AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene07618

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07618.t1 MTR_7g108290 98.331 599 9 1 1 598 1 599 0.0 1208
MS.gene07618.t1 MTR_1g088885 76.837 626 131 6 1 623 1 615 0.0 989
MS.gene07618.t1 MTR_4g022330 47.924 578 277 10 30 600 28 588 1.02e-179 523
MS.gene07618.t1 MTR_7g073980 44.034 595 289 11 34 615 31 594 1.50e-162 480
MS.gene07618.t1 MTR_5g016060 40.287 628 317 13 22 617 25 626 1.31e-150 449
MS.gene07618.t1 MTR_4g095430 39.701 602 314 16 25 602 1 577 4.98e-137 413
MS.gene07618.t1 MTR_3g062540 35.364 591 307 12 20 593 7 539 6.36e-117 360
MS.gene07618.t1 MTR_5g016060 37.918 538 277 12 111 617 1 512 5.17e-112 345
MS.gene07618.t1 MTR_3g062540 35.560 554 283 11 56 593 2 497 1.09e-108 337
MS.gene07618.t1 MTR_2g009340 31.373 663 384 12 13 619 20 667 2.29e-107 339
MS.gene07618.t1 MTR_2g084595 35.034 588 334 12 34 590 21 591 4.10e-107 337
MS.gene07618.t1 MTR_5g075640 33.773 607 305 11 20 594 8 549 8.19e-107 334
MS.gene07618.t1 MTR_8g078900 35.559 599 311 12 38 575 22 606 8.53e-107 337
MS.gene07618.t1 MTR_4g093850 33.120 625 347 15 31 602 38 644 3.53e-106 335
MS.gene07618.t1 MTR_8g078900 35.484 589 305 12 48 575 2 576 4.35e-105 331
MS.gene07618.t1 MTR_8g078900 36.364 539 288 10 78 575 42 566 6.68e-100 317
MS.gene07618.t1 MTR_8g090220 33.387 617 308 15 36 604 52 613 3.67e-99 316
MS.gene07618.t1 MTR_1g094850 34.035 570 337 12 38 590 28 575 4.11e-98 312
MS.gene07618.t1 MTR_2g018750 34.570 593 340 14 20 590 9 575 3.78e-97 310
MS.gene07618.t1 MTR_5g075640 33.509 570 283 10 56 594 2 506 9.65e-97 306
MS.gene07618.t1 MTR_8g090220 36.345 498 246 10 36 499 52 512 5.13e-96 304
MS.gene07618.t1 MTR_1g064360 35.081 553 307 13 26 556 15 537 7.53e-96 305
MS.gene07618.t1 MTR_5g032780 37.618 529 275 12 18 506 12 525 4.54e-89 290
MS.gene07618.t1 MTR_2g048390 35.920 451 249 8 26 448 15 453 2.55e-86 277
MS.gene07618.t1 MTR_1g106430 34.451 537 322 11 34 556 26 546 6.27e-86 281
MS.gene07618.t1 MTR_5g015790 36.157 484 265 11 34 498 25 483 1.11e-85 280
MS.gene07618.t1 MTR_4g134210 33.155 561 309 12 27 566 17 532 1.10e-80 266
MS.gene07618.t1 MTR_1g014070 34.105 475 290 9 34 497 25 487 2.23e-80 266
MS.gene07618.t1 MTR_4g093850 33.881 487 258 11 26 462 33 505 2.33e-79 261
MS.gene07618.t1 MTR_8g069330 33.276 583 331 16 39 587 29 587 1.80e-77 258
MS.gene07618.t1 MTR_8g078900 35.011 457 237 8 38 448 22 464 1.75e-76 251
MS.gene07618.t1 MTR_2g084595 33.710 442 250 9 34 448 21 446 9.76e-72 238
MS.gene07618.t1 MTR_8g078900 36.272 397 213 6 78 448 42 424 9.13e-70 232
MS.gene07618.t1 MTR_2g027410 31.959 485 277 10 27 496 17 463 3.51e-66 227
MS.gene07618.t1 MTR_1g082690 27.406 478 286 7 37 503 59 486 1.08e-64 222
MS.gene07618.t1 MTR_4g011530 33.333 441 240 12 189 616 18 417 3.94e-62 213
MS.gene07618.t1 MTR_2g102730 36.240 367 182 8 213 563 24 354 2.26e-58 202
MS.gene07618.t1 MTR_2g027410 31.002 429 243 10 83 496 1 391 4.94e-53 189
MS.gene07618.t1 MTR_4g045767 25.397 567 368 13 45 593 14 543 5.24e-42 160
MS.gene07618.t1 MTR_1g105870 37.900 219 114 4 43 259 38 236 1.16e-41 152
MS.gene07618.t1 MTR_4g074190 26.337 505 289 14 37 499 4 467 7.30e-41 156
MS.gene07618.t1 MTR_4g074190 26.652 454 254 12 84 499 9 421 3.50e-38 148
MS.gene07618.t1 MTR_4g074190 25.052 479 276 14 37 473 4 441 6.34e-32 129
MS.gene07618.t1 MTR_1g035720 27.682 289 148 6 296 575 286 522 9.63e-27 115
MS.gene07618.t1 MTR_2g010890 25.225 444 254 11 102 518 1 393 3.37e-26 112
MS.gene07618.t1 MTR_2g048375 40.580 138 75 3 464 601 1 131 6.14e-21 90.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07618.t1 AT1G03010 68.701 639 173 9 1 623 1 628 0.0 855
MS.gene07618.t1 AT1G03010 68.914 608 162 9 32 623 31 627 0.0 807
MS.gene07618.t1 AT1G03010 68.914 608 162 9 32 623 5 601 0.0 807
MS.gene07618.t1 AT2G47860 60.870 644 216 12 1 623 1 629 0.0 730
MS.gene07618.t1 AT2G47860 58.771 667 216 13 1 623 1 652 0.0 717
MS.gene07618.t1 AT2G47860 60.421 523 175 10 121 623 1 511 0.0 570
MS.gene07618.t1 AT2G47860 60.421 523 175 10 121 623 1 511 0.0 570
MS.gene07618.t1 AT2G47860 61.269 457 155 7 1 448 1 444 0.0 531
MS.gene07618.t1 AT2G47860 58.333 480 155 8 1 448 1 467 3.13e-180 519
MS.gene07618.t1 AT5G48800 46.540 578 278 8 23 594 28 580 7.97e-175 510
MS.gene07618.t1 AT5G67385 40.129 618 320 13 22 617 10 599 6.00e-141 423
MS.gene07618.t1 AT3G08570 43.038 553 282 11 34 575 32 562 1.30e-140 423
MS.gene07618.t1 AT3G08660 40.842 546 276 11 34 575 32 534 1.21e-133 404
