |
| TTCTATGTGTTCTATCTCAG+CGG | + | chr3.4:75395449-75395468 | None:intergenic | 35.0% | |
| TTCTCTACAAATGACAGGTT+CGG | - | chr3.4:75396661-75396680 | MS.gene074420:CDS | 35.0% | |
| ! | AAAACCAGTTTAATGGGTAC+AGG | + | chr3.4:75394817-75394836 | None:intergenic | 35.0% |
| ! | ACTTCTTAGAGTATCAAGGA+TGG | + | chr3.4:75397024-75397043 | None:intergenic | 35.0% |
| ! | CTAACCCTAATTGGTGATAA+TGG | + | chr3.4:75393752-75393771 | None:intergenic | 35.0% |
| ! | CTGTAATTTTTGTCGGATGA+TGG | - | chr3.4:75395027-75395046 | MS.gene074420:intron | 35.0% |
| ! | CTTCTTAGAGTATCAAGGAT+GGG | + | chr3.4:75397023-75397042 | None:intergenic | 35.0% |
| ! | GGTAACTTCTTAGAGTATCA+AGG | + | chr3.4:75397028-75397047 | None:intergenic | 35.0% |
| !! | GGAGTAGGTGTTATTCAATT+TGG | - | chr3.4:75394654-75394673 | MS.gene074420:intron | 35.0% |
| !! | TTTAGCTTTCTTGTGGCAAT+GGG | - | chr3.4:75394031-75394050 | MS.gene074420:intron | 35.0% |
| !!! | AGAGAGTCAGTTTTTTTTGG+TGG | + | chr3.4:75396704-75396723 | None:intergenic | 35.0% |
| !!! | TTTTAGCTTTCTTGTGGCAA+TGG | - | chr3.4:75394030-75394049 | MS.gene074420:intron | 35.0% |
| AAAACCCTATGGCTAATCTC+TGG | + | chr3.4:75396954-75396973 | None:intergenic | 40.0% | |
| AAACCCTATGGCTAATCTCT+GGG | + | chr3.4:75396953-75396972 | None:intergenic | 40.0% | |
| AAATTGGGGAGTAAACATGC+AGG | - | chr3.4:75396231-75396250 | MS.gene074420:CDS | 40.0% | |
| AAGCAGCTCTTCTAAATGAG+GGG | - | chr3.4:75397247-75397266 | MS.gene074420:CDS | 40.0% | |
| AAGCTAAGTAGTTAGAGGGA+GGG | - | chr3.4:75395267-75395286 | MS.gene074420:intron | 40.0% | |
| AAGGAAATGTTGTTCAGTGG+GGG | - | chr3.4:75395808-75395827 | MS.gene074420:intron | 40.0% | |
| AAGTTACCAAGATTTGCCTC+CGG | - | chr3.4:75397040-75397059 | MS.gene074420:intron | 40.0% | |
| ACAAAAGCCCAGAAGTTTCT+TGG | - | chr3.4:75395589-75395608 | MS.gene074420:intron | 40.0% | |
| ACAATTCTGGGTAAACTGGT+TGG | + | chr3.4:75395225-75395244 | None:intergenic | 40.0% | |
| ACCAATTAGGGTTAGGGTTA+AGG | - | chr3.4:75393757-75393776 | MS.gene074420:CDS | 40.0% | |
| ACCTTAACCCTAACCCTAAT+TGG | + | chr3.4:75393761-75393780 | None:intergenic | 40.0% | |
| ACCTTGGGATCTATATTCTG+CGG | + | chr3.4:75393716-75393735 | None:intergenic | 40.0% | |
| ACTTGTATCATGCAAGACTG+TGG | - | chr3.4:75394961-75394980 | MS.gene074420:intron | 40.0% | |
| AGCCAATCTTGAGCAAATGT+AGG | + | chr3.4:75395875-75395894 | None:intergenic | 40.0% | |
| ATACTAGAAAGGCTATTGCG+AGG | - | chr3.4:75394131-75394150 | MS.gene074420:intron | 40.0% | |
| ATCTATATTCTGCGGCTTTG+AGG | + | chr3.4:75393708-75393727 | None:intergenic | 40.0% | |
| CAAAAGCCCAGAAGTTTCTT+GGG | - | chr3.4:75395590-75395609 | MS.gene074420:intron | 40.0% | |
| CAAGCAGCTCTTCTAAATGA+GGG | - | chr3.4:75397246-75397265 | MS.gene074420:CDS | 40.0% | |
| CACTCCCATTATCACCAATT+AGG | - | chr3.4:75393744-75393763 | MS.gene074420:CDS | 40.0% | |
| CTACAATAATGTGCTCAAGG+GGG | - | chr3.4:75394415-75394434 | MS.gene074420:intron | 40.0% | |
| CTCAAAAAATGTACTGGAGG+AGG | - | chr3.4:75396542-75396561 | MS.gene074420:intron | 40.0% | |
| CTTATAAATGGGAGAGGAAC+AGG | + | chr3.4:75395536-75395555 | None:intergenic | 40.0% | |
| GAAAAGGGCTAAAGTGCATA+AGG | - | chr3.4:75394087-75394106 | MS.gene074420:intron | 40.0% | |
| GAAATTGAAGAATCTGGGAG+AGG | - | chr3.4:75396463-75396482 | MS.gene074420:intron | 40.0% | |
| GAGAAAAAGGAAGGAGAAAG+TGG | - | chr3.4:75396438-75396457 | MS.gene074420:intron | 40.0% | |
| GAGATACTGAACTTAGTAGG+TGG | - | chr3.4:75393936-75393955 | MS.gene074420:intron | 40.0% | |
| GAGCTACTTCATCTTCCAAT+TGG | + | chr3.4:75394519-75394538 | None:intergenic | 40.0% | |
| GAGTCAATTTGGGAGATTGA+AGG | + | chr3.4:75396785-75396804 | None:intergenic | 40.0% | |
| GATTATCCAGGATAAAGCTC+TGG | - | chr3.4:75397155-75397174 | MS.gene074420:CDS | 40.0% | |
| GGGAGTGATTATCTTACCTT+GGG | + | chr3.4:75393731-75393750 | None:intergenic | 40.0% | |
| GGGGAACTCAAAAAATGTAC+TGG | - | chr3.4:75396536-75396555 | MS.gene074420:intron | 40.0% | |
| GTCAATTTGGGAGATTGAAG+GGG | + | chr3.4:75396783-75396802 | None:intergenic | 40.0% | |
| TCCTGGATAATCCAAACACA+CGG | + | chr3.4:75397147-75397166 | None:intergenic | 40.0% | |
| TCTCTACAAATGACAGGTTC+GGG | - | chr3.4:75396662-75396681 | MS.gene074420:CDS | 40.0% | |
| TGAATTGACGATTCCCTTCA+TGG | - | chr3.4:75395160-75395179 | MS.gene074420:intron | 40.0% | |
| TGATAACTCAAAACCCCCTA+CGG | - | chr3.4:75396511-75396530 | MS.gene074420:intron | 40.0% | |
| TGCAAGGATTAGAGAGATTC+TGG | - | chr3.4:75393823-75393842 | MS.gene074420:CDS | 40.0% | |
| TGCAGAATTGACTGTTACCA+TGG | - | chr3.4:75395483-75395502 | MS.gene074420:intron | 40.0% | |
| TGGGAGTGATTATCTTACCT+TGG | + | chr3.4:75393732-75393751 | None:intergenic | 40.0% | |
| TGTGTATTCGAATTCGGGAA+CGG | + | chr3.4:75393599-75393618 | None:intergenic | 40.0% | |
| TTAGGGTTAGGGTTAAGGTT+TGG | - | chr3.4:75393762-75393781 | MS.gene074420:CDS | 40.0% | |
| TTGAGAGCGACACGAAAAAT+GGG | - | chr3.4:75394696-75394715 | MS.gene074420:intron | 40.0% | |