MS.gene07618.t1 AT5G67385 39.347 582 304 12 57 617 1 554 2.15e-126 384
MS.gene07618.t1 AT5G67385 39.347 582 304 12 57 617 1 554 2.15e-126 384
MS.gene07618.t1 AT5G67385 39.347 582 304 12 57 617 1 554 2.15e-126 384
MS.gene07618.t1 AT5G67385 39.347 582 304 12 57 617 1 554 2.15e-126 384
MS.gene07618.t1 AT3G08660 40.232 517 262 11 63 575 1 474 2.08e-121 370
MS.gene07618.t1 AT1G30440 35.434 587 327 12 26 575 15 586 1.32e-111 349
MS.gene07618.t1 AT5G03250 35.593 590 324 13 26 590 15 573 2.74e-106 333
MS.gene07618.t1 AT2G30520 33.445 595 326 13 22 594 15 561 1.82e-105 331
MS.gene07618.t1 AT5G13600 36.538 572 297 16 39 583 29 561 3.58e-101 320
MS.gene07618.t1 AT3G49970 33.786 589 287 15 48 617 6 510 3.79e-98 310
MS.gene07618.t1 AT3G49970 33.786 589 287 15 48 617 6 510 3.79e-98 310
MS.gene07618.t1 AT2G30520 33.036 560 306 12 56 594 2 513 6.74e-95 302
MS.gene07618.t1 AT2G30520 33.036 560 306 12 56 594 2 513 6.74e-95 302
MS.gene07618.t1 AT3G44820 31.940 598 333 11 26 575 12 583 4.20e-94 303
MS.gene07618.t1 AT5G66560 32.039 618 322 9 38 575 21 620 3.58e-92 298
MS.gene07618.t1 AT5G66560 31.908 608 316 9 48 575 2 591 4.36e-90 292
MS.gene07618.t1 AT2G14820 34.375 544 320 13 34 558 25 550 1.41e-89 291
MS.gene07618.t1 AT2G14820 34.375 544 320 13 34 558 25 550 1.41e-89 291
MS.gene07618.t1 AT5G66560 33.582 536 302 7 76 575 64 581 2.56e-88 287
MS.gene07618.t1 AT3G50840 33.333 573 310 10 22 575 2 521 2.60e-88 286
MS.gene07618.t1 AT3G08660 37.915 422 224 9 34 451 32 419 1.93e-87 279
MS.gene07618.t1 AT5G10250 32.184 609 311 16 31 598 44 591 2.35e-87 285
MS.gene07618.t1 AT5G10250 31.886 599 311 15 31 598 44 576 2.94e-84 276
MS.gene07618.t1 AT5G67440 36.059 477 268 10 34 498 25 476 3.49e-84 275
MS.gene07618.t1 AT5G67440 36.059 477 268 10 34 498 25 476 3.49e-84 275
MS.gene07618.t1 AT1G67900 36.276 521 287 11 18 507 12 518 7.09e-84 276
MS.gene07618.t1 AT1G67900 36.276 521 287 11 18 507 12 518 7.09e-84 276
MS.gene07618.t1 AT1G67900 36.276 521 287 11 18 507 12 518 7.09e-84 276
MS.gene07618.t1 AT1G67900 36.276 521 287 11 18 507 12 518 7.09e-84 276
MS.gene07618.t1 AT1G67900 36.276 521 287 11 18 507 12 518 7.09e-84 276
MS.gene07618.t1 AT1G67900 36.276 521 287 11 18 507 12 518 7.09e-84 276
MS.gene07618.t1 AT4G31820 35.404 483 265 11 29 498 20 468 2.42e-82 270
MS.gene07618.t1 AT5G67440 36.304 460 256 10 51 498 5 439 7.67e-80 263
MS.gene07618.t1 AT3G50840 33.086 538 288 10 57 575 1 485 7.88e-80 262
MS.gene07618.t1 AT3G50840 33.086 538 288 10 57 575 1 485 7.88e-80 262
MS.gene07618.t1 AT4G37590 32.165 485 271 11 34 501 25 468 1.62e-77 257
MS.gene07618.t1 AT5G03250 34.350 492 270 11 121 590 1 461 2.45e-77 254
MS.gene07618.t1 AT3G26490 35.441 522 270 14 18 498 12 507 1.06e-75 253
MS.gene07618.t1 AT3G26490 35.441 522 270 14 18 498 12 507 1.06e-75 253
MS.gene07618.t1 AT3G26490 35.441 522 270 14 18 498 12 507 1.06e-75 253
MS.gene07618.t1 AT2G23050 32.454 493 268 12 24 505 19 457 2.18e-74 246
MS.gene07618.t1 AT5G47800 32.700 474 287 9 33 496 23 474 2.22e-74 248
MS.gene07618.t1 AT5G47800 32.700 474 287 9 33 496 23 474 2.22e-74 248
MS.gene07618.t1 AT5G47800 32.700 474 287 9 33 496 23 474 2.22e-74 248
MS.gene07618.t1 AT5G47800 32.700 474 287 9 33 496 136 587 2.31e-73 249
MS.gene07618.t1 AT4G31820 34.076 449 249 11 63 498 1 415 6.97e-68 230
MS.gene07618.t1 AT5G66560 31.590 478 242 8 38 448 21 480 6.99e-64 218
MS.gene07618.t1 AT3G26490 33.617 470 259 13 18 453 12 462 4.34e-58 203
MS.gene07618.t1 AT1G52770 34.430 395 209 7 197 575 17 377 6.10e-58 202
MS.gene07618.t1 AT5G64330 34.384 349 202 8 269 596 371 713 6.35e-52 191
MS.gene07618.t1 AT5G64330 34.677 248 135 3 34 256 50 295 5.53e-41 159
MS.gene07618.t1 AT2G23050 32.564 390 209 10 121 505 1 341 1.04e-50 180
MS.gene07618.t1 AT5G64330 41.224 245 129 4 269 503 312 551 3.59e-49 181
MS.gene07618.t1 AT5G64330 34.061 229 124 3 53 256 10 236 4.86e-35 140
MS.gene07618.t1 AT3G15570 36.913 298 142 5 222 499 38 309 5.59e-49 177
MS.gene07618.t1 AT3G19850 25.202 496 303 9 36 497 3 464 6.42e-49 179
MS.gene07618.t1 AT5G64330 41.224 245 129 4 269 503 371 610 7.87e-49 181
MS.gene07618.t1 AT5G64330 34.553 246 138 2 34 256 50 295 2.93e-41 159
MS.gene07618.t1 AT3G22104 29.032 465 265 11 36 483 4 420 2.60e-45 168
MS.gene07618.t1 AT1G50280 25.000 488 309 10 32 492 3 460 1.25e-44 167
MS.gene07618.t1 AT5G48130 27.096 513 292 14 42 534 45 495 1.75e-44 168
MS.gene07618.t1 AT1G50280 24.943 441 282 8 74 492 14 427 1.17e-42 160
MS.gene07618.t1 AT5G17580 27.789 475 300 10 38 503 7 447 1.83e-39 152