| TTTGAGAGCGACACGAAAAA+TGG | - | chr3.4:75394695-75394714 | MS.gene074420:intron | 40.0% | |
| ! | AATAACATTTGCTGCAGACG+AGG | - | chr3.4:75396907-75396926 | MS.gene074420:CDS | 40.0% |
| ! | AGAGAGATTCTGGAGAATGT+AGG | - | chr3.4:75393833-75393852 | MS.gene074420:intron | 40.0% |
| ! | CTTTAGAGAGAGTAACGAGA+TGG | + | chr3.4:75393645-75393664 | None:intergenic | 40.0% |
| ! | GATTCTGGAGAATGTAGGTT+TGG | - | chr3.4:75393838-75393857 | MS.gene074420:intron | 40.0% |
| ! | GATTTTGCATTGTAGCTGCA+AGG | - | chr3.4:75393807-75393826 | MS.gene074420:CDS | 40.0% |
| ! | TTACATTTTGCCCGTGTGTT+TGG | - | chr3.4:75397133-75397152 | MS.gene074420:CDS | 40.0% |
| !! | ACCATGGTTATCGATTTGAC+AGG | - | chr3.4:75395499-75395518 | MS.gene074420:intron | 40.0% |
| !! | AGAGATTAGCCATAGGGTTT+TGG | - | chr3.4:75396953-75396972 | MS.gene074420:intron | 40.0% |
| !! | CCATGGTTATCGATTTGACA+GGG | - | chr3.4:75395500-75395519 | MS.gene074420:intron | 40.0% |
| !!! | GAGTCAGTTTTTTTTGGTGG+TGG | + | chr3.4:75396701-75396720 | None:intergenic | 40.0% |
| AACCCTATGGCTAATCTCTG+GGG | + | chr3.4:75396952-75396971 | None:intergenic | 45.0% | |
| AATTTGGGAGATTGAAGGGG+AGG | + | chr3.4:75396780-75396799 | None:intergenic | 45.0% | |
| ACACTGCCCAAGAAACTTCT+GGG | + | chr3.4:75395599-75395618 | None:intergenic | 45.0% | |
| ACCCTAACAACCTCCATGAA+GGG | + | chr3.4:75395176-75395195 | None:intergenic | 45.0% | |
| AGGAAATGTTGTTCAGTGGG+GGG | - | chr3.4:75395809-75395828 | MS.gene074420:intron | 45.0% | |
| AGGAGGGGATTAGAGGAAAA+GGG | + | chr3.4:75396748-75396767 | None:intergenic | 45.0% | |
| ATTGAAGAATCTGGGAGAGG+AGG | - | chr3.4:75396466-75396485 | MS.gene074420:intron | 45.0% | |
| ATTGACGATTCCCTTCATGG+AGG | - | chr3.4:75395163-75395182 | MS.gene074420:intron | 45.0% | |
| ATTTGGGAGATTGAAGGGGA+GGG | + | chr3.4:75396779-75396798 | None:intergenic | 45.0% | |
| CATTACGCCTCACCTTTGAT+TGG | - | chr3.4:75396292-75396311 | MS.gene074420:intron | 45.0% | |
| CCATGTCAACCAAAACCCTA+TGG | + | chr3.4:75396965-75396984 | None:intergenic | 45.0% | |
| CCCTGTCAAATCGATAACCA+TGG | + | chr3.4:75395503-75395522 | None:intergenic | 45.0% | |
| CCTGGATAATCCAAACACAC+GGG | + | chr3.4:75397146-75397165 | None:intergenic | 45.0% | |
| CGTGGTGTGTATTCGAATTC+GGG | + | chr3.4:75393604-75393623 | None:intergenic | 45.0% | |
| CTCTACAAATGACAGGTTCG+GGG | - | chr3.4:75396663-75396682 | MS.gene074420:CDS | 45.0% | |
| GAAATACCGGAGGCAAATCT+TGG | + | chr3.4:75397049-75397068 | None:intergenic | 45.0% | |
| GAAGCTAAGTAGTTAGAGGG+AGG | - | chr3.4:75395266-75395285 | MS.gene074420:intron | 45.0% | |
| GAGGGTTTGGAGAAAAAGGA+AGG | - | chr3.4:75396429-75396448 | MS.gene074420:intron | 45.0% | |
| GCAACAATGTGCCAACTATG+AGG | - | chr3.4:75394609-75394628 | MS.gene074420:intron | 45.0% | |
| GCAAGCAGCTCTTCTAAATG+AGG | - | chr3.4:75397245-75397264 | MS.gene074420:CDS | 45.0% | |
| GCGTGGTGTGTATTCGAATT+CGG | + | chr3.4:75393605-75393624 | None:intergenic | 45.0% | |
| GGAGACTGATGCTTCTTGAT+CGG | + | chr3.4:75393509-75393528 | None:intergenic | 45.0% | |
| GTGGTAGATACACTGCAATG+TGG | - | chr3.4:75394980-75394999 | MS.gene074420:intron | 45.0% | |
| GTGTATTCGAATTCGGGAAC+GGG | + | chr3.4:75393598-75393617 | None:intergenic | 45.0% | |
| TAACACATGTGGGGTGATGT+GGG | + | chr3.4:75395761-75395780 | None:intergenic | 45.0% | |
| TACCCTAACAACCTCCATGA+AGG | + | chr3.4:75395177-75395196 | None:intergenic | 45.0% | |
| TCAGTCTCCACAGAAGTTTC+TGG | - | chr3.4:75393520-75393539 | MS.gene074420:CDS | 45.0% | |
| TCCAAAACCTTCGAAGTTGC+AGG | - | chr3.4:75393568-75393587 | MS.gene074420:CDS | 45.0% | |
| TCCCTTCATGGAGGTTGTTA+GGG | - | chr3.4:75395172-75395191 | MS.gene074420:intron | 45.0% | |
| TTCCCTTCATGGAGGTTGTT+AGG | - | chr3.4:75395171-75395190 | MS.gene074420:intron | 45.0% | |
| TTGAAGAATCTGGGAGAGGA+GGG | - | chr3.4:75396467-75396486 | MS.gene074420:intron | 45.0% | |
| ! | AATGTACTGGAGGAGGGTTT+TGG | - | chr3.4:75396549-75396568 | MS.gene074420:intron | 45.0% |
| ! | ACCTGCAACTTCGAAGGTTT+TGG | + | chr3.4:75393572-75393591 | None:intergenic | 45.0% |
| ! | ATACCCCAGAGATTAGCCAT+AGG | - | chr3.4:75396946-75396965 | MS.gene074420:intron | 45.0% |
| ! | ATGTACTGGAGGAGGGTTTT+GGG | - | chr3.4:75396550-75396569 | MS.gene074420:intron | 45.0% |
| ! | GCTGATTCCAGAAACTTCTG+TGG | + | chr3.4:75393530-75393549 | None:intergenic | 45.0% |
| ! | TACCCCAGAGATTAGCCATA+GGG | - | chr3.4:75396947-75396966 | MS.gene074420:intron | 45.0% |
| !!! | AGTTTTTTTTGGTGGTGGCC+GGG | + | chr3.4:75396696-75396715 | None:intergenic | 45.0% |
| !!! | ATTTGTTTTGAGGGGGGAGT+AGG | - | chr3.4:75394639-75394658 | MS.gene074420:intron | 45.0% |
| !!! | CAGTTTTTTTTGGTGGTGGC+CGG | + | chr3.4:75396697-75396716 | None:intergenic | 45.0% |
| !!! | CCATAGGGTTTTGGTTGACA+TGG | - | chr3.4:75396962-75396981 | MS.gene074420:intron | 45.0% |
| !!! | TTTTGAGTTCCCCTACCGTA+GGG | + | chr3.4:75396529-75396548 | None:intergenic | 45.0% |
| !!! | TTTTTGAGTTCCCCTACCGT+AGG | + | chr3.4:75396530-75396549 | None:intergenic | 45.0% |