MS.gene07618.t1 AT5G17580 27.368 475 302 9 38 503 22 462 1.89e-39 153
MS.gene07618.t1 AT3G03510 28.673 422 226 12 90 501 8 364 1.62e-38 148
MS.gene07618.t1 AT3G22104 28.133 391 219 8 107 483 3 345 1.18e-34 137
MS.gene07618.t1 AT3G22104 28.133 391 219 8 107 483 3 345 1.18e-34 137
MS.gene07618.t1 AT3G22104 28.133 391 219 8 107 483 3 345 1.18e-34 137

Find 106 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTAGTTTCCTCTTGTTTCT+AGG 0.091654 7.1:+5646357 MS.gene07618:intron
CACCAATCTAAGGGTGTTTC+TGG 0.142169 7.1:-5646818 None:intergenic
GAGAAAATTGTCAAGTAATT+TGG 0.180360 7.1:-5647398 None:intergenic
GAATTGAAGCCTAGTGTTTC+AGG 0.216646 7.1:+5644759 MS.gene07618:CDS
TTTCTAGGAGTGGAAGATTT+AGG 0.247375 7.1:+5646372 MS.gene07618:CDS
TTCTTTACTACGAACAAATA+AGG 0.259310 7.1:+5647998 MS.gene07618:CDS
AGAATTCTCAGAAAAGAATT+TGG 0.264671 7.1:+5646571 MS.gene07618:CDS
AGAGTTGATCAGCAAAATTT+TGG 0.272364 7.1:+5646919 MS.gene07618:CDS
AACTTCTTGTAGAAGTGATT+TGG 0.280903 7.1:+5647129 MS.gene07618:CDS
ATCTTGTTTGGTGGTATTCA+TGG 0.287931 7.1:+5648054 MS.gene07618:CDS
AAGATATCAACCTTGTTAAT+AGG 0.326340 7.1:+5646693 MS.gene07618:CDS
ATTTACCTTGTGAAGTGAAT+AGG 0.350440 7.1:-5645836 None:intergenic
AGAGTTTCCCCACCAATCTA+AGG 0.353136 7.1:-5646828 None:intergenic
GAGAATGAGGTTGAATGATT+TGG 0.354022 7.1:+5648191 MS.gene07618:CDS
AGTATTCGTGGCAGTGGAAC+TGG 0.358592 7.1:+5648327 MS.gene07618:CDS
AGCTGTTGACATCTTCCTTA+AGG 0.360096 7.1:+5647522 MS.gene07618:CDS
TTAAGAATTGAGCTTTGCTT+TGG 0.368579 7.1:-5647370 None:intergenic
TTCTAAAACATTATCAATGA+TGG 0.372684 7.1:+5646793 MS.gene07618:CDS
TGTATAATGTTCGATGTGTT+TGG 0.373596 7.1:-5646632 None:intergenic
CAAAGATCAGGGAGTGGTAT+AGG 0.379986 7.1:+5648087 MS.gene07618:CDS
GGACACAATCAAATCTTGTT+TGG 0.395537 7.1:+5648042 MS.gene07618:CDS
AAACATGAAAGAAATGCTAT+TGG 0.398126 7.1:-5647076 None:intergenic
TTTCTTCGAACGAGTTATAT+CGG 0.401205 7.1:+5646871 MS.gene07618:CDS
ATAGGTTCATCCGAACATTA+AGG 0.402802 7.1:+5647864 MS.gene07618:intron
GAAAGGCTACCAGTTCAAAT+AGG 0.406258 7.1:+5647967 MS.gene07618:CDS
TGCAAAGAGCAACTAACTTC+TGG 0.410485 7.1:+5646743 MS.gene07618:CDS
GGTCAATTTCCTCAAAGATC+AGG 0.415797 7.1:+5648075 MS.gene07618:CDS
AAAGCAAAGCTCAATTCTTA+AGG 0.417656 7.1:+5647372 MS.gene07618:CDS
GAGCTTTGCTTTGGAGATCC+AGG 0.425100 7.1:-5647361 None:intergenic
AGGTTGATATCTTCTGATAA+AGG 0.430627 7.1:-5646683 None:intergenic
AGCACTTGCAGAACTACTTC+CGG 0.434035 7.1:+5647465 MS.gene07618:CDS
ATACCACTCCCTGATCTTTG+AGG 0.435450 7.1:-5648084 None:intergenic
TATGCACATAATTCTCTTCA+AGG 0.435685 7.1:+5646947 MS.gene07618:CDS
TCACTGGAGACATCAGATAT+TGG 0.444897 7.1:-5645787 None:intergenic
GCTTACTACCAACTCAATCT+AGG 0.447056 7.1:+5647041 MS.gene07618:CDS
GTATAATGTTCGATGTGTTT+GGG 0.449390 7.1:-5646631 None:intergenic
ACTTGTACACCTATTTGAAC+TGG 0.460924 7.1:-5647976 None:intergenic
CGCTCCGAGTCCTTAATGTT+CGG 0.462622 7.1:-5647874 None:intergenic
TTCCGTATTCACAGTATTCG+TGG 0.463092 7.1:+5648315 MS.gene07618:CDS
AGGCTTCGAAATGCGATGAA+TGG 0.467453 7.1:+5648018 MS.gene07618:CDS
TTTCCTCTTGTTTCTAGGAG+TGG 0.473410 7.1:+5646362 MS.gene07618:CDS
TCAGGGAGTGGTATAGGAAG+TGG 0.474984 7.1:+5648093 MS.gene07618:CDS
AGCCTAGTGTTTCAGGAAGA+AGG 0.476944 7.1:+5644766 MS.gene07618:CDS
GGAAACCGGGACCGTGGTTG+TGG 0.476979 7.1:-5648360 None:intergenic
TGCCACGAATACTGTGAATA+CGG 0.478137 7.1:-5648317 None:intergenic
CTTGTAACGCGAGCATGATC+CGG 0.480182 7.1:-5647484 None:intergenic
GATCGGTTTACAACTCGATC+AGG 0.481839 7.1:+5647159 MS.gene07618:CDS
GTAAGTCTTCCGACCGTGCC+AGG 0.485055 7.1:+5646434 MS.gene07618:CDS
TACTTGGATGGTAAGATCAC+TGG 0.486316 7.1:-5645803 None:intergenic
TCTTCTGCAATTCAATGTCA+AGG 0.497562 7.1:-5646988 None:intergenic
AAGAGCTGAATCATATCTAA+AGG 0.501938 7.1:+5646598 MS.gene07618:CDS
AATAGGTTGATGCTCCTACT+TGG 0.504109 7.1:-5645819 None:intergenic
AACCAGAAACACCCTTAGAT+TGG 0.511015 7.1:+5646816 MS.gene07618:CDS
CTTCTGCAATTCAATGTCAA+GGG 0.515528 7.1:-5646987 None:intergenic
AAACACATCGAACATTATAC+AGG 0.516060 7.1:+5646634 MS.gene07618:CDS
AAAATGGGAGTTGTAACTCT+TGG 0.524005 7.1:+5644735 None:intergenic
CACAATCAAATCTTGTTTGG+TGG 0.524281 7.1:+5648045 MS.gene07618:CDS
ATAGCTGCAAAATTCTGCTA+TGG 0.525366 7.1:+5646476 MS.gene07618:CDS
GAGTATGAATTTGACAGTCC+TGG 0.526590 7.1:+5647343 MS.gene07618:CDS
GCATGTCTTATGCTTGAACT+TGG 0.528359 7.1:-5644798 None:intergenic
TGAATCATATCTAAAGGAAA+CGG 0.538877 7.1:+5646604 MS.gene07618:CDS
GCATAAGACATGCCACTGAA+TGG 0.541068 7.1:+5644808 MS.gene07618:CDS