| AACTCAAAACCCCCTACGGT+AGG | - | chr3.4:75396515-75396534 | MS.gene074420:intron | 50.0% | |
| ACTCAAAACCCCCTACGGTA+GGG | - | chr3.4:75396516-75396535 | MS.gene074420:intron | 50.0% | |
| AGATGAAGTAGCTCCGTGTG+AGG | - | chr3.4:75394525-75394544 | MS.gene074420:intron | 50.0% | |
| AGGGGAGGGTTTGGAGAAAA+AGG | - | chr3.4:75396425-75396444 | MS.gene074420:intron | 50.0% | |
| CCCGTGTGTTTGGATTATCC+AGG | - | chr3.4:75397143-75397162 | MS.gene074420:CDS | 50.0% | |
| CTTTCCATCTGAGCCTCACA+CGG | + | chr3.4:75394541-75394560 | None:intergenic | 50.0% | |
| GACACTGCCCAAGAAACTTC+TGG | + | chr3.4:75395600-75395619 | None:intergenic | 50.0% | |
| GAGGAGGGGATTAGAGGAAA+AGG | + | chr3.4:75396749-75396768 | None:intergenic | 50.0% | |
| GCCGCAGAATATAGATCCCA+AGG | - | chr3.4:75393712-75393731 | MS.gene074420:intron | 50.0% | |
| GGAGAGTTTACCGTCCAATG+TGG | - | chr3.4:75393865-75393884 | MS.gene074420:intron | 50.0% | |
| GGGTTTACCTGCAACTTCGA+AGG | + | chr3.4:75393578-75393597 | None:intergenic | 50.0% | |
| GTAACACATGTGGGGTGATG+TGG | + | chr3.4:75395762-75395781 | None:intergenic | 50.0% | |
| GTGAGGCTCAGATGGAAAGT+TGG | - | chr3.4:75394542-75394561 | MS.gene074420:intron | 50.0% | |
| GTGCAGAACACTAGCCCAAT+TGG | - | chr3.4:75394501-75394520 | MS.gene074420:intron | 50.0% | |
| TGACATGGCTGAGCATAGGA+AGG | - | chr3.4:75396977-75396996 | MS.gene074420:intron | 50.0% | |
| TGGTTGACATGGCTGAGCAT+AGG | - | chr3.4:75396973-75396992 | MS.gene074420:intron | 50.0% | |
| TTAGGGTCTGTTCGGGAGAT+TGG | - | chr3.4:75396397-75396416 | MS.gene074420:intron | 50.0% | |
| TTCAAGACGCTTCTCAGCAG+CGG | + | chr3.4:75397217-75397236 | None:intergenic | 50.0% | |
| TTCATTGAGGAAGACCGGTG+TGG | - | chr3.4:75394060-75394079 | MS.gene074420:intron | 50.0% | |
| TTTGGGAGATTGAAGGGGAG+GGG | + | chr3.4:75396778-75396797 | None:intergenic | 50.0% | |
| ! | GGAGAATGTAGGTTTGGCTC+AGG | - | chr3.4:75393844-75393863 | MS.gene074420:intron | 50.0% |
| ! | TTTGAGTTCCCCTACCGTAG+GGG | + | chr3.4:75396528-75396547 | None:intergenic | 50.0% |
| !!! | GTTTTTTTTGGTGGTGGCCG+GGG | + | chr3.4:75396695-75396714 | None:intergenic | 50.0% |
| ACAGGAGAGGAGGGGATTAG+AGG | + | chr3.4:75396755-75396774 | None:intergenic | 55.0% | |
| ACCGTCCAATGTGGTTGCGT+CGG | - | chr3.4:75393874-75393893 | MS.gene074420:intron | 55.0% | |
| AGACCGGTGTGGAGGAGAAA+AGG | - | chr3.4:75394071-75394090 | MS.gene074420:intron | 55.0% | |
| AGCATAGGAAGGAGCTGGAG+AGG | - | chr3.4:75396988-75397007 | MS.gene074420:intron | 55.0% | |