CATTGATTAGCCTATTAACA+AGG 0.548783 7.1:-5646703 None:intergenic
ATTCACAGTATTCGTGGCAG+TGG 0.549968 7.1:+5648321 MS.gene07618:CDS
TGCATCTACACCACCTGGCA+CGG 0.550474 7.1:-5646447 None:intergenic
TCATCCGAACATTAAGGACT+CGG 0.556784 7.1:+5647870 MS.gene07618:CDS
GTCAATTTCCTCAAAGATCA+GGG 0.559074 7.1:+5648076 MS.gene07618:CDS
AGAAACACCCTTAGATTGGT+GGG 0.561564 7.1:+5646820 MS.gene07618:CDS
GCCATGCCGCACAAAATGAA+AGG 0.570379 7.1:+5647950 MS.gene07618:CDS
ACCGATGCATAGTTATCTCT+AGG 0.575158 7.1:-5648126 None:intergenic
GATTTGAAGAATTTGCGTGC+AGG 0.575709 7.1:-5648258 None:intergenic
TTGAATTGCAGAAGAAACAA+AGG 0.576448 7.1:+5646996 MS.gene07618:CDS
CTAGTCCACAACCACGGTCC+CGG 0.580906 7.1:+5648355 MS.gene07618:CDS
TCCTAGAGATAACTATGCAT+CGG 0.582662 7.1:+5648125 MS.gene07618:CDS
AAGTAACAAGAATGAGAATG+AGG 0.586252 7.1:+5648178 MS.gene07618:CDS
CAGAAACACCCTTAGATTGG+TGG 0.586270 7.1:+5646819 MS.gene07618:CDS
GGTTGATGCTCCTACTTGGA+TGG 0.586634 7.1:-5645815 None:intergenic
CTTGTAGAAGTGATTTGGAG+AGG 0.587525 7.1:+5647134 MS.gene07618:CDS
TGAATTGCAGAAGAAACAAA+GGG 0.588131 7.1:+5646997 MS.gene07618:CDS
GCACTCGAAGGTGAATTCGT+TGG 0.590719 7.1:-5647205 None:intergenic
AGTGATTTGGAGAGGCGGAT+CGG 0.592594 7.1:+5647142 MS.gene07618:CDS
TCTACACCACCTGGCACGGT+CGG 0.595705 7.1:-5646443 None:intergenic
CTTCCACTCCTAGAAACAAG+AGG 0.596628 7.1:-5646365 None:intergenic
GAGTTTCCCCACCAATCTAA+GGG 0.605139 7.1:-5646827 None:intergenic
ATATCGGTTATGAAATCGAA+GGG 0.606291 7.1:+5646887 MS.gene07618:CDS
AGTGATCTTACCATCCAAGT+AGG 0.606850 7.1:+5645805 MS.gene07618:CDS
CTTCGAAATGCGATGAATGG+AGG 0.608119 7.1:+5648021 MS.gene07618:CDS
GTCCTTCTTCCTGAAACACT+AGG 0.612878 7.1:-5644768 None:intergenic
ATGCACATAATTCTCTTCAA+GGG 0.619987 7.1:+5646948 MS.gene07618:CDS
TGAAAAGGAAACCGGGACCG+TGG 0.620189 7.1:-5648366 None:intergenic
TCAAATGCATCTACACCACC+TGG 0.627222 7.1:-5646452 None:intergenic
TATATCGGTTATGAAATCGA+AGG 0.631995 7.1:+5646886 MS.gene07618:CDS
ATCAACCTATTCACTTCACA+AGG 0.635818 7.1:+5645831 MS.gene07618:CDS
TAGCATAGCAATATTCGAGA+GGG 0.638972 7.1:-5646516 None:intergenic
TTTCCTCAAAGATCAGGGAG+TGG 0.639154 7.1:+5648081 MS.gene07618:CDS
AAAATTATAATACCATTCAG+TGG 0.645788 7.1:-5644820 None:intergenic
GAAACACCCTTAGATTGGTG+GGG 0.662827 7.1:+5646821 MS.gene07618:CDS
GTAGAAGTGATTTGGAGAGG+CGG 0.668323 7.1:+5647137 MS.gene07618:CDS
ATAGCATAGCAATATTCGAG+AGG 0.677800 7.1:-5646517 None:intergenic
AGTCTTCCGACCGTGCCAGG+TGG 0.688935 7.1:+5646437 MS.gene07618:CDS
CATGCTCGCGTTACAAGCGA+CGG 0.689890 7.1:+5647490 MS.gene07618:CDS
TTCGTGGCAGTGGAACTGGA+AGG 0.695731 7.1:+5648331 MS.gene07618:CDS
ATTCTGCTATGGAATCAATG+TGG 0.703925 7.1:+5646487 MS.gene07618:CDS
ATTGTGTTGTGAGCACTCGA+AGG 0.726239 7.1:-5647217 None:intergenic
GAAGGTCTAGTCCACAACCA+CGG 0.728361 7.1:+5648349 MS.gene07618:CDS
ACGGTCGGAAGACTTACGCG+CGG 0.751124 7.1:-5646428 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAGTATGATAATAATTGA+TGG - chr7.1:5645358-5645377 None:intergenic 15.0%
!! ATAATTATAACATATCAGAA+TGG - chr7.1:5645874-5645893 None:intergenic 15.0%
!! TTATAATTATACATTCAACA+TGG + chr7.1:5645884-5645903 MS.gene07618:intron 15.0%
!!! AATATTATTTTCTAACGTTA+TGG - chr7.1:5647648-5647667 None:intergenic 15.0%
!!! ACTTTTTTCTTTTTTTTTGA+AGG + chr7.1:5644849-5644868 MS.gene07618:intron 15.0%
!!! ATATTATTTTCTAACGTTAT+GGG - chr7.1:5647647-5647666 None:intergenic 15.0%
!!! CTGTATCAAAATAATATTTT+AGG - chr7.1:5645547-5645566 None:intergenic 15.0%
!!! TCAAAATAATATTTTAGGAA+TGG - chr7.1:5645542-5645561 None:intergenic 15.0%
!!! TTTAAAACCTTTTATACTAA+CGG - chr7.1:5646033-5646052 None:intergenic 15.0%
!!! TTTTTATGTAATGCAATAAA+TGG - chr7.1:5645628-5645647 None:intergenic 15.0%
!! AAAATTATAATACCATTCAG+TGG - chr7.1:5644823-5644842 None:intergenic 20.0%
!! TAATTAATGACTGAAATTGT+TGG + chr7.1:5647829-5647848 MS.gene07618:intron 20.0%
!! TGATAACATACTATATAAGA+TGG - chr7.1:5646200-5646219 None:intergenic 20.0%
!!! ATCATTGATAATGTTTTAGA+AGG - chr7.1:5646794-5646813 None:intergenic 20.0%
!!! ATGATATAGATTCAATTTTG+AGG + chr7.1:5647242-5647261 MS.gene07618:CDS 20.0%
!!! TCTCTGAAAATTTCAATTTT+TGG + chr7.1:5645680-5645699 MS.gene07618:intron 20.0%
!!! TGTTGGTTTATTTATCATAT+AGG + chr7.1:5647846-5647865 MS.gene07618:intron 20.0%
!!! TTAATAGTGTTTTCAATAGA+AGG - chr7.1:5647568-5647587 None:intergenic 20.0%
!!! TTCTAAAACATTATCAATGA+TGG + chr7.1:5646793-5646812 MS.gene07618:CDS 20.0%
! AAACATGAAAGAAATGCTAT+TGG - chr7.1:5647079-5647098 None:intergenic 25.0%
! AACCCATTAATGCAAATAAT+TGG - chr7.1:5645502-5645521 None:intergenic 25.0%
! AAGATATCAACCTTGTTAAT+AGG + chr7.1:5646693-5646712 MS.gene07618:CDS 25.0%
! AATTTCATGAAATCTTGAAG+TGG - chr7.1:5644972-5644991 None:intergenic 25.0%
! ACTCCAATTATTTGCATTAA+TGG + chr7.1:5645496-5645515 MS.gene07618:intron 25.0%
! AGAATTCTCAGAAAAGAATT+TGG + chr7.1:5646571-5646590 MS.gene07618:CDS 25.0%
! ATTAGTTCATCAACCATAAT+AGG - chr7.1:5645101-5645120 None:intergenic 25.0%
! CTCCAATTATTTGCATTAAT+GGG + chr7.1:5645497-5645516 MS.gene07618:intron 25.0%
! GAGAAAATTGTCAAGTAATT+TGG - chr7.1:5647401-5647420 None:intergenic 25.0%
! TGAATCATATCTAAAGGAAA+CGG + chr7.1:5646604-5646623 MS.gene07618:CDS 25.0%
! TTCTTTACTACGAACAAATA+AGG + chr7.1:5647998-5648017 MS.gene07618:CDS 25.0%
! TTGCATTTCCAAATTCATTT+AGG - chr7.1:5645395-5645414 None:intergenic 25.0%
!! AAACTTAAGTAACCATTTTG+AGG + chr7.1:5645573-5645592 MS.gene07618:intron 25.0%
!! ATCTTAATTTTCCAATCTCA+AGG - chr7.1:5645227-5645246 None:intergenic 25.0%
!!! CATACTATTGTTTTAGCTTT+TGG + chr7.1:5645369-5645388 MS.gene07618:intron 25.0%
!!! CTTTTCTACTTTTCTGAATT+TGG + chr7.1:5647267-5647286 MS.gene07618:CDS 25.0%
!!! TTGCTTTGATTTGTAAAGAA+AGG + chr7.1:5647799-5647818 MS.gene07618:intron 25.0%
AAACACATCGAACATTATAC+AGG + chr7.1:5646634-5646653 MS.gene07618:CDS 30.0%
AAAGCAAAGCTCAATTCTTA+AGG + chr7.1:5647372-5647391 MS.gene07618:CDS 30.0%
AACTTCTTGTAGAAGTGATT+TGG + chr7.1:5647129-5647148 MS.gene07618:CDS 30.0%
AAGAGCTGAATCATATCTAA+AGG + chr7.1:5646598-5646617 MS.gene07618:CDS 30.0%
AAGTAACAAGAATGAGAATG+AGG + chr7.1:5648178-5648197 MS.gene07618:CDS 30.0%
ATAGCAAAACTACATTTGAC+AGG - chr7.1:5646235-5646254 None:intergenic 30.0%
ATCATGTCATTGTTTGGTAA+AGG - chr7.1:5645273-5645292 None:intergenic 30.0%
ATGCACATAATTCTCTTCAA+GGG + chr7.1:5646948-5646967 MS.gene07618:CDS 30.0%
ATGGTGCAATAATAAGACAT+TGG - chr7.1:5645609-5645628 None:intergenic 30.0%
ATTTACCTTGTGAAGTGAAT+AGG - chr7.1:5645839-5645858 None:intergenic 30.0%
CCAAAAAAATTGTCCATTGT+CGG - chr7.1:5645424-5645443 None:intergenic 30.0%
CTACGTGTATATAATGATTC+AGG + chr7.1:5645745-5645764 MS.gene07618:intron 30.0%
GACATGAAAATTTCAAAGCA+TGG - chr7.1:5645726-5645745 None:intergenic 30.0%
GTATAATGTTCGATGTGTTT+GGG - chr7.1:5646634-5646653 None:intergenic 30.0%
TATGCACATAATTCTCTTCA+AGG + chr7.1:5646947-5646966 MS.gene07618:CDS 30.0%
TGAATTGCAGAAGAAACAAA+GGG + chr7.1:5646997-5647016 MS.gene07618:CDS 30.0%
TGATACACCGTTAGTATAAA+AGG + chr7.1:5646023-5646042 MS.gene07618:intron 30.0%
TGTATAATGTTCGATGTGTT+TGG - chr7.1:5646635-5646654 None:intergenic 30.0%
TTAAGAATTGAGCTTTGCTT+TGG - chr7.1:5647373-5647392 None:intergenic 30.0%
TTGAATTGCAGAAGAAACAA+AGG + chr7.1:5646996-5647015 MS.gene07618:CDS 30.0%
TTTCATATAGCTAACAGATG+AGG - chr7.1:5645318-5645337 None:intergenic 30.0%
TTTCTTCGAACGAGTTATAT+CGG + chr7.1:5646871-5646890 MS.gene07618:CDS 30.0%
! AAGGAACAAGATTTTCACAA+TGG - chr7.1:5646667-5646686 None:intergenic 30.0%
! ATATCGGTTATGAAATCGAA+GGG + chr7.1:5646887-5646906 MS.gene07618:CDS 30.0%
! CATGTTTCTGAATAACTTCT+AGG - chr7.1:5644917-5644936 None:intergenic 30.0%
! GAATGGCTATTTCAATATAG+TGG - chr7.1:5645525-5645544 None:intergenic 30.0%
! TATATCGGTTATGAAATCGA+AGG + chr7.1:5646886-5646905 MS.gene07618:CDS 30.0%
!! AATCAATTGTTTTGCTTAGG+CGG - chr7.1:5647903-5647922 None:intergenic 30.0%
!! AGAGTTGATCAGCAAAATTT+TGG + chr7.1:5646919-5646938 MS.gene07618:CDS 30.0%
!! AGGTTGATATCTTCTGATAA+AGG - chr7.1:5646686-5646705 None:intergenic 30.0%
!! CATTGATTAGCCTATTAACA+AGG - chr7.1:5646706-5646725 None:intergenic 30.0%
!! GACAATCAATTGTTTTGCTT+AGG - chr7.1:5647906-5647925 None:intergenic 30.0%
!! TTCTCTTTTGAAAAGGAAAC+CGG - chr7.1:5648377-5648396 None:intergenic 30.0%
!!! GATTTTGAGTTCTAACCTTA+AGG - chr7.1:5647540-5647559 None:intergenic 30.0%
ACGAAATACCAACACAAACA+CGG + chr7.1:5645126-5645145 MS.gene07618:intron 35.0%
ACTTGTACACCTATTTGAAC+TGG - chr7.1:5647979-5647998 None:intergenic 35.0%
ATAGCATAGCAATATTCGAG+AGG - chr7.1:5646520-5646539 None:intergenic 35.0%
ATAGCTGCAAAATTCTGCTA+TGG + chr7.1:5646476-5646495 MS.gene07618:CDS 35.0%
ATAGGTTCATCCGAACATTA+AGG + chr7.1:5647864-5647883 MS.gene07618:intron 35.0%
ATCAACCTATTCACTTCACA+AGG + chr7.1:5645831-5645850 MS.gene07618:CDS 35.0%
ATTCTGCTATGGAATCAATG+TGG + chr7.1:5646487-5646506 MS.gene07618:CDS 35.0%
CAACCATAATAGGATCTGAA+GGG - chr7.1:5645091-5645110 None:intergenic 35.0%
CTAGAAACAAGAGGAAACTA+GGG - chr7.1:5646359-5646378 None:intergenic 35.0%
CTTCTGCAATTCAATGTCAA+GGG - chr7.1:5646990-5647009 None:intergenic 35.0%