| ATCTGGGAGAGGAGGGCTTT+AGG | - | chr3.4:75396474-75396493 | MS.gene074420:intron | 55.0% | |
| ATTGAGGAAGACCGGTGTGG+AGG | - | chr3.4:75394063-75394082 | MS.gene074420:intron | 55.0% | |
| CTCAAAACCCCCTACGGTAG+GGG | - | chr3.4:75396517-75396536 | MS.gene074420:intron | 55.0% | |
| GACCGGTGTGGAGGAGAAAA+GGG | - | chr3.4:75394072-75394091 | MS.gene074420:intron | 55.0% | |
| GGTCTGTTCGGGAGATTGGA+GGG | - | chr3.4:75396401-75396420 | MS.gene074420:intron | 55.0% | |
| GTCTGTTCGGGAGATTGGAG+GGG | - | chr3.4:75396402-75396421 | MS.gene074420:intron | 55.0% | |
| TCTGGGAGAGGAGGGCTTTA+GGG | - | chr3.4:75396475-75396494 | MS.gene074420:intron | 55.0% | |
| TGCAAGTGAGAGACACTGCG+TGG | + | chr3.4:75393622-75393641 | None:intergenic | 55.0% | |
| TGTTCAGTGGGGGGATTGCA+AGG | - | chr3.4:75395818-75395837 | MS.gene074420:intron | 55.0% | |
| TTGAGTTCCCCTACCGTAGG+GGG | + | chr3.4:75396527-75396546 | None:intergenic | 55.0% | |
| ! | AGCCCTTTTCTCCTCCACAC+CGG | + | chr3.4:75394077-75394096 | None:intergenic | 55.0% |
| ! | AGGCAGCCAGAGCTTTATCC+TGG | + | chr3.4:75397164-75397183 | None:intergenic | 55.0% |
| ! | CAAGGGGGACAGAGAGCTTT+TGG | - | chr3.4:75394430-75394449 | MS.gene074420:intron | 55.0% |
| !! | TCTCTGGGGTATAGCCCACA+CGG | + | chr3.4:75396938-75396957 | None:intergenic | 55.0% |
| !!! | TACTGGAGGAGGGTTTTGGG+AGG | - | chr3.4:75396553-75396572 | MS.gene074420:intron | 55.0% |
| AGCTCCGTGTGAGGCTCAGA+TGG | - | chr3.4:75394534-75394553 | MS.gene074420:intron | 60.0% | |
| ATCACGAGCGACGAGACGAG+CGG | + | chr3.4:75393680-75393699 | None:intergenic | 60.0% | |
| CAGACGAGGCTCAACCGTGT+GGG | - | chr3.4:75396921-75396940 | MS.gene074420:CDS | 60.0% | |
| GAGACGAGCGGCTTCGTCTT+TGG | + | chr3.4:75393668-75393687 | None:intergenic | 60.0% | |
| GAGATTGAAGGGGAGGGGAC+AGG | + | chr3.4:75396773-75396792 | None:intergenic | 60.0% | |
| GCCGACGCAACCACATTGGA+CGG | + | chr3.4:75393878-75393897 | None:intergenic | 60.0% | |
| GGCTGAGCATAGGAAGGAGC+TGG | - | chr3.4:75396983-75397002 | MS.gene074420:intron | 60.0% | |
| GGGTCTGTTCGGGAGATTGG+AGG | - | chr3.4:75396400-75396419 | MS.gene074420:intron | 60.0% | |
| GTTCGGGAGATTGGAGGGGA+GGG | - | chr3.4:75396406-75396425 | MS.gene074420:intron | 60.0% | |
| TGTTCGGGAGATTGGAGGGG+AGG | - | chr3.4:75396405-75396424 | MS.gene074420:intron | 60.0% | |
| TTCGGGAGATTGGAGGGGAG+GGG | - | chr3.4:75396407-75396426 | MS.gene074420:intron | 60.0% | |
| ! | CTGGGAGAGGAGGGCTTTAG+GGG | - | chr3.4:75396476-75396495 | MS.gene074420:intron | 60.0% |