GAAAATTTCAAAGCATGGCA+AGG - chr7.1:5645721-5645740 None:intergenic 35.0%
GAGAATGAGGTTGAATGATT+TGG + chr7.1:5648191-5648210 MS.gene07618:CDS 35.0%
GGACACAATCAAATCTTGTT+TGG + chr7.1:5648042-5648061 MS.gene07618:CDS 35.0%
GGATAAGAATAGCCTCAAAA+TGG - chr7.1:5645588-5645607 None:intergenic 35.0%
GTCAATTTCCTCAAAGATCA+GGG + chr7.1:5648076-5648095 MS.gene07618:CDS 35.0%
TAGCATAGCAATATTCGAGA+GGG - chr7.1:5646519-5646538 None:intergenic 35.0%
TCAACCATAATAGGATCTGA+AGG - chr7.1:5645092-5645111 None:intergenic 35.0%
TCCTAGAGATAACTATGCAT+CGG + chr7.1:5648125-5648144 MS.gene07618:CDS 35.0%
TCTTCTGCAATTCAATGTCA+AGG - chr7.1:5646991-5647010 None:intergenic 35.0%
TTTGGTAAAGGACTACATCA+AGG - chr7.1:5645261-5645280 None:intergenic 35.0%
! ACATGATGCTCGATTTTGAA+TGG + chr7.1:5645286-5645305 MS.gene07618:intron 35.0%
! ACATTCAACATGGTTTTCTC+TGG + chr7.1:5645894-5645913 MS.gene07618:intron 35.0%
! ATCTTGTTTGGTGGTATTCA+TGG + chr7.1:5648054-5648073 MS.gene07618:CDS 35.0%
! CACAATCAAATCTTGTTTGG+TGG + chr7.1:5648045-5648064 MS.gene07618:CDS 35.0%
! GCAAGTGCTATGAATTTTGA+TGG - chr7.1:5647454-5647473 None:intergenic 35.0%
! GCTTTTGGCCTAAATGAATT+TGG + chr7.1:5645384-5645403 MS.gene07618:intron 35.0%
! GTCTTATTGAGTTCGAGTTT+GGG + chr7.1:5645019-5645038 MS.gene07618:intron 35.0%
! TACTTTTCTGAATTTGGACG+AGG + chr7.1:5647273-5647292 MS.gene07618:CDS 35.0%
! TCTGGTTTACATTCCAAGTT+AGG + chr7.1:5645912-5645931 MS.gene07618:intron 35.0%
! TCTTATTGAGTTCGAGTTTG+GGG + chr7.1:5645020-5645039 MS.gene07618:intron 35.0%
! TGTTTGTGTTGGTATTTCGT+AGG - chr7.1:5645126-5645145 None:intergenic 35.0%
! TTTCTAGGAGTGGAAGATTT+AGG + chr7.1:5646372-5646391 MS.gene07618:CDS 35.0%
!! AGTCTTATTGAGTTCGAGTT+TGG + chr7.1:5645018-5645037 MS.gene07618:intron 35.0%
!! TCTCTTTTGAAAAGGAAACC+GGG - chr7.1:5648376-5648395 None:intergenic 35.0%
!!! CCGACAATGGACAATTTTTT+TGG + chr7.1:5645421-5645440 MS.gene07618:intron 35.0%
AACCAGAAACACCCTTAGAT+TGG + chr7.1:5646816-5646835 MS.gene07618:CDS 40.0%
ACCGATGCATAGTTATCTCT+AGG - chr7.1:5648129-5648148 None:intergenic 40.0%
AGAAACACCCTTAGATTGGT+GGG + chr7.1:5646820-5646839 MS.gene07618:CDS 40.0%
AGCTGTTGACATCTTCCTTA+AGG + chr7.1:5647522-5647541 MS.gene07618:CDS 40.0%
AGTGATCTTACCATCCAAGT+AGG + chr7.1:5645805-5645824 MS.gene07618:CDS 40.0%
ATCAATGTCCGTGTTTGTGT+TGG - chr7.1:5645137-5645156 None:intergenic 40.0%
CCTAGAAACAAGAGGAAACT+AGG - chr7.1:5646360-5646379 None:intergenic 40.0%
CTATTCATTGCCACCTAACT+TGG - chr7.1:5645928-5645947 None:intergenic 40.0%
GAAAGGCTACCAGTTCAAAT+AGG + chr7.1:5647967-5647986 MS.gene07618:CDS 40.0%
GAATTGAAGCCTAGTGTTTC+AGG + chr7.1:5644759-5644778 MS.gene07618:CDS 40.0%
GAGTATGAATTTGACAGTCC+TGG + chr7.1:5647343-5647362 MS.gene07618:CDS 40.0%
GATTTGAAGAATTTGCGTGC+AGG - chr7.1:5648261-5648280 None:intergenic 40.0%
GCATGTCTTATGCTTGAACT+TGG - chr7.1:5644801-5644820 None:intergenic 40.0%
GCTTACTACCAACTCAATCT+AGG + chr7.1:5647041-5647060 MS.gene07618:CDS 40.0%
GGTCAATTTCCTCAAAGATC+AGG + chr7.1:5648075-5648094 MS.gene07618:CDS 40.0%
GGTTTACATTCCAAGTTAGG+TGG + chr7.1:5645915-5645934 MS.gene07618:intron 40.0%
GTTAGGTGGCAATGAATAGT+TGG + chr7.1:5645929-5645948 MS.gene07618:intron 40.0%
GTTATTGGACACCTTGAGAT+TGG + chr7.1:5645213-5645232 MS.gene07618:intron 40.0%
TACTTGGATGGTAAGATCAC+TGG - chr7.1:5645806-5645825 None:intergenic 40.0%
TCACTGGAGACATCAGATAT+TGG - chr7.1:5645790-5645809 None:intergenic 40.0%
TCATCCGAACATTAAGGACT+CGG + chr7.1:5647870-5647889 MS.gene07618:CDS 40.0%
TCGAGCATCATGTCATTGTT+TGG - chr7.1:5645279-5645298 None:intergenic 40.0%
TGCAAAGAGCAACTAACTTC+TGG + chr7.1:5646743-5646762 MS.gene07618:CDS 40.0%
TGCCACGAATACTGTGAATA+CGG - chr7.1:5648320-5648339 None:intergenic 40.0%
TTCCGTATTCACAGTATTCG+TGG + chr7.1:5648315-5648334 MS.gene07618:CDS 40.0%
! CCAAGAGCTCAAAAGCATAA+TGG - chr7.1:5646269-5646288 None:intergenic 40.0%
! CCATTATGCTTTTGAGCTCT+TGG + chr7.1:5646266-5646285 MS.gene07618:intron 40.0%
! CCTAGTTTCCTCTTGTTTCT+AGG + chr7.1:5646357-5646376 MS.gene07618:intron 40.0%
! CTTATTGAGTTCGAGTTTGG+GGG + chr7.1:5645021-5645040 MS.gene07618:intron 40.0%
! CTTGTAGAAGTGATTTGGAG+AGG + chr7.1:5647134-5647153 MS.gene07618:CDS 40.0%
! GAGCTTTTCCTAGATTGAGT+TGG - chr7.1:5647052-5647071 None:intergenic 40.0%
! TGGTAGCCTTTCATTTTGTG+CGG - chr7.1:5647959-5647978 None:intergenic 40.0%
! TGTTAGTGTCGTGTCGTTAT+TGG + chr7.1:5645198-5645217 MS.gene07618:intron 40.0%
! TTATGCTTTTGAGCTCTTGG+TGG + chr7.1:5646269-5646288 MS.gene07618:intron 40.0%
! TTTTCTGAATTTGGACGAGG+TGG + chr7.1:5647276-5647295 MS.gene07618:CDS 40.0%