| CAGGTTCGGGGTTCGAACCC+CGG | - | chr3.4:75396675-75396694 | MS.gene074420:CDS | 65.0% | |
| GCAGACGAGGCTCAACCGTG+TGG | - | chr3.4:75396920-75396939 | MS.gene074420:CDS | 65.0% | |
| GGAGATTGGAGGGGAGGGGA+GGG | - | chr3.4:75396411-75396430 | MS.gene074420:intron | 65.0% | |
| TGAAGGGGAGGGGACAGGAG+AGG | + | chr3.4:75396768-75396787 | None:intergenic | 65.0% | |
| TTGGAGGGGAGGGGAGGGTT+TGG | - | chr3.4:75396416-75396435 | MS.gene074420:intron | 65.0% | |
| ! | CAATGTGGTTGCGTCGGCGC+AGG | - | chr3.4:75393880-75393899 | MS.gene074420:intron | 65.0% |
| ! | CTGCGCCGACGCAACCACAT+TGG | + | chr3.4:75393882-75393901 | None:intergenic | 65.0% |
| AGGGGAGGGGACAGGAGAGG+AGG | + | chr3.4:75396765-75396784 | None:intergenic | 70.0% | |
| GGGAGATTGGAGGGGAGGGG+AGG | - | chr3.4:75396410-75396429 | MS.gene074420:intron | 70.0% | |
| GGGAGGGGACAGGAGAGGAG+GGG | + | chr3.4:75396763-75396782 | None:intergenic | 70.0% | |
| GGGGAGGGGACAGGAGAGGA+GGG | + | chr3.4:75396764-75396783 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 75393502 | 75397272 | 75393502 | ID=MS.gene074420 |
| chr3.4 | mRNA | 75393502 | 75397272 | 75393502 | ID=MS.gene074420.t1;Parent=MS.gene074420 |
| chr3.4 | exon | 75397041 | 75397272 | 75397041 | ID=MS.gene074420.t1.exon1;Parent=MS.gene074420.t1 |
| chr3.4 | CDS | 75397041 | 75397272 | 75397041 | ID=cds.MS.gene074420.t1;Parent=MS.gene074420.t1 |
| chr3.4 | exon | 75396820 | 75396952 | 75396820 | ID=MS.gene074420.t1.exon2;Parent=MS.gene074420.t1 |
| chr3.4 | CDS | 75396820 | 75396952 | 75396820 | ID=cds.MS.gene074420.t1;Parent=MS.gene074420.t1 |
| chr3.4 | exon | 75396604 | 75396738 | 75396604 | ID=MS.gene074420.t1.exon3;Parent=MS.gene074420.t1 |
| chr3.4 | CDS | 75396604 | 75396738 | 75396604 | ID=cds.MS.gene074420.t1;Parent=MS.gene074420.t1 |
| chr3.4 | exon | 75396144 | 75396267 | 75396144 | ID=MS.gene074420.t1.exon4;Parent=MS.gene074420.t1 |
| chr3.4 | CDS | 75396144 | 75396267 | 75396144 | ID=cds.MS.gene074420.t1;Parent=MS.gene074420.t1 |
| chr3.4 | exon | 75393713 | 75393850 | 75393713 | ID=MS.gene074420.t1.exon5;Parent=MS.gene074420.t1 |
| chr3.4 | CDS | 75393713 | 75393850 | 75393713 | ID=cds.MS.gene074420.t1;Parent=MS.gene074420.t1 |
| chr3.4 | exon | 75393502 | 75393609 | 75393502 | ID=MS.gene074420.t1.exon6;Parent=MS.gene074420.t1 |
| chr3.4 | CDS | 75393502 | 75393609 | 75393502 | ID=cds.MS.gene074420.t1;Parent=MS.gene074420.t1 |
| Gene Sequence |
| Protein sequence |