!! AATAGGTTGATGCTCCTACT+TGG - chr7.1:5645822-5645841 None:intergenic 40.0%
!! TTTCCTCTTGTTTCTAGGAG+TGG + chr7.1:5646362-5646381 MS.gene07618:CDS 40.0%
!!! CAGGAAGAGTCTTTTTTTGC+AGG + chr7.1:5645764-5645783 MS.gene07618:intron 40.0%
AATGCAAAGCTCACCGACAA+TGG + chr7.1:5645408-5645427 MS.gene07618:intron 45.0%
AGAGTTGAATCAGTGTGTCG+CGG - chr7.1:5647777-5647796 None:intergenic 45.0%
AGAGTTTCCCCACCAATCTA+AGG - chr7.1:5646831-5646850 None:intergenic 45.0%
AGCACTTGCAGAACTACTTC+CGG + chr7.1:5647465-5647484 MS.gene07618:CDS 45.0%
AGCCTAGTGTTTCAGGAAGA+AGG + chr7.1:5644766-5644785 MS.gene07618:CDS 45.0%
AGGCTTCGAAATGCGATGAA+TGG + chr7.1:5648018-5648037 MS.gene07618:CDS 45.0%
ATACCACTCCCTGATCTTTG+AGG - chr7.1:5648087-5648106 None:intergenic 45.0%
ATTCACAGTATTCGTGGCAG+TGG + chr7.1:5648321-5648340 MS.gene07618:CDS 45.0%
ATTGGAGTTTCACGCTAGCA+TGG - chr7.1:5645484-5645503 None:intergenic 45.0%
ATTGTGTTGTGAGCACTCGA+AGG - chr7.1:5647220-5647239 None:intergenic 45.0%
CAAAGATCAGGGAGTGGTAT+AGG + chr7.1:5648087-5648106 MS.gene07618:CDS 45.0%
CAGAAACACCCTTAGATTGG+TGG + chr7.1:5646819-5646838 MS.gene07618:CDS 45.0%
CCATAATAGGATCTGAAGGG+AGG - chr7.1:5645088-5645107 None:intergenic 45.0%
CCTCCCTTCAGATCCTATTA+TGG + chr7.1:5645085-5645104 MS.gene07618:intron 45.0%
CTTCCACTCCTAGAAACAAG+AGG - chr7.1:5646368-5646387 None:intergenic 45.0%
CTTCGAAATGCGATGAATGG+AGG + chr7.1:5648021-5648040 MS.gene07618:CDS 45.0%
GAAACACCCTTAGATTGGTG+GGG + chr7.1:5646821-5646840 MS.gene07618:CDS 45.0%
GAGTTTCCCCACCAATCTAA+GGG - chr7.1:5646830-5646849 None:intergenic 45.0%
GCATAAGACATGCCACTGAA+TGG + chr7.1:5644808-5644827 MS.gene07618:CDS 45.0%
GTCCTTCTTCCTGAAACACT+AGG - chr7.1:5644771-5644790 None:intergenic 45.0%
TCAAATGCATCTACACCACC+TGG - chr7.1:5646455-5646474 None:intergenic 45.0%
TTTCCTCAAAGATCAGGGAG+TGG + chr7.1:5648081-5648100 MS.gene07618:CDS 45.0%
! GATCGGTTTACAACTCGATC+AGG + chr7.1:5647159-5647178 MS.gene07618:CDS 45.0%
! GTAGAAGTGATTTGGAGAGG+CGG + chr7.1:5647137-5647156 MS.gene07618:CDS 45.0%
!! CACCAATCTAAGGGTGTTTC+TGG - chr7.1:5646821-5646840 None:intergenic 45.0%
AGTATTCGTGGCAGTGGAAC+TGG + chr7.1:5648327-5648346 MS.gene07618:CDS 50.0%
CGCTCCGAGTCCTTAATGTT+CGG - chr7.1:5647877-5647896 None:intergenic 50.0%
CTTGTAACGCGAGCATGATC+CGG - chr7.1:5647487-5647506 None:intergenic 50.0%
GAAGGTCTAGTCCACAACCA+CGG + chr7.1:5648349-5648368 MS.gene07618:CDS 50.0%
GCACTCGAAGGTGAATTCGT+TGG - chr7.1:5647208-5647227 None:intergenic 50.0%
GCCATGCCGCACAAAATGAA+AGG + chr7.1:5647950-5647969 MS.gene07618:CDS 50.0%
TCAGGGAGTGGTATAGGAAG+TGG + chr7.1:5648093-5648112 MS.gene07618:CDS 50.0%
! AGTGATTTGGAGAGGCGGAT+CGG + chr7.1:5647142-5647161 MS.gene07618:CDS 50.0%
! GCCTTTCATTTTGTGCGGCA+TGG - chr7.1:5647954-5647973 None:intergenic 50.0%
! GGTTGATGCTCCTACTTGGA+TGG - chr7.1:5645818-5645837 None:intergenic 50.0%
!! GAGCTTTGCTTTGGAGATCC+AGG - chr7.1:5647364-5647383 None:intergenic 50.0%
CATGCTCGCGTTACAAGCGA+CGG + chr7.1:5647490-5647509 MS.gene07618:CDS 55.0%
TGAAAAGGAAACCGGGACCG+TGG - chr7.1:5648369-5648388 None:intergenic 55.0%
TGCATCTACACCACCTGGCA+CGG - chr7.1:5646450-5646469 None:intergenic 55.0%
TTCGTGGCAGTGGAACTGGA+AGG + chr7.1:5648331-5648350 MS.gene07618:CDS 55.0%
ACGGTCGGAAGACTTACGCG+CGG - chr7.1:5646431-5646450 None:intergenic 60.0%
ATCAGTGTGTCGCGGCAGCA+AGG - chr7.1:5647769-5647788 None:intergenic 60.0%
CTAGTCCACAACCACGGTCC+CGG + chr7.1:5648355-5648374 MS.gene07618:CDS 60.0%
GTAAGTCTTCCGACCGTGCC+AGG + chr7.1:5646434-5646453 MS.gene07618:CDS 60.0%
TCTACACCACCTGGCACGGT+CGG - chr7.1:5646446-5646465 None:intergenic 60.0%
AGTCTTCCGACCGTGCCAGG+TGG + chr7.1:5646437-5646456 MS.gene07618:CDS 65.0%
GGAAACCGGGACCGTGGTTG+TGG - chr7.1:5648363-5648382 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 5644738 5648397 5644738 ID=MS.gene07618
chr7.1 mRNA 5644738 5648397 5644738 ID=MS.gene07618.t1;Parent=MS.gene07618
chr7.1 exon 5644738 5644829 5644738 ID=MS.gene07618.t1.exon1;Parent=MS.gene07618.t1
chr7.1 CDS 5644738 5644829 5644738 ID=cds.MS.gene07618.t1;Parent=MS.gene07618.t1
chr7.1 exon 5645786 5645852 5645786 ID=MS.gene07618.t1.exon2;Parent=MS.gene07618.t1
chr7.1 CDS 5645786 5645852 5645786 ID=cds.MS.gene07618.t1;Parent=MS.gene07618.t1
chr7.1 exon 5646362 5647543 5646362 ID=MS.gene07618.t1.exon3;Parent=MS.gene07618.t1
chr7.1 CDS 5646362 5647543 5646362 ID=cds.MS.gene07618.t1;Parent=MS.gene07618.t1
chr7.1 exon 5647868 5648397 5647868 ID=MS.gene07618.t1.exon4;Parent=MS.gene07618.t1
chr7.1 CDS 5647868 5648397 5647868 ID=cds.MS.gene07618.t1;Parent=MS.gene07618.t1
Gene Sequence

>MS.gene07618

ATGGGAGTTGTAACTCTTGGTGAATTGAAGCCTAGTGTTTCAGGAAGAAGGACTTTTCGTCCAAGTTCAAGCATAAGACATGCCACTGAATGGTATTATAATTTTCTTACTACTTTTTTCTTTTTTTTTGAAGGATTCTTACTACTTCTAGAAGTTTTTATTTATTTACACATATTCCTAGAAGTTATTCAGAAACATGCAAGTGTCTAAGTCTGTCTCATATCTATAATACCACTTCAAGATTTCATGAAATTCAACAATACTTGAATGAGCTGACACAAGTCTTATTGAGTTCGAGTTTGGGGGTCTTACACAACATCAACGTTAAAGCTCTTGAGATAGCTATACCTCCCTTCAGATCCTATTATGGTTGATGAACTAATTTCCTACGAAATACCAACACAAACACGGACATTGATAACAATTTAAGAAAATGAACGTAGTCAAATATAACTAATCGTGTTAGTGTCGTGTCGTTATTGGACACCTTGAGATTGGAAAATTAAGATGTAAAATTTGACCTTGATGTAGTCCTTTACCAAACAATGACATGATGCTCGATTTTGAATGGTTTAGACCTCATCTGTTAGCTATATGAAACAATTGATGTTTTTCATCCATCAATTATTATCATACTATTGTTTTAGCTTTTGGCCTAAATGAATTTGGAAATGCAAAGCTCACCGACAATGGACAATTTTTTTGGCTTCACATAGAACATGACAACTGTGAAATCAACTTGACCATGCTAGCGTGAAACTCCAATTATTTGCATTAATGGGTTCCACTATATTGAAATAGCCATTCCTAAAATATTATTTTGATACAGAAATCAAAACTTAAGTAACCATTTTGAGGCTATTCTTATCCAATGTCTTATTATTGCACCATTTATTGCATTACATAAAAAATATATGCTAATAGAGTAGTCTCTTTCAAATGTCTCTGAAAATTTCAATTTTTGGTAATAATAATGTACGCCTTGCCATGCTTTGAAATTTTCATGTCTACGTGTATATAATGATTCAGGAAGAGTCTTTTTTTGCAGGCCAATATCTGATGTCTCCAGTGATCTTACCATCCAAGTAGGAGCATCAACCTATTCACTTCACAAGGTAAATTAAAACAATCTTCCATTCTGATATGTTATAATTATACATTCAACATGGTTTTCTCTGGTTTACATTCCAAGTTAGGTGGCAATGAATAGTTGGCAATTTTCTAAGTAGATCATTATAATTTTGCTATGAACATACATAGTTAATTAATTTTATGAGTTTAATTTTGATACACCGTTAGTATAAAAGGTTTTAAATCGTCAACAAATCACAAACAATCATATCTGTGACTTAAGAAATAGTTGTGATTAATAAAATCAAACATTTTTAATGATCAGACGATAATGATTGATTGACAACGTAAAAAAAATCTTTATAATGATACTGTATATGAATTCAATCCATCTTATATAGTATGTTATCAGCAGATAATTTTCCTGTCAAATGTAGTTTTGCTATATGTGTAGTTTCCATTATGCTTTTGAGCTCTTGGTGGCTTCTTTTCATGCATCATTATGCATATTTTCTCACTACTTTGTACTTAAACTCTTGTTATTTTTCCCTAGTTTCCTCTTGTTTCTAGGAGTGGAAGATTTAGGAAGCTGCTATCTGAATCAAAAGATTCTAAAGTTCCGCGCGTAAGTCTTCCGACCGTGCCAGGTGGTGTAGATGCATTTGAAATAGCTGCAAAATTCTGCTATGGAATCAATGTGGAATTCACCCTCTCGAATATTGCTATGCTATATTGTATATCTCATTTTCTTGAAATGACAGAAGAATTCTCAGAAAAGAATTTGGTGACAAGAGCTGAATCATATCTAAAGGAAACGGTACTCCCAAACACATCGAACATTATACAGGTTCTTCACCATTGTGAAAATCTTGTTCCTTTATCAGAAGATATCAACCTTGTTAATAGGCTAATCAATGCAATTGCAAATAATGCATGCAAAGAGCAACTAACTTCTGGTTTGTTAAAACTTGATCACAACTTTCCTTCTAAAACATTATCAATGATGGAACCAGAAACACCCTTAGATTGGTGGGGAAACTCTTTCAACGTTCTTAGTCTTGATTTCTTCGAACGAGTTATATCGGTTATGAAATCGAAGGGATTAACACAAGAGTTGATCAGCAAAATTTTGGTAAACTATGCACATAATTCTCTTCAAGGGACTAGTAGTGTTAGTTCCCTTGACATTGAATTGCAGAAGAAACAAAGGGTCATTGTTGAAACTATAGTTCGCTTACTACCAACTCAATCTAGGAAAAGCTCAGTTCCAATAGCATTTCTTTCATGTTTATTGAAAACTGCAATAGCAACATTAGTATCAACTTCTTGTAGAAGTGATTTGGAGAGGCGGATCGGTTTACAACTCGATCAGGCAATTCTTGAAGACATACTTATTCCAACGAATTCACCTTCGAGTGCTCACAACACAATGTATGATATAGATTCAATTTTGAGGATCTTTTCTACTTTTCTGAATTTGGACGAGGTGGATGATGAAGACAGTGACTTCAGAGATGAAAATCAAATGATGTATGAGTATGAATTTGACAGTCCTGGATCTCCAAAGCAAAGCTCAATTCTTAAGGTATCCAAATTACTTGACAATTTTCTCGCTGAAGTAGCACTAGACTCAAACTTGTTGCCATCAAAATTCATAGCACTTGCAGAACTACTTCCGGATCATGCTCGCGTTACAAGCGACGGACTCTATCGAGCTGTTGACATCTTCCTTAAGGTTAGAACTCAAAATCGAGTTCCTTCTATTGAAAACACTATTAAGAATTTCATTACTCTTCTGTTTTATAAAAATGATTTACACATACGTTTATTTATAGCCCATAACGTTAGAAAATAATATTATGACACAACAAGAGAGTAAAATATGATTGTAAGTCTGTGTAAGAATTTTGACAGTGTGATTGCATTATTGCATACTCATTAAACTCTTAACTAAGTGCCTTGCTGCCGCGACACACTGATTCAACTCTTGTTGCTTTGATTTGTAAAGAAAGGAAAATATTAATTAATGACTGAAATTGTTGGTTTATTTATCATATAGGTTCATCCGAACATTAAGGACTCGGAGCGATACCGCCTAAGCAAAACAATTGATTGTCAGAAACTATCTCAAGAAGCATGCAGCCATGCCGCACAAAATGAAAGGCTACCAGTTCAAATAGGTGTACAAGTTCTTTACTACGAACAAATAAGGCTTCGAAATGCGATGAATGGAGGACACAATCAAATCTTGTTTGGTGGTATTCATGGTCAATTTCCTCAAAGATCAGGGAGTGGTATAGGAAGTGGAGCAATTTCTCCTAGAGATAACTATGCATCGGTAAGAAGAGAGAATCGAGAGCTGAAGCTTGAAGTAACAAGAATGAGAATGAGGTTGAATGATTTGGAGAAAGATCATGTTTCTATGAAGCAAGAGCTTGTGAAGACACATCCTGCACGCAAATTCTTCAAATCATTTGCTCAAAAATTAAGAAAGTTCAATGCTCTATTCCGTATTCACAGTATTCGTGGCAGTGGAACTGGAAGGTCTAGTCCACAACCACGGTCCCGGTTTCCTTTTCAAAAGAGAAG
Protein sequence

>MS.gene07618.t1

MGVVTLGELKPSVSGRRTFRPSSSIRHATEWPISDVSSDLTIQVGASTYSLHKFPLVSRSGRFRKLLSESKDSKVPRVSLPTVPGGVDAFEIAAKFCYGINVEFTLSNIAMLYCISHFLEMTEEFSEKNLVTRAESYLKETVLPNTSNIIQVLHHCENLVPLSEDINLVNRLINAIANNACKEQLTSGLLKLDHNFPSKTLSMMEPETPLDWWGNSFNVLSLDFFERVISVMKSKGLTQELISKILVNYAHNSLQGTSSVSSLDIELQKKQRVIVETIVRLLPTQSRKSSVPIAFLSCLLKTAIATLVSTSCRSDLERRIGLQLDQAILEDILIPTNSPSSAHNTMYDIDSILRIFSTFLNLDEVDDEDSDFRDENQMMYEYEFDSPGSPKQSSILKVSKLLDNFLAEVALDSNLLPSKFIALAELLPDHARVTSDGLYRAVDIFLKVHPNIKDSERYRLSKTIDCQKLSQEACSHAAQNERLPVQIGVQVLYYEQIRLRNAMNGGHNQILFGGIHGQFPQRSGSGIGSGAISPRDNYASVRRENRELKLEVTRMRMRLNDLEKDHVSMKQELVKTHPARKFFKSFAQKLRKFNALFRIHSIRGSGTGRSSPQPRSRFPFQKR